Query 027388
Match_columns 224
No_of_seqs 153 out of 2448
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 15:13:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027388.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027388hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ri5_A MRNA capping enzyme; me 99.9 1.3E-21 4.5E-26 157.4 17.2 144 62-217 42-185 (298)
2 4gek_A TRNA (CMO5U34)-methyltr 99.9 3.3E-21 1.1E-25 152.6 17.0 108 81-205 67-177 (261)
3 2ex4_A Adrenal gland protein A 99.9 8E-22 2.7E-26 154.4 9.3 123 84-222 79-218 (241)
4 3dtn_A Putative methyltransfer 99.9 8E-21 2.8E-25 147.9 14.6 143 34-206 4-148 (234)
5 4htf_A S-adenosylmethionine-de 99.8 1E-20 3.5E-25 151.6 13.6 152 33-208 23-175 (285)
6 1xtp_A LMAJ004091AAA; SGPP, st 99.8 5.5E-20 1.9E-24 144.7 17.6 134 71-222 80-231 (254)
7 3h2b_A SAM-dependent methyltra 99.8 5.9E-21 2E-25 145.5 11.6 155 34-222 3-175 (203)
8 1pjz_A Thiopurine S-methyltran 99.8 1.5E-20 5E-25 143.7 12.2 128 69-204 7-138 (203)
9 3e23_A Uncharacterized protein 99.8 5E-20 1.7E-24 141.2 15.0 148 33-222 10-175 (211)
10 2p7i_A Hypothetical protein; p 99.8 2.4E-20 8.4E-25 145.9 13.1 138 34-210 7-145 (250)
11 3l8d_A Methyltransferase; stru 99.8 3E-20 1E-24 145.2 13.4 156 34-222 14-193 (242)
12 3hnr_A Probable methyltransfer 99.8 9.8E-20 3.3E-24 140.3 15.2 142 37-208 6-147 (220)
13 2vdw_A Vaccinia virus capping 99.8 1.7E-20 5.9E-25 151.6 10.7 142 67-217 24-180 (302)
14 3g5l_A Putative S-adenosylmeth 99.8 5.7E-20 2E-24 144.7 13.0 105 82-207 42-146 (253)
15 3bus_A REBM, methyltransferase 99.8 1.2E-19 4.2E-24 144.3 14.9 118 72-206 49-166 (273)
16 3dlc_A Putative S-adenosyl-L-m 99.8 1.7E-19 5.8E-24 138.5 15.0 115 74-206 34-148 (219)
17 3bgv_A MRNA CAP guanine-N7 met 99.8 1E-19 3.5E-24 147.7 14.3 156 62-219 5-168 (313)
18 3ou2_A SAM-dependent methyltra 99.8 2.8E-19 9.5E-24 137.4 16.0 138 34-207 9-147 (218)
19 1nkv_A Hypothetical protein YJ 99.8 5.7E-20 1.9E-24 144.8 12.4 132 73-222 25-180 (256)
20 3kkz_A Uncharacterized protein 99.8 2E-19 6.8E-24 142.8 15.2 123 82-222 44-189 (267)
21 4hg2_A Methyltransferase type 99.8 3.6E-20 1.2E-24 146.3 10.5 128 37-206 8-135 (257)
22 3ujc_A Phosphoethanolamine N-m 99.8 3.9E-19 1.3E-23 140.6 15.0 131 74-222 45-199 (266)
23 2o57_A Putative sarcosine dime 99.8 2.5E-19 8.6E-24 144.3 14.0 119 72-207 66-188 (297)
24 1y8c_A S-adenosylmethionine-de 99.8 6.5E-19 2.2E-23 137.6 16.0 144 39-210 2-146 (246)
25 3f4k_A Putative methyltransfer 99.8 4.7E-19 1.6E-23 139.6 14.6 124 81-222 43-189 (257)
26 3bkw_A MLL3908 protein, S-aden 99.8 3.6E-19 1.2E-23 139.1 13.3 107 81-208 40-146 (243)
27 3e8s_A Putative SAM dependent 99.8 4.1E-19 1.4E-23 137.1 13.5 143 34-207 11-153 (227)
28 1vl5_A Unknown conserved prote 99.8 4E-19 1.4E-23 140.5 13.5 111 76-205 29-139 (260)
29 3dh0_A SAM dependent methyltra 99.8 4.6E-19 1.6E-23 136.4 13.6 129 76-222 29-174 (219)
30 3jwh_A HEN1; methyltransferase 99.8 2.5E-18 8.4E-23 132.4 17.0 115 76-205 21-140 (217)
31 2a14_A Indolethylamine N-methy 99.8 6E-19 2E-23 139.9 13.0 152 69-222 37-231 (263)
32 2yqz_A Hypothetical protein TT 99.8 1.2E-18 4E-23 137.7 14.5 137 38-205 3-140 (263)
33 2gb4_A Thiopurine S-methyltran 99.8 1.8E-18 6.2E-23 136.2 14.8 116 83-205 67-190 (252)
34 3pfg_A N-methyltransferase; N, 99.8 1.2E-18 4.2E-23 137.8 13.9 101 83-205 49-150 (263)
35 4fsd_A Arsenic methyltransfera 99.8 4.9E-19 1.7E-23 147.7 11.9 129 82-222 81-244 (383)
36 3thr_A Glycine N-methyltransfe 99.8 3.9E-18 1.3E-22 137.0 16.7 129 79-215 52-184 (293)
37 3hem_A Cyclopropane-fatty-acyl 99.8 2.2E-18 7.6E-23 139.2 15.2 119 73-207 61-184 (302)
38 2gs9_A Hypothetical protein TT 99.8 2.8E-19 9.6E-24 137.0 9.4 103 84-212 36-138 (211)
39 3jwg_A HEN1, methyltransferase 99.8 3E-18 1E-22 132.0 14.9 112 79-205 24-140 (219)
40 3dli_A Methyltransferase; PSI- 99.8 1.2E-18 4.1E-23 136.1 12.8 103 82-209 39-143 (240)
41 1kpg_A CFA synthase;, cyclopro 99.8 2.9E-18 9.8E-23 137.4 14.5 116 74-207 54-169 (287)
42 3vc1_A Geranyl diphosphate 2-C 99.8 2E-18 6.7E-23 140.1 13.5 107 82-206 115-221 (312)
43 3gu3_A Methyltransferase; alph 99.8 2E-18 6.9E-23 138.3 13.1 108 81-208 19-128 (284)
44 3lcc_A Putative methyl chlorid 99.8 1.7E-18 5.8E-23 134.8 12.3 122 84-222 66-200 (235)
45 3d2l_A SAM-dependent methyltra 99.8 1.6E-18 5.5E-23 135.3 12.2 115 83-216 32-147 (243)
46 1wzn_A SAM-dependent methyltra 99.8 2.6E-18 8.8E-23 135.1 13.1 120 70-208 27-147 (252)
47 2avn_A Ubiquinone/menaquinone 99.8 1.2E-17 4.1E-22 132.1 17.0 143 34-211 15-157 (260)
48 3ege_A Putative methyltransfer 99.8 6.3E-19 2.1E-23 139.6 9.6 129 39-208 4-132 (261)
49 3ofk_A Nodulation protein S; N 99.8 1.1E-17 3.6E-22 128.6 16.1 111 81-210 48-158 (216)
50 2g72_A Phenylethanolamine N-me 99.8 8.1E-18 2.8E-22 135.0 15.6 139 84-222 71-249 (289)
51 1xxl_A YCGJ protein; structura 99.8 5.8E-18 2E-22 132.3 14.3 112 76-206 13-124 (239)
52 1zx0_A Guanidinoacetate N-meth 99.8 9.9E-19 3.4E-23 136.4 9.8 126 82-222 58-203 (236)
53 3ccf_A Cyclopropane-fatty-acyl 99.8 2.7E-18 9.2E-23 137.1 12.4 107 77-208 50-156 (279)
54 3sm3_A SAM-dependent methyltra 99.8 9.7E-18 3.3E-22 130.1 15.2 114 82-206 28-141 (235)
55 3ocj_A Putative exported prote 99.8 5.7E-18 2E-22 137.0 14.3 111 81-206 115-227 (305)
56 3mgg_A Methyltransferase; NYSG 99.8 2.8E-18 9.7E-23 136.6 12.3 108 82-207 35-143 (276)
57 3iv6_A Putative Zn-dependent a 99.8 3.5E-18 1.2E-22 134.7 11.7 116 73-207 34-149 (261)
58 2p8j_A S-adenosylmethionine-de 99.8 6.9E-18 2.4E-22 128.8 12.9 109 82-207 21-129 (209)
59 2fk8_A Methoxy mycolic acid sy 99.8 7.9E-18 2.7E-22 136.9 13.8 116 74-207 80-195 (318)
60 2i62_A Nicotinamide N-methyltr 99.8 5.5E-18 1.9E-22 133.9 12.6 139 83-222 55-232 (265)
61 3cgg_A SAM-dependent methyltra 99.8 2.5E-17 8.6E-22 124.0 15.6 119 82-222 44-168 (195)
62 2pxx_A Uncharacterized protein 99.8 1.4E-17 4.9E-22 127.4 14.2 124 82-221 40-175 (215)
63 1vlm_A SAM-dependent methyltra 99.8 1.2E-17 4E-22 128.8 13.1 129 36-208 13-141 (219)
64 3orh_A Guanidinoacetate N-meth 99.8 2.9E-18 9.8E-23 133.9 9.6 119 69-205 46-169 (236)
65 2p35_A Trans-aconitate 2-methy 99.8 9.1E-18 3.1E-22 132.3 12.2 110 75-208 24-134 (259)
66 3ggd_A SAM-dependent methyltra 99.7 6.9E-18 2.4E-22 132.1 10.9 112 82-208 54-165 (245)
67 3bxo_A N,N-dimethyltransferase 99.7 2.4E-17 8.1E-22 128.3 13.3 104 83-208 39-143 (239)
68 3i9f_A Putative type 11 methyl 99.7 6.4E-18 2.2E-22 125.1 9.5 101 80-207 13-113 (170)
69 3g2m_A PCZA361.24; SAM-depende 99.7 3.4E-17 1.2E-21 132.0 14.1 124 73-212 72-196 (299)
70 3g07_A 7SK snRNA methylphospha 99.7 2.8E-17 9.5E-22 132.2 12.7 126 83-208 45-222 (292)
71 3g5t_A Trans-aconitate 3-methy 99.7 3.1E-17 1.1E-21 132.3 12.9 111 82-204 34-147 (299)
72 1ve3_A Hypothetical protein PH 99.7 7.1E-17 2.4E-21 124.7 14.3 111 83-211 37-147 (227)
73 3e05_A Precorrin-6Y C5,15-meth 99.7 1.3E-16 4.5E-21 121.5 14.9 125 76-221 32-160 (204)
74 3bkx_A SAM-dependent methyltra 99.7 6.2E-17 2.1E-21 128.7 13.4 118 72-206 31-159 (275)
75 3p9n_A Possible methyltransfer 99.7 1.1E-16 3.9E-21 120.5 13.8 111 83-208 43-155 (189)
76 3m70_A Tellurite resistance pr 99.7 6.9E-17 2.3E-21 129.3 13.1 105 82-205 118-222 (286)
77 2xvm_A Tellurite resistance pr 99.7 7.2E-17 2.5E-21 122.1 12.4 107 81-205 29-135 (199)
78 3njr_A Precorrin-6Y methylase; 99.7 2.9E-16 1E-20 119.8 15.4 123 76-221 47-172 (204)
79 3cc8_A Putative methyltransfer 99.7 7.4E-17 2.5E-21 124.6 11.7 102 83-208 31-132 (230)
80 3fpf_A Mtnas, putative unchara 99.7 1.6E-16 5.6E-21 126.6 13.8 109 77-208 115-224 (298)
81 3htx_A HEN1; HEN1, small RNA m 99.7 2.2E-16 7.4E-21 139.6 15.4 132 68-210 705-838 (950)
82 1dus_A MJ0882; hypothetical pr 99.7 3E-16 1E-20 118.0 14.1 129 73-219 41-173 (194)
83 3mti_A RRNA methylase; SAM-dep 99.7 2.3E-16 7.9E-21 118.3 13.3 113 81-207 19-136 (185)
84 2aot_A HMT, histamine N-methyl 99.7 4.6E-17 1.6E-21 130.9 10.0 113 83-207 51-173 (292)
85 3eey_A Putative rRNA methylase 99.7 2.8E-16 9.6E-21 119.0 13.8 115 81-207 19-140 (197)
86 1yzh_A TRNA (guanine-N(7)-)-me 99.7 3.6E-16 1.2E-20 120.0 14.5 128 83-222 40-175 (214)
87 3hm2_A Precorrin-6Y C5,15-meth 99.7 2.9E-16 9.9E-21 116.7 13.2 128 73-221 14-145 (178)
88 3grz_A L11 mtase, ribosomal pr 99.7 2.8E-16 9.7E-21 119.7 13.2 118 82-222 58-178 (205)
89 3evz_A Methyltransferase; NYSG 99.7 3.9E-16 1.3E-20 121.0 14.0 128 81-222 52-199 (230)
90 1l3i_A Precorrin-6Y methyltran 99.7 4.7E-16 1.6E-20 116.7 13.8 124 77-221 26-152 (192)
91 3lpm_A Putative methyltransfer 99.7 3.7E-16 1.3E-20 123.5 13.5 130 82-222 46-194 (259)
92 3r0q_C Probable protein argini 99.7 5.7E-17 2E-21 134.8 8.9 120 70-205 49-168 (376)
93 2r3s_A Uncharacterized protein 99.7 1.1E-15 3.9E-20 124.9 16.0 114 76-206 155-271 (335)
94 2kw5_A SLR1183 protein; struct 99.7 3.3E-16 1.1E-20 119.0 11.9 106 83-209 29-134 (202)
95 3m33_A Uncharacterized protein 99.7 1.8E-16 6.2E-21 122.8 10.6 111 82-222 46-160 (226)
96 2fca_A TRNA (guanine-N(7)-)-me 99.7 4.7E-16 1.6E-20 119.5 12.8 127 83-221 37-171 (213)
97 2fyt_A Protein arginine N-meth 99.7 4.2E-16 1.4E-20 127.9 13.1 118 71-203 51-168 (340)
98 3q7e_A Protein arginine N-meth 99.7 2.4E-16 8.2E-21 129.8 11.6 118 72-204 54-171 (349)
99 2zfu_A Nucleomethylin, cerebra 99.7 2.3E-16 7.8E-21 121.1 10.3 102 83-222 66-172 (215)
100 4e2x_A TCAB9; kijanose, tetron 99.7 8E-17 2.7E-21 135.6 8.1 118 71-210 94-212 (416)
101 1qzz_A RDMB, aclacinomycin-10- 99.7 9.6E-16 3.3E-20 127.2 14.2 109 81-207 179-288 (374)
102 2ift_A Putative methylase HI07 99.7 3.9E-16 1.3E-20 118.9 10.9 110 84-209 53-166 (201)
103 2y1w_A Histone-arginine methyl 99.7 3E-16 1E-20 129.2 10.9 120 70-206 36-155 (348)
104 2esr_A Methyltransferase; stru 99.7 4.1E-16 1.4E-20 116.0 10.5 111 82-210 29-142 (177)
105 3dp7_A SAM-dependent methyltra 99.7 3E-15 1E-19 123.9 16.6 106 83-205 178-286 (363)
106 3lbf_A Protein-L-isoaspartate 99.7 1.1E-15 3.8E-20 116.8 12.6 110 74-208 67-176 (210)
107 3dxy_A TRNA (guanine-N(7)-)-me 99.7 6.5E-16 2.2E-20 119.1 10.9 115 83-211 33-155 (218)
108 2qe6_A Uncharacterized protein 99.7 2.4E-15 8.2E-20 119.8 14.5 126 70-208 62-198 (274)
109 1g6q_1 HnRNP arginine N-methyl 99.7 1.1E-15 3.8E-20 124.8 12.8 119 71-204 25-143 (328)
110 1x19_A CRTF-related protein; m 99.7 3.7E-15 1.2E-19 123.2 16.0 110 79-206 185-295 (359)
111 2yxd_A Probable cobalt-precorr 99.7 2.1E-15 7.2E-20 112.3 13.2 120 76-221 27-149 (183)
112 3uwp_A Histone-lysine N-methyl 99.7 2E-15 6.8E-20 124.8 14.1 128 69-205 158-287 (438)
113 3mcz_A O-methyltransferase; ad 99.7 3E-15 1E-19 123.2 15.3 115 76-205 170-286 (352)
114 3gwz_A MMCR; methyltransferase 99.6 5.4E-15 1.8E-19 122.6 16.1 106 82-205 200-306 (369)
115 3i53_A O-methyltransferase; CO 99.6 4.6E-15 1.6E-19 121.2 14.6 105 84-206 169-274 (332)
116 4df3_A Fibrillarin-like rRNA/T 99.6 3.5E-15 1.2E-19 115.4 12.9 125 79-222 72-210 (233)
117 3dmg_A Probable ribosomal RNA 99.6 4.9E-15 1.7E-19 123.1 14.7 111 83-209 232-343 (381)
118 1xdz_A Methyltransferase GIDB; 99.6 3.6E-15 1.2E-19 116.5 13.0 121 83-222 69-195 (240)
119 2fpo_A Methylase YHHF; structu 99.6 2.1E-15 7.3E-20 114.8 11.4 108 84-209 54-163 (202)
120 2fhp_A Methylase, putative; al 99.6 8.7E-16 3E-20 115.0 9.0 114 83-210 43-158 (187)
121 3tma_A Methyltransferase; thum 99.6 5.4E-15 1.8E-19 122.0 14.3 130 77-221 196-331 (354)
122 3q87_B N6 adenine specific DNA 99.6 2.6E-15 8.9E-20 111.3 11.2 113 83-222 22-142 (170)
123 4dzr_A Protein-(glutamine-N5) 99.6 3.9E-16 1.3E-20 119.3 6.9 138 74-222 19-185 (215)
124 2frn_A Hypothetical protein PH 99.6 3.6E-15 1.2E-19 119.0 12.6 119 82-222 123-250 (278)
125 2nxc_A L11 mtase, ribosomal pr 99.6 5.3E-15 1.8E-19 116.6 13.3 117 82-222 118-237 (254)
126 2b3t_A Protein methyltransfera 99.6 1E-14 3.5E-19 116.2 14.9 125 83-222 108-256 (276)
127 1af7_A Chemotaxis receptor met 99.6 2.7E-15 9.3E-20 119.1 11.4 118 84-207 105-253 (274)
128 3ckk_A TRNA (guanine-N(7)-)-me 99.6 5.5E-15 1.9E-19 115.1 12.9 130 83-220 45-185 (235)
129 1tw3_A COMT, carminomycin 4-O- 99.6 7.7E-15 2.6E-19 121.2 14.4 109 81-207 180-289 (360)
130 3fzg_A 16S rRNA methylase; met 99.6 7E-16 2.4E-20 114.7 7.2 103 82-204 47-150 (200)
131 3gdh_A Trimethylguanosine synt 99.6 7.7E-17 2.6E-21 125.9 2.2 104 83-205 77-180 (241)
132 4hc4_A Protein arginine N-meth 99.6 2.4E-15 8.2E-20 124.2 11.2 119 70-204 69-187 (376)
133 1vbf_A 231AA long hypothetical 99.6 6.9E-15 2.4E-19 114.0 13.1 110 73-209 59-168 (231)
134 3mb5_A SAM-dependent methyltra 99.6 4.8E-15 1.6E-19 116.6 12.2 124 76-222 85-215 (255)
135 1yb2_A Hypothetical protein TA 99.6 1.7E-15 5.9E-20 120.7 9.7 120 80-222 106-230 (275)
136 3bzb_A Uncharacterized protein 99.6 8.3E-15 2.8E-19 117.1 13.6 134 82-222 77-230 (281)
137 3b3j_A Histone-arginine methyl 99.6 2E-15 7E-20 128.9 10.7 116 73-205 147-262 (480)
138 3u81_A Catechol O-methyltransf 99.6 7.4E-15 2.5E-19 113.3 12.7 125 82-219 56-186 (221)
139 1p91_A Ribosomal RNA large sub 99.6 9.3E-15 3.2E-19 115.8 13.2 102 83-214 84-186 (269)
140 3mq2_A 16S rRNA methyltransfer 99.6 5.6E-15 1.9E-19 113.5 11.6 116 76-206 19-140 (218)
141 3ntv_A MW1564 protein; rossman 99.6 7.6E-15 2.6E-19 114.1 12.3 106 81-205 68-175 (232)
142 3bwc_A Spermidine synthase; SA 99.6 1.3E-14 4.5E-19 117.2 14.0 130 83-222 94-233 (304)
143 2ip2_A Probable phenazine-spec 99.6 1.3E-14 4.5E-19 118.6 14.2 102 86-205 169-271 (334)
144 3p2e_A 16S rRNA methylase; met 99.6 4.7E-15 1.6E-19 114.8 10.5 110 82-204 22-137 (225)
145 2pwy_A TRNA (adenine-N(1)-)-me 99.6 8.3E-15 2.8E-19 115.3 12.0 124 76-222 88-217 (258)
146 3lec_A NADB-rossmann superfami 99.6 9E-15 3.1E-19 112.7 11.7 122 82-222 19-142 (230)
147 1fbn_A MJ fibrillarin homologu 99.6 1.1E-14 3.6E-19 113.1 12.2 101 82-205 72-177 (230)
148 1wy7_A Hypothetical protein PH 99.6 1E-13 3.6E-18 105.5 16.9 118 82-221 47-167 (207)
149 2ipx_A RRNA 2'-O-methyltransfe 99.6 8.4E-15 2.9E-19 113.8 11.0 122 82-222 75-210 (233)
150 3g89_A Ribosomal RNA small sub 99.6 1.9E-14 6.4E-19 113.1 12.9 120 83-221 79-204 (249)
151 1ne2_A Hypothetical protein TA 99.6 8E-14 2.7E-18 105.7 16.0 113 82-220 49-162 (200)
152 1nt2_A Fibrillarin-like PRE-rR 99.6 1.1E-14 3.8E-19 111.5 11.2 106 82-206 55-161 (210)
153 2yxe_A Protein-L-isoaspartate 99.6 1.7E-14 5.9E-19 110.5 12.1 111 75-209 68-180 (215)
154 3dr5_A Putative O-methyltransf 99.6 6.2E-15 2.1E-19 113.8 9.6 103 85-205 57-162 (221)
155 3kr9_A SAM-dependent methyltra 99.6 1.5E-14 5.3E-19 111.2 11.7 122 82-222 13-136 (225)
156 2ozv_A Hypothetical protein AT 99.6 2.1E-14 7.2E-19 113.5 12.5 132 82-218 34-184 (260)
157 3gnl_A Uncharacterized protein 99.6 1.7E-14 5.7E-19 112.1 11.6 122 82-222 19-142 (244)
158 4dcm_A Ribosomal RNA large sub 99.6 9.7E-15 3.3E-19 121.1 10.9 119 76-208 214-336 (375)
159 1ws6_A Methyltransferase; stru 99.6 1E-14 3.5E-19 107.5 9.7 110 84-211 41-152 (171)
160 3tfw_A Putative O-methyltransf 99.6 2.7E-14 9.1E-19 112.1 12.6 110 81-207 60-171 (248)
161 1o54_A SAM-dependent O-methylt 99.6 1E-14 3.5E-19 116.2 10.4 124 76-222 104-232 (277)
162 3lst_A CALO1 methyltransferase 99.6 2.7E-14 9.2E-19 117.5 13.0 104 81-205 181-285 (348)
163 1jsx_A Glucose-inhibited divis 99.6 2.4E-14 8.2E-19 109.0 11.8 101 84-207 65-166 (207)
164 2pjd_A Ribosomal RNA small sub 99.6 9.2E-15 3.2E-19 120.1 10.2 117 76-209 188-306 (343)
165 3sso_A Methyltransferase; macr 99.6 1.5E-14 5.1E-19 119.3 11.1 133 38-205 182-323 (419)
166 1i9g_A Hypothetical protein RV 99.6 2.2E-14 7.4E-19 114.3 11.7 125 76-222 91-223 (280)
167 3tm4_A TRNA (guanine N2-)-meth 99.6 4.4E-14 1.5E-18 117.3 13.9 126 82-222 215-345 (373)
168 1dl5_A Protein-L-isoaspartate 99.6 2.8E-14 9.4E-19 116.0 12.4 113 73-209 64-178 (317)
169 1u2z_A Histone-lysine N-methyl 99.6 2.7E-14 9.1E-19 119.9 12.6 119 71-205 229-358 (433)
170 1o9g_A RRNA methyltransferase; 99.6 1.1E-14 3.6E-19 114.4 9.2 122 84-205 51-213 (250)
171 3duw_A OMT, O-methyltransferas 99.6 4E-14 1.4E-18 109.1 11.9 112 81-207 55-168 (223)
172 2yvl_A TRMI protein, hypotheti 99.6 4.8E-14 1.6E-18 110.2 12.4 115 77-214 84-198 (248)
173 2gpy_A O-methyltransferase; st 99.5 3.7E-14 1.3E-18 110.1 11.2 109 81-206 51-160 (233)
174 1jg1_A PIMT;, protein-L-isoasp 99.5 4E-14 1.4E-18 110.1 11.4 112 74-209 81-192 (235)
175 3tr6_A O-methyltransferase; ce 99.5 3.7E-14 1.3E-18 109.4 10.5 111 82-207 62-175 (225)
176 4azs_A Methyltransferase WBDD; 99.5 1.5E-14 5.2E-19 126.2 9.1 106 82-204 64-171 (569)
177 1i1n_A Protein-L-isoaspartate 99.5 8.7E-14 3E-18 107.4 12.3 104 82-208 75-184 (226)
178 2pbf_A Protein-L-isoaspartate 99.5 6.1E-14 2.1E-18 108.4 11.4 105 81-208 77-195 (227)
179 2b25_A Hypothetical protein; s 99.5 9.2E-14 3.1E-18 113.8 13.0 129 76-217 97-230 (336)
180 3giw_A Protein of unknown func 99.5 9.3E-14 3.2E-18 109.5 11.8 126 70-207 63-201 (277)
181 2vdv_E TRNA (guanine-N(7)-)-me 99.5 1.2E-13 4.2E-18 108.2 12.5 133 83-220 48-190 (246)
182 1nv8_A HEMK protein; class I a 99.5 7.2E-14 2.5E-18 111.8 11.3 121 74-209 113-252 (284)
183 3adn_A Spermidine synthase; am 99.5 1.7E-13 5.8E-18 110.0 13.3 114 83-206 82-198 (294)
184 3id6_C Fibrillarin-like rRNA/T 99.5 2.1E-13 7.2E-18 105.6 13.4 123 81-222 73-209 (232)
185 3c3p_A Methyltransferase; NP_9 99.5 3.5E-14 1.2E-18 108.5 8.9 103 83-206 55-160 (210)
186 3r3h_A O-methyltransferase, SA 99.5 1.8E-14 6E-19 112.8 7.4 109 82-205 58-169 (242)
187 4a6d_A Hydroxyindole O-methylt 99.5 5.4E-13 1.9E-17 109.9 16.3 105 82-205 177-282 (353)
188 2igt_A SAM dependent methyltra 99.5 8E-14 2.7E-18 113.8 11.0 114 83-206 152-272 (332)
189 1ixk_A Methyltransferase; open 99.5 1.9E-13 6.5E-18 110.9 13.2 128 80-221 114-267 (315)
190 1ej0_A FTSJ; methyltransferase 99.5 4.9E-14 1.7E-18 104.1 8.6 112 82-218 20-151 (180)
191 2hnk_A SAM-dependent O-methylt 99.5 9.2E-14 3.2E-18 108.3 10.5 111 81-206 57-181 (239)
192 2plw_A Ribosomal RNA methyltra 99.5 2E-13 6.8E-18 103.4 11.7 117 82-218 20-169 (201)
193 2f8l_A Hypothetical protein LM 99.5 4.7E-13 1.6E-17 109.9 14.3 139 65-221 110-278 (344)
194 3hp7_A Hemolysin, putative; st 99.5 7E-14 2.4E-18 111.5 8.8 108 75-205 75-184 (291)
195 1r18_A Protein-L-isoaspartate( 99.5 1.1E-13 3.7E-18 107.1 9.7 105 81-208 81-196 (227)
196 2bm8_A Cephalosporin hydroxyla 99.5 1E-13 3.4E-18 108.1 9.2 112 83-219 80-207 (236)
197 1sui_A Caffeoyl-COA O-methyltr 99.5 1.3E-13 4.6E-18 108.1 9.6 109 82-205 77-189 (247)
198 3v97_A Ribosomal RNA large sub 99.5 2.2E-13 7.4E-18 121.3 12.1 128 83-222 538-675 (703)
199 2b78_A Hypothetical protein SM 99.5 1.3E-13 4.3E-18 114.9 9.8 117 83-208 211-333 (385)
200 3gjy_A Spermidine synthase; AP 99.5 2.7E-13 9.2E-18 109.3 11.4 110 86-207 91-201 (317)
201 1g8a_A Fibrillarin-like PRE-rR 99.5 4.8E-13 1.6E-17 103.3 12.4 106 82-206 71-178 (227)
202 1mjf_A Spermidine synthase; sp 99.5 2.9E-13 9.8E-18 108.2 11.1 118 82-207 73-194 (281)
203 3ajd_A Putative methyltransfer 99.5 2.1E-13 7.3E-18 108.5 10.2 117 81-207 80-212 (274)
204 1fp1_D Isoliquiritigenin 2'-O- 99.5 2.6E-13 9E-18 112.5 10.7 98 82-205 207-305 (372)
205 3p9c_A Caffeic acid O-methyltr 99.5 4.2E-13 1.4E-17 111.0 11.7 98 82-205 199-297 (364)
206 3reo_A (ISO)eugenol O-methyltr 99.5 3.4E-13 1.2E-17 111.8 10.9 97 83-205 202-299 (368)
207 2qm3_A Predicted methyltransfe 99.5 1.1E-12 3.9E-17 108.7 14.1 119 84-221 172-301 (373)
208 1iy9_A Spermidine synthase; ro 99.5 3.8E-13 1.3E-17 107.1 10.7 116 83-208 74-191 (275)
209 2ld4_A Anamorsin; methyltransf 99.5 1.6E-13 5.6E-18 101.9 8.1 108 81-221 9-128 (176)
210 3cbg_A O-methyltransferase; cy 99.5 3E-13 1E-17 105.0 9.8 109 82-206 70-182 (232)
211 2h00_A Methyltransferase 10 do 99.4 4.6E-12 1.6E-16 99.5 16.4 131 84-222 65-231 (254)
212 2o07_A Spermidine synthase; st 99.4 7.5E-13 2.6E-17 106.8 11.9 114 83-206 94-209 (304)
213 3a27_A TYW2, uncharacterized p 99.4 4E-13 1.4E-17 106.8 10.2 103 82-207 117-220 (272)
214 2oxt_A Nucleoside-2'-O-methylt 99.4 1.1E-13 3.7E-18 109.5 6.9 109 81-207 71-186 (265)
215 2i7c_A Spermidine synthase; tr 99.4 5.1E-13 1.7E-17 106.8 10.8 114 83-208 77-194 (283)
216 3c3y_A Pfomt, O-methyltransfer 99.4 4.9E-13 1.7E-17 104.2 10.5 110 82-206 68-181 (237)
217 2avd_A Catechol-O-methyltransf 99.4 3.9E-13 1.3E-17 103.9 9.8 108 82-205 67-178 (229)
218 2wa2_A Non-structural protein 99.4 1.5E-13 5E-18 109.4 6.8 108 82-207 80-194 (276)
219 1fp2_A Isoflavone O-methyltran 99.4 6.6E-13 2.2E-17 109.3 10.9 99 82-206 186-288 (352)
220 1inl_A Spermidine synthase; be 99.4 1.6E-12 5.4E-17 104.6 12.9 115 83-208 89-207 (296)
221 2b2c_A Spermidine synthase; be 99.4 1E-12 3.5E-17 106.4 11.7 113 83-207 107-223 (314)
222 1zq9_A Probable dimethyladenos 99.4 4.9E-13 1.7E-17 107.0 9.6 113 72-203 16-144 (285)
223 2nyu_A Putative ribosomal RNA 99.4 1.1E-12 3.9E-17 98.7 11.1 116 82-217 20-159 (196)
224 3c0k_A UPF0064 protein YCCW; P 99.4 1.7E-12 5.9E-17 108.5 13.1 116 83-207 219-340 (396)
225 2pt6_A Spermidine synthase; tr 99.4 7.3E-13 2.5E-17 107.7 10.6 114 83-208 115-232 (321)
226 1xj5_A Spermidine synthase 1; 99.4 9.1E-13 3.1E-17 107.5 11.1 115 83-206 119-235 (334)
227 1uir_A Polyamine aminopropyltr 99.4 7.4E-13 2.5E-17 107.4 10.3 114 83-206 76-195 (314)
228 3k6r_A Putative transferase PH 99.4 3.6E-12 1.2E-16 101.2 13.7 102 82-205 123-224 (278)
229 2as0_A Hypothetical protein PH 99.4 6E-13 2.1E-17 111.3 9.7 117 83-208 216-337 (396)
230 3dou_A Ribosomal RNA large sub 99.4 1.8E-12 6.3E-17 97.7 11.4 115 82-217 23-153 (191)
231 2p41_A Type II methyltransfera 99.4 8.7E-13 3E-17 106.4 8.1 106 82-209 80-194 (305)
232 3frh_A 16S rRNA methylase; met 99.4 2.1E-12 7.3E-17 99.4 9.7 101 83-204 104-204 (253)
233 3opn_A Putative hemolysin; str 99.4 6.3E-13 2.1E-17 103.2 6.6 99 84-205 37-136 (232)
234 2yxl_A PH0851 protein, 450AA l 99.4 6.1E-12 2.1E-16 106.8 13.2 127 81-219 256-408 (450)
235 1wxx_A TT1595, hypothetical pr 99.4 1.1E-12 3.7E-17 109.2 7.6 114 84-208 209-327 (382)
236 1zg3_A Isoflavanone 4'-O-methy 99.4 3.2E-12 1.1E-16 105.5 10.0 98 82-205 191-292 (358)
237 4dmg_A Putative uncharacterize 99.3 6.2E-12 2.1E-16 104.7 11.6 110 83-207 213-327 (393)
238 1sqg_A SUN protein, FMU protei 99.3 9.1E-12 3.1E-16 105.2 12.8 127 80-219 242-393 (429)
239 2yx1_A Hypothetical protein MJ 99.3 8.1E-12 2.8E-16 102.2 11.8 112 82-219 193-306 (336)
240 3m4x_A NOL1/NOP2/SUN family pr 99.3 5.5E-12 1.9E-16 106.7 10.8 128 80-220 101-254 (456)
241 3lcv_B Sisomicin-gentamicin re 99.3 1.9E-12 6.5E-17 100.6 7.3 103 83-204 131-234 (281)
242 3m6w_A RRNA methylase; rRNA me 99.3 7.1E-12 2.4E-16 106.2 11.0 114 80-207 97-230 (464)
243 2cmg_A Spermidine synthase; tr 99.3 3.6E-12 1.2E-16 100.6 8.0 102 83-207 71-172 (262)
244 2h1r_A Dimethyladenosine trans 99.3 1.3E-11 4.6E-16 99.3 11.4 89 72-177 30-118 (299)
245 2frx_A Hypothetical protein YE 99.3 3.3E-11 1.1E-15 102.8 14.4 111 84-207 117-247 (479)
246 3ldg_A Putative uncharacterize 99.3 6.1E-11 2.1E-15 98.4 15.1 120 77-210 187-347 (384)
247 3ldu_A Putative methylase; str 99.3 1.7E-11 6E-16 101.9 11.7 120 77-210 188-348 (385)
248 2xyq_A Putative 2'-O-methyl tr 99.3 1.3E-11 4.5E-16 98.5 10.3 111 82-222 61-190 (290)
249 2ih2_A Modification methylase 99.3 1.2E-11 4.1E-16 104.0 10.6 115 83-221 38-186 (421)
250 3k0b_A Predicted N6-adenine-sp 99.3 3.3E-11 1.1E-15 100.5 12.7 120 77-210 194-354 (393)
251 3fut_A Dimethyladenosine trans 99.3 9.4E-11 3.2E-15 92.8 14.0 101 70-191 33-133 (271)
252 1uwv_A 23S rRNA (uracil-5-)-me 99.3 1.3E-10 4.6E-15 98.1 15.7 129 73-221 275-406 (433)
253 2okc_A Type I restriction enzy 99.3 1.1E-11 3.8E-16 105.1 8.5 130 62-208 152-309 (445)
254 3gru_A Dimethyladenosine trans 99.3 7.3E-11 2.5E-15 94.5 12.7 89 71-176 37-125 (295)
255 2jjq_A Uncharacterized RNA met 99.2 1.7E-10 5.9E-15 97.0 14.5 110 82-217 288-397 (425)
256 1qam_A ERMC' methyltransferase 99.2 4.4E-11 1.5E-15 93.5 9.7 87 72-175 18-104 (244)
257 1yub_A Ermam, rRNA methyltrans 99.2 1.5E-12 5.1E-17 101.9 0.2 112 76-207 21-146 (245)
258 2qfm_A Spermine synthase; sper 99.2 1.9E-10 6.4E-15 93.9 11.6 127 84-216 188-326 (364)
259 3tqs_A Ribosomal RNA small sub 99.2 7.6E-10 2.6E-14 86.9 14.5 91 71-175 16-106 (255)
260 3axs_A Probable N(2),N(2)-dime 99.1 2.6E-10 8.9E-15 94.7 9.9 120 83-222 51-179 (392)
261 2dul_A N(2),N(2)-dimethylguano 99.1 1.7E-09 5.7E-14 89.7 13.5 111 84-207 47-165 (378)
262 2ar0_A M.ecoki, type I restric 99.1 5.9E-10 2E-14 96.5 11.0 145 61-220 149-334 (541)
263 3bt7_A TRNA (uracil-5-)-methyl 99.1 1.2E-09 4E-14 90.5 12.4 112 85-217 214-337 (369)
264 3ftd_A Dimethyladenosine trans 99.1 4.7E-10 1.6E-14 87.9 9.4 74 71-157 18-91 (249)
265 2b9e_A NOL1/NOP2/SUN domain fa 99.1 2.6E-09 8.7E-14 86.2 13.7 115 81-207 99-235 (309)
266 3v97_A Ribosomal RNA large sub 99.0 2.5E-09 8.6E-14 95.3 13.1 124 76-210 182-351 (703)
267 4gqb_A Protein arginine N-meth 99.0 9E-10 3.1E-14 96.2 9.6 102 85-203 358-464 (637)
268 1m6y_A S-adenosyl-methyltransf 99.0 2E-09 6.9E-14 86.4 9.5 88 76-173 18-106 (301)
269 3uzu_A Ribosomal RNA small sub 99.0 3E-09 1E-13 84.6 10.1 91 71-174 29-123 (279)
270 3lkd_A Type I restriction-modi 99.0 7.8E-09 2.7E-13 89.3 13.2 152 60-221 196-381 (542)
271 3khk_A Type I restriction-modi 99.0 2E-09 6.7E-14 93.2 9.1 145 61-221 225-419 (544)
272 3evf_A RNA-directed RNA polyme 99.0 4.3E-09 1.5E-13 82.3 10.0 115 76-208 66-186 (277)
273 2r6z_A UPF0341 protein in RSP 98.9 1.6E-09 5.6E-14 85.2 7.6 113 82-208 81-218 (258)
274 1qyr_A KSGA, high level kasuga 98.9 2.1E-09 7.1E-14 84.3 6.9 90 72-175 9-100 (252)
275 3cvo_A Methyltransferase-like 98.8 3.3E-08 1.1E-12 74.5 11.2 104 83-205 29-153 (202)
276 3s1s_A Restriction endonucleas 98.8 8.8E-08 3E-12 85.2 15.4 140 61-209 295-468 (878)
277 3ua3_A Protein arginine N-meth 98.8 9E-09 3.1E-13 90.1 8.5 108 85-203 410-531 (745)
278 3o4f_A Spermidine synthase; am 98.8 3E-08 1E-12 78.9 10.7 117 82-206 81-198 (294)
279 3b5i_A S-adenosyl-L-methionine 98.8 3.4E-08 1.2E-12 81.4 11.4 137 69-207 32-226 (374)
280 3gcz_A Polyprotein; flavivirus 98.8 7.6E-09 2.6E-13 81.0 6.4 110 81-208 87-203 (282)
281 2qy6_A UPF0209 protein YFCK; s 98.7 3E-08 1E-12 77.8 7.8 135 83-222 59-228 (257)
282 2efj_A 3,7-dimethylxanthine me 98.7 1.8E-07 6.1E-12 77.2 12.5 121 85-207 53-226 (384)
283 3ll7_A Putative methyltransfer 98.7 2.3E-08 7.7E-13 83.3 5.7 77 84-173 93-171 (410)
284 1wg8_A Predicted S-adenosylmet 98.6 1.6E-07 5.5E-12 73.9 9.6 86 73-172 11-96 (285)
285 1m6e_X S-adenosyl-L-methionnin 98.6 2.3E-07 8E-12 75.9 9.8 114 84-207 51-210 (359)
286 2oyr_A UPF0341 protein YHIQ; a 98.6 2.1E-08 7.2E-13 78.7 2.8 91 81-177 83-176 (258)
287 3ufb_A Type I restriction-modi 98.6 7.3E-07 2.5E-11 77.0 12.6 149 60-221 196-385 (530)
288 3c6k_A Spermine synthase; sper 98.5 7.1E-07 2.4E-11 73.2 11.0 121 83-205 204-330 (381)
289 4fzv_A Putative methyltransfer 98.5 7.5E-07 2.6E-11 73.0 11.0 120 80-207 144-285 (359)
290 3eld_A Methyltransferase; flav 98.5 3.8E-07 1.3E-11 71.9 8.6 108 82-208 79-193 (300)
291 2wk1_A NOVP; transferase, O-me 98.5 2.3E-06 8E-11 67.8 13.0 109 83-208 105-246 (282)
292 4auk_A Ribosomal RNA large sub 98.5 2.2E-06 7.7E-11 70.0 11.9 113 82-221 209-332 (375)
293 2px2_A Genome polyprotein [con 98.4 8.7E-07 3E-11 68.4 8.4 113 81-214 70-193 (269)
294 3lkz_A Non-structural protein 98.3 6.1E-06 2.1E-10 64.9 11.6 124 76-217 86-217 (321)
295 3p8z_A Mtase, non-structural p 98.2 2E-05 6.9E-10 60.0 11.0 114 76-208 70-188 (267)
296 2k4m_A TR8_protein, UPF0146 pr 98.1 3.3E-06 1.1E-10 59.6 5.4 86 83-205 34-120 (153)
297 3tka_A Ribosomal RNA small sub 97.9 4.5E-05 1.5E-09 61.4 8.3 88 73-173 46-136 (347)
298 2zig_A TTHA0409, putative modi 97.9 2.8E-05 9.6E-10 62.2 7.2 54 73-128 225-278 (297)
299 3r24_A NSP16, 2'-O-methyl tran 97.8 0.00019 6.6E-09 56.5 9.5 100 82-208 107-219 (344)
300 3g7u_A Cytosine-specific methy 97.7 0.00065 2.2E-08 56.0 13.0 122 86-222 3-144 (376)
301 1i4w_A Mitochondrial replicati 97.7 0.00016 5.3E-09 59.1 8.8 71 73-155 41-118 (353)
302 1g55_A DNA cytosine methyltran 97.6 0.00024 8.3E-09 57.9 9.1 122 85-222 2-142 (343)
303 2oo3_A Protein involved in cat 97.6 0.00017 5.9E-09 56.7 7.6 121 84-221 91-218 (283)
304 2uyo_A Hypothetical protein ML 97.6 0.002 6.9E-08 51.7 13.7 115 84-208 102-220 (310)
305 2vz8_A Fatty acid synthase; tr 97.6 2.6E-05 8.9E-10 78.2 2.9 102 84-206 1240-1348(2512)
306 1rjd_A PPM1P, carboxy methyl t 97.5 0.0061 2.1E-07 49.4 15.2 118 83-205 96-232 (334)
307 3ubt_Y Modification methylase 97.5 0.0022 7.7E-08 51.7 12.6 118 86-222 1-136 (331)
308 2c7p_A Modification methylase 97.4 0.0018 6.2E-08 52.3 11.6 119 84-222 10-146 (327)
309 3vyw_A MNMC2; tRNA wobble urid 97.3 0.0022 7.4E-08 51.2 10.5 124 83-222 95-241 (308)
310 1g60_A Adenine-specific methyl 97.3 0.00063 2.2E-08 53.2 7.1 46 82-128 210-255 (260)
311 3qv2_A 5-cytosine DNA methyltr 97.2 0.0023 7.8E-08 51.7 9.6 122 84-222 9-153 (327)
312 3tos_A CALS11; methyltransfera 97.1 0.056 1.9E-06 42.0 17.0 166 34-207 17-218 (257)
313 4h0n_A DNMT2; SAH binding, tra 96.9 0.0052 1.8E-07 49.8 9.4 121 86-222 4-142 (333)
314 2zig_A TTHA0409, putative modi 96.6 0.0033 1.1E-07 50.1 5.9 77 143-222 21-129 (297)
315 1f8f_A Benzyl alcohol dehydrog 96.6 0.0079 2.7E-07 49.3 8.2 98 81-205 187-288 (371)
316 2qrv_A DNA (cytosine-5)-methyl 96.3 0.011 3.6E-07 47.1 7.0 76 83-173 14-91 (295)
317 3s2e_A Zinc-containing alcohol 96.2 0.019 6.5E-07 46.4 8.4 99 81-205 163-262 (340)
318 3me5_A Cytosine-specific methy 96.2 0.042 1.4E-06 46.7 10.6 127 85-222 88-253 (482)
319 1boo_A Protein (N-4 cytosine-s 96.2 0.014 4.9E-07 46.9 7.4 47 81-128 249-295 (323)
320 3pvc_A TRNA 5-methylaminomethy 96.1 0.027 9.1E-07 50.1 9.4 132 84-222 58-226 (689)
321 4ej6_A Putative zinc-binding d 96.1 0.044 1.5E-06 44.9 10.1 105 79-205 177-283 (370)
322 1pl8_A Human sorbitol dehydrog 96.1 0.022 7.6E-07 46.3 8.2 99 80-205 167-272 (356)
323 3two_A Mannitol dehydrogenase; 96.0 0.036 1.2E-06 44.8 8.9 91 81-205 173-264 (348)
324 3fwz_A Inner membrane protein 95.9 0.15 5.1E-06 35.3 10.7 112 85-221 7-119 (140)
325 1eg2_A Modification methylase 95.8 0.028 9.6E-07 45.2 7.3 54 73-128 232-288 (319)
326 3fpc_A NADP-dependent alcohol 95.7 0.038 1.3E-06 44.8 8.0 100 79-205 161-265 (352)
327 1uuf_A YAHK, zinc-type alcohol 95.7 0.054 1.8E-06 44.3 8.8 96 81-205 191-287 (369)
328 3ps9_A TRNA 5-methylaminomethy 95.6 0.037 1.3E-06 49.1 7.9 137 84-222 66-234 (676)
329 3m6i_A L-arabinitol 4-dehydrog 95.5 0.068 2.3E-06 43.5 8.9 101 80-205 175-282 (363)
330 1pqw_A Polyketide synthase; ro 95.5 0.04 1.4E-06 40.6 6.8 97 81-205 35-136 (198)
331 2dph_A Formaldehyde dismutase; 95.4 0.048 1.7E-06 45.0 7.8 108 81-205 182-298 (398)
332 2py6_A Methyltransferase FKBM; 95.4 0.036 1.2E-06 46.1 6.8 46 83-128 225-273 (409)
333 1e3j_A NADP(H)-dependent ketos 95.3 0.082 2.8E-06 42.8 8.8 99 81-205 165-270 (352)
334 1boo_A Protein (N-4 cytosine-s 95.3 0.038 1.3E-06 44.4 6.7 77 143-222 14-113 (323)
335 2h6e_A ADH-4, D-arabinose 1-de 95.3 0.032 1.1E-06 45.1 6.0 97 81-205 168-268 (344)
336 3uog_A Alcohol dehydrogenase; 95.1 0.058 2E-06 44.0 7.1 98 81-205 186-286 (363)
337 4b7c_A Probable oxidoreductase 95.1 0.065 2.2E-06 43.1 7.3 98 81-205 146-247 (336)
338 1kol_A Formaldehyde dehydrogen 95.0 0.028 9.7E-07 46.4 5.0 108 81-205 182-299 (398)
339 3ip1_A Alcohol dehydrogenase, 94.9 0.15 5.3E-06 42.1 9.4 46 82-127 211-258 (404)
340 1p0f_A NADP-dependent alcohol 94.9 0.11 3.6E-06 42.5 8.2 98 81-205 188-292 (373)
341 3uko_A Alcohol dehydrogenase c 94.9 0.088 3E-06 43.1 7.7 98 81-205 190-294 (378)
342 1cdo_A Alcohol dehydrogenase; 94.8 0.099 3.4E-06 42.7 7.9 98 81-205 189-293 (374)
343 2fzw_A Alcohol dehydrogenase c 94.8 0.12 4.1E-06 42.2 8.4 98 81-205 187-291 (373)
344 2jhf_A Alcohol dehydrogenase E 94.8 0.13 4.4E-06 42.0 8.6 98 81-205 188-292 (374)
345 3swr_A DNA (cytosine-5)-methyl 94.8 0.23 7.9E-06 45.9 10.8 125 84-222 539-695 (1002)
346 1rjw_A ADH-HT, alcohol dehydro 94.8 0.15 5E-06 41.1 8.7 98 81-205 161-260 (339)
347 3gms_A Putative NADPH:quinone 94.7 0.078 2.7E-06 42.7 7.0 98 81-205 141-242 (340)
348 1piw_A Hypothetical zinc-type 94.7 0.092 3.2E-06 42.7 7.5 98 81-205 176-275 (360)
349 3jv7_A ADH-A; dehydrogenase, n 94.7 0.08 2.7E-06 42.7 6.9 98 81-205 168-269 (345)
350 2c0c_A Zinc binding alcohol de 94.6 0.21 7.1E-06 40.6 9.2 97 81-205 160-260 (362)
351 1v3u_A Leukotriene B4 12- hydr 94.6 0.11 3.6E-06 41.8 7.3 97 81-205 142-243 (333)
352 4ft4_B DNA (cytosine-5)-methyl 94.4 0.46 1.6E-05 42.8 11.8 45 84-128 211-261 (784)
353 1zkd_A DUF185; NESG, RPR58, st 94.4 0.11 3.8E-06 42.8 7.1 57 72-128 68-132 (387)
354 4eye_A Probable oxidoreductase 94.3 0.11 3.6E-06 42.0 6.9 97 81-205 156-256 (342)
355 1jvb_A NAD(H)-dependent alcoho 94.3 0.13 4.3E-06 41.6 7.3 97 81-205 167-270 (347)
356 2hcy_A Alcohol dehydrogenase 1 94.3 0.1 3.4E-06 42.2 6.7 98 81-205 166-268 (347)
357 4dvj_A Putative zinc-dependent 94.3 0.18 6.1E-06 41.1 8.1 96 84-205 171-269 (363)
358 1e3i_A Alcohol dehydrogenase, 94.2 0.16 5.5E-06 41.4 7.9 97 81-205 192-296 (376)
359 1vj0_A Alcohol dehydrogenase, 94.2 0.11 3.7E-06 42.6 6.8 98 82-205 193-297 (380)
360 2d8a_A PH0655, probable L-thre 94.2 0.16 5.5E-06 41.0 7.7 96 84-205 167-266 (348)
361 2b5w_A Glucose dehydrogenase; 94.2 0.33 1.1E-05 39.3 9.7 97 80-205 162-272 (357)
362 3c85_A Putative glutathione-re 93.9 1.2 4.2E-05 32.0 11.6 111 85-220 39-152 (183)
363 3jyn_A Quinone oxidoreductase; 93.7 0.069 2.4E-06 42.7 4.6 97 82-205 138-238 (325)
364 1lss_A TRK system potassium up 93.7 1 3.5E-05 30.4 11.6 110 85-221 4-116 (140)
365 2eih_A Alcohol dehydrogenase; 93.6 0.33 1.1E-05 39.1 8.5 96 82-205 164-264 (343)
366 2j3h_A NADP-dependent oxidored 93.6 0.18 6.2E-06 40.5 6.9 96 81-205 152-254 (345)
367 3qwb_A Probable quinone oxidor 93.5 0.088 3E-06 42.3 4.9 99 81-205 145-246 (334)
368 2g1u_A Hypothetical protein TM 93.3 0.57 2E-05 32.9 8.4 113 83-220 17-131 (155)
369 4a2c_A Galactitol-1-phosphate 93.2 0.23 7.9E-06 39.9 7.0 98 81-205 157-259 (346)
370 1iz0_A Quinone oxidoreductase; 93.2 0.15 5.1E-06 40.3 5.7 92 82-205 123-217 (302)
371 3fbg_A Putative arginate lyase 93.2 0.26 8.9E-06 39.7 7.2 94 84-205 150-247 (346)
372 2dq4_A L-threonine 3-dehydroge 93.2 0.1 3.4E-06 42.1 4.7 94 84-205 164-261 (343)
373 4dup_A Quinone oxidoreductase; 93.0 0.22 7.5E-06 40.3 6.6 97 81-205 164-264 (353)
374 3goh_A Alcohol dehydrogenase, 93.0 0.18 6.3E-06 40.0 6.0 89 81-205 139-228 (315)
375 4f3n_A Uncharacterized ACR, CO 92.7 0.27 9.3E-06 41.0 6.8 44 85-128 138-187 (432)
376 3l9w_A Glutathione-regulated p 92.7 1.3 4.3E-05 36.8 10.9 111 85-220 4-115 (413)
377 4eez_A Alcohol dehydrogenase 1 92.7 0.49 1.7E-05 38.0 8.2 101 81-205 160-262 (348)
378 2j8z_A Quinone oxidoreductase; 92.5 0.41 1.4E-05 38.7 7.5 97 81-205 159-260 (354)
379 3llv_A Exopolyphosphatase-rela 92.5 1.7 5.9E-05 29.6 10.6 108 85-220 6-116 (141)
380 1qor_A Quinone oxidoreductase; 92.3 0.38 1.3E-05 38.3 7.1 96 82-205 138-238 (327)
381 1yb5_A Quinone oxidoreductase; 92.3 0.17 5.7E-06 41.0 4.9 97 81-205 167-268 (351)
382 3av4_A DNA (cytosine-5)-methyl 92.3 1.5 5.2E-05 41.8 11.8 45 84-128 850-895 (1330)
383 3ggo_A Prephenate dehydrogenas 91.9 2.2 7.5E-05 33.9 11.1 90 86-204 34-126 (314)
384 1wly_A CAAR, 2-haloacrylate re 91.9 0.29 1E-05 39.1 5.9 95 82-205 143-243 (333)
385 1g60_A Adenine-specific methyl 91.8 0.24 8.1E-06 38.3 5.1 76 144-222 5-92 (260)
386 2cf5_A Atccad5, CAD, cinnamyl 91.6 0.62 2.1E-05 37.7 7.6 96 81-205 176-274 (357)
387 1yqd_A Sinapyl alcohol dehydro 91.6 1 3.4E-05 36.6 8.8 96 81-205 183-281 (366)
388 3nx4_A Putative oxidoreductase 91.5 0.62 2.1E-05 37.0 7.4 90 87-205 149-240 (324)
389 1xa0_A Putative NADPH dependen 91.5 0.52 1.8E-05 37.5 7.0 96 82-205 146-245 (328)
390 1eg2_A Modification methylase 91.3 0.4 1.4E-05 38.4 6.1 62 144-208 39-108 (319)
391 2zb4_A Prostaglandin reductase 91.3 0.91 3.1E-05 36.6 8.3 98 81-205 155-259 (357)
392 3l4b_C TRKA K+ channel protien 91.1 2.1 7.2E-05 31.7 9.7 107 87-220 2-112 (218)
393 3iei_A Leucine carboxyl methyl 91.0 5.2 0.00018 32.1 15.6 119 84-205 90-229 (334)
394 4dkj_A Cytosine-specific methy 90.9 2.1 7.1E-05 35.4 10.1 44 85-128 10-59 (403)
395 3tqh_A Quinone oxidoreductase; 90.8 1.5 5.3E-05 34.7 9.1 94 80-205 148-244 (321)
396 3krt_A Crotonyl COA reductase; 90.5 1.4 4.7E-05 37.0 8.9 46 81-126 225-272 (456)
397 2zwa_A Leucine carboxyl methyl 90.4 2.2 7.4E-05 37.9 10.5 116 84-204 107-252 (695)
398 2cdc_A Glucose dehydrogenase g 90.2 1.4 4.7E-05 35.7 8.4 91 85-205 181-277 (366)
399 1tt7_A YHFP; alcohol dehydroge 90.0 0.76 2.6E-05 36.6 6.6 96 82-205 147-246 (330)
400 3iht_A S-adenosyl-L-methionine 89.9 0.86 2.9E-05 32.4 5.9 103 84-207 40-148 (174)
401 2vn8_A Reticulon-4-interacting 89.2 0.38 1.3E-05 39.2 4.4 97 82-205 181-279 (375)
402 3gqv_A Enoyl reductase; medium 89.2 1.8 6E-05 35.2 8.3 97 83-205 163-262 (371)
403 3gaz_A Alcohol dehydrogenase s 89.1 0.53 1.8E-05 37.8 5.1 95 81-205 147-245 (343)
404 2aef_A Calcium-gated potassium 88.9 3.1 0.00011 31.1 9.1 107 84-220 8-118 (234)
405 1id1_A Putative potassium chan 88.8 4.4 0.00015 28.0 10.3 111 85-220 3-118 (153)
406 2g5c_A Prephenate dehydrogenas 88.5 7.1 0.00024 30.0 11.6 88 87-204 3-94 (281)
407 2f1k_A Prephenate dehydrogenas 86.5 8.1 0.00028 29.6 10.4 87 87-206 2-90 (279)
408 4a0s_A Octenoyl-COA reductase/ 86.4 2.7 9.2E-05 35.0 8.0 46 81-126 217-264 (447)
409 2eez_A Alanine dehydrogenase; 86.3 0.61 2.1E-05 38.0 3.9 100 84-205 165-265 (369)
410 4g65_A TRK system potassium up 85.0 4.2 0.00014 34.2 8.5 99 85-209 3-105 (461)
411 3pi7_A NADH oxidoreductase; gr 84.9 4.2 0.00014 32.5 8.2 93 86-205 166-262 (349)
412 2vhw_A Alanine dehydrogenase; 84.7 0.39 1.3E-05 39.4 2.0 44 84-127 167-211 (377)
413 3ado_A Lambda-crystallin; L-gu 84.4 1.4 4.7E-05 35.3 5.0 110 84-208 5-125 (319)
414 4eso_A Putative oxidoreductase 84.1 12 0.0004 28.3 10.5 108 84-205 7-137 (255)
415 1pjc_A Protein (L-alanine dehy 83.9 0.46 1.6E-05 38.7 2.1 45 84-128 166-211 (361)
416 2hmt_A YUAA protein; RCK, KTN, 83.9 7.6 0.00026 26.0 8.8 108 85-220 6-117 (144)
417 3ce6_A Adenosylhomocysteinase; 83.3 2.9 9.8E-05 35.6 6.8 89 82-205 271-360 (494)
418 3pxx_A Carveol dehydrogenase; 82.8 13 0.00045 28.4 10.1 111 84-205 9-152 (287)
419 1lnq_A MTHK channels, potassiu 82.3 12 0.00043 29.5 10.0 106 85-220 115-224 (336)
420 3p2y_A Alanine dehydrogenase/p 81.8 0.55 1.9E-05 38.6 1.7 42 84-125 183-225 (381)
421 3oig_A Enoyl-[acyl-carrier-pro 81.8 15 0.0005 27.8 10.1 112 84-205 6-146 (266)
422 3ijr_A Oxidoreductase, short c 81.1 16 0.00055 28.2 10.0 111 84-205 46-181 (291)
423 1l7d_A Nicotinamide nucleotide 80.5 0.81 2.8E-05 37.5 2.3 42 84-125 171-213 (384)
424 2rir_A Dipicolinate synthase, 79.7 8.9 0.00031 30.0 8.2 88 84-205 156-245 (300)
425 3g0o_A 3-hydroxyisobutyrate de 79.6 15 0.0005 28.7 9.4 90 85-205 7-101 (303)
426 3d4o_A Dipicolinate synthase s 79.6 9.7 0.00033 29.6 8.3 89 84-205 154-243 (293)
427 4e12_A Diketoreductase; oxidor 79.1 13 0.00044 28.7 8.9 117 86-216 5-133 (283)
428 3d1l_A Putative NADP oxidoredu 78.9 17 0.00058 27.6 9.4 89 85-204 10-100 (266)
429 2ew2_A 2-dehydropantoate 2-red 78.9 20 0.0007 27.6 11.2 103 86-205 4-107 (316)
430 3c24_A Putative oxidoreductase 78.8 18 0.0006 27.9 9.6 85 86-203 12-98 (286)
431 3dmg_A Probable ribosomal RNA 78.8 25 0.00085 28.6 11.3 99 84-210 45-143 (381)
432 1zcj_A Peroxisomal bifunctiona 78.4 19 0.00064 30.2 10.1 107 86-207 38-151 (463)
433 4a27_A Synaptic vesicle membra 77.8 3.2 0.00011 33.2 5.1 96 81-205 139-237 (349)
434 3b1f_A Putative prephenate deh 77.1 23 0.00078 27.2 11.0 88 86-203 7-98 (290)
435 4dcm_A Ribosomal RNA large sub 76.6 18 0.00062 29.3 9.3 110 84-218 38-151 (375)
436 2i6t_A Ubiquitin-conjugating e 76.5 21 0.00072 28.1 9.4 114 84-218 13-137 (303)
437 3hwr_A 2-dehydropantoate 2-red 76.3 21 0.00072 28.0 9.5 100 84-205 18-119 (318)
438 3tri_A Pyrroline-5-carboxylate 75.8 10 0.00035 29.4 7.3 87 86-203 4-95 (280)
439 4fn4_A Short chain dehydrogena 74.9 11 0.00038 28.8 7.2 80 84-174 6-93 (254)
440 2hwk_A Helicase NSP2; rossman 74.7 3.4 0.00012 32.4 4.1 45 164-208 205-256 (320)
441 1wma_A Carbonyl reductase [NAD 74.6 20 0.00068 26.9 8.7 111 84-205 3-137 (276)
442 3r3s_A Oxidoreductase; structu 74.1 13 0.00045 28.8 7.7 111 84-205 48-184 (294)
443 3qha_A Putative oxidoreductase 73.9 22 0.00077 27.5 9.0 103 86-220 16-123 (296)
444 3k31_A Enoyl-(acyl-carrier-pro 73.8 14 0.00047 28.7 7.7 111 84-205 29-167 (296)
445 3ic5_A Putative saccharopine d 73.3 15 0.00052 23.4 7.6 69 85-174 5-78 (118)
446 1bg6_A N-(1-D-carboxylethyl)-L 73.2 15 0.0005 29.2 7.9 103 86-208 5-110 (359)
447 3zwc_A Peroxisomal bifunctiona 72.7 7.7 0.00026 34.8 6.5 107 86-208 317-431 (742)
448 3l77_A Short-chain alcohol deh 72.4 20 0.00069 26.4 8.1 81 85-175 2-90 (235)
449 4hp8_A 2-deoxy-D-gluconate 3-d 72.1 25 0.00085 26.8 8.5 77 84-173 8-87 (247)
450 2dpo_A L-gulonate 3-dehydrogen 71.9 31 0.0011 27.3 9.4 105 86-206 7-123 (319)
451 3gvp_A Adenosylhomocysteinase 71.7 12 0.00041 31.2 7.0 40 84-123 219-259 (435)
452 4dll_A 2-hydroxy-3-oxopropiona 71.6 31 0.0011 27.1 9.4 91 84-205 30-123 (320)
453 2cvz_A Dehydrogenase, 3-hydrox 71.5 31 0.0011 26.2 10.8 84 87-204 3-88 (289)
454 1zsy_A Mitochondrial 2-enoyl t 70.7 23 0.0008 28.2 8.6 45 81-125 164-214 (357)
455 3sx2_A Putative 3-ketoacyl-(ac 70.6 15 0.00051 28.0 7.1 82 84-176 12-113 (278)
456 1h2b_A Alcohol dehydrogenase; 70.5 7.2 0.00025 31.3 5.5 46 81-126 183-230 (359)
457 2h78_A Hibadh, 3-hydroxyisobut 70.4 35 0.0012 26.3 9.4 87 86-204 4-95 (302)
458 3jtm_A Formate dehydrogenase, 70.1 8.2 0.00028 31.2 5.7 106 84-220 163-274 (351)
459 4hy3_A Phosphoglycerate oxidor 70.1 9.1 0.00031 31.1 5.9 103 84-219 175-283 (365)
460 3tka_A Ribosomal RNA small sub 69.1 5.7 0.00019 32.0 4.4 35 183-217 251-287 (347)
461 4gx0_A TRKA domain protein; me 68.9 19 0.00063 30.9 8.0 107 86-220 128-237 (565)
462 2h7i_A Enoyl-[acyl-carrier-pro 68.8 28 0.00096 26.3 8.4 78 84-174 6-96 (269)
463 1ej6_A Lambda2; icosahedral, n 68.7 13 0.00043 34.8 6.8 103 82-204 819-924 (1289)
464 3gt0_A Pyrroline-5-carboxylate 68.7 4.8 0.00016 30.5 3.8 41 86-126 3-48 (247)
465 1wg8_A Predicted S-adenosylmet 68.5 5.5 0.00019 31.2 4.1 35 183-217 210-246 (285)
466 4e21_A 6-phosphogluconate dehy 67.5 22 0.00075 28.7 7.7 105 85-220 22-133 (358)
467 2g76_A 3-PGDH, D-3-phosphoglyc 67.4 10 0.00036 30.3 5.7 103 84-219 164-272 (335)
468 3ek2_A Enoyl-(acyl-carrier-pro 67.4 32 0.0011 25.8 8.5 112 83-205 12-152 (271)
469 1t2d_A LDH-P, L-lactate dehydr 67.3 44 0.0015 26.4 10.2 111 85-212 4-131 (322)
470 3imf_A Short chain dehydrogena 66.8 23 0.00079 26.6 7.5 80 84-174 5-92 (257)
471 2j6i_A Formate dehydrogenase; 66.6 7.7 0.00026 31.5 4.9 106 84-220 163-275 (364)
472 3ius_A Uncharacterized conserv 66.5 39 0.0013 25.5 12.4 66 86-176 6-74 (286)
473 3mog_A Probable 3-hydroxybutyr 66.4 47 0.0016 28.0 9.8 106 86-207 6-121 (483)
474 3n58_A Adenosylhomocysteinase; 66.4 17 0.00057 30.6 6.8 41 83-123 245-286 (464)
475 3is3_A 17BETA-hydroxysteroid d 66.2 31 0.001 26.2 8.1 111 84-205 17-151 (270)
476 3oj0_A Glutr, glutamyl-tRNA re 66.1 8.7 0.0003 26.2 4.5 42 83-126 19-63 (144)
477 1wwk_A Phosphoglycerate dehydr 66.0 9.8 0.00033 30.0 5.3 101 84-219 141-249 (307)
478 3tum_A Shikimate dehydrogenase 65.9 7.2 0.00024 30.2 4.3 115 83-220 123-241 (269)
479 4gwg_A 6-phosphogluconate dehy 65.9 30 0.001 29.3 8.4 110 86-220 5-121 (484)
480 3o38_A Short chain dehydrogena 65.8 28 0.00095 26.2 7.8 82 84-175 21-111 (266)
481 3h7a_A Short chain dehydrogena 65.5 16 0.00055 27.5 6.3 80 84-175 6-93 (252)
482 3h9u_A Adenosylhomocysteinase; 65.1 23 0.0008 29.5 7.5 41 84-124 210-251 (436)
483 3qiv_A Short-chain dehydrogena 64.7 21 0.00072 26.6 6.8 81 84-175 8-96 (253)
484 3rkr_A Short chain oxidoreduct 64.4 18 0.00062 27.3 6.4 82 83-175 27-116 (262)
485 2nac_A NAD-dependent formate d 64.4 11 0.00036 31.0 5.3 105 84-219 190-300 (393)
486 3ucx_A Short chain dehydrogena 64.0 29 0.001 26.2 7.6 79 84-173 10-96 (264)
487 3abi_A Putative uncharacterize 64.0 8.7 0.0003 31.0 4.7 69 84-173 15-85 (365)
488 1vpd_A Tartronate semialdehyde 63.9 36 0.0012 26.1 8.2 88 86-204 6-97 (299)
489 3tjr_A Short chain dehydrogena 63.7 25 0.00084 27.3 7.2 80 84-174 30-117 (301)
490 3pef_A 6-phosphogluconate dehy 63.6 26 0.00087 26.9 7.3 87 86-205 2-94 (287)
491 1jw9_B Molybdopterin biosynthe 63.6 7.7 0.00026 29.5 4.1 34 84-117 30-65 (249)
492 2gcg_A Glyoxylate reductase/hy 63.5 8.4 0.00029 30.7 4.5 102 84-219 154-263 (330)
493 3grk_A Enoyl-(acyl-carrier-pro 63.4 37 0.0013 26.2 8.2 112 83-205 29-168 (293)
494 3h2s_A Putative NADH-flavin re 63.1 40 0.0014 24.3 9.1 98 87-205 2-103 (224)
495 3nzo_A UDP-N-acetylglucosamine 62.6 29 0.001 28.2 7.7 87 84-177 34-124 (399)
496 3u5t_A 3-oxoacyl-[acyl-carrier 62.2 39 0.0013 25.6 8.0 111 84-205 26-160 (267)
497 3v8b_A Putative dehydrogenase, 62.0 36 0.0012 26.1 7.8 81 84-175 27-115 (283)
498 3o26_A Salutaridine reductase; 62.0 28 0.00095 26.7 7.3 82 84-175 11-101 (311)
499 3rku_A Oxidoreductase YMR226C; 61.9 31 0.0011 26.5 7.5 83 84-175 32-125 (287)
500 2w2k_A D-mandelate dehydrogena 61.9 11 0.00038 30.3 5.0 104 84-218 162-272 (348)
No 1
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.88 E-value=1.3e-21 Score=157.38 Aligned_cols=144 Identities=45% Similarity=0.783 Sum_probs=118.5
Q ss_pred CceehhhhHHHHHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCC
Q 027388 62 PIIHLKKLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFS 141 (224)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~ 141 (224)
....+..+..|+...+......++.+|||||||+|.++..++.....+++|+|+|+.+++.|++++.. .+..
T Consensus 42 ~~~~~~~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~--------~~~~ 113 (298)
T 1ri5_A 42 KTINIRNANNFIKACLIRLYTKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARN--------MKRR 113 (298)
T ss_dssp CSHHHHHHHHHHHHHHHHHHCCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHT--------SCCS
T ss_pred hhhhHHHHHHHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHh--------cCCC
Confidence 33455677788877776666778899999999999999988766666999999999999999998762 2333
Q ss_pred CCeeEEeccccccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCChHHHHHHhh
Q 027388 142 FPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVIIKKLR 217 (224)
Q Consensus 142 ~~v~~~~~d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~~~~~~~~~ 217 (224)
.++.++++|+.+.+.. ..++||+|++..+++|++.+..++..+++++.++|+|||.+++.+++...+...+.
T Consensus 114 ~~v~~~~~d~~~~~~~----~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~ 185 (298)
T 1ri5_A 114 FKVFFRAQDSYGRHMD----LGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVILERYK 185 (298)
T ss_dssp SEEEEEESCTTTSCCC----CSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHHHH
T ss_pred ccEEEEECCccccccC----CCCCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHc
Confidence 4689999999877541 35789999999999885557789999999999999999999999999888777655
No 2
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.87 E-value=3.3e-21 Score=152.64 Aligned_cols=108 Identities=21% Similarity=0.415 Sum_probs=93.5
Q ss_pred hhcCCCeEEEecCCCchhHHHHHhh---cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccc
Q 027388 81 YARRGDVVLDLACGKGGDLIKWDKA---KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD 157 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~G~~~~~l~~~---~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 157 (224)
.+.++.+|||||||+|..+..+++. ...+|+|||+|+.|++.|++++.. .+...+++++++|+.+++.
T Consensus 67 ~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~--------~~~~~~v~~~~~D~~~~~~- 137 (261)
T 4gek_A 67 FVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDA--------YKAPTPVDVIEGDIRDIAI- 137 (261)
T ss_dssp HCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHT--------SCCSSCEEEEESCTTTCCC-
T ss_pred hCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHh--------hccCceEEEeecccccccc-
Confidence 4678899999999999999998764 245899999999999999999762 3445679999999988764
Q ss_pred cccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 158 KVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 158 ~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
+.||+|+++.+++|+ +..+...++++++++|||||+|++.
T Consensus 138 ------~~~d~v~~~~~l~~~--~~~~~~~~l~~i~~~LkpGG~lii~ 177 (261)
T 4gek_A 138 ------ENASMVVLNFTLQFL--EPSERQALLDKIYQGLNPGGALVLS 177 (261)
T ss_dssp ------CSEEEEEEESCGGGS--CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ------cccccceeeeeeeec--CchhHhHHHHHHHHHcCCCcEEEEE
Confidence 569999999999998 6778889999999999999999986
No 3
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.86 E-value=8e-22 Score=154.38 Aligned_cols=123 Identities=15% Similarity=0.173 Sum_probs=103.1
Q ss_pred CCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCCC
Q 027388 84 RGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADD 163 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 163 (224)
++.+|||||||+|.++..++.....+++++|+|+.+++.|++++... + ..++.++++|+.+++. ..
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~--------~-~~~~~~~~~d~~~~~~-----~~ 144 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEE--------G-KRVRNYFCCGLQDFTP-----EP 144 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGG--------G-GGEEEEEECCGGGCCC-----CS
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhc--------C-CceEEEEEcChhhcCC-----CC
Confidence 57899999999999999887666669999999999999999997621 1 2358899999887765 45
Q ss_pred CCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeC-----------------ChHHHHHHhhhcccc
Q 027388 164 APFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP-----------------DANVIIKKLREEHFC 222 (224)
Q Consensus 164 ~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~-----------------~~~~~~~~~~~~gf~ 222 (224)
+.||+|++..+++|+ +.+....+++++.++|+|||+|++..+ ....+.+.++++||.
T Consensus 145 ~~fD~v~~~~~l~~~--~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 218 (241)
T 2ex4_A 145 DSYDVIWIQWVIGHL--TDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLS 218 (241)
T ss_dssp SCEEEEEEESCGGGS--CHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCC
T ss_pred CCEEEEEEcchhhhC--CHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCe
Confidence 689999999999998 555677999999999999999999643 457888999999985
No 4
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.86 E-value=8e-21 Score=147.85 Aligned_cols=143 Identities=15% Similarity=0.248 Sum_probs=108.1
Q ss_pred hhhHHHHHHHHHHhhhccccchhhhccCCceehhhhHHHHHHHHHHHh-hcCCCeEEEecCCCchhHHHHHhhc-CCeEE
Q 027388 34 ESTKVFARKVADHYSRRTNQTLEEREASPIIHLKKLNNWIKSVLVQLY-ARRGDVVLDLACGKGGDLIKWDKAK-IGYYV 111 (224)
Q Consensus 34 ~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~iLDiGcG~G~~~~~l~~~~-~~~~~ 111 (224)
+...++|+..+..|+....... .........++..+. ..++.+|||+|||+|.++..++... ..+++
T Consensus 4 ~~~~~~f~~~a~~y~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~ 72 (234)
T 3dtn_A 4 SEIKRKFDAVSGKYDEQRRKFI-----------PCFDDFYGVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFT 72 (234)
T ss_dssp CSSCCCCCHHHHHHHHHHHHHC-----------TTHHHHHHHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEE
T ss_pred HHHHHHHHHHHHHHHHhHHHhC-----------cCHHHHHHHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEE
Confidence 3445577777888875332211 112222333333332 4567899999999999999988664 56999
Q ss_pred EEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHH
Q 027388 112 GIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALAN 191 (224)
Q Consensus 112 gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~ 191 (224)
|+|+|+.+++.|++++... . ++.++++|+.+.+. .+.||+|++..+++|+ +..+...++++
T Consensus 73 ~vD~s~~~~~~a~~~~~~~----------~-~~~~~~~d~~~~~~------~~~fD~v~~~~~l~~~--~~~~~~~~l~~ 133 (234)
T 3dtn_A 73 LVDMSEKMLEIAKNRFRGN----------L-KVKYIEADYSKYDF------EEKYDMVVSALSIHHL--EDEDKKELYKR 133 (234)
T ss_dssp EEESCHHHHHHHHHHTCSC----------T-TEEEEESCTTTCCC------CSCEEEEEEESCGGGS--CHHHHHHHHHH
T ss_pred EEECCHHHHHHHHHhhccC----------C-CEEEEeCchhccCC------CCCceEEEEeCccccC--CHHHHHHHHHH
Confidence 9999999999999997621 2 69999999988775 3899999999999998 55666789999
Q ss_pred HHhhccCCeEEEEEe
Q 027388 192 VSALLRPGGTFIGTM 206 (224)
Q Consensus 192 ~~~~lk~gG~li~~~ 206 (224)
+.++|+|||++++..
T Consensus 134 ~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 134 SYSILKESGIFINAD 148 (234)
T ss_dssp HHHHEEEEEEEEEEE
T ss_pred HHHhcCCCcEEEEEE
Confidence 999999999999875
No 5
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.85 E-value=1e-20 Score=151.63 Aligned_cols=152 Identities=20% Similarity=0.227 Sum_probs=106.4
Q ss_pred chhhHHHHHHHHHHhhhccccchhhhccCCceehhhhHHHHHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEE
Q 027388 33 DESTKVFARKVADHYSRRTNQTLEEREASPIIHLKKLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVG 112 (224)
Q Consensus 33 ~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~g 112 (224)
+......|+.++..|+............ .......+..++..+ ..++.+|||||||+|.++..++.. ..+++|
T Consensus 23 ~~~~~~~fd~~a~~y~~~~~~~~~~~~~-----~~~~~~~l~~~l~~~-~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~g 95 (285)
T 4htf_A 23 NAMQDRNFDDIAEKFSRNIYGTTKGQLR-----QAILWQDLDRVLAEM-GPQKLRVLDAGGGEGQTAIKMAER-GHQVIL 95 (285)
T ss_dssp ---------CHHHHHHSCTTSCHHHHHH-----HHHHHHHHHHHHHHT-CSSCCEEEEETCTTCHHHHHHHHT-TCEEEE
T ss_pred ccccccchhhHHHHHHHHhccCCcchHH-----HHHHHHHHHHHHHhc-CCCCCEEEEeCCcchHHHHHHHHC-CCEEEE
Confidence 3445568899999998544333211110 011122233333333 234679999999999999998866 569999
Q ss_pred EeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccc-cccccCCCCCeeEEEEccccccccCCHHHHHHHHHH
Q 027388 113 IDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH-LDKVLADDAPFDICSCQFAMHYSWSTEARARRALAN 191 (224)
Q Consensus 113 vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~ 191 (224)
+|+|+.+++.|++++.. .++..++.++++|+.+++ . ..++||+|++..+++|+ +++..++++
T Consensus 96 vD~s~~~~~~a~~~~~~--------~~~~~~v~~~~~d~~~~~~~-----~~~~fD~v~~~~~l~~~----~~~~~~l~~ 158 (285)
T 4htf_A 96 CDLSAQMIDRAKQAAEA--------KGVSDNMQFIHCAAQDVASH-----LETPVDLILFHAVLEWV----ADPRSVLQT 158 (285)
T ss_dssp EESCHHHHHHHHHHHHC---------CCGGGEEEEESCGGGTGGG-----CSSCEEEEEEESCGGGC----SCHHHHHHH
T ss_pred EECCHHHHHHHHHHHHh--------cCCCcceEEEEcCHHHhhhh-----cCCCceEEEECchhhcc----cCHHHHHHH
Confidence 99999999999999762 334456899999998876 3 46899999999999998 567899999
Q ss_pred HHhhccCCeEEEEEeCC
Q 027388 192 VSALLRPGGTFIGTMPD 208 (224)
Q Consensus 192 ~~~~lk~gG~li~~~~~ 208 (224)
+.++|+|||++++.+++
T Consensus 159 ~~~~LkpgG~l~~~~~~ 175 (285)
T 4htf_A 159 LWSVLRPGGVLSLMFYN 175 (285)
T ss_dssp HHHTEEEEEEEEEEEEB
T ss_pred HHHHcCCCeEEEEEEeC
Confidence 99999999999998754
No 6
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.85 E-value=5.5e-20 Score=144.68 Aligned_cols=134 Identities=13% Similarity=0.113 Sum_probs=111.2
Q ss_pred HHHHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecc
Q 027388 71 NWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGD 150 (224)
Q Consensus 71 ~~~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d 150 (224)
.+...++..+...++.+|||||||+|.++..++......++++|+|+.+++.+++++.. ..++.++++|
T Consensus 80 ~~~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~-----------~~~~~~~~~d 148 (254)
T 1xtp_A 80 EGSRNFIASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAG-----------MPVGKFILAS 148 (254)
T ss_dssp HHHHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTT-----------SSEEEEEESC
T ss_pred HHHHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhcc-----------CCceEEEEcc
Confidence 44455555555567889999999999999988766666899999999999999998762 1458999999
Q ss_pred ccccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeC------------------ChHHH
Q 027388 151 CYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP------------------DANVI 212 (224)
Q Consensus 151 ~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~------------------~~~~~ 212 (224)
+..++. +.++||+|++..+++|+ +..++..+++++.++|+|||++++..+ ....+
T Consensus 149 ~~~~~~-----~~~~fD~v~~~~~l~~~--~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (254)
T 1xtp_A 149 METATL-----PPNTYDLIVIQWTAIYL--TDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHY 221 (254)
T ss_dssp GGGCCC-----CSSCEEEEEEESCGGGS--CHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHH
T ss_pred HHHCCC-----CCCCeEEEEEcchhhhC--CHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHH
Confidence 987765 46799999999999998 557899999999999999999999763 23678
Q ss_pred HHHhhhcccc
Q 027388 213 IKKLREEHFC 222 (224)
Q Consensus 213 ~~~~~~~gf~ 222 (224)
...++++||.
T Consensus 222 ~~~l~~aGf~ 231 (254)
T 1xtp_A 222 KRLFNESGVR 231 (254)
T ss_dssp HHHHHHHTCC
T ss_pred HHHHHHCCCE
Confidence 8899999985
No 7
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.85 E-value=5.9e-21 Score=145.51 Aligned_cols=155 Identities=11% Similarity=0.045 Sum_probs=118.3
Q ss_pred hhhHHHHHHHHHHhhhccccchhhhccCCceehhhhHHHHHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEE
Q 027388 34 ESTKVFARKVADHYSRRTNQTLEEREASPIIHLKKLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGI 113 (224)
Q Consensus 34 ~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gv 113 (224)
+....+|+..+..|+......... ......++..++ ...+.+|||+|||+|.++..++.. ..+++|+
T Consensus 3 ~~~~~~y~~~a~~y~~~~~~~~~~--------~~~~~~~l~~~~----~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gv 69 (203)
T 3h2b_A 3 DDVSKAYSSPTFDAEALLGTVISA--------EDPDRVLIEPWA----TGVDGVILDVGSGTGRWTGHLASL-GHQIEGL 69 (203)
T ss_dssp CHHHHHHHCTTTCHHHHTCSSCCT--------TCTTHHHHHHHH----HHCCSCEEEETCTTCHHHHHHHHT-TCCEEEE
T ss_pred HHHHHHHhhHHHHHHHHhhhhccc--------cHHHHHHHHHHh----ccCCCeEEEecCCCCHHHHHHHhc-CCeEEEE
Confidence 345678888888886443221100 011222233222 223889999999999999988765 4599999
Q ss_pred eCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHH
Q 027388 114 DIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVS 193 (224)
Q Consensus 114 D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~ 193 (224)
|+|+.+++.++++.. ++.++++|+.+++. +.+.||+|++..+++|+ +..++..+++++.
T Consensus 70 D~s~~~~~~a~~~~~--------------~~~~~~~d~~~~~~-----~~~~fD~v~~~~~l~~~--~~~~~~~~l~~~~ 128 (203)
T 3h2b_A 70 EPATRLVELARQTHP--------------SVTFHHGTITDLSD-----SPKRWAGLLAWYSLIHM--GPGELPDALVALR 128 (203)
T ss_dssp CCCHHHHHHHHHHCT--------------TSEEECCCGGGGGG-----SCCCEEEEEEESSSTTC--CTTTHHHHHHHHH
T ss_pred eCCHHHHHHHHHhCC--------------CCeEEeCccccccc-----CCCCeEEEEehhhHhcC--CHHHHHHHHHHHH
Confidence 999999999998854 48999999988775 56899999999999998 4457899999999
Q ss_pred hhccCCeEEEEEeC------------------ChHHHHHHhhhcccc
Q 027388 194 ALLRPGGTFIGTMP------------------DANVIIKKLREEHFC 222 (224)
Q Consensus 194 ~~lk~gG~li~~~~------------------~~~~~~~~~~~~gf~ 222 (224)
++|+|||.+++.++ ....+...++++||.
T Consensus 129 ~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 175 (203)
T 3h2b_A 129 MAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQ 175 (203)
T ss_dssp HTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEE
T ss_pred HHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCc
Confidence 99999999998753 357888999999985
No 8
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.84 E-value=1.5e-20 Score=143.69 Aligned_cols=128 Identities=18% Similarity=0.171 Sum_probs=95.3
Q ss_pred hHHHHHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCccccccc---ccCCCCee
Q 027388 69 LNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRR---KKFSFPAR 145 (224)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~---~~~~~~v~ 145 (224)
....+..++..+...++.+|||+|||+|..+..+++.+ .+|+|+|+|+.|++.|+++........... .....+++
T Consensus 7 ~~~~l~~~~~~l~~~~~~~vLD~GCG~G~~~~~la~~g-~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~ 85 (203)
T 1pjz_A 7 VNKDLQQYWSSLNVVPGARVLVPLCGKSQDMSWLSGQG-YHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIE 85 (203)
T ss_dssp STHHHHHHHHHHCCCTTCEEEETTTCCSHHHHHHHHHC-CEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSE
T ss_pred CCHHHHHHHHhcccCCCCEEEEeCCCCcHhHHHHHHCC-CeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccE
Confidence 33445555555555678899999999999999988664 499999999999999998754100000000 00124689
Q ss_pred EEeccccccccccccCCC-CCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEE
Q 027388 146 LICGDCYEVHLDKVLADD-APFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIG 204 (224)
Q Consensus 146 ~~~~d~~~~~~~~~~~~~-~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~ 204 (224)
++++|+.+++. .. ++||+|++..+++++ +.++...+++++.++|||||++++
T Consensus 86 ~~~~d~~~l~~-----~~~~~fD~v~~~~~l~~l--~~~~~~~~l~~~~r~LkpgG~~~l 138 (203)
T 1pjz_A 86 IWCGDFFALTA-----RDIGHCAAFYDRAAMIAL--PADMRERYVQHLEALMPQACSGLL 138 (203)
T ss_dssp EEEECCSSSTH-----HHHHSEEEEEEESCGGGS--CHHHHHHHHHHHHHHSCSEEEEEE
T ss_pred EEECccccCCc-----ccCCCEEEEEECcchhhC--CHHHHHHHHHHHHHHcCCCcEEEE
Confidence 99999988775 22 689999999999988 667788899999999999998443
No 9
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.84 E-value=5e-20 Score=141.19 Aligned_cols=148 Identities=17% Similarity=0.177 Sum_probs=118.1
Q ss_pred chhhHHHHHHHHHHhhhccccchhhhccCCceehhhhHHHHHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEE
Q 027388 33 DESTKVFARKVADHYSRRTNQTLEEREASPIIHLKKLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVG 112 (224)
Q Consensus 33 ~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~g 112 (224)
+.....+|+..+..|...... ...+..++.. ..++.+|||+|||+|.++..++.. ..+++|
T Consensus 10 ~~~~~~~~~~~~~~y~~~~~~----------------~~~~~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~ 70 (211)
T 3e23_A 10 DDDTLRFYRGNATAYAERQPR----------------SATLTKFLGE--LPAGAKILELGCGAGYQAEAMLAA-GFDVDA 70 (211)
T ss_dssp CHHHHHHHHHSHHHHTTCCCC----------------CHHHHHHHTT--SCTTCEEEESSCTTSHHHHHHHHT-TCEEEE
T ss_pred cHHHHHHHHHHHHHHhhccch----------------hHHHHHHHHh--cCCCCcEEEECCCCCHHHHHHHHc-CCeEEE
Confidence 355678899888888753332 1222223222 356789999999999999988765 459999
Q ss_pred EeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHH
Q 027388 113 IDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANV 192 (224)
Q Consensus 113 vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~ 192 (224)
+|+|+.+++.++++.. +.+.++|+..++ ..+.||+|++..+++|+ +.+++..+++++
T Consensus 71 vD~s~~~~~~a~~~~~---------------~~~~~~d~~~~~------~~~~fD~v~~~~~l~~~--~~~~~~~~l~~~ 127 (211)
T 3e23_A 71 TDGSPELAAEASRRLG---------------RPVRTMLFHQLD------AIDAYDAVWAHACLLHV--PRDELADVLKLI 127 (211)
T ss_dssp EESCHHHHHHHHHHHT---------------SCCEECCGGGCC------CCSCEEEEEECSCGGGS--CHHHHHHHHHHH
T ss_pred ECCCHHHHHHHHHhcC---------------CceEEeeeccCC------CCCcEEEEEecCchhhc--CHHHHHHHHHHH
Confidence 9999999999998864 778889987766 36899999999999998 567899999999
Q ss_pred HhhccCCeEEEEEeC-----------------ChHHHHHHhhhcc-cc
Q 027388 193 SALLRPGGTFIGTMP-----------------DANVIIKKLREEH-FC 222 (224)
Q Consensus 193 ~~~lk~gG~li~~~~-----------------~~~~~~~~~~~~g-f~ 222 (224)
.++|+|||++++.++ ....+...++++| |.
T Consensus 128 ~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~ 175 (211)
T 3e23_A 128 WRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWA 175 (211)
T ss_dssp HHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCS
T ss_pred HHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcE
Confidence 999999999998744 4568889999999 85
No 10
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.84 E-value=2.4e-20 Score=145.93 Aligned_cols=138 Identities=13% Similarity=0.152 Sum_probs=94.1
Q ss_pred hhhHHHHHHHHHHhhhccccchhhhccCCceehhhhHHHHHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEE
Q 027388 34 ESTKVFARKVADHYSRRTNQTLEEREASPIIHLKKLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGI 113 (224)
Q Consensus 34 ~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gv 113 (224)
....++|+..+..|...... .....++...+. ...++.+|||||||+|.++..++... .+++|+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~l~--~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gv 70 (250)
T 2p7i_A 7 NYDQEIKDTAGHKYAYNFDF-------------DVMHPFMVRAFT--PFFRPGNLLELGSFKGDFTSRLQEHF-NDITCV 70 (250)
T ss_dssp ----------------CHHH-------------HTHHHHHHHHHG--GGCCSSCEEEESCTTSHHHHHHTTTC-SCEEEE
T ss_pred CCCHHHHhhHHHHhcCccch-------------hhHHHHHHHHHH--hhcCCCcEEEECCCCCHHHHHHHHhC-CcEEEE
Confidence 33467888888777531111 111122222222 23467899999999999999887554 489999
Q ss_pred eCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHH
Q 027388 114 DIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVS 193 (224)
Q Consensus 114 D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~ 193 (224)
|+|+.+++.|+++.. . ++.++++|+.+.. .+++||+|++..+++|+ +++..+++++.
T Consensus 71 D~s~~~~~~a~~~~~------------~-~v~~~~~d~~~~~------~~~~fD~v~~~~~l~~~----~~~~~~l~~~~ 127 (250)
T 2p7i_A 71 EASEEAISHAQGRLK------------D-GITYIHSRFEDAQ------LPRRYDNIVLTHVLEHI----DDPVALLKRIN 127 (250)
T ss_dssp ESCHHHHHHHHHHSC------------S-CEEEEESCGGGCC------CSSCEEEEEEESCGGGC----SSHHHHHHHHH
T ss_pred eCCHHHHHHHHHhhh------------C-CeEEEEccHHHcC------cCCcccEEEEhhHHHhh----cCHHHHHHHHH
Confidence 999999999999876 2 5899999988763 46889999999999998 56789999999
Q ss_pred -hhccCCeEEEEEeCChH
Q 027388 194 -ALLRPGGTFIGTMPDAN 210 (224)
Q Consensus 194 -~~lk~gG~li~~~~~~~ 210 (224)
++|||||++++.+++..
T Consensus 128 ~~~LkpgG~l~i~~~~~~ 145 (250)
T 2p7i_A 128 DDWLAEGGRLFLVCPNAN 145 (250)
T ss_dssp HTTEEEEEEEEEEEECTT
T ss_pred HHhcCCCCEEEEEcCChH
Confidence 99999999999887643
No 11
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.84 E-value=3e-20 Score=145.19 Aligned_cols=156 Identities=19% Similarity=0.289 Sum_probs=104.9
Q ss_pred hhhHHHHHHHHHHhhhccccchhhhccCCceehhhhHHHHHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEE
Q 027388 34 ESTKVFARKVADHYSRRTNQTLEEREASPIIHLKKLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGI 113 (224)
Q Consensus 34 ~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gv 113 (224)
+....+|+..+..|+........... ...+..++.. ...++.+|||||||+|.++..++.. ..+++|+
T Consensus 14 ~~~~~~~~~~a~~~~~~~~~~~~~~~------~~~~~~~l~~-----~~~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~v 81 (242)
T 3l8d_A 14 ESAEKKWDSSAEFWNQNSQEMWDSGS------RSTIIPFFEQ-----YVKKEAEVLDVGCGDGYGTYKLSRT-GYKAVGV 81 (242)
T ss_dssp ------------------CHHHHTST------TTTHHHHHHH-----HSCTTCEEEEETCTTSHHHHHHHHT-TCEEEEE
T ss_pred HHHHHHHHhHHHHhhhhhhhccCccc------HHHHHHHHHH-----HcCCCCeEEEEcCCCCHHHHHHHHc-CCeEEEE
Confidence 34567888888888753322111100 1122222211 2357889999999999999998865 4589999
Q ss_pred eCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHH
Q 027388 114 DIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVS 193 (224)
Q Consensus 114 D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~ 193 (224)
|+|+.+++.++++.. ..++.++++|+.+++. +.++||+|++..+++|+ +++..+++++.
T Consensus 82 D~s~~~~~~a~~~~~------------~~~~~~~~~d~~~~~~-----~~~~fD~v~~~~~l~~~----~~~~~~l~~~~ 140 (242)
T 3l8d_A 82 DISEVMIQKGKERGE------------GPDLSFIKGDLSSLPF-----ENEQFEAIMAINSLEWT----EEPLRALNEIK 140 (242)
T ss_dssp ESCHHHHHHHHTTTC------------BTTEEEEECBTTBCSS-----CTTCEEEEEEESCTTSS----SCHHHHHHHHH
T ss_pred ECCHHHHHHHHhhcc------------cCCceEEEcchhcCCC-----CCCCccEEEEcChHhhc----cCHHHHHHHHH
Confidence 999999999998854 4568999999988775 57899999999999998 56789999999
Q ss_pred hhccCCeEEEEEeCC------------------------hHHHHHHhhhcccc
Q 027388 194 ALLRPGGTFIGTMPD------------------------ANVIIKKLREEHFC 222 (224)
Q Consensus 194 ~~lk~gG~li~~~~~------------------------~~~~~~~~~~~gf~ 222 (224)
++|+|||++++.+++ ...+...++++||.
T Consensus 141 ~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 193 (242)
T 3l8d_A 141 RVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFK 193 (242)
T ss_dssp HHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEE
T ss_pred HHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCE
Confidence 999999999998632 34677888888874
No 12
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.83 E-value=9.8e-20 Score=140.34 Aligned_cols=142 Identities=18% Similarity=0.145 Sum_probs=95.3
Q ss_pred HHHHHHHHHHhhhccccchhhhccCCceehhhhHHHHHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCC
Q 027388 37 KVFARKVADHYSRRTNQTLEEREASPIIHLKKLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIA 116 (224)
Q Consensus 37 ~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s 116 (224)
.++|+..+..|+.......... .........++..+...++.+|||+|||+|.++..++.. ..+++|+|+|
T Consensus 6 ~~~f~~~a~~y~~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s 76 (220)
T 3hnr_A 6 NGLFDEWAHTYDSFVQGEDIQY--------KEVFAHYEDILEDVVNKSFGNVLEFGVGTGNLTNKLLLA-GRTVYGIEPS 76 (220)
T ss_dssp ------------------CCTT--------TTTTTTHHHHHHHHHHTCCSEEEEECCTTSHHHHHHHHT-TCEEEEECSC
T ss_pred HHHHHHHHHHHHHHhhcchHhH--------HHHHHHHHHHHHHhhccCCCeEEEeCCCCCHHHHHHHhC-CCeEEEEeCC
Confidence 3578888888875442111111 111112233444444568889999999999999998765 5699999999
Q ss_pred hhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhc
Q 027388 117 EGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALL 196 (224)
Q Consensus 117 ~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~l 196 (224)
+.+++.+++++. .++.++++|+.+++. . ++||+|++..+++|+ .......+++++.++|
T Consensus 77 ~~~~~~a~~~~~-------------~~~~~~~~d~~~~~~-----~-~~fD~v~~~~~l~~~--~~~~~~~~l~~~~~~L 135 (220)
T 3hnr_A 77 REMRMIAKEKLP-------------KEFSITEGDFLSFEV-----P-TSIDTIVSTYAFHHL--TDDEKNVAIAKYSQLL 135 (220)
T ss_dssp HHHHHHHHHHSC-------------TTCCEESCCSSSCCC-----C-SCCSEEEEESCGGGS--CHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhCC-------------CceEEEeCChhhcCC-----C-CCeEEEEECcchhcC--ChHHHHHHHHHHHHhc
Confidence 999999998854 248899999988765 4 899999999999998 4444556999999999
Q ss_pred cCCeEEEEEeCC
Q 027388 197 RPGGTFIGTMPD 208 (224)
Q Consensus 197 k~gG~li~~~~~ 208 (224)
+|||.+++..++
T Consensus 136 kpgG~l~i~~~~ 147 (220)
T 3hnr_A 136 NKGGKIVFADTI 147 (220)
T ss_dssp CTTCEEEEEEEC
T ss_pred CCCCEEEEEecc
Confidence 999999998543
No 13
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.83 E-value=1.7e-20 Score=151.56 Aligned_cols=142 Identities=26% Similarity=0.363 Sum_probs=102.1
Q ss_pred hhhHHHHHHHHHHHhh-------cCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCccccccccc
Q 027388 67 KKLNNWIKSVLVQLYA-------RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKK 139 (224)
Q Consensus 67 ~~~~~~~~~~~~~~~~-------~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~ 139 (224)
+.+..|++..+..... .++.+|||||||+|..+..++......|+|+|+|+.|++.|+++.... .
T Consensus 24 ~~~nn~vks~li~~~~~~~~~~~~~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~--------~ 95 (302)
T 2vdw_A 24 GILSNYVKTLLISMYCSKTFLDDSNKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKL--------N 95 (302)
T ss_dssp HHHHHHHHHHHHHHHTCTTTSSCCSCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHH--------C
T ss_pred HHHHHHHHHHHHHHHHhhhhhccCCCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhc--------c
Confidence 4455566655544322 246899999999998887776666678999999999999999987521 1
Q ss_pred CC-----CCeeEEeccccccccc-cc--cCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCChHH
Q 027388 140 FS-----FPARLICGDCYEVHLD-KV--LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANV 211 (224)
Q Consensus 140 ~~-----~~v~~~~~d~~~~~~~-~~--~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~~~ 211 (224)
.. .++.|.+.|+...... .. ..+.++||+|+|..++||++... +...+++++.++|||||+|++++++...
T Consensus 96 ~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~~~FD~V~~~~~lhy~~~~~-~~~~~l~~~~r~LkpGG~~i~~~~~~~~ 174 (302)
T 2vdw_A 96 SGIKTKYYKFDYIQETIRSDTFVSSVREVFYFGKFNIIDWQFAIHYSFHPR-HYATVMNNLSELTASGGKVLITTMDGDK 174 (302)
T ss_dssp C----CCCEEEEEECCTTSSSHHHHHHTTCCSSCEEEEEEESCGGGTCSTT-THHHHHHHHHHHEEEEEEEEEEEECHHH
T ss_pred ccccccccccchhhhhcccchhhhhhhccccCCCeeEEEECchHHHhCCHH-HHHHHHHHHHHHcCCCCEEEEEeCCHHH
Confidence 11 1256777777321100 00 01357999999999999876544 4679999999999999999999999887
Q ss_pred HHHHhh
Q 027388 212 IIKKLR 217 (224)
Q Consensus 212 ~~~~~~ 217 (224)
+...+.
T Consensus 175 ~~~~~~ 180 (302)
T 2vdw_A 175 LSKLTD 180 (302)
T ss_dssp HTTCCS
T ss_pred HHHHHh
Confidence 776554
No 14
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.83 E-value=5.7e-20 Score=144.70 Aligned_cols=105 Identities=21% Similarity=0.301 Sum_probs=92.5
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccC
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (224)
..++.+|||||||+|.++..++.....+++|+|+|+.+++.++++.. ..++.++++|+.+++.
T Consensus 42 ~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~------------~~~~~~~~~d~~~~~~----- 104 (253)
T 3g5l_A 42 DFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT------------SPVVCYEQKAIEDIAI----- 104 (253)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC------------CTTEEEEECCGGGCCC-----
T ss_pred ccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc------------cCCeEEEEcchhhCCC-----
Confidence 34788999999999999999887665699999999999999999875 4468999999987765
Q ss_pred CCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeC
Q 027388 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~ 207 (224)
+.++||+|++..+++|+ .++..+++++.++|+|||.|++.++
T Consensus 105 ~~~~fD~v~~~~~l~~~----~~~~~~l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 105 EPDAYNVVLSSLALHYI----ASFDDICKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp CTTCEEEEEEESCGGGC----SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCeEEEEEchhhhhh----hhHHHHHHHHHHHcCCCcEEEEEeC
Confidence 56899999999999998 6688999999999999999999754
No 15
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.83 E-value=1.2e-19 Score=144.28 Aligned_cols=118 Identities=25% Similarity=0.398 Sum_probs=98.5
Q ss_pred HHHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccc
Q 027388 72 WIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDC 151 (224)
Q Consensus 72 ~~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~ 151 (224)
....++..+...++.+|||||||+|.++..++.....+++|+|+|+.+++.+++++. ..++..++.++++|+
T Consensus 49 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~--------~~~~~~~~~~~~~d~ 120 (273)
T 3bus_A 49 LTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARAT--------AAGLANRVTFSYADA 120 (273)
T ss_dssp HHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHH--------HTTCTTTEEEEECCT
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHH--------hcCCCcceEEEECcc
Confidence 344444455556788999999999999999887656799999999999999999876 234455799999999
Q ss_pred cccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEe
Q 027388 152 YEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (224)
Q Consensus 152 ~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~ 206 (224)
.+++. +.++||+|++..+++|+ .+...+++++.++|+|||.+++..
T Consensus 121 ~~~~~-----~~~~fD~v~~~~~l~~~----~~~~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 121 MDLPF-----EDASFDAVWALESLHHM----PDRGRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp TSCCS-----CTTCEEEEEEESCTTTS----SCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred ccCCC-----CCCCccEEEEechhhhC----CCHHHHHHHHHHHcCCCeEEEEEE
Confidence 88765 56899999999999998 556899999999999999999874
No 16
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.83 E-value=1.7e-19 Score=138.47 Aligned_cols=115 Identities=14% Similarity=0.186 Sum_probs=95.2
Q ss_pred HHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccc
Q 027388 74 KSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYE 153 (224)
Q Consensus 74 ~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~ 153 (224)
..++......++ +|||+|||+|.++..++.....+++++|+|+.+++.|++++. ..++..++.++++|+.+
T Consensus 34 ~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~--------~~~~~~~~~~~~~d~~~ 104 (219)
T 3dlc_A 34 ENIINRFGITAG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIA--------DANLNDRIQIVQGDVHN 104 (219)
T ss_dssp HHHHHHHCCCEE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHH--------HTTCTTTEEEEECBTTB
T ss_pred HHHHHhcCCCCC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHH--------hccccCceEEEEcCHHH
Confidence 334444433344 999999999999999887655689999999999999999976 23445579999999988
Q ss_pred cccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEe
Q 027388 154 VHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (224)
Q Consensus 154 ~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~ 206 (224)
++. +.+.||+|++..+++|+ .++..+++++.++|+|||.+++..
T Consensus 105 ~~~-----~~~~~D~v~~~~~l~~~----~~~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 105 IPI-----EDNYADLIVSRGSVFFW----EDVATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp CSS-----CTTCEEEEEEESCGGGC----SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCC-----CcccccEEEECchHhhc----cCHHHHHHHHHHhCCCCCEEEEEe
Confidence 775 56899999999999998 667899999999999999999874
No 17
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.83 E-value=1e-19 Score=147.74 Aligned_cols=156 Identities=40% Similarity=0.730 Sum_probs=113.1
Q ss_pred CceehhhhHHHHHHHHHHH-----hh--cCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccc
Q 027388 62 PIIHLKKLNNWIKSVLVQL-----YA--RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHH 134 (224)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~-----~~--~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~ 134 (224)
+++.++.+..|++..+... .. .++.+|||+|||+|.++..++.....+++++|+|+.+++.|+++........
T Consensus 5 ~i~~lr~~~~~~k~~l~~~~~~~l~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~ 84 (313)
T 3bgv_A 5 RIFYLRNFNNWMKSVLIGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRR 84 (313)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHHTC--CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSS
T ss_pred cchhhhhccHHHHHHHHHHHHHHhhhccCCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcc
Confidence 3445555666655544322 11 2678999999999999999886666799999999999999998865110000
Q ss_pred cccccCCCCeeEEecccccccccccc-CCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCChHHHH
Q 027388 135 QRRKKFSFPARLICGDCYEVHLDKVL-ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVII 213 (224)
Q Consensus 135 ~~~~~~~~~v~~~~~d~~~~~~~~~~-~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~~~~~ 213 (224)
......++.++++|+...+..... ...++||+|++..++||++.+.+++..+++++.++|+|||.+++++++.+.+.
T Consensus 85 --~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~l~ 162 (313)
T 3bgv_A 85 --DSEYIFSAEFITADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSFELI 162 (313)
T ss_dssp --CC-CCCEEEEEECCTTTSCSTTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHH
T ss_pred --cccccceEEEEEecccccchhhhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCChHHHH
Confidence 000123589999999876521111 02358999999999998766778889999999999999999999999998888
Q ss_pred HHhhhc
Q 027388 214 KKLREE 219 (224)
Q Consensus 214 ~~~~~~ 219 (224)
..+...
T Consensus 163 ~~~~~~ 168 (313)
T 3bgv_A 163 RRLEAS 168 (313)
T ss_dssp HHHTTS
T ss_pred HHHHhh
Confidence 776643
No 18
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.83 E-value=2.8e-19 Score=137.37 Aligned_cols=138 Identities=17% Similarity=0.103 Sum_probs=104.0
Q ss_pred hhhHHHHHHHHHHhhhccccchhhhccCCceehhhhHHHHHHHHHHH-hhcCCCeEEEecCCCchhHHHHHhhcCCeEEE
Q 027388 34 ESTKVFARKVADHYSRRTNQTLEEREASPIIHLKKLNNWIKSVLVQL-YARRGDVVLDLACGKGGDLIKWDKAKIGYYVG 112 (224)
Q Consensus 34 ~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~g 112 (224)
+....+|+..+..|+....... .. ....++..+ ...++.+|||||||+|.++..++.. ..+++|
T Consensus 9 ~~~~~~~~~~a~~y~~~~~~~~-----------~~---~~~~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~ 73 (218)
T 3ou2_A 9 ESQLSYYRARASEYDATFVPYM-----------DS---AAPAALERLRAGNIRGDVLELASGTGYWTRHLSGL-ADRVTA 73 (218)
T ss_dssp HHHHHHHHHHGGGHHHHHHHHH-----------TT---THHHHHHHHTTTTSCSEEEEESCTTSHHHHHHHHH-SSEEEE
T ss_pred HHHHHHHHHHHHHHHHhhhhHH-----------HH---HHHHHHHHHhcCCCCCeEEEECCCCCHHHHHHHhc-CCeEEE
Confidence 3455688888887765221111 11 122233333 2456789999999999999998866 559999
Q ss_pred EeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHH
Q 027388 113 IDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANV 192 (224)
Q Consensus 113 vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~ 192 (224)
+|+|+.+++.+++.. ..++.++++|+.+. . ..++||+|++..+++|+ +.+....+++++
T Consensus 74 ~D~s~~~~~~a~~~~-------------~~~~~~~~~d~~~~-~-----~~~~~D~v~~~~~l~~~--~~~~~~~~l~~~ 132 (218)
T 3ou2_A 74 LDGSAEMIAEAGRHG-------------LDNVEFRQQDLFDW-T-----PDRQWDAVFFAHWLAHV--PDDRFEAFWESV 132 (218)
T ss_dssp EESCHHHHHHHGGGC-------------CTTEEEEECCTTSC-C-----CSSCEEEEEEESCGGGS--CHHHHHHHHHHH
T ss_pred EeCCHHHHHHHHhcC-------------CCCeEEEecccccC-C-----CCCceeEEEEechhhcC--CHHHHHHHHHHH
Confidence 999999999998721 13589999999876 3 57899999999999998 555579999999
Q ss_pred HhhccCCeEEEEEeC
Q 027388 193 SALLRPGGTFIGTMP 207 (224)
Q Consensus 193 ~~~lk~gG~li~~~~ 207 (224)
.++|+|||.+++..+
T Consensus 133 ~~~L~pgG~l~~~~~ 147 (218)
T 3ou2_A 133 RSAVAPGGVVEFVDV 147 (218)
T ss_dssp HHHEEEEEEEEEEEE
T ss_pred HHHcCCCeEEEEEeC
Confidence 999999999998744
No 19
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.83 E-value=5.7e-20 Score=144.84 Aligned_cols=132 Identities=19% Similarity=0.226 Sum_probs=107.6
Q ss_pred HHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccc
Q 027388 73 IKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCY 152 (224)
Q Consensus 73 ~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~ 152 (224)
+..++..+...++.+|||||||+|.++..++.....+++|+|+|+.+++.+++++. ..++..++.++++|+.
T Consensus 25 ~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~--------~~~~~~~v~~~~~d~~ 96 (256)
T 1nkv_A 25 YATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAE--------ELGVSERVHFIHNDAA 96 (256)
T ss_dssp HHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHH--------HTTCTTTEEEEESCCT
T ss_pred HHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHH--------hcCCCcceEEEECChH
Confidence 44455555567889999999999999999886656689999999999999999876 2344457999999998
Q ss_pred ccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCC------------------------
Q 027388 153 EVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD------------------------ 208 (224)
Q Consensus 153 ~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~------------------------ 208 (224)
+.+. .++||+|++..+++|+ .++..+++++.++|||||.+++..+.
T Consensus 97 ~~~~------~~~fD~V~~~~~~~~~----~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (256)
T 1nkv_A 97 GYVA------NEKCDVAACVGATWIA----GGFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLT 166 (256)
T ss_dssp TCCC------SSCEEEEEEESCGGGT----SSSHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCC
T ss_pred hCCc------CCCCCEEEECCChHhc----CCHHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHhcccccccCC
Confidence 7653 5789999999999987 46789999999999999999987431
Q ss_pred hHHHHHHhhhcccc
Q 027388 209 ANVIIKKLREEHFC 222 (224)
Q Consensus 209 ~~~~~~~~~~~gf~ 222 (224)
...+...++++||.
T Consensus 167 ~~~~~~~l~~aGf~ 180 (256)
T 1nkv_A 167 LPGLVGAFDDLGYD 180 (256)
T ss_dssp HHHHHHHHHTTTBC
T ss_pred HHHHHHHHHHCCCe
Confidence 25677888888885
No 20
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.82 E-value=2e-19 Score=142.80 Aligned_cols=123 Identities=16% Similarity=0.249 Sum_probs=103.0
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccC
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (224)
..++.+|||||||+|.++..++.....+++|+|+|+.+++.+++++. ..++..++.++++|+.+++.
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~--------~~~~~~~v~~~~~d~~~~~~----- 110 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNAR--------QSGLQNRVTGIVGSMDDLPF----- 110 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHH--------HTTCTTTEEEEECCTTSCCC-----
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHH--------HcCCCcCcEEEEcChhhCCC-----
Confidence 46788999999999999999987756699999999999999999876 33455679999999988775
Q ss_pred CCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCC-----------------------hHHHHHHhhh
Q 027388 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD-----------------------ANVIIKKLRE 218 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~-----------------------~~~~~~~~~~ 218 (224)
+.++||+|++..+++++ ++..+++++.++|+|||++++..+. ...+...+++
T Consensus 111 ~~~~fD~i~~~~~~~~~-----~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 185 (267)
T 3kkz_A 111 RNEELDLIWSEGAIYNI-----GFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHK 185 (267)
T ss_dssp CTTCEEEEEESSCGGGT-----CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHH
T ss_pred CCCCEEEEEEcCCceec-----CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHH
Confidence 56899999999999986 3578999999999999999987542 2356677777
Q ss_pred cccc
Q 027388 219 EHFC 222 (224)
Q Consensus 219 ~gf~ 222 (224)
+||.
T Consensus 186 aGf~ 189 (267)
T 3kkz_A 186 AGYL 189 (267)
T ss_dssp TTEE
T ss_pred CCCE
Confidence 8875
No 21
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.82 E-value=3.6e-20 Score=146.32 Aligned_cols=128 Identities=22% Similarity=0.283 Sum_probs=88.3
Q ss_pred HHHHHHHHHHhhhccccchhhhccCCceehhhhHHHHHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCC
Q 027388 37 KVFARKVADHYSRRTNQTLEEREASPIIHLKKLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIA 116 (224)
Q Consensus 37 ~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s 116 (224)
++.|+..++.|+...-. .+..+.+++.. ....+.+|||||||+|.++..++.. +.+|+|+|+|
T Consensus 8 ~d~F~~~a~~Y~~~Rp~-----------yp~~l~~~l~~-----~~~~~~~vLDvGcGtG~~~~~l~~~-~~~v~gvD~s 70 (257)
T 4hg2_A 8 KDHFTPVADAYRAFRPR-----------YPRALFRWLGE-----VAPARGDALDCGCGSGQASLGLAEF-FERVHAVDPG 70 (257)
T ss_dssp ------------CCCCC-----------CCHHHHHHHHH-----HSSCSSEEEEESCTTTTTHHHHHTT-CSEEEEEESC
T ss_pred HHHHHHHHHHHHHHCCC-----------cHHHHHHHHHH-----hcCCCCCEEEEcCCCCHHHHHHHHh-CCEEEEEeCc
Confidence 35678888888742211 11222223222 1245679999999999999988754 5699999999
Q ss_pred hhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhc
Q 027388 117 EGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALL 196 (224)
Q Consensus 117 ~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~l 196 (224)
+.|++.|++. .++.+++++++++++ ++++||+|++..++||+ +...++.++.|+|
T Consensus 71 ~~ml~~a~~~---------------~~v~~~~~~~e~~~~-----~~~sfD~v~~~~~~h~~-----~~~~~~~e~~rvL 125 (257)
T 4hg2_A 71 EAQIRQALRH---------------PRVTYAVAPAEDTGL-----PPASVDVAIAAQAMHWF-----DLDRFWAELRRVA 125 (257)
T ss_dssp HHHHHTCCCC---------------TTEEEEECCTTCCCC-----CSSCEEEEEECSCCTTC-----CHHHHHHHHHHHE
T ss_pred HHhhhhhhhc---------------CCceeehhhhhhhcc-----cCCcccEEEEeeehhHh-----hHHHHHHHHHHHc
Confidence 9999877543 249999999998887 67899999999999886 2567999999999
Q ss_pred cCCeEEEEEe
Q 027388 197 RPGGTFIGTM 206 (224)
Q Consensus 197 k~gG~li~~~ 206 (224)
||||+|++..
T Consensus 126 kpgG~l~~~~ 135 (257)
T 4hg2_A 126 RPGAVFAAVT 135 (257)
T ss_dssp EEEEEEEEEE
T ss_pred CCCCEEEEEE
Confidence 9999998764
No 22
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.81 E-value=3.9e-19 Score=140.55 Aligned_cols=131 Identities=19% Similarity=0.219 Sum_probs=108.5
Q ss_pred HHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccc
Q 027388 74 KSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYE 153 (224)
Q Consensus 74 ~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~ 153 (224)
..++..+...++.+|||||||+|.++..++.....+++|+|+|+.+++.++++... . .++.++++|+.+
T Consensus 45 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~----------~-~~~~~~~~d~~~ 113 (266)
T 3ujc_A 45 KKILSDIELNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSG----------N-NKIIFEANDILT 113 (266)
T ss_dssp HHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCS----------C-TTEEEEECCTTT
T ss_pred HHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhc----------C-CCeEEEECcccc
Confidence 33444445567889999999999999998875466999999999999999998762 1 569999999988
Q ss_pred cccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeC------------------------Ch
Q 027388 154 VHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP------------------------DA 209 (224)
Q Consensus 154 ~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~------------------------~~ 209 (224)
++. +.++||+|++..+++|+ +..++..+++++.++|+|||.+++..+ ..
T Consensus 114 ~~~-----~~~~fD~v~~~~~l~~~--~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (266)
T 3ujc_A 114 KEF-----PENNFDLIYSRDAILAL--SLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITV 186 (266)
T ss_dssp CCC-----CTTCEEEEEEESCGGGS--CHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCH
T ss_pred CCC-----CCCcEEEEeHHHHHHhc--ChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCH
Confidence 765 57899999999999998 678999999999999999999998742 24
Q ss_pred HHHHHHhhhcccc
Q 027388 210 NVIIKKLREEHFC 222 (224)
Q Consensus 210 ~~~~~~~~~~gf~ 222 (224)
..+...++++||.
T Consensus 187 ~~~~~~l~~~Gf~ 199 (266)
T 3ujc_A 187 EEYADILTACNFK 199 (266)
T ss_dssp HHHHHHHHHTTCE
T ss_pred HHHHHHHHHcCCe
Confidence 5667777777774
No 23
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.81 E-value=2.5e-19 Score=144.27 Aligned_cols=119 Identities=19% Similarity=0.147 Sum_probs=98.7
Q ss_pred HHHHHHHHH----hhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEE
Q 027388 72 WIKSVLVQL----YARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLI 147 (224)
Q Consensus 72 ~~~~~~~~~----~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~ 147 (224)
....++..+ ...++.+|||||||+|.++..++.....+++|+|+|+.+++.++++.. ..++..++.++
T Consensus 66 ~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~--------~~~~~~~~~~~ 137 (297)
T 2o57_A 66 TDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNN--------QAGLADNITVK 137 (297)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHH--------HHTCTTTEEEE
T ss_pred HHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHH--------hcCCCcceEEE
Confidence 344444455 456788999999999999999886645699999999999999999875 23445679999
Q ss_pred eccccccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeC
Q 027388 148 CGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (224)
Q Consensus 148 ~~d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~ 207 (224)
++|+.+++. +.++||+|++..+++|+ .++..+++++.++|||||+|++..+
T Consensus 138 ~~d~~~~~~-----~~~~fD~v~~~~~l~~~----~~~~~~l~~~~~~LkpgG~l~~~~~ 188 (297)
T 2o57_A 138 YGSFLEIPC-----EDNSYDFIWSQDAFLHS----PDKLKVFQECARVLKPRGVMAITDP 188 (297)
T ss_dssp ECCTTSCSS-----CTTCEEEEEEESCGGGC----SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EcCcccCCC-----CCCCEeEEEecchhhhc----CCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 999988776 56899999999999998 4578999999999999999998743
No 24
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.81 E-value=6.5e-19 Score=137.64 Aligned_cols=144 Identities=22% Similarity=0.360 Sum_probs=105.7
Q ss_pred HHHHHHHHhhhccccchhhhccCCceehhhhHHHHHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChh
Q 027388 39 FARKVADHYSRRTNQTLEEREASPIIHLKKLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEG 118 (224)
Q Consensus 39 ~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~ 118 (224)
+|+.++..|+....... .......++...+... ..++.+|||+|||+|.++..++.. ..+++|+|+|+.
T Consensus 2 ~y~~~a~~yd~~~~~~~---------~~~~~~~~~~~~l~~~-~~~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~s~~ 70 (246)
T 1y8c_A 2 CYNKFAHIYDKLIRADV---------DYKKWSDFIIEKCVEN-NLVFDDYLDLACGTGNLTENLCPK-FKNTWAVDLSQE 70 (246)
T ss_dssp CHHHHHHHHHHHTTCSC---------CHHHHHHHHHHHHHTT-TCCTTEEEEETCTTSTTHHHHGGG-SSEEEEECSCHH
T ss_pred hHHHHHHHHHHHccccc---------cHHHHHHHHHHHHHHh-CCCCCeEEEeCCCCCHHHHHHHHC-CCcEEEEECCHH
Confidence 57788888875332100 1122223333332221 236789999999999999988765 458999999999
Q ss_pred HHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCCCCCeeEEEEcc-ccccccCCHHHHHHHHHHHHhhcc
Q 027388 119 SIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQF-AMHYSWSTEARARRALANVSALLR 197 (224)
Q Consensus 119 ~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~D~i~~~~-~l~~~~~~~~~~~~~l~~~~~~lk 197 (224)
+++.++++... ...++.++++|+.+++. + +.||+|++.. +++|+ ....++..+++++.++|+
T Consensus 71 ~~~~a~~~~~~----------~~~~~~~~~~d~~~~~~-----~-~~fD~v~~~~~~l~~~-~~~~~~~~~l~~~~~~L~ 133 (246)
T 1y8c_A 71 MLSEAENKFRS----------QGLKPRLACQDISNLNI-----N-RKFDLITCCLDSTNYI-IDSDDLKKYFKAVSNHLK 133 (246)
T ss_dssp HHHHHHHHHHH----------TTCCCEEECCCGGGCCC-----S-CCEEEEEECTTGGGGC-CSHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHhh----------cCCCeEEEecccccCCc-----c-CCceEEEEcCcccccc-CCHHHHHHHHHHHHHhcC
Confidence 99999998762 12258999999987764 3 7899999998 99987 344688999999999999
Q ss_pred CCeEEEEEeCChH
Q 027388 198 PGGTFIGTMPDAN 210 (224)
Q Consensus 198 ~gG~li~~~~~~~ 210 (224)
|||.+++.+++..
T Consensus 134 pgG~l~~~~~~~~ 146 (246)
T 1y8c_A 134 EGGVFIFDINSYY 146 (246)
T ss_dssp EEEEEEEEEECHH
T ss_pred CCcEEEEEecCHH
Confidence 9999999765543
No 25
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.81 E-value=4.7e-19 Score=139.63 Aligned_cols=124 Identities=18% Similarity=0.231 Sum_probs=103.5
Q ss_pred hhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccccc
Q 027388 81 YARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (224)
...++.+|||||||+|.++..++.....+++|+|+|+.+++.+++++. ..++..++.++++|+.+++.
T Consensus 43 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~--------~~~~~~~~~~~~~d~~~~~~---- 110 (257)
T 3f4k_A 43 ELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAV--------KANCADRVKGITGSMDNLPF---- 110 (257)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHH--------HTTCTTTEEEEECCTTSCSS----
T ss_pred cCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHH--------HcCCCCceEEEECChhhCCC----
Confidence 345678999999999999999987766699999999999999999876 33455569999999988775
Q ss_pred CCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCC-----------------------hHHHHHHhh
Q 027388 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD-----------------------ANVIIKKLR 217 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~-----------------------~~~~~~~~~ 217 (224)
+.++||+|++..+++|+ ++..+++++.++|+|||++++..++ ...+...++
T Consensus 111 -~~~~fD~v~~~~~l~~~-----~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 184 (257)
T 3f4k_A 111 -QNEELDLIWSEGAIYNI-----GFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKME 184 (257)
T ss_dssp -CTTCEEEEEEESCSCCC-----CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHH
T ss_pred -CCCCEEEEEecChHhhc-----CHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHH
Confidence 56899999999999986 3678999999999999999997532 245677778
Q ss_pred hcccc
Q 027388 218 EEHFC 222 (224)
Q Consensus 218 ~~gf~ 222 (224)
++||.
T Consensus 185 ~aGf~ 189 (257)
T 3f4k_A 185 RAGYT 189 (257)
T ss_dssp HTTEE
T ss_pred HCCCe
Confidence 88874
No 26
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.81 E-value=3.6e-19 Score=139.06 Aligned_cols=107 Identities=24% Similarity=0.360 Sum_probs=91.8
Q ss_pred hhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccccc
Q 027388 81 YARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (224)
...++.+|||||||+|.++..++.....+++|+|+|+.+++.++++.. ..++.++++|+.+++.
T Consensus 40 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~------------~~~~~~~~~d~~~~~~---- 103 (243)
T 3bkw_A 40 PEVGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGP------------DTGITYERADLDKLHL---- 103 (243)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSC------------SSSEEEEECCGGGCCC----
T ss_pred cccCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhcc------------cCCceEEEcChhhccC----
Confidence 345788999999999999998886654489999999999999998876 2358999999987765
Q ss_pred CCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCC
Q 027388 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~ 208 (224)
+.++||+|++..+++|+ +++..+++++.++|+|||.+++.+++
T Consensus 104 -~~~~fD~v~~~~~l~~~----~~~~~~l~~~~~~L~pgG~l~~~~~~ 146 (243)
T 3bkw_A 104 -PQDSFDLAYSSLALHYV----EDVARLFRTVHQALSPGGHFVFSTEH 146 (243)
T ss_dssp -CTTCEEEEEEESCGGGC----SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -CCCCceEEEEecccccc----chHHHHHHHHHHhcCcCcEEEEEeCC
Confidence 46899999999999998 56789999999999999999997643
No 27
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.81 E-value=4.1e-19 Score=137.09 Aligned_cols=143 Identities=18% Similarity=0.207 Sum_probs=103.1
Q ss_pred hhhHHHHHHHHHHhhhccccchhhhccCCceehhhhHHHHHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEE
Q 027388 34 ESTKVFARKVADHYSRRTNQTLEEREASPIIHLKKLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGI 113 (224)
Q Consensus 34 ~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gv 113 (224)
+....+|+..+..|+........ ..........++..+...++.+|||||||+|.++..++.. ..+++|+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~v 80 (227)
T 3e8s_A 11 DALLDSWHQNAQAWIDAVRHGAI---------ESRRQVTDQAILLAILGRQPERVLDLGCGEGWLLRALADR-GIEAVGV 80 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCC---------HHHHHTHHHHHHHHHHHTCCSEEEEETCTTCHHHHHHHTT-TCEEEEE
T ss_pred HHHHHHHHhhHHHHHHHhccccc---------ccccccccHHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHC-CCEEEEE
Confidence 45678899888888753221110 0111112233444445567799999999999999988765 5589999
Q ss_pred eCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHH
Q 027388 114 DIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVS 193 (224)
Q Consensus 114 D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~ 193 (224)
|+|+.+++.++++.. +.+..+|+.++..... ....+||+|++..+++ . .++..+++++.
T Consensus 81 D~s~~~~~~a~~~~~---------------~~~~~~~~~~~~~~~~-~~~~~fD~v~~~~~l~-~----~~~~~~l~~~~ 139 (227)
T 3e8s_A 81 DGDRTLVDAARAAGA---------------GEVHLASYAQLAEAKV-PVGKDYDLICANFALL-H----QDIIELLSAMR 139 (227)
T ss_dssp ESCHHHHHHHHHTCS---------------SCEEECCHHHHHTTCS-CCCCCEEEEEEESCCC-S----SCCHHHHHHHH
T ss_pred cCCHHHHHHHHHhcc---------------cccchhhHHhhccccc-ccCCCccEEEECchhh-h----hhHHHHHHHHH
Confidence 999999999998732 6788888776621111 1345699999999998 4 56779999999
Q ss_pred hhccCCeEEEEEeC
Q 027388 194 ALLRPGGTFIGTMP 207 (224)
Q Consensus 194 ~~lk~gG~li~~~~ 207 (224)
++|+|||+|++.++
T Consensus 140 ~~L~pgG~l~~~~~ 153 (227)
T 3e8s_A 140 TLLVPGGALVIQTL 153 (227)
T ss_dssp HTEEEEEEEEEEEC
T ss_pred HHhCCCeEEEEEec
Confidence 99999999999865
No 28
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.81 E-value=4e-19 Score=140.48 Aligned_cols=111 Identities=20% Similarity=0.313 Sum_probs=92.3
Q ss_pred HHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccc
Q 027388 76 VLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH 155 (224)
Q Consensus 76 ~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 155 (224)
++..+...++.+|||||||+|.++..++... .+++|+|+|+.+++.|++++.. .++ .++.++++|+.+++
T Consensus 29 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~l~~a~~~~~~--------~~~-~~v~~~~~d~~~l~ 98 (260)
T 1vl5_A 29 LMQIAALKGNEEVLDVATGGGHVANAFAPFV-KKVVAFDLTEDILKVARAFIEG--------NGH-QQVEYVQGDAEQMP 98 (260)
T ss_dssp HHHHHTCCSCCEEEEETCTTCHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHHH--------TTC-CSEEEEECCC-CCC
T ss_pred HHHHhCCCCCCEEEEEeCCCCHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHh--------cCC-CceEEEEecHHhCC
Confidence 3444455678999999999999999887554 5999999999999999988752 122 25899999998877
Q ss_pred cccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 156 LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 156 ~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
+ ++++||+|++..+++|+ +++..+++++.++|+|||+|++.
T Consensus 99 ~-----~~~~fD~V~~~~~l~~~----~d~~~~l~~~~r~LkpgG~l~~~ 139 (260)
T 1vl5_A 99 F-----TDERFHIVTCRIAAHHF----PNPASFVSEAYRVLKKGGQLLLV 139 (260)
T ss_dssp S-----CTTCEEEEEEESCGGGC----SCHHHHHHHHHHHEEEEEEEEEE
T ss_pred C-----CCCCEEEEEEhhhhHhc----CCHHHHHHHHHHHcCCCCEEEEE
Confidence 6 56899999999999998 56789999999999999999986
No 29
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.81 E-value=4.6e-19 Score=136.44 Aligned_cols=129 Identities=18% Similarity=0.160 Sum_probs=107.3
Q ss_pred HHHHHhhcCCCeEEEecCCCchhHHHHHhhc--CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccc
Q 027388 76 VLVQLYARRGDVVLDLACGKGGDLIKWDKAK--IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYE 153 (224)
Q Consensus 76 ~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~--~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~ 153 (224)
++..+...++.+|||+|||+|.++..++... ..+++++|+|+.+++.+++++.. .++. ++.++++|+.+
T Consensus 29 ~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~--------~~~~-~~~~~~~d~~~ 99 (219)
T 3dh0_A 29 VLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNK--------LGLK-NVEVLKSEENK 99 (219)
T ss_dssp HHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHH--------HTCT-TEEEEECBTTB
T ss_pred HHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHH--------cCCC-cEEEEeccccc
Confidence 4444556778899999999999999988654 45899999999999999998752 2222 59999999988
Q ss_pred cccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeC---------------ChHHHHHHhhh
Q 027388 154 VHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP---------------DANVIIKKLRE 218 (224)
Q Consensus 154 ~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~---------------~~~~~~~~~~~ 218 (224)
++. ..+.||+|++..+++|+ .++..+++++.++|+|||.+++... ....+...+++
T Consensus 100 ~~~-----~~~~fD~v~~~~~l~~~----~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 170 (219)
T 3dh0_A 100 IPL-----PDNTVDFIFMAFTFHEL----SEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILED 170 (219)
T ss_dssp CSS-----CSSCEEEEEEESCGGGC----SSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHH
T ss_pred CCC-----CCCCeeEEEeehhhhhc----CCHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHH
Confidence 765 56889999999999998 5678999999999999999998743 24788899999
Q ss_pred cccc
Q 027388 219 EHFC 222 (224)
Q Consensus 219 ~gf~ 222 (224)
+||.
T Consensus 171 ~Gf~ 174 (219)
T 3dh0_A 171 AGIR 174 (219)
T ss_dssp TTCE
T ss_pred CCCE
Confidence 9985
No 30
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.80 E-value=2.5e-18 Score=132.35 Aligned_cols=115 Identities=19% Similarity=0.193 Sum_probs=92.8
Q ss_pred HHHHHhhcCCCeEEEecCCCchhHHHHHhhcC-CeEEEEeCChhHHHHHHHhccCCcccccccccCCC----CeeEEecc
Q 027388 76 VLVQLYARRGDVVLDLACGKGGDLIKWDKAKI-GYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSF----PARLICGD 150 (224)
Q Consensus 76 ~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~-~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~----~v~~~~~d 150 (224)
+...+...++.+|||||||+|.++..++.... .+++|+|+|+.+++.+++++.. .++.. ++.++++|
T Consensus 21 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~--------~~~~~~~~~~v~~~~~d 92 (217)
T 3jwh_A 21 VVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDR--------LRLPRNQWERLQLIQGA 92 (217)
T ss_dssp HHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTT--------CCCCHHHHTTEEEEECC
T ss_pred HHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHH--------hcCCcccCcceEEEeCC
Confidence 33344456788999999999999999886543 6999999999999999998762 22222 69999999
Q ss_pred ccccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 151 CYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 151 ~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
+...+. ..++||+|++..+++|+ +.++...+++++.++|+|||++++.
T Consensus 93 ~~~~~~-----~~~~fD~v~~~~~l~~~--~~~~~~~~l~~~~~~LkpgG~li~~ 140 (217)
T 3jwh_A 93 LTYQDK-----RFHGYDAATVIEVIEHL--DLSRLGAFERVLFEFAQPKIVIVTT 140 (217)
T ss_dssp TTSCCG-----GGCSCSEEEEESCGGGC--CHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred cccccc-----cCCCcCEEeeHHHHHcC--CHHHHHHHHHHHHHHcCCCEEEEEc
Confidence 865554 35799999999999998 6667799999999999999966654
No 31
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.80 E-value=6e-19 Score=139.91 Aligned_cols=152 Identities=16% Similarity=0.177 Sum_probs=106.9
Q ss_pred hHHHHHHHHHHH---hhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccc-----------
Q 027388 69 LNNWIKSVLVQL---YARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHH----------- 134 (224)
Q Consensus 69 ~~~~~~~~~~~~---~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~----------- 134 (224)
...|....+..+ ...++.+|||||||+|.+...++.....+|+|+|+|+.|++.|++++.......
T Consensus 37 ~~~~~~~~~~~~~~~~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~ 116 (263)
T 2a14_A 37 MLKFNLECLHKTFGPGGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACE 116 (263)
T ss_dssp HHHHHHHHHHHHHSTTSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHh
Confidence 445554444433 345678999999999988776655555689999999999999998765321000
Q ss_pred ---------cccccCCCCee-EEecccccc-ccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEE
Q 027388 135 ---------QRRKKFSFPAR-LICGDCYEV-HLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFI 203 (224)
Q Consensus 135 ---------~~~~~~~~~v~-~~~~d~~~~-~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li 203 (224)
+.......++. ++++|+.+. ++... ..++||+|+++++++|+....++...+++++.++|||||.|+
T Consensus 117 ~~~~~~~~~~~~~~~~~~i~~~~~~D~~~~~~~~~~--~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li 194 (263)
T 2a14_A 117 LEGNSGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPA--VLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLV 194 (263)
T ss_dssp HTTCGGGHHHHHHHHHHHEEEEEECCTTSSSTTTTC--CCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEE
T ss_pred cCCCCcchhhHHHHHHhhhheEEeccccCCCCCCcc--ccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEE
Confidence 00000011243 889998763 22100 246899999999999875556788999999999999999999
Q ss_pred EEeC------------------ChHHHHHHhhhcccc
Q 027388 204 GTMP------------------DANVIIKKLREEHFC 222 (224)
Q Consensus 204 ~~~~------------------~~~~~~~~~~~~gf~ 222 (224)
+... ....+...+.++||.
T Consensus 195 ~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~aGF~ 231 (263)
T 2a14_A 195 TTVTLRLPSYMVGKREFSCVALEKGEVEQAVLDAGFD 231 (263)
T ss_dssp EEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTEE
T ss_pred EEEeecCccceeCCeEeeccccCHHHHHHHHHHCCCE
Confidence 8741 345788899999985
No 32
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.80 E-value=1.2e-18 Score=137.70 Aligned_cols=137 Identities=16% Similarity=0.179 Sum_probs=104.5
Q ss_pred HHHHHHHHHhhhccccchhhhccCCceehhhhHHHHHHHHH-HHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCC
Q 027388 38 VFARKVADHYSRRTNQTLEEREASPIIHLKKLNNWIKSVLV-QLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIA 116 (224)
Q Consensus 38 ~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s 116 (224)
..|+..+..|+...... .......+..+.. .....++.+|||+|||+|.++..++.. ..+++|+|+|
T Consensus 3 ~~~~~~a~~y~~~~~~~-----------~~~~~~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s 70 (263)
T 2yqz_A 3 SALLRAAYAYDRLRAHP-----------PEVAGQIATAMASAVHPKGEEPVFLELGVGTGRIALPLIAR-GYRYIALDAD 70 (263)
T ss_dssp HHHHHHHHHHHHHHCCC-----------HHHHHHHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTT-TCEEEEEESC
T ss_pred CchHHHHHHHhhhcccC-----------hHHHHHHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHC-CCEEEEEECC
Confidence 46888888887533211 1122222222222 113467889999999999999998765 5689999999
Q ss_pred hhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhc
Q 027388 117 EGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALL 196 (224)
Q Consensus 117 ~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~l 196 (224)
+.+++.+++++. ....++.+.++|+.+++. +.++||+|++..+++|+ ++...+++++.++|
T Consensus 71 ~~~~~~a~~~~~----------~~~~~~~~~~~d~~~~~~-----~~~~fD~v~~~~~l~~~----~~~~~~l~~~~~~L 131 (263)
T 2yqz_A 71 AAMLEVFRQKIA----------GVDRKVQVVQADARAIPL-----PDESVHGVIVVHLWHLV----PDWPKVLAEAIRVL 131 (263)
T ss_dssp HHHHHHHHHHTT----------TSCTTEEEEESCTTSCCS-----CTTCEEEEEEESCGGGC----TTHHHHHHHHHHHE
T ss_pred HHHHHHHHHHhh----------ccCCceEEEEcccccCCC-----CCCCeeEEEECCchhhc----CCHHHHHHHHHHHC
Confidence 999999999863 123468999999987765 56799999999999998 56889999999999
Q ss_pred cCCeEEEEE
Q 027388 197 RPGGTFIGT 205 (224)
Q Consensus 197 k~gG~li~~ 205 (224)
+|||.+++.
T Consensus 132 ~pgG~l~~~ 140 (263)
T 2yqz_A 132 KPGGALLEG 140 (263)
T ss_dssp EEEEEEEEE
T ss_pred CCCcEEEEE
Confidence 999999886
No 33
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.79 E-value=1.8e-18 Score=136.24 Aligned_cols=116 Identities=18% Similarity=0.149 Sum_probs=88.8
Q ss_pred cCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccc--cccc------cCCCCeeEEecccccc
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHH--QRRK------KFSFPARLICGDCYEV 154 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~--~~~~------~~~~~v~~~~~d~~~~ 154 (224)
.++.+|||+|||+|..+..++..+ .+|+|||+|+.|++.|+++........ .... ....++.++++|+.++
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~G-~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADRG-HTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHTT-CEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCCCeEEEeCCCCcHHHHHHHHCC-CeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 477899999999999999988664 489999999999999987653100000 0000 0134699999999887
Q ss_pred ccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 155 HLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 155 ~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
+.. ..++||+|++..+++++ +.++...+++++.++|||||+|++.
T Consensus 146 ~~~----~~~~FD~V~~~~~l~~l--~~~~~~~~l~~~~~~LkpGG~l~l~ 190 (252)
T 2gb4_A 146 PRA----NIGKFDRIWDRGALVAI--NPGDHDRYADIILSLLRKEFQYLVA 190 (252)
T ss_dssp GGG----CCCCEEEEEESSSTTTS--CGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred Ccc----cCCCEEEEEEhhhhhhC--CHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 752 13799999999999988 5567889999999999999998643
No 34
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.79 E-value=1.2e-18 Score=137.84 Aligned_cols=101 Identities=25% Similarity=0.417 Sum_probs=87.3
Q ss_pred cCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCC
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (224)
.++.+|||||||+|.++..++.. ..+++|+|+|+.+++.|+++.. ++.++++|+.+++.
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~--------------~~~~~~~d~~~~~~------ 107 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADS-FGTVEGLELSADMLAIARRRNP--------------DAVLHHGDMRDFSL------ 107 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTT-SSEEEEEESCHHHHHHHHHHCT--------------TSEEEECCTTTCCC------
T ss_pred CCCCcEEEeCCcCCHHHHHHHHc-CCeEEEEECCHHHHHHHHhhCC--------------CCEEEECChHHCCc------
Confidence 46689999999999999988755 4589999999999999998864 48999999988764
Q ss_pred CCCeeEEEEcc-ccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 163 DAPFDICSCQF-AMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 163 ~~~~D~i~~~~-~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
.++||+|++.. +++|+ ....+...+++++.++|+|||+|++.
T Consensus 108 ~~~fD~v~~~~~~l~~~-~~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 108 GRRFSAVTCMFSSIGHL-AGQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp SCCEEEEEECTTGGGGS-CHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred cCCcCEEEEcCchhhhc-CCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 57999999998 99987 23357889999999999999999985
No 35
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.79 E-value=4.9e-19 Score=147.67 Aligned_cols=129 Identities=22% Similarity=0.291 Sum_probs=102.3
Q ss_pred hcCCCeEEEecCCCchhHHHHHhh--cCCeEEEEeCChhHHHHHHHhccCCccccccc-c-cCCCCeeEEecccccc---
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRR-K-KFSFPARLICGDCYEV--- 154 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~--~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~-~-~~~~~v~~~~~d~~~~--- 154 (224)
..++.+|||||||+|.++..++.. ...+|+|+|+|+.+++.|++++...... . . ....++.++++|+.++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~---~~g~~~~~~v~~~~~d~~~l~~~ 157 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEK---FFGSPSRSNVRFLKGFIENLATA 157 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHH---HHSSTTCCCEEEEESCTTCGGGC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhh---cccccCCCceEEEEccHHHhhhc
Confidence 457889999999999999988765 3559999999999999999886411000 0 0 0124699999999876
Q ss_pred ---ccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeC------------------------
Q 027388 155 ---HLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP------------------------ 207 (224)
Q Consensus 155 ---~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~------------------------ 207 (224)
++ +.++||+|+++.+++++ +++..+++++.++|||||+|++..+
T Consensus 158 ~~~~~-----~~~~fD~V~~~~~l~~~----~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (383)
T 4fsd_A 158 EPEGV-----PDSSVDIVISNCVCNLS----TNKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGA 228 (383)
T ss_dssp BSCCC-----CTTCEEEEEEESCGGGC----SCHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTC
T ss_pred ccCCC-----CCCCEEEEEEccchhcC----CCHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccC
Confidence 43 56899999999999998 5678999999999999999998742
Q ss_pred -ChHHHHHHhhhcccc
Q 027388 208 -DANVIIKKLREEHFC 222 (224)
Q Consensus 208 -~~~~~~~~~~~~gf~ 222 (224)
....+.+.++++||.
T Consensus 229 ~~~~~~~~ll~~aGF~ 244 (383)
T 4fsd_A 229 LYLEDFRRLVAEAGFR 244 (383)
T ss_dssp CBHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHCCCc
Confidence 226788888999985
No 36
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.79 E-value=3.9e-18 Score=136.97 Aligned_cols=129 Identities=19% Similarity=0.238 Sum_probs=98.8
Q ss_pred HHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccc
Q 027388 79 QLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK 158 (224)
Q Consensus 79 ~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 158 (224)
.+...++.+|||||||+|.++..++..+. +++|+|+|+.+++.|+++...... .....++.+..+|+.+++..
T Consensus 52 ~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~-----~~~~~~~~~~~~d~~~~~~~- 124 (293)
T 3thr_A 52 LLRQHGCHRVLDVACGTGVDSIMLVEEGF-SVTSVDASDKMLKYALKERWNRRK-----EPAFDKWVIEEANWLTLDKD- 124 (293)
T ss_dssp HHHHTTCCEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTT-----SHHHHTCEEEECCGGGHHHH-
T ss_pred HhcccCCCEEEEecCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHhhhhccc-----ccccceeeEeecChhhCccc-
Confidence 33445788999999999999999886644 999999999999999887531100 00113477889998876510
Q ss_pred ccCCCCCeeEEEEc-cccccccC---CHHHHHHHHHHHHhhccCCeEEEEEeCChHHHHHH
Q 027388 159 VLADDAPFDICSCQ-FAMHYSWS---TEARARRALANVSALLRPGGTFIGTMPDANVIIKK 215 (224)
Q Consensus 159 ~~~~~~~~D~i~~~-~~l~~~~~---~~~~~~~~l~~~~~~lk~gG~li~~~~~~~~~~~~ 215 (224)
+ ...++||+|++. .+++|+.+ ...++..+++++.++|+|||+|++.+++.+.+.+.
T Consensus 125 ~-~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~ 184 (293)
T 3thr_A 125 V-PAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNYDYILST 184 (293)
T ss_dssp S-CCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHH
T ss_pred c-ccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCCHHHHhhc
Confidence 0 146899999998 89999832 13568999999999999999999999998877653
No 37
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.79 E-value=2.2e-18 Score=139.16 Aligned_cols=119 Identities=16% Similarity=0.117 Sum_probs=97.7
Q ss_pred HHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccc
Q 027388 73 IKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCY 152 (224)
Q Consensus 73 ~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~ 152 (224)
+..++..+...++.+|||||||+|.++..++.....+++|+|+|+.+++.|++++. ..++..++.++++|+.
T Consensus 61 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~--------~~~~~~~v~~~~~d~~ 132 (302)
T 3hem_A 61 RKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFD--------EVDSPRRKEVRIQGWE 132 (302)
T ss_dssp HHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHH--------HSCCSSCEEEEECCGG
T ss_pred HHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHH--------hcCCCCceEEEECCHH
Confidence 44444555567788999999999999999987644799999999999999999976 2345557999999987
Q ss_pred ccccccccCCCCCeeEEEEccccccccC-----CHHHHHHHHHHHHhhccCCeEEEEEeC
Q 027388 153 EVHLDKVLADDAPFDICSCQFAMHYSWS-----TEARARRALANVSALLRPGGTFIGTMP 207 (224)
Q Consensus 153 ~~~~~~~~~~~~~~D~i~~~~~l~~~~~-----~~~~~~~~l~~~~~~lk~gG~li~~~~ 207 (224)
++ .++||+|++..+++|+.+ +..+...+++++.++|+|||.+++..+
T Consensus 133 ~~--------~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 184 (302)
T 3hem_A 133 EF--------DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI 184 (302)
T ss_dssp GC--------CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred Hc--------CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 65 368999999999999844 225678999999999999999998643
No 38
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.79 E-value=2.8e-19 Score=136.96 Aligned_cols=103 Identities=20% Similarity=0.288 Sum_probs=88.8
Q ss_pred CCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCCC
Q 027388 84 RGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADD 163 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 163 (224)
++.+|||+|||+|.++..+ ...+++++|+|+.+++.++++.. ++.++++|+.+++. +.
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~~--------------~~~~~~~d~~~~~~-----~~ 93 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRAP--------------EATWVRAWGEALPF-----PG 93 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHCT--------------TSEEECCCTTSCCS-----CS
T ss_pred CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhCC--------------CcEEEEcccccCCC-----CC
Confidence 7889999999999988766 33389999999999999998853 47899999987765 56
Q ss_pred CCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCChHHH
Q 027388 164 APFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVI 212 (224)
Q Consensus 164 ~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~~~~ 212 (224)
++||+|++..+++|+ +++..+++++.++|+|||.+++.+++....
T Consensus 94 ~~fD~v~~~~~l~~~----~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~ 138 (211)
T 2gs9_A 94 ESFDVVLLFTTLEFV----EDVERVLLEARRVLRPGGALVVGVLEALSP 138 (211)
T ss_dssp SCEEEEEEESCTTTC----SCHHHHHHHHHHHEEEEEEEEEEEECTTSH
T ss_pred CcEEEEEEcChhhhc----CCHHHHHHHHHHHcCCCCEEEEEecCCcCc
Confidence 799999999999998 567899999999999999999998876533
No 39
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.79 E-value=3e-18 Score=132.01 Aligned_cols=112 Identities=19% Similarity=0.206 Sum_probs=91.3
Q ss_pred HHhhcCCCeEEEecCCCchhHHHHHhhcC-CeEEEEeCChhHHHHHHHhccCCcccccccccCCC----CeeEEeccccc
Q 027388 79 QLYARRGDVVLDLACGKGGDLIKWDKAKI-GYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSF----PARLICGDCYE 153 (224)
Q Consensus 79 ~~~~~~~~~iLDiGcG~G~~~~~l~~~~~-~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~----~v~~~~~d~~~ 153 (224)
.+...++.+|||||||+|.++..++.... .+++|+|+|+.+++.+++++.. ..+.. ++.++++|+..
T Consensus 24 ~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~--------~~~~~~~~~~v~~~~~d~~~ 95 (219)
T 3jwg_A 24 VLKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKI--------DRLPEMQRKRISLFQSSLVY 95 (219)
T ss_dssp HHHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTG--------GGSCHHHHTTEEEEECCSSS
T ss_pred HHhhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHh--------hccccccCcceEEEeCcccc
Confidence 33446788999999999999999876543 6899999999999999998762 22222 68999999866
Q ss_pred cccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 154 VHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 154 ~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
.+. ..++||+|++..+++|+ +.++...+++++.++|+|||+++..
T Consensus 96 ~~~-----~~~~fD~V~~~~~l~~~--~~~~~~~~l~~~~~~LkpgG~~i~~ 140 (219)
T 3jwg_A 96 RDK-----RFSGYDAATVIEVIEHL--DENRLQAFEKVLFEFTRPQTVIVST 140 (219)
T ss_dssp CCG-----GGTTCSEEEEESCGGGC--CHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred ccc-----ccCCCCEEEEHHHHHhC--CHHHHHHHHHHHHHhhCCCEEEEEc
Confidence 554 45799999999999998 6667789999999999999965543
No 40
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.79 E-value=1.2e-18 Score=136.14 Aligned_cols=103 Identities=20% Similarity=0.232 Sum_probs=87.3
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccc--ccccc
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV--HLDKV 159 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~--~~~~~ 159 (224)
..++.+|||||||+|.++..++.. ..+++|+|+|+.+++.++++ +.++++|+.+. +.
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~-----------------~~~~~~d~~~~~~~~--- 97 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEE-GIESIGVDINEDMIKFCEGK-----------------FNVVKSDAIEYLKSL--- 97 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHH-TCCEEEECSCHHHHHHHHTT-----------------SEEECSCHHHHHHTS---
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhC-CCcEEEEECCHHHHHHHHhh-----------------cceeeccHHHHhhhc---
Confidence 356789999999999999888765 45899999999999999865 56778887764 33
Q ss_pred cCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCCh
Q 027388 160 LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDA 209 (224)
Q Consensus 160 ~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~ 209 (224)
+.++||+|++..+++|+ +.++...+++++.++|||||++++.+++.
T Consensus 98 --~~~~fD~i~~~~~l~~~--~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 143 (240)
T 3dli_A 98 --PDKYLDGVMISHFVEHL--DPERLFELLSLCYSKMKYSSYIVIESPNP 143 (240)
T ss_dssp --CTTCBSEEEEESCGGGS--CGGGHHHHHHHHHHHBCTTCCEEEEEECT
T ss_pred --CCCCeeEEEECCchhhC--CcHHHHHHHHHHHHHcCCCcEEEEEeCCc
Confidence 46899999999999998 55577999999999999999999987654
No 41
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.78 E-value=2.9e-18 Score=137.41 Aligned_cols=116 Identities=16% Similarity=0.159 Sum_probs=94.8
Q ss_pred HHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccc
Q 027388 74 KSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYE 153 (224)
Q Consensus 74 ~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~ 153 (224)
..++..+...++.+|||||||+|.++..++.....+++|+|+|+.+++.+++++.. .++..++.++++|+.+
T Consensus 54 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~--------~~~~~~~~~~~~d~~~ 125 (287)
T 1kpg_A 54 DLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVAN--------SENLRSKRVLLAGWEQ 125 (287)
T ss_dssp HHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHT--------CCCCSCEEEEESCGGG
T ss_pred HHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHh--------cCCCCCeEEEECChhh
Confidence 33444445567889999999999999998855456999999999999999998762 3444578999999864
Q ss_pred cccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeC
Q 027388 154 VHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (224)
Q Consensus 154 ~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~ 207 (224)
++ ++||+|++..+++|+ +..++..+++++.++|||||.+++..+
T Consensus 126 ~~--------~~fD~v~~~~~l~~~--~~~~~~~~l~~~~~~LkpgG~l~~~~~ 169 (287)
T 1kpg_A 126 FD--------EPVDRIVSIGAFEHF--GHERYDAFFSLAHRLLPADGVMLLHTI 169 (287)
T ss_dssp CC--------CCCSEEEEESCGGGT--CTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CC--------CCeeEEEEeCchhhc--ChHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 32 689999999999998 446788999999999999999998654
No 42
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.78 E-value=2e-18 Score=140.15 Aligned_cols=107 Identities=15% Similarity=0.256 Sum_probs=93.0
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccC
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (224)
..++.+|||||||+|.++..++.....+++|+|+|+.+++.|++++. ..++..++.++++|+.+++.
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~--------~~~~~~~v~~~~~d~~~~~~----- 181 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRAR--------ELRIDDHVRSRVCNMLDTPF----- 181 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHH--------HTTCTTTEEEEECCTTSCCC-----
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH--------HcCCCCceEEEECChhcCCC-----
Confidence 45678999999999999999886645689999999999999999876 33455679999999988775
Q ss_pred CCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEe
Q 027388 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~ 206 (224)
+.++||+|++..+++|+ . +..+++++.++|||||++++.+
T Consensus 182 ~~~~fD~V~~~~~l~~~--~---~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 182 DKGAVTASWNNESTMYV--D---LHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp CTTCEEEEEEESCGGGS--C---HHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCEeEEEECCchhhC--C---HHHHHHHHHHHcCCCcEEEEEE
Confidence 56899999999999997 2 8899999999999999999875
No 43
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.78 E-value=2e-18 Score=138.29 Aligned_cols=108 Identities=20% Similarity=0.336 Sum_probs=92.7
Q ss_pred hhcCCCeEEEecCCCchhHHHHHhhc--CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccc
Q 027388 81 YARRGDVVLDLACGKGGDLIKWDKAK--IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK 158 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~G~~~~~l~~~~--~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 158 (224)
...++.+|||||||+|.++..++... ..+++|+|+|+.+++.+++++.. .+.++.++++|+.+.+.
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~----------~~~~v~~~~~d~~~~~~-- 86 (284)
T 3gu3_A 19 KITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRL----------LPYDSEFLEGDATEIEL-- 86 (284)
T ss_dssp CCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHS----------SSSEEEEEESCTTTCCC--
T ss_pred ccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHh----------cCCceEEEEcchhhcCc--
Confidence 34678899999999999999987652 36899999999999999998762 23369999999987664
Q ss_pred ccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCC
Q 027388 159 VLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (224)
Q Consensus 159 ~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~ 208 (224)
.++||+|++..+++++ ++...+++++.++|+|||++++..++
T Consensus 87 ----~~~fD~v~~~~~l~~~----~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 87 ----NDKYDIAICHAFLLHM----TTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp ----SSCEEEEEEESCGGGC----SSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ----CCCeeEEEECChhhcC----CCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 4689999999999998 56789999999999999999998877
No 44
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.78 E-value=1.7e-18 Score=134.83 Aligned_cols=122 Identities=19% Similarity=0.221 Sum_probs=101.5
Q ss_pred CCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCCC
Q 027388 84 RGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADD 163 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 163 (224)
++.+|||||||+|.++..++. ...+++|+|+|+.+++.|++++.. .+...++.++++|+.+.+. .
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~~~--------~~~~~~v~~~~~d~~~~~~------~ 130 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMAS-PERFVVGLDISESALAKANETYGS--------SPKAEYFSFVKEDVFTWRP------T 130 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCB-TTEEEEEECSCHHHHHHHHHHHTT--------SGGGGGEEEECCCTTTCCC------S
T ss_pred CCCCEEEeCCCCCHHHHHHHh-CCCeEEEEECCHHHHHHHHHHhhc--------cCCCcceEEEECchhcCCC------C
Confidence 446999999999999998864 455899999999999999999762 2234569999999987653 5
Q ss_pred CCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeC-------------ChHHHHHHhhhcccc
Q 027388 164 APFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP-------------DANVIIKKLREEHFC 222 (224)
Q Consensus 164 ~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~-------------~~~~~~~~~~~~gf~ 222 (224)
.+||+|++..+++++ +..+...+++++.++|+|||.|++... ....+...+.++||.
T Consensus 131 ~~fD~v~~~~~l~~~--~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 200 (235)
T 3lcc_A 131 ELFDLIFDYVFFCAI--EPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFK 200 (235)
T ss_dssp SCEEEEEEESSTTTS--CGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEE
T ss_pred CCeeEEEEChhhhcC--CHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCe
Confidence 699999999999998 556889999999999999999998533 346888899999985
No 45
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.78 E-value=1.6e-18 Score=135.31 Aligned_cols=115 Identities=19% Similarity=0.315 Sum_probs=96.1
Q ss_pred cCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCC
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (224)
.++.+|||+|||+|.++..++.. .+++|+|+|+.+++.|++++.. ...++.++++|+.+.+.
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~----------~~~~~~~~~~d~~~~~~------ 93 (243)
T 3d2l_A 32 EPGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAME----------TNRHVDFWVQDMRELEL------ 93 (243)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHH----------TTCCCEEEECCGGGCCC------
T ss_pred CCCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhh----------cCCceEEEEcChhhcCC------
Confidence 56789999999999999988755 7999999999999999998752 12458999999887764
Q ss_pred CCCeeEEEEcc-ccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCChHHHHHHh
Q 027388 163 DAPFDICSCQF-AMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVIIKKL 216 (224)
Q Consensus 163 ~~~~D~i~~~~-~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~~~~~~~~ 216 (224)
.++||+|++.. +++|+ ....+...+++++.++|+|||.+++.+++...+.+.+
T Consensus 94 ~~~fD~v~~~~~~~~~~-~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~ 147 (243)
T 3d2l_A 94 PEPVDAITILCDSLNYL-QTEADVKQTFDSAARLLTDGGKLLFDVHSPYKMETLF 147 (243)
T ss_dssp SSCEEEEEECTTGGGGC-CSHHHHHHHHHHHHHHEEEEEEEEEEEECHHHHHTTT
T ss_pred CCCcCEEEEeCCchhhc-CCHHHHHHHHHHHHHhcCCCeEEEEEcCCHHHHHHhc
Confidence 37899999986 88876 3557889999999999999999999999887665543
No 46
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.78 E-value=2.6e-18 Score=135.07 Aligned_cols=120 Identities=26% Similarity=0.451 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEec
Q 027388 70 NNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICG 149 (224)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~ 149 (224)
..++..++......++.+|||+|||+|.++..++.. ..+++|+|+|+.+++.|++++.. ...++.++++
T Consensus 27 ~~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~----------~~~~v~~~~~ 95 (252)
T 1wzn_A 27 IDFVEEIFKEDAKREVRRVLDLACGTGIPTLELAER-GYEVVGLDLHEEMLRVARRKAKE----------RNLKIEFLQG 95 (252)
T ss_dssp HHHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHH----------TTCCCEEEES
T ss_pred HHHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHh----------cCCceEEEEC
Confidence 345555555444456789999999999999998865 45899999999999999998752 1335899999
Q ss_pred cccccccccccCCCCCeeEEEEcc-ccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCC
Q 027388 150 DCYEVHLDKVLADDAPFDICSCQF-AMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (224)
Q Consensus 150 d~~~~~~~~~~~~~~~~D~i~~~~-~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~ 208 (224)
|+.+++. .++||+|++.. .++++ ..++...+++++.++|+|||.+++..++
T Consensus 96 d~~~~~~------~~~fD~v~~~~~~~~~~--~~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 96 DVLEIAF------KNEFDAVTMFFSTIMYF--DEEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp CGGGCCC------CSCEEEEEECSSGGGGS--CHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred Chhhccc------CCCccEEEEcCCchhcC--CHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 9987664 46899999874 44544 5678899999999999999999998876
No 47
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.78 E-value=1.2e-17 Score=132.08 Aligned_cols=143 Identities=17% Similarity=0.155 Sum_probs=106.8
Q ss_pred hhhHHHHHHHHHHhhhccccchhhhccCCceehhhhHHHHHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEE
Q 027388 34 ESTKVFARKVADHYSRRTNQTLEEREASPIIHLKKLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGI 113 (224)
Q Consensus 34 ~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gv 113 (224)
......++++++.|+....... .......+..++... ..++.+|||||||+|.++..++.. ..+++|+
T Consensus 15 ~~~~~~~~~~a~~Yd~~~~~~~----------~~~~~~~~~~~l~~~-~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gv 82 (260)
T 2avn_A 15 LRSWEFYDRIARAYDSMYETPK----------WKLYHRLIGSFLEEY-LKNPCRVLDLGGGTGKWSLFLQER-GFEVVLV 82 (260)
T ss_dssp CCHHHHHHHHHHHHGGGGCSHH----------HHHHHHHHHHHHHHH-CCSCCEEEEETCTTCHHHHHHHTT-TCEEEEE
T ss_pred hhhcchhhHHHHHHHHhccccc----------hhHHHHHHHHHHHHh-cCCCCeEEEeCCCcCHHHHHHHHc-CCeEEEE
Confidence 4456789999999986542110 011222333333333 237789999999999999988765 4589999
Q ss_pred eCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHH
Q 027388 114 DIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVS 193 (224)
Q Consensus 114 D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~ 193 (224)
|+|+.+++.++++.. . .++++|+.+++. +.++||+|++..++.|+. .++..+++++.
T Consensus 83 D~s~~~l~~a~~~~~------------~---~~~~~d~~~~~~-----~~~~fD~v~~~~~~~~~~---~~~~~~l~~~~ 139 (260)
T 2avn_A 83 DPSKEMLEVAREKGV------------K---NVVEAKAEDLPF-----PSGAFEAVLALGDVLSYV---ENKDKAFSEIR 139 (260)
T ss_dssp ESCHHHHHHHHHHTC------------S---CEEECCTTSCCS-----CTTCEEEEEECSSHHHHC---SCHHHHHHHHH
T ss_pred eCCHHHHHHHHhhcC------------C---CEEECcHHHCCC-----CCCCEEEEEEcchhhhcc---ccHHHHHHHHH
Confidence 999999999998854 1 278889887765 568999999988766552 23789999999
Q ss_pred hhccCCeEEEEEeCChHH
Q 027388 194 ALLRPGGTFIGTMPDANV 211 (224)
Q Consensus 194 ~~lk~gG~li~~~~~~~~ 211 (224)
++|+|||.+++.+++...
T Consensus 140 ~~LkpgG~l~~~~~~~~~ 157 (260)
T 2avn_A 140 RVLVPDGLLIATVDNFYT 157 (260)
T ss_dssp HHEEEEEEEEEEEEBHHH
T ss_pred HHcCCCeEEEEEeCChHH
Confidence 999999999999988653
No 48
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.78 E-value=6.3e-19 Score=139.57 Aligned_cols=129 Identities=15% Similarity=0.223 Sum_probs=94.3
Q ss_pred HHHHHHHHhhhccccchhhhccCCceehhhhHHHHHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChh
Q 027388 39 FARKVADHYSRRTNQTLEEREASPIIHLKKLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEG 118 (224)
Q Consensus 39 ~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~ 118 (224)
+|+.++..|+..... ...+...++..+...++.+|||||||+|.++..++. ...+++|+|+|+.
T Consensus 4 ~y~~~a~~y~~~~~~---------------~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~ 67 (261)
T 3ege_A 4 IYNSIGKQYSQTRVP---------------DIRIVNAIINLLNLPKGSVIADIGAGTGGYSVALAN-QGLFVYAVEPSIV 67 (261)
T ss_dssp ---------CCSBCC---------------CHHHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHT-TTCEEEEECSCHH
T ss_pred HHHHHHHHHhhcccc---------------cHHHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHh-CCCEEEEEeCCHH
Confidence 678888888643221 112334444555556789999999999999999886 4569999999999
Q ss_pred HHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccC
Q 027388 119 SIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRP 198 (224)
Q Consensus 119 ~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~ 198 (224)
+++.++++. ++.++++|+.+++. +.++||+|++..+++|+ .++..+++++.++||
T Consensus 68 ~~~~a~~~~---------------~~~~~~~d~~~~~~-----~~~~fD~v~~~~~l~~~----~~~~~~l~~~~~~Lk- 122 (261)
T 3ege_A 68 MRQQAVVHP---------------QVEWFTGYAENLAL-----PDKSVDGVISILAIHHF----SHLEKSFQEMQRIIR- 122 (261)
T ss_dssp HHHSSCCCT---------------TEEEECCCTTSCCS-----CTTCBSEEEEESCGGGC----SSHHHHHHHHHHHBC-
T ss_pred HHHHHHhcc---------------CCEEEECchhhCCC-----CCCCEeEEEEcchHhhc----cCHHHHHHHHHHHhC-
Confidence 998876543 49999999988775 56899999999999998 678899999999999
Q ss_pred CeEEEEEeCC
Q 027388 199 GGTFIGTMPD 208 (224)
Q Consensus 199 gG~li~~~~~ 208 (224)
||++++..++
T Consensus 123 gG~~~~~~~~ 132 (261)
T 3ege_A 123 DGTIVLLTFD 132 (261)
T ss_dssp SSCEEEEEEC
T ss_pred CcEEEEEEcC
Confidence 9977776443
No 49
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.78 E-value=1.1e-17 Score=128.60 Aligned_cols=111 Identities=17% Similarity=0.180 Sum_probs=93.4
Q ss_pred hhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccccc
Q 027388 81 YARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (224)
...++.+|||+|||+|.++..++... .+++|+|+|+.+++.+++++.. ..++.++++|+.+.+
T Consensus 48 ~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~-----------~~~~~~~~~d~~~~~----- 110 (216)
T 3ofk_A 48 SSGAVSNGLEIGCAAGAFTEKLAPHC-KRLTVIDVMPRAIGRACQRTKR-----------WSHISWAATDILQFS----- 110 (216)
T ss_dssp TTSSEEEEEEECCTTSHHHHHHGGGE-EEEEEEESCHHHHHHHHHHTTT-----------CSSEEEEECCTTTCC-----
T ss_pred ccCCCCcEEEEcCCCCHHHHHHHHcC-CEEEEEECCHHHHHHHHHhccc-----------CCCeEEEEcchhhCC-----
Confidence 44567899999999999999987654 5899999999999999999762 226899999998776
Q ss_pred CCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCChH
Q 027388 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDAN 210 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~~ 210 (224)
..++||+|++..+++|+ ........++.++.++|+|||++++.++...
T Consensus 111 -~~~~fD~v~~~~~l~~~-~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 158 (216)
T 3ofk_A 111 -TAELFDLIVVAEVLYYL-EDMTQMRTAIDNMVKMLAPGGHLVFGSARDA 158 (216)
T ss_dssp -CSCCEEEEEEESCGGGS-SSHHHHHHHHHHHHHTEEEEEEEEEEEECHH
T ss_pred -CCCCccEEEEccHHHhC-CCHHHHHHHHHHHHHHcCCCCEEEEEecCCC
Confidence 36899999999999998 2345667899999999999999999876654
No 50
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.77 E-value=8.1e-18 Score=135.05 Aligned_cols=139 Identities=17% Similarity=0.153 Sum_probs=97.2
Q ss_pred CCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCccc--------ccc-cccC------------CC
Q 027388 84 RGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADH--------HQR-RKKF------------SF 142 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~--------~~~-~~~~------------~~ 142 (224)
++.+|||||||+|.+...++.....+|+|+|+|+.|++.|++++...... +.. ..+. ..
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 150 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRAR 150 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhh
Confidence 67899999999998554333334569999999999999999876521000 000 0000 00
Q ss_pred CeeEEeccccc-cccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEe---------------
Q 027388 143 PARLICGDCYE-VHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM--------------- 206 (224)
Q Consensus 143 ~v~~~~~d~~~-~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~--------------- 206 (224)
.+.++.+|+.+ .++.....+.++||+|+++.+++|+....+++..+++++.++|||||+|++..
T Consensus 151 ~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~~ 230 (289)
T 2g72_A 151 VKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLT 230 (289)
T ss_dssp EEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEEE
T ss_pred hceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeeee
Confidence 14567778876 44321111356799999999999953334789999999999999999999851
Q ss_pred ---CChHHHHHHhhhcccc
Q 027388 207 ---PDANVIIKKLREEHFC 222 (224)
Q Consensus 207 ---~~~~~~~~~~~~~gf~ 222 (224)
.....+...|+++||.
T Consensus 231 ~~~~~~~~l~~~l~~aGf~ 249 (289)
T 2g72_A 231 VVPVSEEEVREALVRSGYK 249 (289)
T ss_dssp CCCCCHHHHHHHHHHTTEE
T ss_pred eccCCHHHHHHHHHHcCCe
Confidence 2457888899999984
No 51
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.77 E-value=5.8e-18 Score=132.27 Aligned_cols=112 Identities=22% Similarity=0.369 Sum_probs=93.9
Q ss_pred HHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccc
Q 027388 76 VLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH 155 (224)
Q Consensus 76 ~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 155 (224)
.+..+...++.+|||||||+|.++..++... .+++++|+|+.+++.+++++.. .++ .++.++++|+.+++
T Consensus 13 ~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~--------~~~-~~v~~~~~d~~~~~ 82 (239)
T 1xxl_A 13 MIKTAECRAEHRVLDIGAGAGHTALAFSPYV-QECIGVDATKEMVEVASSFAQE--------KGV-ENVRFQQGTAESLP 82 (239)
T ss_dssp HHHHHTCCTTCEEEEESCTTSHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHHH--------HTC-CSEEEEECBTTBCC
T ss_pred HHHHhCcCCCCEEEEEccCcCHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHHH--------cCC-CCeEEEecccccCC
Confidence 4455566788999999999999999887554 5999999999999999988752 122 25899999998876
Q ss_pred cccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEe
Q 027388 156 LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (224)
Q Consensus 156 ~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~ 206 (224)
. ..++||+|++..+++|+ .++..++.++.++|+|||++++..
T Consensus 83 ~-----~~~~fD~v~~~~~l~~~----~~~~~~l~~~~~~LkpgG~l~~~~ 124 (239)
T 1xxl_A 83 F-----PDDSFDIITCRYAAHHF----SDVRKAVREVARVLKQDGRFLLVD 124 (239)
T ss_dssp S-----CTTCEEEEEEESCGGGC----SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred C-----CCCcEEEEEECCchhhc----cCHHHHHHHHHHHcCCCcEEEEEE
Confidence 5 56899999999999998 567899999999999999999863
No 52
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.77 E-value=9.9e-19 Score=136.39 Aligned_cols=126 Identities=19% Similarity=0.162 Sum_probs=95.9
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccc--ccccc
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV--HLDKV 159 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~--~~~~~ 159 (224)
..++.+|||||||+|.++..++.....+++|+|+|+.|++.|+++... ...++.++++|+.++ ++
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~----------~~~~v~~~~~d~~~~~~~~--- 124 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPR----------QTHKVIPLKGLWEDVAPTL--- 124 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGG----------CSSEEEEEESCHHHHGGGS---
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHh----------cCCCeEEEecCHHHhhccc---
Confidence 457789999999999999988755556899999999999999998762 134689999999876 44
Q ss_pred cCCCCCeeEEEE-ccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCCh-----------------HHHHHHhhhccc
Q 027388 160 LADDAPFDICSC-QFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDA-----------------NVIIKKLREEHF 221 (224)
Q Consensus 160 ~~~~~~~D~i~~-~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~-----------------~~~~~~~~~~gf 221 (224)
++++||+|++ .+.+..-.....+...+++++.++|||||+|++..... ......+.++||
T Consensus 125 --~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF 202 (236)
T 1zx0_A 125 --PDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGF 202 (236)
T ss_dssp --CTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHTTC
T ss_pred --CCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecCcHHHhhchhhhhhhhhccHHHHHHHHHCCC
Confidence 5689999999 55432111133567788999999999999999753221 234557788888
Q ss_pred c
Q 027388 222 C 222 (224)
Q Consensus 222 ~ 222 (224)
.
T Consensus 203 ~ 203 (236)
T 1zx0_A 203 R 203 (236)
T ss_dssp C
T ss_pred C
Confidence 5
No 53
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.77 E-value=2.7e-18 Score=137.14 Aligned_cols=107 Identities=26% Similarity=0.438 Sum_probs=91.6
Q ss_pred HHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccc
Q 027388 77 LVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHL 156 (224)
Q Consensus 77 ~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 156 (224)
+..+...++.+|||||||+|.++..++. ...+++|+|+|+.|++.++++.. ++.+.++|+..++.
T Consensus 50 ~~~l~~~~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~~--------------~~~~~~~d~~~~~~ 114 (279)
T 3ccf_A 50 LQLLNPQPGEFILDLGCGTGQLTEKIAQ-SGAEVLGTDNAATMIEKARQNYP--------------HLHFDVADARNFRV 114 (279)
T ss_dssp HHHHCCCTTCEEEEETCTTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHCT--------------TSCEEECCTTTCCC
T ss_pred HHHhCCCCCCEEEEecCCCCHHHHHHHh-CCCeEEEEECCHHHHHHHHhhCC--------------CCEEEECChhhCCc
Confidence 3344456788999999999999999886 55699999999999999998753 48899999987664
Q ss_pred ccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCC
Q 027388 157 DKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (224)
Q Consensus 157 ~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~ 208 (224)
.++||+|++..+++|+ .++..+++++.++|+|||++++.+++
T Consensus 115 ------~~~fD~v~~~~~l~~~----~d~~~~l~~~~~~LkpgG~l~~~~~~ 156 (279)
T 3ccf_A 115 ------DKPLDAVFSNAMLHWV----KEPEAAIASIHQALKSGGRFVAEFGG 156 (279)
T ss_dssp ------SSCEEEEEEESCGGGC----SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ------CCCcCEEEEcchhhhC----cCHHHHHHHHHHhcCCCcEEEEEecC
Confidence 4789999999999998 56789999999999999999998664
No 54
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.77 E-value=9.7e-18 Score=130.07 Aligned_cols=114 Identities=20% Similarity=0.258 Sum_probs=92.1
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccC
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (224)
..++.+|||+|||+|.++..++.. ..+++++|+|+.+++.+++++...+.. .....++.++++|+..++.
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~----~~~~~~~~~~~~d~~~~~~----- 97 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASK-GYSVTGIDINSEAIRLAETAARSPGLN----QKTGGKAEFKVENASSLSF----- 97 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTCCSCC----SSSSCEEEEEECCTTSCCS-----
T ss_pred CCCCCeEEEECCCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCCc----cccCcceEEEEecccccCC-----
Confidence 357889999999999999998866 559999999999999999987732111 0112357899999988765
Q ss_pred CCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEe
Q 027388 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~ 206 (224)
..+.||+|++..+++++ ........+++++.++|+|||.+++..
T Consensus 98 ~~~~~D~v~~~~~l~~~-~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 98 HDSSFDFAVMQAFLTSV-PDPKERSRIIKEVFRVLKPGAYLYLVE 141 (235)
T ss_dssp CTTCEEEEEEESCGGGC-CCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCceeEEEEcchhhcC-CCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 57899999999999997 234456699999999999999999864
No 55
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.77 E-value=5.7e-18 Score=136.98 Aligned_cols=111 Identities=21% Similarity=0.322 Sum_probs=92.1
Q ss_pred hhcCCCeEEEecCCCchhHHHHH--hhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccc
Q 027388 81 YARRGDVVLDLACGKGGDLIKWD--KAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK 158 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~G~~~~~l~--~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 158 (224)
...++.+|||||||+|.++..++ .....+++|+|+|+.+++.|++++.. .++..+++++++|+.+++.
T Consensus 115 ~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~--------~~~~~~v~~~~~d~~~~~~-- 184 (305)
T 3ocj_A 115 HLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAG--------HALAGQITLHRQDAWKLDT-- 184 (305)
T ss_dssp HCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTT--------STTGGGEEEEECCGGGCCC--
T ss_pred hCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHh--------cCCCCceEEEECchhcCCc--
Confidence 45778999999999999998874 23456899999999999999999872 3445569999999988765
Q ss_pred ccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEe
Q 027388 159 VLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (224)
Q Consensus 159 ~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~ 206 (224)
+ ++||+|++..+++|+ ........+++++.++|+|||+|++..
T Consensus 185 ---~-~~fD~v~~~~~~~~~-~~~~~~~~~l~~~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 185 ---R-EGYDLLTSNGLNIYE-PDDARVTELYRRFWQALKPGGALVTSF 227 (305)
T ss_dssp ---C-SCEEEEECCSSGGGC-CCHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ---c-CCeEEEEECChhhhc-CCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 4 899999999999987 234445568999999999999999875
No 56
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.77 E-value=2.8e-18 Score=136.64 Aligned_cols=108 Identities=22% Similarity=0.366 Sum_probs=92.1
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccccc
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (224)
..++.+|||||||+|.++..++... ..+++++|+|+.+++.+++++.. .+. .++.++++|+.+++.
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~--------~~~-~~~~~~~~d~~~~~~---- 101 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEK--------NGI-KNVKFLQANIFSLPF---- 101 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHH--------TTC-CSEEEEECCGGGCCS----
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH--------cCC-CCcEEEEcccccCCC----
Confidence 4678899999999999999988764 56899999999999999998762 122 358999999988765
Q ss_pred CCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeC
Q 027388 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~ 207 (224)
+.++||+|++..+++|+ +++..+++++.++|+|||++++..+
T Consensus 102 -~~~~fD~v~~~~~l~~~----~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (276)
T 3mgg_A 102 -EDSSFDHIFVCFVLEHL----QSPEEALKSLKKVLKPGGTITVIEG 143 (276)
T ss_dssp -CTTCEEEEEEESCGGGC----SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -CCCCeeEEEEechhhhc----CCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 56899999999999998 5567999999999999999998753
No 57
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.76 E-value=3.5e-18 Score=134.70 Aligned_cols=116 Identities=14% Similarity=0.042 Sum_probs=88.8
Q ss_pred HHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccc
Q 027388 73 IKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCY 152 (224)
Q Consensus 73 ~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~ 152 (224)
+..++..+...++.+|||||||+|.++..++.. ..+|+++|+|+.|++.|++++.. . ++..++.
T Consensus 34 ~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~-g~~V~gvD~S~~ml~~Ar~~~~~------------~---~v~~~~~ 97 (261)
T 3iv6_A 34 RENDIFLENIVPGSTVAVIGASTRFLIEKALER-GASVTVFDFSQRMCDDLAEALAD------------R---CVTIDLL 97 (261)
T ss_dssp HHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTSS------------S---CCEEEEC
T ss_pred HHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHh------------c---cceeeee
Confidence 444555556678899999999999999998865 45999999999999999999762 1 2333333
Q ss_pred ccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeC
Q 027388 153 EVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (224)
Q Consensus 153 ~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~ 207 (224)
+.+........++||+|+++.+++|+ ..++...++.++.++| |||.++++.+
T Consensus 98 ~~~~~~~~~~~~~fD~Vv~~~~l~~~--~~~~~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 98 DITAEIPKELAGHFDFVLNDRLINRF--TTEEARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp CTTSCCCGGGTTCCSEEEEESCGGGS--CHHHHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred ecccccccccCCCccEEEEhhhhHhC--CHHHHHHHHHHHHHhC-cCcEEEEEec
Confidence 33220000024789999999999987 6678899999999999 9999999865
No 58
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.76 E-value=6.9e-18 Score=128.84 Aligned_cols=109 Identities=15% Similarity=0.166 Sum_probs=91.0
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccC
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (224)
..++.+|||+|||+|.++..++.....+++|+|+|+.+++.+++++.. ...++.++++|+.+++.
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~----------~~~~~~~~~~d~~~~~~----- 85 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRE----------NNFKLNISKGDIRKLPF----- 85 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHH----------HTCCCCEEECCTTSCCS-----
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHh----------cCCceEEEECchhhCCC-----
Confidence 456789999999999985555445556999999999999999988651 12458899999988765
Q ss_pred CCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeC
Q 027388 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~ 207 (224)
+.++||+|++..+++|+ +..++..+++++.++|+|||++++..+
T Consensus 86 ~~~~fD~v~~~~~l~~~--~~~~~~~~l~~~~~~LkpgG~l~~~~~ 129 (209)
T 2p8j_A 86 KDESMSFVYSYGTIFHM--RKNDVKEAIDEIKRVLKPGGLACINFL 129 (209)
T ss_dssp CTTCEEEEEECSCGGGS--CHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCceeEEEEcChHHhC--CHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 56899999999999987 678899999999999999999998754
No 59
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.76 E-value=7.9e-18 Score=136.85 Aligned_cols=116 Identities=12% Similarity=0.137 Sum_probs=95.2
Q ss_pred HHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccc
Q 027388 74 KSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYE 153 (224)
Q Consensus 74 ~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~ 153 (224)
..++..+...++.+|||||||+|.++..++.....+++|+|+|+.+++.+++++.. .++..++.++++|+.+
T Consensus 80 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~--------~~~~~~v~~~~~d~~~ 151 (318)
T 2fk8_A 80 DLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLAS--------IDTNRSRQVLLQGWED 151 (318)
T ss_dssp HHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHT--------SCCSSCEEEEESCGGG
T ss_pred HHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh--------cCCCCceEEEECChHH
Confidence 33444444567889999999999999998866455999999999999999998762 3444568999999865
Q ss_pred cccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeC
Q 027388 154 VHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (224)
Q Consensus 154 ~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~ 207 (224)
++ ++||+|++..+++|+ +.+++..+++++.++|+|||.+++.++
T Consensus 152 ~~--------~~fD~v~~~~~l~~~--~~~~~~~~l~~~~~~LkpgG~l~~~~~ 195 (318)
T 2fk8_A 152 FA--------EPVDRIVSIEAFEHF--GHENYDDFFKRCFNIMPADGRMTVQSS 195 (318)
T ss_dssp CC--------CCCSEEEEESCGGGT--CGGGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CC--------CCcCEEEEeChHHhc--CHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 42 689999999999998 556789999999999999999998754
No 60
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.76 E-value=5.5e-18 Score=133.95 Aligned_cols=139 Identities=13% Similarity=0.181 Sum_probs=101.2
Q ss_pred cCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccc--------------------cccccCCC
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHH--------------------QRRKKFSF 142 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~--------------------~~~~~~~~ 142 (224)
.++.+|||||||+|.++..++.....+++|+|+|+.+++.+++++....... .....+..
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 4567999999999999988775554589999999999999998876211000 00000011
Q ss_pred Ce-eEEeccccccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeC--------------
Q 027388 143 PA-RLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP-------------- 207 (224)
Q Consensus 143 ~v-~~~~~d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~-------------- 207 (224)
++ .++++|+.+...... ...++||+|++..+++++.....++..+++++.++|+|||+|++...
T Consensus 135 ~v~~~~~~d~~~~~~~~~-~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~ 213 (265)
T 2i62_A 135 AIKQVLKCDVTQSQPLGG-VSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKFS 213 (265)
T ss_dssp HEEEEEECCTTSSSTTTT-CCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEE
T ss_pred hheeEEEeeeccCCCCCc-cccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCcccc
Confidence 26 889999877542100 02278999999999996544457899999999999999999998642
Q ss_pred ----ChHHHHHHhhhcccc
Q 027388 208 ----DANVIIKKLREEHFC 222 (224)
Q Consensus 208 ----~~~~~~~~~~~~gf~ 222 (224)
....+...+.++||.
T Consensus 214 ~~~~~~~~~~~~l~~aGf~ 232 (265)
T 2i62_A 214 SLPLGWETVRDAVEEAGYT 232 (265)
T ss_dssp CCCCCHHHHHHHHHHTTCE
T ss_pred ccccCHHHHHHHHHHCCCE
Confidence 344888999999985
No 61
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.76 E-value=2.5e-17 Score=123.98 Aligned_cols=119 Identities=22% Similarity=0.261 Sum_probs=101.7
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccC
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (224)
..++.+|||+|||+|.++..++.. ..+++++|+|+.+++.++++.. ++.++++|+.+.+.
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~~~~~~~~a~~~~~--------------~~~~~~~d~~~~~~----- 103 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ-GHDVLGTDLDPILIDYAKQDFP--------------EARWVVGDLSVDQI----- 103 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHCT--------------TSEEEECCTTTSCC-----
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC-CCcEEEEcCCHHHHHHHHHhCC--------------CCcEEEcccccCCC-----
Confidence 467889999999999999988765 4589999999999999998865 37899999987665
Q ss_pred CCCCeeEEEEc-cccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCC-----hHHHHHHhhhcccc
Q 027388 162 DDAPFDICSCQ-FAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD-----ANVIIKKLREEHFC 222 (224)
Q Consensus 162 ~~~~~D~i~~~-~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~-----~~~~~~~~~~~gf~ 222 (224)
+.+.||+|++. .+++++ +.++...++..+.++|+|||.+++..++ ...+...+.+.||.
T Consensus 104 ~~~~~D~i~~~~~~~~~~--~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~ 168 (195)
T 3cgg_A 104 SETDFDLIVSAGNVMGFL--AEDGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLE 168 (195)
T ss_dssp CCCCEEEEEECCCCGGGS--CHHHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEE
T ss_pred CCCceeEEEECCcHHhhc--ChHHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCE
Confidence 46789999998 678876 6677899999999999999999997654 46888888888874
No 62
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.76 E-value=1.4e-17 Score=127.37 Aligned_cols=124 Identities=19% Similarity=0.224 Sum_probs=100.5
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccC
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (224)
..++.+|||+|||+|.++..++.....+++++|+|+.+++.++++... ..++.++++|+.+++.
T Consensus 40 ~~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~-----------~~~i~~~~~d~~~~~~----- 103 (215)
T 2pxx_A 40 LRPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH-----------VPQLRWETMDVRKLDF----- 103 (215)
T ss_dssp CCTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT-----------CTTCEEEECCTTSCCS-----
T ss_pred cCCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc-----------CCCcEEEEcchhcCCC-----
Confidence 367889999999999999998876555899999999999999998761 2358999999987765
Q ss_pred CCCCeeEEEEccccccccC-----------CHHHHHHHHHHHHhhccCCeEEEEEeCChHHHHH-Hhhhccc
Q 027388 162 DDAPFDICSCQFAMHYSWS-----------TEARARRALANVSALLRPGGTFIGTMPDANVIIK-KLREEHF 221 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~~~~~-----------~~~~~~~~l~~~~~~lk~gG~li~~~~~~~~~~~-~~~~~gf 221 (224)
+.++||+|++..+++++.. ...+...+++++.++|+|||.+++.+++...... .+...+|
T Consensus 104 ~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~ 175 (215)
T 2pxx_A 104 PSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAPHFRTRHYAQAYY 175 (215)
T ss_dssp CSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCHHHHHHHHCCGGG
T ss_pred CCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCcHHHHHHHhcccc
Confidence 4678999999998876631 1457899999999999999999999998765544 4444454
No 63
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.75 E-value=1.2e-17 Score=128.79 Aligned_cols=129 Identities=17% Similarity=0.219 Sum_probs=96.6
Q ss_pred hHHHHHHHHHHhhhccccchhhhccCCceehhhhHHHHHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeC
Q 027388 36 TKVFARKVADHYSRRTNQTLEEREASPIIHLKKLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDI 115 (224)
Q Consensus 36 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~ 115 (224)
+-.+|+..++.|+.+..... ..+...+. .+.. ..++.+|||+|||+|.++..++.. +++|+
T Consensus 13 ~~~~~~~~~~~y~~~~~~~~-----------~~~~~~~~-~l~~--~~~~~~vLDiG~G~G~~~~~l~~~-----~~vD~ 73 (219)
T 1vlm_A 13 MWHIFERFVNEYERWFLVHR-----------FAYLSELQ-AVKC--LLPEGRGVEIGVGTGRFAVPLKIK-----IGVEP 73 (219)
T ss_dssp TTHHHHHTHHHHHHHHHHTH-----------HHHHHHHH-HHHH--HCCSSCEEEETCTTSTTHHHHTCC-----EEEES
T ss_pred heeecchhHHHHHHHHHhcc-----------hhHHHHHH-HHHH--hCCCCcEEEeCCCCCHHHHHHHHH-----hccCC
Confidence 34577777777875443321 11111122 1222 234889999999999999887533 99999
Q ss_pred ChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhh
Q 027388 116 AEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSAL 195 (224)
Q Consensus 116 s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~ 195 (224)
|+.+++.++++ . +.++++|+.+++. ..+.||+|++..+++|+ +++..+++++.++
T Consensus 74 s~~~~~~a~~~-~---------------~~~~~~d~~~~~~-----~~~~fD~v~~~~~l~~~----~~~~~~l~~~~~~ 128 (219)
T 1vlm_A 74 SERMAEIARKR-G---------------VFVLKGTAENLPL-----KDESFDFALMVTTICFV----DDPERALKEAYRI 128 (219)
T ss_dssp CHHHHHHHHHT-T---------------CEEEECBTTBCCS-----CTTCEEEEEEESCGGGS----SCHHHHHHHHHHH
T ss_pred CHHHHHHHHhc-C---------------CEEEEcccccCCC-----CCCCeeEEEEcchHhhc----cCHHHHHHHHHHH
Confidence 99999999876 2 7889999887765 46789999999999998 5678999999999
Q ss_pred ccCCeEEEEEeCC
Q 027388 196 LRPGGTFIGTMPD 208 (224)
Q Consensus 196 lk~gG~li~~~~~ 208 (224)
|+|||.+++..++
T Consensus 129 L~pgG~l~i~~~~ 141 (219)
T 1vlm_A 129 LKKGGYLIVGIVD 141 (219)
T ss_dssp EEEEEEEEEEEEC
T ss_pred cCCCcEEEEEEeC
Confidence 9999999998554
No 64
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.75 E-value=2.9e-18 Score=133.90 Aligned_cols=119 Identities=17% Similarity=0.131 Sum_probs=90.5
Q ss_pred hHHHHHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEe
Q 027388 69 LNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLIC 148 (224)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~ 148 (224)
...+++.+... ...++.+|||||||+|..+..+++....++++||+|+.+++.|+++... ...+++++.
T Consensus 46 e~~~m~~~a~~-~~~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~----------~~~~~~~~~ 114 (236)
T 3orh_A 46 ETPYMHALAAA-ASSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPR----------QTHKVIPLK 114 (236)
T ss_dssp GHHHHHHHHHH-HTTTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGG----------CSSEEEEEE
T ss_pred HHHHHHHHHHh-hccCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhh----------CCCceEEEe
Confidence 33444444333 3467889999999999999888766667899999999999999998762 244578888
Q ss_pred ccccccccccccCCCCCeeEEEEc-----cccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 149 GDCYEVHLDKVLADDAPFDICSCQ-----FAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 149 ~d~~~~~~~~~~~~~~~~D~i~~~-----~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
+|+...... .+.++||.|+.. ..++|+ .+...+++++.|+|||||+|++.
T Consensus 115 ~~a~~~~~~---~~~~~FD~i~~D~~~~~~~~~~~----~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 115 GLWEDVAPT---LPDGHFDGILYDTYPLSEETWHT----HQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp SCHHHHGGG---SCTTCEEEEEECCCCCBGGGTTT----HHHHHHHHTHHHHEEEEEEEEEC
T ss_pred ehHHhhccc---ccccCCceEEEeeeecccchhhh----cchhhhhhhhhheeCCCCEEEEE
Confidence 887654321 146889999753 344444 78999999999999999999875
No 65
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.75 E-value=9.1e-18 Score=132.32 Aligned_cols=110 Identities=20% Similarity=0.254 Sum_probs=92.6
Q ss_pred HHHHHHhhcCCCeEEEecCCCchhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccc
Q 027388 75 SVLVQLYARRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYE 153 (224)
Q Consensus 75 ~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~ 153 (224)
.++..+...++.+|||||||+|.++..++... ..+++++|+|+.+++.++++.. ++.++++|+.+
T Consensus 24 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~--------------~~~~~~~d~~~ 89 (259)
T 2p35_A 24 DLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLP--------------NTNFGKADLAT 89 (259)
T ss_dssp HHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHST--------------TSEEEECCTTT
T ss_pred HHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCC--------------CcEEEECChhh
Confidence 34444445677899999999999999887652 5689999999999999998743 48899999887
Q ss_pred cccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCC
Q 027388 154 VHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (224)
Q Consensus 154 ~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~ 208 (224)
++ ..++||+|++..+++|+ +++..+++++.++|+|||++++.+++
T Consensus 90 ~~------~~~~fD~v~~~~~l~~~----~~~~~~l~~~~~~L~pgG~l~~~~~~ 134 (259)
T 2p35_A 90 WK------PAQKADLLYANAVFQWV----PDHLAVLSQLMDQLESGGVLAVQMPD 134 (259)
T ss_dssp CC------CSSCEEEEEEESCGGGS----TTHHHHHHHHGGGEEEEEEEEEEEEC
T ss_pred cC------ccCCcCEEEEeCchhhC----CCHHHHHHHHHHhcCCCeEEEEEeCC
Confidence 65 25789999999999998 67889999999999999999998754
No 66
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.75 E-value=6.9e-18 Score=132.11 Aligned_cols=112 Identities=12% Similarity=0.052 Sum_probs=90.8
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccC
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (224)
..++.+|||||||+|.++..++.... +++|+|+|+.+++.++++.. ..++.++++|+.+.+......
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~~~~~a~~~~~------------~~~~~~~~~d~~~~~~~~~~~ 120 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKSALEIAAKENT------------AANISYRLLDGLVPEQAAQIH 120 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHHHHHHHHHHSC------------CTTEEEEECCTTCHHHHHHHH
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHHHHHHHHHhCc------------ccCceEEECcccccccccccc
Confidence 46778999999999999999986555 99999999999999999875 336999999998765421110
Q ss_pred CCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCC
Q 027388 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~ 208 (224)
....||+|++..+++|+ +..+...+++++.++|+|||++++....
T Consensus 121 ~~~~~d~v~~~~~~~~~--~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 165 (245)
T 3ggd_A 121 SEIGDANIYMRTGFHHI--PVEKRELLGQSLRILLGKQGAMYLIELG 165 (245)
T ss_dssp HHHCSCEEEEESSSTTS--CGGGHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred cccCccEEEEcchhhcC--CHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 11359999999999998 5557899999999999999998776443
No 67
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.74 E-value=2.4e-17 Score=128.34 Aligned_cols=104 Identities=26% Similarity=0.383 Sum_probs=87.9
Q ss_pred cCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCC
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (224)
.++.+|||+|||+|.++..++.... +++|+|+|+.+++.++++.. ++.++++|+.+++.
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~~~~--------------~~~~~~~d~~~~~~------ 97 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG-DTAGLELSEDMLTHARKRLP--------------DATLHQGDMRDFRL------ 97 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS-EEEEEESCHHHHHHHHHHCT--------------TCEEEECCTTTCCC------
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhCC--------------CCEEEECCHHHccc------
Confidence 5678999999999999998876544 89999999999999998854 48899999987653
Q ss_pred CCCeeEEEEcc-ccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCC
Q 027388 163 DAPFDICSCQF-AMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (224)
Q Consensus 163 ~~~~D~i~~~~-~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~ 208 (224)
.++||+|+|.. +++|+ ....+...+++++.++|+|||.+++..++
T Consensus 98 ~~~~D~v~~~~~~~~~~-~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 143 (239)
T 3bxo_A 98 GRKFSAVVSMFSSVGYL-KTTEELGAAVASFAEHLEPGGVVVVEPWW 143 (239)
T ss_dssp SSCEEEEEECTTGGGGC-CSHHHHHHHHHHHHHTEEEEEEEEECCCC
T ss_pred CCCCcEEEEcCchHhhc-CCHHHHHHHHHHHHHhcCCCeEEEEEecc
Confidence 57899999654 88876 34467899999999999999999998654
No 68
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.74 E-value=6.4e-18 Score=125.06 Aligned_cols=101 Identities=15% Similarity=0.237 Sum_probs=86.3
Q ss_pred HhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccc
Q 027388 80 LYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKV 159 (224)
Q Consensus 80 ~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 159 (224)
+...++.+|||+|||+|.++..++.... +++++|+|+.+++.++++.. ++.+..+| .+.
T Consensus 13 ~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~--------------~v~~~~~d---~~~--- 71 (170)
T 3i9f_A 13 IFEGKKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIALKEVKEKFD--------------SVITLSDP---KEI--- 71 (170)
T ss_dssp HHSSCCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHHHHHHHHCT--------------TSEEESSG---GGS---
T ss_pred cCcCCCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHHHhCC--------------CcEEEeCC---CCC---
Confidence 3456788999999999999999886654 99999999999999998733 48888888 333
Q ss_pred cCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeC
Q 027388 160 LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (224)
Q Consensus 160 ~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~ 207 (224)
+.+.||+|++..+++|+ +++..+++++.++|+|||.+++..+
T Consensus 72 --~~~~~D~v~~~~~l~~~----~~~~~~l~~~~~~L~pgG~l~~~~~ 113 (170)
T 3i9f_A 72 --PDNSVDFILFANSFHDM----DDKQHVISEVKRILKDDGRVIIIDW 113 (170)
T ss_dssp --CTTCEEEEEEESCSTTC----SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred --CCCceEEEEEccchhcc----cCHHHHHHHHHHhcCCCCEEEEEEc
Confidence 46799999999999998 5678999999999999999998743
No 69
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.74 E-value=3.4e-17 Score=132.03 Aligned_cols=124 Identities=19% Similarity=0.222 Sum_probs=97.0
Q ss_pred HHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccc
Q 027388 73 IKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCY 152 (224)
Q Consensus 73 ~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~ 152 (224)
...++..+. ..+.+|||||||+|.++..++.. ..+++|+|+|+.+++.|++++...+. .+..++.++++|+.
T Consensus 72 ~~~~~~~~~-~~~~~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~------~~~~~v~~~~~d~~ 143 (299)
T 3g2m_A 72 AREFATRTG-PVSGPVLELAAGMGRLTFPFLDL-GWEVTALELSTSVLAAFRKRLAEAPA------DVRDRCTLVQGDMS 143 (299)
T ss_dssp HHHHHHHHC-CCCSCEEEETCTTTTTHHHHHTT-TCCEEEEESCHHHHHHHHHHHHTSCH------HHHTTEEEEECBTT
T ss_pred HHHHHHhhC-CCCCcEEEEeccCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHhhccc------ccccceEEEeCchh
Confidence 333444432 34459999999999999998865 46899999999999999999762110 01156999999998
Q ss_pred ccccccccCCCCCeeEEEEc-cccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCChHHH
Q 027388 153 EVHLDKVLADDAPFDICSCQ-FAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVI 212 (224)
Q Consensus 153 ~~~~~~~~~~~~~~D~i~~~-~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~~~~ 212 (224)
+++. .++||+|++. .+++++ +.++...+++++.++|+|||+|++.+++....
T Consensus 144 ~~~~------~~~fD~v~~~~~~~~~~--~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 196 (299)
T 3g2m_A 144 AFAL------DKRFGTVVISSGSINEL--DEADRRGLYASVREHLEPGGKFLLSLAMSEAA 196 (299)
T ss_dssp BCCC------SCCEEEEEECHHHHTTS--CHHHHHHHHHHHHHHEEEEEEEEEEEECCHHH
T ss_pred cCCc------CCCcCEEEECCcccccC--CHHHHHHHHHHHHHHcCCCcEEEEEeecCccc
Confidence 8764 5789999865 567665 56678999999999999999999999887765
No 70
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.73 E-value=2.8e-17 Score=132.24 Aligned_cols=126 Identities=21% Similarity=0.274 Sum_probs=92.0
Q ss_pred cCCCeEEEecCCCchhHHHHHhh-cCCeEEEEeCChhHHHHHHHhccCCccc----------------------------
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADH---------------------------- 133 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~-~~~~~~gvD~s~~~~~~a~~~~~~~~~~---------------------------- 133 (224)
.++++|||||||+|.++..++.. ...+++|+|+|+.+++.|++++......
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 36789999999999999998876 3569999999999999999987632211
Q ss_pred ---------------------ccccccCCCCeeEEeccccccccccccCCCCCeeEEEEcccccccc--CCHHHHHHHHH
Q 027388 134 ---------------------HQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSW--STEARARRALA 190 (224)
Q Consensus 134 ---------------------~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~--~~~~~~~~~l~ 190 (224)
+........++.|.++|+............+.||+|+|..+++|+. .+..++..+++
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~ 204 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFR 204 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHH
Confidence 0001112357999999987654111111468999999999997761 02337899999
Q ss_pred HHHhhccCCeEEEEEeCC
Q 027388 191 NVSALLRPGGTFIGTMPD 208 (224)
Q Consensus 191 ~~~~~lk~gG~li~~~~~ 208 (224)
++.++|+|||+|++...+
T Consensus 205 ~~~~~LkpGG~lil~~~~ 222 (292)
T 3g07_A 205 RIYRHLRPGGILVLEPQP 222 (292)
T ss_dssp HHHHHEEEEEEEEEECCC
T ss_pred HHHHHhCCCcEEEEecCC
Confidence 999999999999997544
No 71
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.73 E-value=3.1e-17 Score=132.26 Aligned_cols=111 Identities=14% Similarity=0.194 Sum_probs=90.2
Q ss_pred hcCCCeEEEecCCCchhHHHHHh--hcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccc-
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDK--AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK- 158 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~--~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~- 158 (224)
..++.+|||||||+|.++..++. ....+++|+|+|+.+++.|++++... .....++.++++|+.+++...
T Consensus 34 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-------~~~~~~v~~~~~d~~~~~~~~~ 106 (299)
T 3g5t_A 34 DGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGS-------PDTYKNVSFKISSSDDFKFLGA 106 (299)
T ss_dssp CSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHC-------C-CCTTEEEEECCTTCCGGGCT
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhc-------cCCCCceEEEEcCHHhCCcccc
Confidence 45788999999999999999986 35679999999999999999987521 022457999999999877521
Q ss_pred ccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEE
Q 027388 159 VLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIG 204 (224)
Q Consensus 159 ~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~ 204 (224)
.....++||+|++..+++|+ ++..++.++.++|+|||.|++
T Consensus 107 ~~~~~~~fD~V~~~~~l~~~-----~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 107 DSVDKQKIDMITAVECAHWF-----DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp TTTTSSCEEEEEEESCGGGS-----CHHHHHHHHHHHEEEEEEEEE
T ss_pred ccccCCCeeEEeHhhHHHHh-----CHHHHHHHHHHhcCCCcEEEE
Confidence 00012799999999999986 578999999999999999988
No 72
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.73 E-value=7.1e-17 Score=124.67 Aligned_cols=111 Identities=26% Similarity=0.398 Sum_probs=92.4
Q ss_pred cCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCC
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (224)
.++.+|||+|||+|.++..++.... +++++|+|+.+++.+++++... ..++.++++|+.+++. +
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~----------~~~~~~~~~d~~~~~~-----~ 100 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYGF-EVVGVDISEDMIRKAREYAKSR----------ESNVEFIVGDARKLSF-----E 100 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHT----------TCCCEEEECCTTSCCS-----C
T ss_pred CCCCeEEEEeccCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhc----------CCCceEEECchhcCCC-----C
Confidence 4578999999999999988876544 9999999999999999987521 2468999999987664 4
Q ss_pred CCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCChHH
Q 027388 163 DAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANV 211 (224)
Q Consensus 163 ~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~~~ 211 (224)
.++||+|++..++++. ...+...+++++.++|+|||.+++..++...
T Consensus 101 ~~~~D~v~~~~~~~~~--~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 147 (227)
T 1ve3_A 101 DKTFDYVIFIDSIVHF--EPLELNQVFKEVRRVLKPSGKFIMYFTDLRE 147 (227)
T ss_dssp TTCEEEEEEESCGGGC--CHHHHHHHHHHHHHHEEEEEEEEEEEECHHH
T ss_pred CCcEEEEEEcCchHhC--CHHHHHHHHHHHHHHcCCCcEEEEEecChHH
Confidence 6799999999985544 4578899999999999999999999887543
No 73
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.73 E-value=1.3e-16 Score=121.51 Aligned_cols=125 Identities=13% Similarity=0.019 Sum_probs=100.0
Q ss_pred HHHHHhhcCCCeEEEecCCCchhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccc
Q 027388 76 VLVQLYARRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV 154 (224)
Q Consensus 76 ~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~ 154 (224)
++..+...++.+|||+|||+|.++..++... ..+++++|+|+.+++.|++++.. .++ .++.++++|+.+.
T Consensus 32 ~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~--------~~~-~~v~~~~~d~~~~ 102 (204)
T 3e05_A 32 TLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKK--------FVA-RNVTLVEAFAPEG 102 (204)
T ss_dssp HHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHH--------HTC-TTEEEEECCTTTT
T ss_pred HHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHH--------hCC-CcEEEEeCChhhh
Confidence 4444556788999999999999999988764 46899999999999999998762 233 4689999998654
Q ss_pred ccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCC---hHHHHHHhhhccc
Q 027388 155 HLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD---ANVIIKKLREEHF 221 (224)
Q Consensus 155 ~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~---~~~~~~~~~~~gf 221 (224)
.. ....||+|++..+++ +...+++++.++|+|||++++..+. ...+...+++.||
T Consensus 103 ~~-----~~~~~D~i~~~~~~~-------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~g~ 160 (204)
T 3e05_A 103 LD-----DLPDPDRVFIGGSGG-------MLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGY 160 (204)
T ss_dssp CT-----TSCCCSEEEESCCTT-------CHHHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHHHTTC
T ss_pred hh-----cCCCCCEEEECCCCc-------CHHHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHHHCCC
Confidence 32 246899999988764 4568999999999999999998765 3567778888887
No 74
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.72 E-value=6.2e-17 Score=128.73 Aligned_cols=118 Identities=14% Similarity=0.124 Sum_probs=90.7
Q ss_pred HHHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhc-C-CeEEEEeCChh------HHHHHHHhccCCcccccccccCCCC
Q 027388 72 WIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAK-I-GYYVGIDIAEG------SIEDCRTRYNGDADHHQRRKKFSFP 143 (224)
Q Consensus 72 ~~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~-~-~~~~gvD~s~~------~~~~a~~~~~~~~~~~~~~~~~~~~ 143 (224)
....++..+...++.+|||||||+|.++..++... . .+++|+|+|+. +++.+++++.. .++..+
T Consensus 31 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~--------~~~~~~ 102 (275)
T 3bkx_A 31 HRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLA--------GPLGDR 102 (275)
T ss_dssp HHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHT--------STTGGG
T ss_pred HHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHh--------cCCCCc
Confidence 34445555566788999999999999999988653 2 69999999997 99999998762 233456
Q ss_pred eeEEecc-c--cccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEe
Q 027388 144 ARLICGD-C--YEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (224)
Q Consensus 144 v~~~~~d-~--~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~ 206 (224)
+.++++| + ..++. +.++||+|++..+++|+ .+...+++.+.++++|||.+++..
T Consensus 103 v~~~~~d~~~~~~~~~-----~~~~fD~v~~~~~l~~~----~~~~~~~~~~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 103 LTVHFNTNLSDDLGPI-----ADQHFDRVVLAHSLWYF----ASANALALLFKNMAAVCDHVDVAE 159 (275)
T ss_dssp EEEECSCCTTTCCGGG-----TTCCCSEEEEESCGGGS----SCHHHHHHHHHHHTTTCSEEEEEE
T ss_pred eEEEECChhhhccCCC-----CCCCEEEEEEccchhhC----CCHHHHHHHHHHHhCCCCEEEEEE
Confidence 8999998 3 33333 46899999999999998 334457777777777899999863
No 75
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.72 E-value=1.1e-16 Score=120.50 Aligned_cols=111 Identities=17% Similarity=0.107 Sum_probs=91.2
Q ss_pred cCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCC
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (224)
.++.+|||+|||+|.++..++.....+++++|+|+.+++.|++++.. .++ .+++++++|+.+..... .
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~--------~~~-~~v~~~~~d~~~~~~~~---~ 110 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEA--------LGL-SGATLRRGAVAAVVAAG---T 110 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHH--------HTC-SCEEEEESCHHHHHHHC---C
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHH--------cCC-CceEEEEccHHHHHhhc---c
Confidence 57889999999999999987766667899999999999999999762 233 46999999988764210 3
Q ss_pred CCCeeEEEEccccccccCCHHHHHHHHHHHHh--hccCCeEEEEEeCC
Q 027388 163 DAPFDICSCQFAMHYSWSTEARARRALANVSA--LLRPGGTFIGTMPD 208 (224)
Q Consensus 163 ~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~--~lk~gG~li~~~~~ 208 (224)
.++||+|+++..+++. ..+...++..+.+ +|+|||++++.++.
T Consensus 111 ~~~fD~i~~~~p~~~~---~~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 111 TSPVDLVLADPPYNVD---SADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp SSCCSEEEECCCTTSC---HHHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred CCCccEEEECCCCCcc---hhhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 5789999998886652 4678899999999 99999999998764
No 76
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.72 E-value=6.9e-17 Score=129.34 Aligned_cols=105 Identities=16% Similarity=0.159 Sum_probs=90.0
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccC
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (224)
..++.+|||+|||+|.++..++..+ .+++|+|+|+.+++.+++++.. .+ .++.++++|+.+.+.
T Consensus 118 ~~~~~~vLD~GcG~G~~~~~l~~~g-~~v~~vD~s~~~~~~a~~~~~~--------~~--~~~~~~~~d~~~~~~----- 181 (286)
T 3m70_A 118 IISPCKVLDLGCGQGRNSLYLSLLG-YDVTSWDHNENSIAFLNETKEK--------EN--LNISTALYDINAANI----- 181 (286)
T ss_dssp HSCSCEEEEESCTTCHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHH--------TT--CCEEEEECCGGGCCC-----
T ss_pred ccCCCcEEEECCCCCHHHHHHHHCC-CeEEEEECCHHHHHHHHHHHHH--------cC--CceEEEEeccccccc-----
Confidence 3478899999999999999988664 4999999999999999998762 12 268999999987654
Q ss_pred CCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
.++||+|++..+++|+ +.++...+++++.++|+|||.+++.
T Consensus 182 -~~~fD~i~~~~~~~~~--~~~~~~~~l~~~~~~LkpgG~l~i~ 222 (286)
T 3m70_A 182 -QENYDFIVSTVVFMFL--NRERVPSIIKNMKEHTNVGGYNLIV 222 (286)
T ss_dssp -CSCEEEEEECSSGGGS--CGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred -cCCccEEEEccchhhC--CHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 5789999999999998 6677889999999999999997764
No 77
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.72 E-value=7.2e-17 Score=122.09 Aligned_cols=107 Identities=16% Similarity=0.152 Sum_probs=89.2
Q ss_pred hhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccccc
Q 027388 81 YARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (224)
...++.+|||+|||+|.++..++.. ..+++++|+|+.+++.+++++.. .++ .++.++++|+.+.+.
T Consensus 29 ~~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~--------~~~-~~~~~~~~d~~~~~~---- 94 (199)
T 2xvm_A 29 KVVKPGKTLDLGCGNGRNSLYLAAN-GYDVDAWDKNAMSIANVERIKSI--------ENL-DNLHTRVVDLNNLTF---- 94 (199)
T ss_dssp TTSCSCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHH--------HTC-TTEEEEECCGGGCCC----
T ss_pred hccCCCeEEEEcCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHh--------CCC-CCcEEEEcchhhCCC----
Confidence 3356789999999999999988865 45999999999999999988752 122 248999999887653
Q ss_pred CCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
.++||+|++..+++|+ +.++...+++++.++|+|||.+++.
T Consensus 95 --~~~~D~v~~~~~l~~~--~~~~~~~~l~~~~~~L~~gG~l~~~ 135 (199)
T 2xvm_A 95 --DRQYDFILSTVVLMFL--EAKTIPGLIANMQRCTKPGGYNLIV 135 (199)
T ss_dssp --CCCEEEEEEESCGGGS--CGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred --CCCceEEEEcchhhhC--CHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 5789999999999998 5557899999999999999997764
No 78
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.71 E-value=2.9e-16 Score=119.81 Aligned_cols=123 Identities=17% Similarity=0.184 Sum_probs=96.4
Q ss_pred HHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccc
Q 027388 76 VLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH 155 (224)
Q Consensus 76 ~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 155 (224)
++..+...++.+|||+|||+|.++..++.. ..+++++|+|+.+++.|++++. ..++..++.++++|+.+..
T Consensus 47 ~l~~l~~~~~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~--------~~g~~~~v~~~~~d~~~~~ 117 (204)
T 3njr_A 47 TLAALAPRRGELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNID--------TYGLSPRMRAVQGTAPAAL 117 (204)
T ss_dssp HHHHHCCCTTCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHH--------HTTCTTTEEEEESCTTGGG
T ss_pred HHHhcCCCCCCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHH--------HcCCCCCEEEEeCchhhhc
Confidence 344455677889999999999999998876 6799999999999999999876 2334446999999988732
Q ss_pred cccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCChH---HHHHHhhhccc
Q 027388 156 LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDAN---VIIKKLREEHF 221 (224)
Q Consensus 156 ~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~~---~~~~~~~~~gf 221 (224)
. ....||+|++...+ +.. ++.++.++|+|||++++.....+ .+.+.+++.||
T Consensus 118 ~-----~~~~~D~v~~~~~~--------~~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~g~ 172 (204)
T 3njr_A 118 A-----DLPLPEAVFIGGGG--------SQA-LYDRLWEWLAPGTRIVANAVTLESETLLTQLHARHGG 172 (204)
T ss_dssp T-----TSCCCSEEEECSCC--------CHH-HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHHCS
T ss_pred c-----cCCCCCEEEECCcc--------cHH-HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhCCC
Confidence 2 24579999987643 234 99999999999999999987654 45556666664
No 79
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.71 E-value=7.4e-17 Score=124.57 Aligned_cols=102 Identities=15% Similarity=0.289 Sum_probs=85.5
Q ss_pred cCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCC
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (224)
.++.+|||+|||+|.++..++.. ..+++++|+|+.+++.++++.. .+.++|+.+.... .+
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~~~~~~~~~~~~~~----------------~~~~~d~~~~~~~---~~ 90 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-GTRVSGIEAFPEAAEQAKEKLD----------------HVVLGDIETMDMP---YE 90 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-TCEEEEEESSHHHHHHHHTTSS----------------EEEESCTTTCCCC---SC
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHHhCC----------------cEEEcchhhcCCC---CC
Confidence 46789999999999999998866 5799999999999999987643 5788888763221 14
Q ss_pred CCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCC
Q 027388 163 DAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (224)
Q Consensus 163 ~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~ 208 (224)
.+.||+|++..+++|+ .++..++.++.++|+|||.+++.+++
T Consensus 91 ~~~fD~v~~~~~l~~~----~~~~~~l~~~~~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 91 EEQFDCVIFGDVLEHL----FDPWAVIEKVKPYIKQNGVILASIPN 132 (230)
T ss_dssp TTCEEEEEEESCGGGS----SCHHHHHHHTGGGEEEEEEEEEEEEC
T ss_pred CCccCEEEECChhhhc----CCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 5789999999999998 45679999999999999999998765
No 80
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.71 E-value=1.6e-16 Score=126.59 Aligned_cols=109 Identities=15% Similarity=0.025 Sum_probs=87.6
Q ss_pred HHHHhhcCCCeEEEecCCCchhHHHH-HhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccc
Q 027388 77 LVQLYARRGDVVLDLACGKGGDLIKW-DKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH 155 (224)
Q Consensus 77 ~~~~~~~~~~~iLDiGcG~G~~~~~l-~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 155 (224)
.....+.++.+|||||||+|.++..+ ++...++|+|+|+|+.+++.|++++. ..++ .+++++++|+.+++
T Consensus 115 ~~la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~--------~~gl-~~v~~v~gDa~~l~ 185 (298)
T 3fpf_A 115 AALGRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIE--------GLGV-DGVNVITGDETVID 185 (298)
T ss_dssp HHHTTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHH--------HHTC-CSEEEEESCGGGGG
T ss_pred HHHcCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHH--------hcCC-CCeEEEECchhhCC
Confidence 33446678999999999999776444 43356799999999999999999976 2344 67999999998754
Q ss_pred cccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCC
Q 027388 156 LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (224)
Q Consensus 156 ~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~ 208 (224)
.++||+|++... . .+...+++++.++|||||+|++...+
T Consensus 186 -------d~~FDvV~~~a~---~----~d~~~~l~el~r~LkPGG~Lvv~~~~ 224 (298)
T 3fpf_A 186 -------GLEFDVLMVAAL---A----EPKRRVFRNIHRYVDTETRIIYRTYT 224 (298)
T ss_dssp -------GCCCSEEEECTT---C----SCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred -------CCCcCEEEECCC---c----cCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence 478999998654 2 56789999999999999999997654
No 81
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.71 E-value=2.2e-16 Score=139.64 Aligned_cols=132 Identities=17% Similarity=0.213 Sum_probs=102.6
Q ss_pred hhHHHHHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcC--CeEEEEeCChhHHHHHHHhccCCcccccccccCCCCee
Q 027388 68 KLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKI--GYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPAR 145 (224)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~--~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~ 145 (224)
....++..++..+...++.+|||||||+|.++..++.... .+|+|+|+|+.|++.|++++... .+.+..+ ..++.
T Consensus 705 L~eqRle~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~--lnAkr~g-l~nVe 781 (950)
T 3htx_A 705 LSKQRVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVK--LNKEACN-VKSAT 781 (950)
T ss_dssp HHHHHHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHH--TTTTCSS-CSEEE
T ss_pred HHHHHHHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhc--cchhhcC-CCceE
Confidence 3344555555555556889999999999999999876542 68999999999999999865411 0000112 23699
Q ss_pred EEeccccccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCChH
Q 027388 146 LICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDAN 210 (224)
Q Consensus 146 ~~~~d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~~ 210 (224)
++++|+.+++. ..+.||+|++..+++|+ ..+....+++++.++|+|| .+++++||..
T Consensus 782 fiqGDa~dLp~-----~d~sFDlVV~~eVLeHL--~dp~l~~~L~eI~RvLKPG-~LIISTPN~e 838 (950)
T 3htx_A 782 LYDGSILEFDS-----RLHDVDIGTCLEVIEHM--EEDQACEFGEKVLSLFHPK-LLIVSTPNYE 838 (950)
T ss_dssp EEESCTTSCCT-----TSCSCCEEEEESCGGGS--CHHHHHHHHHHHHHTTCCS-EEEEEECBGG
T ss_pred EEECchHhCCc-----ccCCeeEEEEeCchhhC--ChHHHHHHHHHHHHHcCCC-EEEEEecCch
Confidence 99999998876 56899999999999998 5566678999999999999 9999999863
No 82
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.70 E-value=3e-16 Score=117.95 Aligned_cols=129 Identities=17% Similarity=0.229 Sum_probs=99.4
Q ss_pred HHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCC-CeeEEeccc
Q 027388 73 IKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSF-PARLICGDC 151 (224)
Q Consensus 73 ~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~-~v~~~~~d~ 151 (224)
...++..+...++.+|||+|||+|.++..++.. ..+++++|+++.+++.+++++.. .++.. ++.++++|+
T Consensus 41 ~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~--------~~~~~~~~~~~~~d~ 111 (194)
T 1dus_A 41 TKILVENVVVDKDDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKL--------NNLDNYDIRVVHSDL 111 (194)
T ss_dssp HHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHH--------TTCTTSCEEEEECST
T ss_pred HHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHH--------cCCCccceEEEECch
Confidence 333444445557889999999999999998866 67999999999999999998762 12222 389999998
Q ss_pred cccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCChHH---HHHHhhhc
Q 027388 152 YEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANV---IIKKLREE 219 (224)
Q Consensus 152 ~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~~~---~~~~~~~~ 219 (224)
.+.. ..+.||+|+++.++++ .......+++.+.++|+|||.+++.+++... +.+.+++.
T Consensus 112 ~~~~------~~~~~D~v~~~~~~~~---~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~ 173 (194)
T 1dus_A 112 YENV------KDRKYNKIITNPPIRA---GKEVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAKYMKDV 173 (194)
T ss_dssp TTTC------TTSCEEEEEECCCSTT---CHHHHHHHHHHHHHHEEEEEEEEEEEESTHHHHHHHHHHHHH
T ss_pred hccc------ccCCceEEEECCCccc---chhHHHHHHHHHHHHcCCCCEEEEEECCCCChHHHHHHHHHH
Confidence 7632 3578999999888775 2477889999999999999999999887432 44444443
No 83
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.70 E-value=2.3e-16 Score=118.25 Aligned_cols=113 Identities=13% Similarity=0.123 Sum_probs=85.5
Q ss_pred hhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccccc
Q 027388 81 YARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (224)
...++.+|||+|||+|.++..++.. ..+|+|+|+|+.+++.|++++.. .++ .++++++.+...+...
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~--------~~~-~~v~~~~~~~~~l~~~--- 85 (185)
T 3mti_A 19 VLDDESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSD--------LGI-ENTELILDGHENLDHY--- 85 (185)
T ss_dssp TCCTTCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHH--------HTC-CCEEEEESCGGGGGGT---
T ss_pred hCCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHH--------cCC-CcEEEEeCcHHHHHhh---
Confidence 3467889999999999999999866 67999999999999999999762 233 4689988777664321
Q ss_pred CCCCCeeEEEEcc-cccc----ccCCHHHHHHHHHHHHhhccCCeEEEEEeC
Q 027388 161 ADDAPFDICSCQF-AMHY----SWSTEARARRALANVSALLRPGGTFIGTMP 207 (224)
Q Consensus 161 ~~~~~~D~i~~~~-~l~~----~~~~~~~~~~~l~~~~~~lk~gG~li~~~~ 207 (224)
..++||+|+++. .+.+ +.........++.++.++|||||.+++...
T Consensus 86 -~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 136 (185)
T 3mti_A 86 -VREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY 136 (185)
T ss_dssp -CCSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred -ccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence 357899998873 2221 001235677889999999999999988754
No 84
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.70 E-value=4.6e-17 Score=130.90 Aligned_cols=113 Identities=9% Similarity=-0.024 Sum_probs=79.5
Q ss_pred cCCCeEEEecCCCchhHHHHH----hh-cCCe--EEEEeCChhHHHHHHHhccCCcccccccccCCCCee--EEeccccc
Q 027388 83 RRGDVVLDLACGKGGDLIKWD----KA-KIGY--YVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPAR--LICGDCYE 153 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~----~~-~~~~--~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~--~~~~d~~~ 153 (224)
.++.+|||||||+|.++..++ .. .... ++++|+|+.|++.|++++... ....++. +..+++.+
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~--------~~~~~v~~~~~~~~~~~ 122 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKT--------SNLENVKFAWHKETSSE 122 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTC--------SSCTTEEEEEECSCHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhc--------cCCCcceEEEEecchhh
Confidence 456799999999997665432 22 2333 499999999999999886521 1112343 44555544
Q ss_pred ccccc-ccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeC
Q 027388 154 VHLDK-VLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (224)
Q Consensus 154 ~~~~~-~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~ 207 (224)
++..- ....+++||+|++..+++|+ +++.++++++.++|||||+|++..+
T Consensus 123 ~~~~~~~~~~~~~fD~V~~~~~l~~~----~d~~~~l~~~~r~LkpgG~l~i~~~ 173 (292)
T 2aot_A 123 YQSRMLEKKELQKWDFIHMIQMLYYV----KDIPATLKFFHSLLGTNAKMLIIVV 173 (292)
T ss_dssp HHHHHHTTTCCCCEEEEEEESCGGGC----SCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hhhhhccccCCCceeEEEEeeeeeec----CCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 32000 00135789999999999998 6788999999999999999998643
No 85
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.70 E-value=2.8e-16 Score=118.95 Aligned_cols=115 Identities=21% Similarity=0.311 Sum_probs=90.7
Q ss_pred hhcCCCeEEEecCCCchhHHHHHhh--cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccc
Q 027388 81 YARRGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK 158 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~G~~~~~l~~~--~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 158 (224)
...++.+|||+|||+|.++..++.. ...+++++|+|+.+++.|++++.. .++..++.++++|+.+++..
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~--------~~~~~~v~~~~~d~~~~~~~- 89 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTD--------LNLIDRVTLIKDGHQNMDKY- 89 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHH--------TTCGGGEEEECSCGGGGGGT-
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH--------cCCCCCeEEEECCHHHHhhh-
Confidence 4567889999999999999998875 346999999999999999999762 23345699999998776521
Q ss_pred ccCCCCCeeEEEEcccc-----ccccCCHHHHHHHHHHHHhhccCCeEEEEEeC
Q 027388 159 VLADDAPFDICSCQFAM-----HYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (224)
Q Consensus 159 ~~~~~~~~D~i~~~~~l-----~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~ 207 (224)
..++||+|+++..+ +.+.....+...+++++.++|+|||++++...
T Consensus 90 ---~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 140 (197)
T 3eey_A 90 ---IDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY 140 (197)
T ss_dssp ---CCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ---ccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence 35789999988754 11222445677899999999999999998753
No 86
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.70 E-value=3.6e-16 Score=120.01 Aligned_cols=128 Identities=13% Similarity=0.133 Sum_probs=97.0
Q ss_pred cCCCeEEEecCCCchhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccC
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (224)
.++.+|||||||+|.++..++... ...++|+|+|+.+++.|++++.. .++ .++.++++|+.+++. . .
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~--------~~~-~~v~~~~~d~~~~~~--~-~ 107 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLE--------VGV-PNIKLLWVDGSDLTD--Y-F 107 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHH--------HCC-SSEEEEECCSSCGGG--T-S
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHH--------cCC-CCEEEEeCCHHHHHh--h-c
Confidence 467899999999999999988764 46899999999999999998762 233 469999999987551 0 1
Q ss_pred CCCCeeEEEEccccccccCCHH----HHHHHHHHHHhhccCCeEEEEEeCCh---HHHHHHhhhcccc
Q 027388 162 DDAPFDICSCQFAMHYSWSTEA----RARRALANVSALLRPGGTFIGTMPDA---NVIIKKLREEHFC 222 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~~~~~~~~----~~~~~l~~~~~~lk~gG~li~~~~~~---~~~~~~~~~~gf~ 222 (224)
+.+.||+|+++....+...... ....++..+.++|+|||.|++.+.+. ..+.+.+.+.||.
T Consensus 108 ~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~ 175 (214)
T 1yzh_A 108 EDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYGMK 175 (214)
T ss_dssp CTTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHTCE
T ss_pred CCCCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCCCe
Confidence 4578999999876543200000 13579999999999999999998764 4556777787864
No 87
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.70 E-value=2.9e-16 Score=116.73 Aligned_cols=128 Identities=13% Similarity=0.078 Sum_probs=95.7
Q ss_pred HHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccc
Q 027388 73 IKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDC 151 (224)
Q Consensus 73 ~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~ 151 (224)
...++..+...++.+|||+|||+|.++..++... ..+++++|+|+.+++.|++++.. .++..++ ++++|+
T Consensus 14 ~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~--------~~~~~~~-~~~~d~ 84 (178)
T 3hm2_A 14 RALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAIN--------LGVSDRI-AVQQGA 84 (178)
T ss_dssp HHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHT--------TTCTTSE-EEECCT
T ss_pred HHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHH--------hCCCCCE-EEecch
Confidence 3444555556778899999999999999987653 56899999999999999998762 2344457 888887
Q ss_pred cccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCCh---HHHHHHhhhccc
Q 027388 152 YEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDA---NVIIKKLREEHF 221 (224)
Q Consensus 152 ~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~---~~~~~~~~~~gf 221 (224)
.+ .+.. ..++||+|++..++++ ..+++++.++|+|||.+++..... ..+...+++.|+
T Consensus 85 ~~-~~~~---~~~~~D~i~~~~~~~~--------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~ 145 (178)
T 3hm2_A 85 PR-AFDD---VPDNPDVIFIGGGLTA--------PGVFAAAWKRLPVGGRLVANAVTVESEQMLWALRKQFGG 145 (178)
T ss_dssp TG-GGGG---CCSCCSEEEECC-TTC--------TTHHHHHHHTCCTTCEEEEEECSHHHHHHHHHHHHHHCC
T ss_pred Hh-hhhc---cCCCCCEEEECCcccH--------HHHHHHHHHhcCCCCEEEEEeeccccHHHHHHHHHHcCC
Confidence 54 2210 2378999999988864 568999999999999999987754 345556665553
No 88
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.70 E-value=2.8e-16 Score=119.70 Aligned_cols=118 Identities=17% Similarity=0.099 Sum_probs=96.1
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccC
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (224)
..++.+|||+|||+|.++..++.....+++++|+|+.+++.|++++.. .+... +.++++|+.+..
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~--------~~~~~-v~~~~~d~~~~~------ 122 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAAL--------NGIYD-IALQKTSLLADV------ 122 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHH--------TTCCC-CEEEESSTTTTC------
T ss_pred ccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH--------cCCCc-eEEEeccccccC------
Confidence 457889999999999999998766566999999999999999998762 22233 899999987642
Q ss_pred CCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeC---ChHHHHHHhhhcccc
Q 027388 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP---DANVIIKKLREEHFC 222 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~---~~~~~~~~~~~~gf~ 222 (224)
.+.||+|+++.++++ ...+++++.++|+|||.+++... ....+...++++||.
T Consensus 123 -~~~fD~i~~~~~~~~-------~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~Gf~ 178 (205)
T 3grz_A 123 -DGKFDLIVANILAEI-------LLDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQALAENSFQ 178 (205)
T ss_dssp -CSCEEEEEEESCHHH-------HHHHGGGSGGGEEEEEEEEEEEEEGGGHHHHHHHHHHTTEE
T ss_pred -CCCceEEEECCcHHH-------HHHHHHHHHHhcCCCCEEEEEecCcccHHHHHHHHHHcCCc
Confidence 478999999877643 57889999999999999998643 346788888888875
No 89
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.69 E-value=3.9e-16 Score=120.96 Aligned_cols=128 Identities=19% Similarity=0.172 Sum_probs=97.2
Q ss_pred hhcCCCeEEEecCC-CchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccc
Q 027388 81 YARRGDVVLDLACG-KGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKV 159 (224)
Q Consensus 81 ~~~~~~~iLDiGcG-~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 159 (224)
...++.+|||+||| +|.++..++.....+++|+|+|+.+++.|++++.. .++ ++.++++|+..+..-
T Consensus 52 ~~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~--------~~~--~v~~~~~d~~~~~~~-- 119 (230)
T 3evz_A 52 FLRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIER--------NNS--NVRLVKSNGGIIKGV-- 119 (230)
T ss_dssp TCCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHH--------TTC--CCEEEECSSCSSTTT--
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHH--------hCC--CcEEEeCCchhhhhc--
Confidence 45678999999999 99999988866467999999999999999998762 222 689999997543210
Q ss_pred cCCCCCeeEEEEccccccccC---------------CHHHHHHHHHHHHhhccCCeEEEEEeCCh----HHHHHHhhhcc
Q 027388 160 LADDAPFDICSCQFAMHYSWS---------------TEARARRALANVSALLRPGGTFIGTMPDA----NVIIKKLREEH 220 (224)
Q Consensus 160 ~~~~~~~D~i~~~~~l~~~~~---------------~~~~~~~~l~~~~~~lk~gG~li~~~~~~----~~~~~~~~~~g 220 (224)
..+.||+|+++..+++... .......++..+.++|+|||++++.++.. ..+.+.+.+.|
T Consensus 120 --~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~l~~~g 197 (230)
T 3evz_A 120 --VEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEKLLNVIKERGIKLG 197 (230)
T ss_dssp --CCSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCHHHHHHHHHHHHHTT
T ss_pred --ccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccHhHHHHHHHHHHHcC
Confidence 3579999999866543210 11235789999999999999999977643 56777888888
Q ss_pred cc
Q 027388 221 FC 222 (224)
Q Consensus 221 f~ 222 (224)
|.
T Consensus 198 ~~ 199 (230)
T 3evz_A 198 YS 199 (230)
T ss_dssp CE
T ss_pred Cc
Confidence 74
No 90
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.69 E-value=4.7e-16 Score=116.67 Aligned_cols=124 Identities=22% Similarity=0.235 Sum_probs=98.1
Q ss_pred HHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccc
Q 027388 77 LVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHL 156 (224)
Q Consensus 77 ~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 156 (224)
+......++.+|||+|||+|.++..++... .+++++|+|+.+++.+++++.. .+...++.+.++|+.+ ..
T Consensus 26 ~~~~~~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~--------~~~~~~~~~~~~d~~~-~~ 95 (192)
T 1l3i_A 26 MCLAEPGKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQR--------HGLGDNVTLMEGDAPE-AL 95 (192)
T ss_dssp HHHHCCCTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHH--------TTCCTTEEEEESCHHH-HH
T ss_pred HHhcCCCCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHH--------cCCCcceEEEecCHHH-hc
Confidence 334456778899999999999999887655 7999999999999999998762 2333468999999866 22
Q ss_pred ccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCCh---HHHHHHhhhccc
Q 027388 157 DKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDA---NVIIKKLREEHF 221 (224)
Q Consensus 157 ~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~---~~~~~~~~~~gf 221 (224)
. ..+.||+|++..++++ ...+++.+.++|+|||.+++..++. ..+.+.+++.||
T Consensus 96 ~----~~~~~D~v~~~~~~~~-------~~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~ 152 (192)
T 1l3i_A 96 C----KIPDIDIAVVGGSGGE-------LQEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDLGF 152 (192)
T ss_dssp T----TSCCEEEEEESCCTTC-------HHHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHTTC
T ss_pred c----cCCCCCEEEECCchHH-------HHHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHCCC
Confidence 1 1258999999887654 4688999999999999999988764 456677888887
No 91
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.69 E-value=3.7e-16 Score=123.50 Aligned_cols=130 Identities=16% Similarity=0.150 Sum_probs=99.6
Q ss_pred hc-CCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccccc
Q 027388 82 AR-RGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (224)
Q Consensus 82 ~~-~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (224)
.. ++.+|||+|||+|.++..++......++|+|+++.+++.|++++. ..++..++.++++|+.+....
T Consensus 46 ~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~--------~~~~~~~v~~~~~D~~~~~~~--- 114 (259)
T 3lpm_A 46 LPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVA--------YNQLEDQIEIIEYDLKKITDL--- 114 (259)
T ss_dssp CCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHH--------HTTCTTTEEEECSCGGGGGGT---
T ss_pred CCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHH--------HCCCcccEEEEECcHHHhhhh---
Confidence 44 688999999999999999887665699999999999999999987 345556799999999876521
Q ss_pred CCCCCeeEEEEccccccc----c------------CCHHHHHHHHHHHHhhccCCeEEEEEeCC--hHHHHHHhhhcccc
Q 027388 161 ADDAPFDICSCQFAMHYS----W------------STEARARRALANVSALLRPGGTFIGTMPD--ANVIIKKLREEHFC 222 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~----~------------~~~~~~~~~l~~~~~~lk~gG~li~~~~~--~~~~~~~~~~~gf~ 222 (224)
...++||+|+++..+... . ....+...++..+.++|+|||++++..+. ...+...+++.||.
T Consensus 115 ~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~~~~ 194 (259)
T 3lpm_A 115 IPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPERLLDIIDIMRKYRLE 194 (259)
T ss_dssp SCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTTHHHHHHHHHHTTEE
T ss_pred hccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHHHHHHHHHHHHCCCc
Confidence 136899999997544221 0 01135678999999999999999987653 46777788877764
No 92
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.69 E-value=5.7e-17 Score=134.78 Aligned_cols=120 Identities=15% Similarity=0.213 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEec
Q 027388 70 NNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICG 149 (224)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~ 149 (224)
..+...+.......++.+|||||||+|.++..+++.+..+|+|+|+| .+++.|++++. ..++..+++++++
T Consensus 49 ~~~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~--------~~~~~~~v~~~~~ 119 (376)
T 3r0q_C 49 DAYFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVK--------ANNLDHIVEVIEG 119 (376)
T ss_dssp HHHHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHH--------HTTCTTTEEEEES
T ss_pred HHHHHHHHhccccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHH--------HcCCCCeEEEEEC
Confidence 33444444444556789999999999999999887766699999999 99999999876 3455567999999
Q ss_pred cccccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 150 DCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 150 d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
|+.+++. .++||+|++..+.+++ .....+..++..+.++|+|||++++.
T Consensus 120 d~~~~~~------~~~~D~Iv~~~~~~~l-~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 120 SVEDISL------PEKVDVIISEWMGYFL-LRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp CGGGCCC------SSCEEEEEECCCBTTB-TTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred chhhcCc------CCcceEEEEcChhhcc-cchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 9988775 3789999997654443 33456788999999999999999864
No 93
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.68 E-value=1.1e-15 Score=124.86 Aligned_cols=114 Identities=18% Similarity=0.153 Sum_probs=92.6
Q ss_pred HHHHHhh--cCCCeEEEecCCCchhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccc
Q 027388 76 VLVQLYA--RRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCY 152 (224)
Q Consensus 76 ~~~~~~~--~~~~~iLDiGcG~G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~ 152 (224)
++..... .++.+|||+|||+|.++..++... ..+++++|+| .+++.|++++. ..++..+++++.+|+.
T Consensus 155 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~--------~~~~~~~v~~~~~d~~ 225 (335)
T 2r3s_A 155 IAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENAR--------IQGVASRYHTIAGSAF 225 (335)
T ss_dssp HHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHH--------HHTCGGGEEEEESCTT
T ss_pred HHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHH--------hcCCCcceEEEecccc
Confidence 3434443 677899999999999999988653 4589999999 99999999875 2344456999999998
Q ss_pred ccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEe
Q 027388 153 EVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (224)
Q Consensus 153 ~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~ 206 (224)
+.+. ...||+|++..+++++ +.++...+++++.++|+|||++++..
T Consensus 226 ~~~~------~~~~D~v~~~~~l~~~--~~~~~~~~l~~~~~~L~pgG~l~i~e 271 (335)
T 2r3s_A 226 EVDY------GNDYDLVLLPNFLHHF--DVATCEQLLRKIKTALAVEGKVIVFD 271 (335)
T ss_dssp TSCC------CSCEEEEEEESCGGGS--CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCC------CCCCcEEEEcchhccC--CHHHHHHHHHHHHHhCCCCcEEEEEe
Confidence 7654 3459999999999987 66778999999999999999888753
No 94
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.68 E-value=3.3e-16 Score=118.96 Aligned_cols=106 Identities=15% Similarity=0.137 Sum_probs=87.0
Q ss_pred cCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCC
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (224)
.++ +|||||||+|.++..++.. ..+++++|+|+.+++.+++++.. . ..++.++++|+.+.+. +
T Consensus 29 ~~~-~vLdiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~--------~--~~~~~~~~~d~~~~~~-----~ 91 (202)
T 2kw5_A 29 PQG-KILCLAEGEGRNACFLASL-GYEVTAVDQSSVGLAKAKQLAQE--------K--GVKITTVQSNLADFDI-----V 91 (202)
T ss_dssp CSS-EEEECCCSCTHHHHHHHTT-TCEEEEECSSHHHHHHHHHHHHH--------H--TCCEEEECCBTTTBSC-----C
T ss_pred CCC-CEEEECCCCCHhHHHHHhC-CCeEEEEECCHHHHHHHHHHHHh--------c--CCceEEEEcChhhcCC-----C
Confidence 455 9999999999999988765 45999999999999999998751 1 2258999999987765 4
Q ss_pred CCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCCh
Q 027388 163 DAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDA 209 (224)
Q Consensus 163 ~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~ 209 (224)
.+.||+|++.. .|+ ...+...+++++.++|+|||.+++.+++.
T Consensus 92 ~~~fD~v~~~~--~~~--~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 134 (202)
T 2kw5_A 92 ADAWEGIVSIF--CHL--PSSLRQQLYPKVYQGLKPGGVFILEGFAP 134 (202)
T ss_dssp TTTCSEEEEEC--CCC--CHHHHHHHHHHHHTTCCSSEEEEEEEECT
T ss_pred cCCccEEEEEh--hcC--CHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 68999999854 333 56789999999999999999999986543
No 95
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.68 E-value=1.8e-16 Score=122.76 Aligned_cols=111 Identities=15% Similarity=0.231 Sum_probs=90.4
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccc-cccccccc
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCY-EVHLDKVL 160 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~ 160 (224)
..++.+|||+|||+|.++..++.. ..+++++|+|+.+++.++++.. ++.++++|+. .++.
T Consensus 46 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~--------------~~~~~~~d~~~~~~~---- 106 (226)
T 3m33_A 46 LTPQTRVLEAGCGHGPDAARFGPQ-AARWAAYDFSPELLKLARANAP--------------HADVYEWNGKGELPA---- 106 (226)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHCT--------------TSEEEECCSCSSCCT----
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHhCC--------------CceEEEcchhhccCC----
Confidence 467889999999999999998866 5699999999999999998843 4899999984 4443
Q ss_pred CC-CCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE--eCChHHHHHHhhhcccc
Q 027388 161 AD-DAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT--MPDANVIIKKLREEHFC 222 (224)
Q Consensus 161 ~~-~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~--~~~~~~~~~~~~~~gf~ 222 (224)
. .++||+|++.. ++..+++++.++|||||.|+.. ..+...+...+.++||.
T Consensus 107 -~~~~~fD~v~~~~----------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~Gf~ 160 (226)
T 3m33_A 107 -GLGAPFGLIVSRR----------GPTSVILRLPELAAPDAHFLYVGPRLNVPEVPERLAAVGWD 160 (226)
T ss_dssp -TCCCCEEEEEEES----------CCSGGGGGHHHHEEEEEEEEEEESSSCCTHHHHHHHHTTCE
T ss_pred -cCCCCEEEEEeCC----------CHHHHHHHHHHHcCCCcEEEEeCCcCCHHHHHHHHHHCCCe
Confidence 4 67999999872 2346788999999999999833 22567889999998875
No 96
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.68 E-value=4.7e-16 Score=119.45 Aligned_cols=127 Identities=13% Similarity=0.159 Sum_probs=94.7
Q ss_pred cCCCeEEEecCCCchhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccC
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (224)
.++.+|||||||+|.++..++... ...++|+|+|+.+++.|++++.. .++ .++.++++|+..++. . .
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~--------~~~-~nv~~~~~d~~~l~~--~-~ 104 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKD--------SEA-QNVKLLNIDADTLTD--V-F 104 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHH--------SCC-SSEEEECCCGGGHHH--H-C
T ss_pred CCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHH--------cCC-CCEEEEeCCHHHHHh--h-c
Confidence 467899999999999999988753 46899999999999999998762 222 359999999987541 0 1
Q ss_pred CCCCeeEEEEccccccccCCH----HHHHHHHHHHHhhccCCeEEEEEeCCh---HHHHHHhhhccc
Q 027388 162 DDAPFDICSCQFAMHYSWSTE----ARARRALANVSALLRPGGTFIGTMPDA---NVIIKKLREEHF 221 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~~~~~~~----~~~~~~l~~~~~~lk~gG~li~~~~~~---~~~~~~~~~~gf 221 (224)
+.+.||.|++++...|..... -....++..+.++|+|||.|++.+.+. ..+.+.+.+.||
T Consensus 105 ~~~~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~g~ 171 (213)
T 2fca_A 105 EPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEYGL 171 (213)
T ss_dssp CTTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHHTC
T ss_pred CcCCcCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCC
Confidence 467899998765433220000 013678999999999999999998775 355667777776
No 97
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.68 E-value=4.2e-16 Score=127.90 Aligned_cols=118 Identities=22% Similarity=0.226 Sum_probs=92.5
Q ss_pred HHHHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecc
Q 027388 71 NWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGD 150 (224)
Q Consensus 71 ~~~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d 150 (224)
.|...+.......++.+|||||||+|.++..+++.+..+++|+|+|+ +++.|++++. ..++..+++++++|
T Consensus 51 ~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~--------~~~~~~~i~~~~~d 121 (340)
T 2fyt_A 51 SYRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIR--------LNKLEDTITLIKGK 121 (340)
T ss_dssp HHHHHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHH--------HTTCTTTEEEEESC
T ss_pred HHHHHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHH--------HcCCCCcEEEEEee
Confidence 34444555455677899999999999999988876656899999996 9999998876 23445679999999
Q ss_pred ccccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEE
Q 027388 151 CYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFI 203 (224)
Q Consensus 151 ~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li 203 (224)
+.+++. +.++||+|++..+.+.+ ....++..++..+.++|+|||.++
T Consensus 122 ~~~~~~-----~~~~~D~Ivs~~~~~~l-~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 122 IEEVHL-----PVEKVDVIISEWMGYFL-LFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp TTTSCC-----SCSCEEEEEECCCBTTB-TTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred HHHhcC-----CCCcEEEEEEcCchhhc-cCHHHHHHHHHHHHhhcCCCcEEE
Confidence 988765 45799999987632221 233577889999999999999988
No 98
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.68 E-value=2.4e-16 Score=129.79 Aligned_cols=118 Identities=20% Similarity=0.179 Sum_probs=93.1
Q ss_pred HHHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccc
Q 027388 72 WIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDC 151 (224)
Q Consensus 72 ~~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~ 151 (224)
+...+.......++++|||||||+|.++..+++.+..+|+|+|+| .+++.|++++. ..++..+++++++|+
T Consensus 54 ~~~~i~~~~~~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s-~~l~~a~~~~~--------~~~~~~~v~~~~~d~ 124 (349)
T 3q7e_A 54 YRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECS-SISDYAVKIVK--------ANKLDHVVTIIKGKV 124 (349)
T ss_dssp HHHHHHTCHHHHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECS-THHHHHHHHHH--------HTTCTTTEEEEESCT
T ss_pred HHHHHHhccccCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcH-HHHHHHHHHHH--------HcCCCCcEEEEECcH
Confidence 333343334456889999999999999999887766799999999 49999999876 335556699999999
Q ss_pred cccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEE
Q 027388 152 YEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIG 204 (224)
Q Consensus 152 ~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~ 204 (224)
.+++. +.++||+|++..+.+++ .....+..++..+.++|+|||+++.
T Consensus 125 ~~~~~-----~~~~fD~Iis~~~~~~l-~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 125 EEVEL-----PVEKVDIIISEWMGYCL-FYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp TTCCC-----SSSCEEEEEECCCBBTB-TBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred HHccC-----CCCceEEEEEccccccc-cCchhHHHHHHHHHHhCCCCCEEcc
Confidence 98876 46899999997654332 2335678899999999999999874
No 99
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.67 E-value=2.3e-16 Score=121.06 Aligned_cols=102 Identities=21% Similarity=0.278 Sum_probs=85.2
Q ss_pred cCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCC
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (224)
.++.+|||||||+|.++..++ .+++++|+|+. . +.+.++|+.+++. +
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~----~~v~~~D~s~~---------~---------------~~~~~~d~~~~~~-----~ 112 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR----NPVHCFDLASL---------D---------------PRVTVCDMAQVPL-----E 112 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC----SCEEEEESSCS---------S---------------TTEEESCTTSCSC-----C
T ss_pred CCCCeEEEECCcCCHHHHHhh----ccEEEEeCCCC---------C---------------ceEEEeccccCCC-----C
Confidence 567899999999999887662 68999999996 2 6788899887665 5
Q ss_pred CCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeC-----ChHHHHHHhhhcccc
Q 027388 163 DAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP-----DANVIIKKLREEHFC 222 (224)
Q Consensus 163 ~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~-----~~~~~~~~~~~~gf~ 222 (224)
.++||+|++..++|+ .++..+++++.++|+|||.+++..+ ....+...++++||.
T Consensus 113 ~~~fD~v~~~~~l~~-----~~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~ 172 (215)
T 2zfu_A 113 DESVDVAVFCLSLMG-----TNIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFK 172 (215)
T ss_dssp TTCEEEEEEESCCCS-----SCHHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEE
T ss_pred CCCEeEEEEehhccc-----cCHHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCE
Confidence 678999999999963 4678999999999999999999754 447888999999985
No 100
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.67 E-value=8e-17 Score=135.61 Aligned_cols=118 Identities=16% Similarity=0.212 Sum_probs=89.4
Q ss_pred HHHHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCe-eEEec
Q 027388 71 NWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPA-RLICG 149 (224)
Q Consensus 71 ~~~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v-~~~~~ 149 (224)
.+...++......++.+|||||||+|.++..++... .+++|+|+|+.+++.|+++.. .... .+...
T Consensus 94 ~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g-~~v~gvD~s~~~~~~a~~~~~------------~~~~~~~~~~ 160 (416)
T 4e2x_A 94 MLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAG-VRHLGFEPSSGVAAKAREKGI------------RVRTDFFEKA 160 (416)
T ss_dssp HHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTT-CEEEEECCCHHHHHHHHTTTC------------CEECSCCSHH
T ss_pred HHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcC-CcEEEECCCHHHHHHHHHcCC------------Ccceeeechh
Confidence 334444444455678899999999999999987654 499999999999999987622 1111 12233
Q ss_pred cccccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCChH
Q 027388 150 DCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDAN 210 (224)
Q Consensus 150 d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~~ 210 (224)
+...++. ..++||+|++..+++|+ +++..+++++.++|+|||++++.+++..
T Consensus 161 ~~~~l~~-----~~~~fD~I~~~~vl~h~----~d~~~~l~~~~r~LkpgG~l~i~~~~~~ 212 (416)
T 4e2x_A 161 TADDVRR-----TEGPANVIYAANTLCHI----PYVQSVLEGVDALLAPDGVFVFEDPYLG 212 (416)
T ss_dssp HHHHHHH-----HHCCEEEEEEESCGGGC----TTHHHHHHHHHHHEEEEEEEEEEEECHH
T ss_pred hHhhccc-----CCCCEEEEEECChHHhc----CCHHHHHHHHHHHcCCCeEEEEEeCChH
Confidence 3433433 35899999999999998 5899999999999999999999877643
No 101
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.67 E-value=9.6e-16 Score=127.21 Aligned_cols=109 Identities=20% Similarity=0.229 Sum_probs=89.1
Q ss_pred hhcCCCeEEEecCCCchhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccc
Q 027388 81 YARRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKV 159 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 159 (224)
...++.+|||||||+|.++..++... ..+++++|+ +.+++.+++++. ..++..+++++.+|+.+ +.
T Consensus 179 ~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~--------~~~~~~~v~~~~~d~~~-~~--- 245 (374)
T 1qzz_A 179 DWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFA--------DAGLADRVTVAEGDFFK-PL--- 245 (374)
T ss_dssp CCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHH--------HTTCTTTEEEEECCTTS-CC---
T ss_pred CCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHH--------hcCCCCceEEEeCCCCC-cC---
Confidence 34567899999999999999988764 458999999 999999999876 23445579999999865 22
Q ss_pred cCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeC
Q 027388 160 LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (224)
Q Consensus 160 ~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~ 207 (224)
+..||+|++..++|++ +..+...+++++.++|+|||+|++...
T Consensus 246 ---~~~~D~v~~~~vl~~~--~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 246 ---PVTADVVLLSFVLLNW--SDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp ---SCCEEEEEEESCGGGS--CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ---CCCCCEEEEeccccCC--CHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 2349999999999987 556667999999999999999887644
No 102
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.67 E-value=3.9e-16 Score=118.85 Aligned_cols=110 Identities=15% Similarity=0.133 Sum_probs=85.8
Q ss_pred CCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCC-CCeeEEeccccccccccccCC
Q 027388 84 RGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFS-FPARLICGDCYEVHLDKVLAD 162 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~ 162 (224)
++.+|||+|||+|.++..++.....+|+++|+|+.+++.|++++.. .++. .++.++++|+.+.... . .
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~--------~~~~~~~v~~~~~d~~~~~~~-~--~ 121 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQT--------LKCSSEQAEVINQSSLDFLKQ-P--Q 121 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHH--------TTCCTTTEEEECSCHHHHTTS-C--C
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHH--------hCCCccceEEEECCHHHHHHh-h--c
Confidence 6789999999999999987766667899999999999999998762 2232 4689999998765321 0 2
Q ss_pred CCC-eeEEEEccccccccCCHHHHHHHHHHH--HhhccCCeEEEEEeCCh
Q 027388 163 DAP-FDICSCQFAMHYSWSTEARARRALANV--SALLRPGGTFIGTMPDA 209 (224)
Q Consensus 163 ~~~-~D~i~~~~~l~~~~~~~~~~~~~l~~~--~~~lk~gG~li~~~~~~ 209 (224)
.++ ||+|++...++ . .+...++..+ .++|+|||.+++.+...
T Consensus 122 ~~~~fD~I~~~~~~~-~----~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 122 NQPHFDVVFLDPPFH-F----NLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp SSCCEEEEEECCCSS-S----CHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred cCCCCCEEEECCCCC-C----ccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 467 99999987744 2 4567788888 67899999999986554
No 103
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.67 E-value=3e-16 Score=129.20 Aligned_cols=120 Identities=17% Similarity=0.210 Sum_probs=95.2
Q ss_pred HHHHHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEec
Q 027388 70 NNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICG 149 (224)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~ 149 (224)
..+...++..+...++.+|||||||+|.++..+++.+..+|+++|+|+ +++.|++++. ..++..+++++++
T Consensus 36 ~~y~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~--------~~~l~~~v~~~~~ 106 (348)
T 2y1w_A 36 GTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVK--------SNNLTDRIVVIPG 106 (348)
T ss_dssp HHHHHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHH--------HTTCTTTEEEEES
T ss_pred HHHHHHHHhccccCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHH--------HcCCCCcEEEEEc
Confidence 345555666566668899999999999999988876667999999996 8899988876 2345567999999
Q ss_pred cccccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEe
Q 027388 150 DCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (224)
Q Consensus 150 d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~ 206 (224)
|+.+++. .++||+|++..+++++ ..+.....+..+.++|+|||.+++..
T Consensus 107 d~~~~~~------~~~~D~Ivs~~~~~~~--~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 107 KVEEVSL------PEQVDIIISEPMGYML--FNERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp CTTTCCC------SSCEEEEEECCCBTTB--TTTSHHHHHHHGGGGEEEEEEEESCE
T ss_pred chhhCCC------CCceeEEEEeCchhcC--ChHHHHHHHHHHHhhcCCCeEEEEec
Confidence 9988764 3689999999887766 33446677888999999999998653
No 104
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.67 E-value=4.1e-16 Score=116.04 Aligned_cols=111 Identities=14% Similarity=0.043 Sum_probs=87.1
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccc-cccccc
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV-HLDKVL 160 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~ 160 (224)
..++.+|||+|||+|.++..++.....+++++|+|+.+++.|++++.. .++..++.++++|+.+. +.
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~--------~~~~~~~~~~~~d~~~~~~~---- 96 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIM--------TKAENRFTLLKMEAERAIDC---- 96 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHT--------TTCGGGEEEECSCHHHHHHH----
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHH--------cCCCCceEEEECcHHHhHHh----
Confidence 356789999999999999988876557999999999999999998862 23344689999998763 22
Q ss_pred CCCCCeeEEEEccccccccCCHHHHHHHHHHHH--hhccCCeEEEEEeCChH
Q 027388 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVS--ALLRPGGTFIGTMPDAN 210 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~--~~lk~gG~li~~~~~~~ 210 (224)
..+.||+|+++..++. .....++..+. ++|+|||++++.++...
T Consensus 97 -~~~~fD~i~~~~~~~~-----~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 97 -LTGRFDLVFLDPPYAK-----ETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp -BCSCEEEEEECCSSHH-----HHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred -hcCCCCEEEECCCCCc-----chHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 2467999999876532 44566777776 99999999999876544
No 105
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.66 E-value=3e-15 Score=123.90 Aligned_cols=106 Identities=12% Similarity=0.022 Sum_probs=89.7
Q ss_pred cCCCeEEEecCCCchhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccc--cccc
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH--LDKV 159 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~ 159 (224)
....+|||||||+|.++..+++.. ..+++++|+ +.+++.|++++.. .++..+++++.+|+.+.. .
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~--------~~~~~~v~~~~~d~~~~~~~~--- 245 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAG--------LSGSERIHGHGANLLDRDVPF--- 245 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTT--------CTTGGGEEEEECCCCSSSCCC---
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHh--------cCcccceEEEEccccccCCCC---
Confidence 567899999999999999988653 458999999 9999999998762 344457999999997652 3
Q ss_pred cCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 160 LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 160 ~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
+++||+|++..++|++ +.++...+++++++.|+|||+|++.
T Consensus 246 ---p~~~D~v~~~~vlh~~--~~~~~~~~l~~~~~~L~pgG~l~i~ 286 (363)
T 3dp7_A 246 ---PTGFDAVWMSQFLDCF--SEEEVISILTRVAQSIGKDSKVYIM 286 (363)
T ss_dssp ---CCCCSEEEEESCSTTS--CHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred ---CCCcCEEEEechhhhC--CHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 3689999999999987 6677889999999999999999885
No 106
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.66 E-value=1.1e-15 Score=116.77 Aligned_cols=110 Identities=16% Similarity=0.154 Sum_probs=89.2
Q ss_pred HHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccc
Q 027388 74 KSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYE 153 (224)
Q Consensus 74 ~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~ 153 (224)
..++..+...++.+|||+|||+|.++..++.. ..+++++|+|+.+++.+++++.. .++. +++++++|+.+
T Consensus 67 ~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~--------~~~~-~v~~~~~d~~~ 136 (210)
T 3lbf_A 67 ARMTELLELTPQSRVLEIGTGSGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKN--------LDLH-NVSTRHGDGWQ 136 (210)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHH--------TTCC-SEEEEESCGGG
T ss_pred HHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHH--------cCCC-ceEEEECCccc
Confidence 33444455678899999999999999988866 67999999999999999998762 2223 58999999877
Q ss_pred cccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCC
Q 027388 154 VHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (224)
Q Consensus 154 ~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~ 208 (224)
... ..++||+|++..+++++. ..+.+.|+|||++++..++
T Consensus 137 ~~~-----~~~~~D~i~~~~~~~~~~----------~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 137 GWQ-----ARAPFDAIIVTAAPPEIP----------TALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CCG-----GGCCEEEEEESSBCSSCC----------THHHHTEEEEEEEEEEECS
T ss_pred CCc-----cCCCccEEEEccchhhhh----------HHHHHhcccCcEEEEEEcC
Confidence 543 357899999999999872 1588999999999998876
No 107
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.66 E-value=6.5e-16 Score=119.07 Aligned_cols=115 Identities=20% Similarity=0.331 Sum_probs=87.6
Q ss_pred cCCCeEEEecCCCchhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccc-cccccc
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV-HLDKVL 160 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~ 160 (224)
..+.+|||||||+|.++..++... ...++|||+|+.+++.|++++.. .++ .++.++++|+.++ +. .
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~--------~~l-~nv~~~~~Da~~~l~~---~ 100 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHE--------EGL-SNLRVMCHDAVEVLHK---M 100 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHH--------TTC-SSEEEECSCHHHHHHH---H
T ss_pred CCCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHH--------hCC-CcEEEEECCHHHHHHH---H
Confidence 467899999999999999998654 45799999999999999998762 222 2599999998774 20 0
Q ss_pred CCCCCeeEEEEccccccccCCHHHH------HHHHHHHHhhccCCeEEEEEeCChHH
Q 027388 161 ADDAPFDICSCQFAMHYSWSTEARA------RRALANVSALLRPGGTFIGTMPDANV 211 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~~~~~~~~------~~~l~~~~~~lk~gG~li~~~~~~~~ 211 (224)
.+.++||.|++++...|. ..... ..++..+.++|||||+|++.+.+...
T Consensus 101 ~~~~~~d~v~~~~~~p~~--~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~~ 155 (218)
T 3dxy_A 101 IPDNSLRMVQLFFPDPWH--KARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPY 155 (218)
T ss_dssp SCTTCEEEEEEESCCCCC--SGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHHH
T ss_pred cCCCChheEEEeCCCCcc--chhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHHH
Confidence 146899999988654432 11111 25999999999999999999987643
No 108
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.66 E-value=2.4e-15 Score=119.81 Aligned_cols=126 Identities=14% Similarity=0.030 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHh-hcCCCeEEEecCCC---chhHHHHHhh-cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCe
Q 027388 70 NNWIKSVLVQLY-ARRGDVVLDLACGK---GGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPA 144 (224)
Q Consensus 70 ~~~~~~~~~~~~-~~~~~~iLDiGcG~---G~~~~~l~~~-~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v 144 (224)
..|+.+++..+. .....+|||||||+ |.++..+... ...+|+++|+|+.|++.|++++.. ..++
T Consensus 62 ~~~~~~~~~~l~~~~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~-----------~~~v 130 (274)
T 2qe6_A 62 RKVLVRGVRFLAGEAGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK-----------DPNT 130 (274)
T ss_dssp HHHHHHHHHHHHTTTCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT-----------CTTE
T ss_pred hHHHHHHHHHHhhccCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC-----------CCCe
Confidence 445555555443 23457999999999 9776655443 346899999999999999998751 2468
Q ss_pred eEEeccccccccc----c--ccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCC
Q 027388 145 RLICGDCYEVHLD----K--VLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (224)
Q Consensus 145 ~~~~~d~~~~~~~----~--~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~ 208 (224)
.++++|+.+.... . ......+||+|++..++||+ +..++..+++++.++|+|||+|++....
T Consensus 131 ~~~~~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~--~d~~~~~~l~~~~~~L~pGG~l~i~~~~ 198 (274)
T 2qe6_A 131 AVFTADVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYL--SPDVVDRVVGAYRDALAPGSYLFMTSLV 198 (274)
T ss_dssp EEEECCTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGS--CTTTHHHHHHHHHHHSCTTCEEEEEEEB
T ss_pred EEEEeeCCCchhhhccchhhccCCCCCCEEEEEechhhhC--CcHHHHHHHHHHHHhCCCCcEEEEEEec
Confidence 9999999764210 0 00123589999999999998 3336899999999999999999988654
No 109
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.65 E-value=1.1e-15 Score=124.80 Aligned_cols=119 Identities=21% Similarity=0.252 Sum_probs=92.9
Q ss_pred HHHHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecc
Q 027388 71 NWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGD 150 (224)
Q Consensus 71 ~~~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d 150 (224)
.|...+.......++.+|||||||+|.++..+++.+..+++|+|+| .+++.|++++. ..++..+++++++|
T Consensus 25 ~y~~ai~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~--------~~~~~~~i~~~~~d 95 (328)
T 1g6q_1 25 SYRNAIIQNKDLFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVE--------LNGFSDKITLLRGK 95 (328)
T ss_dssp HHHHHHHHHHHHHTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHH--------HTTCTTTEEEEESC
T ss_pred HHHHHHHhhHhhcCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHH--------HcCCCCCEEEEECc
Confidence 3444454455556889999999999999998887666699999999 59999998876 23555679999999
Q ss_pred ccccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEE
Q 027388 151 CYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIG 204 (224)
Q Consensus 151 ~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~ 204 (224)
+.+++. +.++||+|++..+.+++ .....+..++..+.++|+|||.++.
T Consensus 96 ~~~~~~-----~~~~~D~Ivs~~~~~~l-~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 96 LEDVHL-----PFPKVDIIISEWMGYFL-LYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp TTTSCC-----SSSCEEEEEECCCBTTB-STTCCHHHHHHHHHHHEEEEEEEES
T ss_pred hhhccC-----CCCcccEEEEeCchhhc-ccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 988765 45789999998654432 2335577899999999999999973
No 110
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.65 E-value=3.7e-15 Score=123.15 Aligned_cols=110 Identities=15% Similarity=0.036 Sum_probs=90.0
Q ss_pred HHhhcCCCeEEEecCCCchhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccc
Q 027388 79 QLYARRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD 157 (224)
Q Consensus 79 ~~~~~~~~~iLDiGcG~G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 157 (224)
.....++.+|||||||+|.++..+++.. ..+++++|+ +.+++.+++++. ..++..+++++.+|+.+.+.
T Consensus 185 ~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~--------~~~~~~~v~~~~~d~~~~~~- 254 (359)
T 1x19_A 185 EAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAA--------EKGVADRMRGIAVDIYKESY- 254 (359)
T ss_dssp HCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHH--------HTTCTTTEEEEECCTTTSCC-
T ss_pred hcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHH--------hcCCCCCEEEEeCccccCCC-
Confidence 3334567899999999999999988754 458999999 999999999876 23445569999999987654
Q ss_pred cccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEe
Q 027388 158 KVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (224)
Q Consensus 158 ~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~ 206 (224)
..+|+|++..+++++ +.++...+++++.++|+|||+|++..
T Consensus 255 ------~~~D~v~~~~vlh~~--~d~~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 255 ------PEADAVLFCRILYSA--NEQLSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp ------CCCSEEEEESCGGGS--CHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred ------CCCCEEEEechhccC--CHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 234999999999987 55668999999999999999997653
No 111
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.65 E-value=2.1e-15 Score=112.32 Aligned_cols=120 Identities=18% Similarity=0.295 Sum_probs=94.4
Q ss_pred HHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccc
Q 027388 76 VLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH 155 (224)
Q Consensus 76 ~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 155 (224)
++..+...++.+|||+|||+|.++..++. ...+++++|+|+.+++.+++++.. .++ .++.++++|+.+ +
T Consensus 27 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~--------~~~-~~~~~~~~d~~~-~ 95 (183)
T 2yxd_A 27 SIGKLNLNKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAK--------FNI-KNCQIIKGRAED-V 95 (183)
T ss_dssp HHHHHCCCTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHH--------TTC-CSEEEEESCHHH-H
T ss_pred HHHHcCCCCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHH--------cCC-CcEEEEECCccc-c
Confidence 34444556788999999999999999886 667999999999999999998762 222 358999999876 4
Q ss_pred cccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCChH---HHHHHhhhccc
Q 027388 156 LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDAN---VIIKKLREEHF 221 (224)
Q Consensus 156 ~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~~---~~~~~~~~~gf 221 (224)
. +.+.||+|++..+ + +...++..+.++ |||.+++..++.. .+.+.+++.||
T Consensus 96 ~-----~~~~~D~i~~~~~-~-------~~~~~l~~~~~~--~gG~l~~~~~~~~~~~~~~~~l~~~g~ 149 (183)
T 2yxd_A 96 L-----DKLEFNKAFIGGT-K-------NIEKIIEILDKK--KINHIVANTIVLENAAKIINEFESRGY 149 (183)
T ss_dssp G-----GGCCCSEEEECSC-S-------CHHHHHHHHHHT--TCCEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred c-----cCCCCcEEEECCc-c-------cHHHHHHHHhhC--CCCEEEEEecccccHHHHHHHHHHcCC
Confidence 3 3478999999887 2 246788888888 9999999988754 56667777775
No 112
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.65 E-value=2e-15 Score=124.82 Aligned_cols=128 Identities=13% Similarity=0.095 Sum_probs=94.1
Q ss_pred hHHHHHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccC-CCCeeE
Q 027388 69 LNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKF-SFPARL 146 (224)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~-~~~v~~ 146 (224)
....+..++..+.+.++.+|||||||+|.++..++... ..+++|||+|+.+++.|++....... +.+..++ ..++.+
T Consensus 158 ~~~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frk-r~~~~Gl~~~rVef 236 (438)
T 3uwp_A 158 SFDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRK-WMKWYGKKHAEYTL 236 (438)
T ss_dssp HHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHH-HHHHHTBCCCEEEE
T ss_pred CHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHH-HHHHhCCCCCCeEE
Confidence 34556666777777889999999999999999987653 34699999999999999875420000 0001122 246999
Q ss_pred EeccccccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 147 ICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 147 ~~~d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
+++|+.+.+.... -..||+|+++..++ . ++....|.++.+.|||||.|++.
T Consensus 237 i~GD~~~lp~~d~---~~~aDVVf~Nn~~F-~----pdl~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 237 ERGDFLSEEWRER---IANTSVIFVNNFAF-G----PEVDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp EECCTTSHHHHHH---HHTCSEEEECCTTC-C----HHHHHHHHHHHTTSCTTCEEEES
T ss_pred EECcccCCccccc---cCCccEEEEccccc-C----chHHHHHHHHHHcCCCCcEEEEe
Confidence 9999988775211 14799999987653 2 67888899999999999999975
No 113
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.65 E-value=3e-15 Score=123.23 Aligned_cols=115 Identities=17% Similarity=0.215 Sum_probs=92.4
Q ss_pred HHHHHhhcC-CCeEEEecCCCchhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccc
Q 027388 76 VLVQLYARR-GDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYE 153 (224)
Q Consensus 76 ~~~~~~~~~-~~~iLDiGcG~G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~ 153 (224)
++......+ +.+|||||||+|.++..+++.. ..+++++|+ +.+++.+++++. ..++..+++++.+|+.+
T Consensus 170 ~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~--------~~~~~~~v~~~~~d~~~ 240 (352)
T 3mcz_A 170 VVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIH--------AHDLGGRVEFFEKNLLD 240 (352)
T ss_dssp HHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHH--------HTTCGGGEEEEECCTTC
T ss_pred HHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHH--------hcCCCCceEEEeCCccc
Confidence 333334455 7899999999999999988653 458999999 889999998876 23445579999999987
Q ss_pred cccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 154 VHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 154 ~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
.+.. ..+.||+|++..++|++ +.++...+++++.+.|+|||+|++.
T Consensus 241 ~~~~----~~~~~D~v~~~~vlh~~--~~~~~~~~l~~~~~~L~pgG~l~i~ 286 (352)
T 3mcz_A 241 ARNF----EGGAADVVMLNDCLHYF--DAREAREVIGHAAGLVKPGGALLIL 286 (352)
T ss_dssp GGGG----TTCCEEEEEEESCGGGS--CHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred Cccc----CCCCccEEEEecccccC--CHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 6510 14579999999999998 6667899999999999999999885
No 114
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.64 E-value=5.4e-15 Score=122.61 Aligned_cols=106 Identities=12% Similarity=0.154 Sum_probs=88.7
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccccc
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (224)
..+..+|||||||+|.++..+++.. ..+++++|+ +.+++.+++++. ..++..++++..+|+. .+.
T Consensus 200 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~--------~~~l~~~v~~~~~d~~-~~~---- 265 (369)
T 3gwz_A 200 FSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLT--------GRGLADRCEILPGDFF-ETI---- 265 (369)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHH--------HTTCTTTEEEEECCTT-TCC----
T ss_pred CccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhh--------hcCcCCceEEeccCCC-CCC----
Confidence 3567899999999999999988763 458999999 999999999876 2345567999999987 333
Q ss_pred CCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
+ ..||+|++..++|++ +.+....+++++.+.|+|||+|++.
T Consensus 266 -p-~~~D~v~~~~vlh~~--~d~~~~~~L~~~~~~L~pgG~l~i~ 306 (369)
T 3gwz_A 266 -P-DGADVYLIKHVLHDW--DDDDVVRILRRIATAMKPDSRLLVI 306 (369)
T ss_dssp -C-SSCSEEEEESCGGGS--CHHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred -C-CCceEEEhhhhhccC--CHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 2 389999999999988 6666779999999999999999885
No 115
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.64 E-value=4.6e-15 Score=121.25 Aligned_cols=105 Identities=19% Similarity=0.155 Sum_probs=87.9
Q ss_pred CCCeEEEecCCCchhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCC
Q 027388 84 RGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (224)
+..+|||||||+|.++..+++.. ..+++++|+ +.+++.+++++. ..++..++++..+|+. .+. +
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~--------~~~~~~~v~~~~~d~~-~~~-----p 233 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFL--------DTGLSGRAQVVVGSFF-DPL-----P 233 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHH--------HTTCTTTEEEEECCTT-SCC-----C
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhh--------hcCcCcCeEEecCCCC-CCC-----C
Confidence 46799999999999999988653 458999999 999999998876 2345567999999987 333 2
Q ss_pred CCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEe
Q 027388 163 DAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (224)
Q Consensus 163 ~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~ 206 (224)
.+||+|++..++|++ +.++...+++++++.|+|||+|++..
T Consensus 234 -~~~D~v~~~~vlh~~--~~~~~~~~l~~~~~~L~pgG~l~i~e 274 (332)
T 3i53_A 234 -AGAGGYVLSAVLHDW--DDLSAVAILRRCAEAAGSGGVVLVIE 274 (332)
T ss_dssp -CSCSEEEEESCGGGS--CHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred -CCCcEEEEehhhccC--CHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 389999999999998 56668999999999999999998864
No 116
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.63 E-value=3.5e-15 Score=115.36 Aligned_cols=125 Identities=20% Similarity=0.141 Sum_probs=94.6
Q ss_pred HHhhcCCCeEEEecCCCchhHHHHHhh--cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccc
Q 027388 79 QLYARRGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHL 156 (224)
Q Consensus 79 ~~~~~~~~~iLDiGcG~G~~~~~l~~~--~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 156 (224)
.+.++++.+|||+|||+|.++..++.. ..++|+++|+|+.|++.+++++.. ..++..+.+|......
T Consensus 72 ~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~-----------~~ni~~V~~d~~~p~~ 140 (233)
T 4df3_A 72 ELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRD-----------RRNIFPILGDARFPEK 140 (233)
T ss_dssp CCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTT-----------CTTEEEEESCTTCGGG
T ss_pred hcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHh-----------hcCeeEEEEeccCccc
Confidence 345789999999999999999999864 457999999999999999988762 2368888888765332
Q ss_pred ccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEe---------CC---hHHHHHHhhhcccc
Q 027388 157 DKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM---------PD---ANVIIKKLREEHFC 222 (224)
Q Consensus 157 ~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~---------~~---~~~~~~~~~~~gf~ 222 (224)
. ....+.+|+|++....+ .+...++.++.+.|||||.+++.. +. .....+.|+++||.
T Consensus 141 ~--~~~~~~vDvVf~d~~~~------~~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF~ 210 (233)
T 4df3_A 141 Y--RHLVEGVDGLYADVAQP------EQAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGLE 210 (233)
T ss_dssp G--TTTCCCEEEEEECCCCT------THHHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTCC
T ss_pred c--ccccceEEEEEEeccCC------hhHHHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCCCE
Confidence 1 11457899998754322 467789999999999999999862 11 12345667788885
No 117
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.63 E-value=4.9e-15 Score=123.08 Aligned_cols=111 Identities=24% Similarity=0.283 Sum_probs=90.9
Q ss_pred cCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCC
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (224)
.++.+|||+|||+|.++..++.. ..+|+++|+|+.+++.|++++... ...++++++|+.+... .
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~-g~~V~gvDis~~al~~A~~n~~~~----------~~~v~~~~~D~~~~~~-----~ 295 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARM-GAEVVGVEDDLASVLSLQKGLEAN----------ALKAQALHSDVDEALT-----E 295 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHT-TCEEEEEESBHHHHHHHHHHHHHT----------TCCCEEEECSTTTTSC-----T
T ss_pred CCCCEEEEEeeeCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHc----------CCCeEEEEcchhhccc-----c
Confidence 36789999999999999999866 459999999999999999997621 2238899999987654 3
Q ss_pred CCCeeEEEEcccccccc-CCHHHHHHHHHHHHhhccCCeEEEEEeCCh
Q 027388 163 DAPFDICSCQFAMHYSW-STEARARRALANVSALLRPGGTFIGTMPDA 209 (224)
Q Consensus 163 ~~~~D~i~~~~~l~~~~-~~~~~~~~~l~~~~~~lk~gG~li~~~~~~ 209 (224)
.++||+|+++..+++.. ....+...++.++.++|+|||.+++.....
T Consensus 296 ~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~ 343 (381)
T 3dmg_A 296 EARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPF 343 (381)
T ss_dssp TCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTT
T ss_pred CCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCC
Confidence 57999999998888621 023778899999999999999999986544
No 118
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.63 E-value=3.6e-15 Score=116.46 Aligned_cols=121 Identities=12% Similarity=0.041 Sum_probs=91.4
Q ss_pred cCCCeEEEecCCCchhHHHHHhh-cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccC
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~-~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (224)
.++.+|||||||+|..+..++.. ...+++++|+|+.+++.|++++.. .++. +++++++|+.+++....
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~--------~~~~-~v~~~~~d~~~~~~~~~-- 137 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEA--------LQLE-NTTFCHDRAETFGQRKD-- 137 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHH--------HTCS-SEEEEESCHHHHTTCTT--
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHH--------cCCC-CEEEEeccHHHhccccc--
Confidence 46789999999999999988753 446899999999999999998762 2333 49999999877653100
Q ss_pred CCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCC--h---HHHHHHhhhcccc
Q 027388 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD--A---NVIIKKLREEHFC 222 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~--~---~~~~~~~~~~gf~ 222 (224)
..++||+|++..+ .++..++..+.++|+|||.+++.... . ..+...+++.||.
T Consensus 138 ~~~~fD~V~~~~~--------~~~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~ 195 (240)
T 1xdz_A 138 VRESYDIVTARAV--------ARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGE 195 (240)
T ss_dssp TTTCEEEEEEECC--------SCHHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTEE
T ss_pred ccCCccEEEEecc--------CCHHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCCe
Confidence 1478999998763 34678999999999999999886432 1 2355566677763
No 119
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.63 E-value=2.1e-15 Score=114.81 Aligned_cols=108 Identities=10% Similarity=0.010 Sum_probs=83.6
Q ss_pred CCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCCC
Q 027388 84 RGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADD 163 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 163 (224)
++.+|||+|||+|.++..++.....+|+++|+|+.+++.|++++.. .++ .+++++++|+.+.... ..
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~--------~~~-~~v~~~~~D~~~~~~~----~~ 120 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLAT--------LKA-GNARVVNSNAMSFLAQ----KG 120 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHH--------TTC-CSEEEECSCHHHHHSS----CC
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHH--------cCC-CcEEEEECCHHHHHhh----cC
Confidence 6789999999999999987766666999999999999999998762 222 4689999998763211 35
Q ss_pred CCeeEEEEccccccccCCHHHHHHHHHHHHh--hccCCeEEEEEeCCh
Q 027388 164 APFDICSCQFAMHYSWSTEARARRALANVSA--LLRPGGTFIGTMPDA 209 (224)
Q Consensus 164 ~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~--~lk~gG~li~~~~~~ 209 (224)
+.||+|++...++ . .....++..+.+ +|+|||++++.+...
T Consensus 121 ~~fD~V~~~~p~~-~----~~~~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 121 TPHNIVFVDPPFR-R----GLLEETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp CCEEEEEECCSSS-T----TTHHHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred CCCCEEEECCCCC-C----CcHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 6899999987743 1 345567777765 599999999986543
No 120
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.63 E-value=8.7e-16 Score=115.02 Aligned_cols=114 Identities=14% Similarity=0.095 Sum_probs=85.6
Q ss_pred cCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCC
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (224)
.++.+|||+|||+|.++..++.....+++++|+|+.+++.|++++. ..++..++.++++|+.+.... ....
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~--------~~~~~~~~~~~~~d~~~~~~~-~~~~ 113 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIA--------ITKEPEKFEVRKMDANRALEQ-FYEE 113 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHH--------HHTCGGGEEEEESCHHHHHHH-HHHT
T ss_pred cCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHH--------HhCCCcceEEEECcHHHHHHH-HHhc
Confidence 4678999999999999998876555799999999999999999876 223344689999998764210 0002
Q ss_pred CCCeeEEEEccccccccCCHHHHHHHHHHH--HhhccCCeEEEEEeCChH
Q 027388 163 DAPFDICSCQFAMHYSWSTEARARRALANV--SALLRPGGTFIGTMPDAN 210 (224)
Q Consensus 163 ~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~--~~~lk~gG~li~~~~~~~ 210 (224)
.+.||+|+++..++. ......+..+ .++|+|||++++.++...
T Consensus 114 ~~~fD~i~~~~~~~~-----~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 114 KLQFDLVLLDPPYAK-----QEIVSQLEKMLERQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp TCCEEEEEECCCGGG-----CCHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred CCCCCEEEECCCCCc-----hhHHHHHHHHHHhcccCCCCEEEEEeCCcc
Confidence 578999999877542 1234455555 889999999999877654
No 121
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.63 E-value=5.4e-15 Score=121.96 Aligned_cols=130 Identities=19% Similarity=0.073 Sum_probs=99.7
Q ss_pred HHHHhhcCCCeEEEecCCCchhHHHHHhhc--CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccc
Q 027388 77 LVQLYARRGDVVLDLACGKGGDLIKWDKAK--IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV 154 (224)
Q Consensus 77 ~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~--~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~ 154 (224)
+......++.+|||+|||+|.++..++... ...++|+|+++.+++.|++++. ..++. ++.+.++|+.++
T Consensus 196 ~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~--------~~g~~-~i~~~~~D~~~~ 266 (354)
T 3tma_A 196 LRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAAL--------ASGLS-WIRFLRADARHL 266 (354)
T ss_dssp HHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHH--------HTTCT-TCEEEECCGGGG
T ss_pred HHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHH--------HcCCC-ceEEEeCChhhC
Confidence 334455678899999999999999988643 4689999999999999999986 33444 699999999987
Q ss_pred ccccccCCCCCeeEEEEccccccccCC----HHHHHHHHHHHHhhccCCeEEEEEeCChHHHHHHhhhccc
Q 027388 155 HLDKVLADDAPFDICSCQFAMHYSWST----EARARRALANVSALLRPGGTFIGTMPDANVIIKKLREEHF 221 (224)
Q Consensus 155 ~~~~~~~~~~~~D~i~~~~~l~~~~~~----~~~~~~~l~~~~~~lk~gG~li~~~~~~~~~~~~~~~~gf 221 (224)
+. ....||+|+++..+...... ......++..+.++|+|||.+++.+++...+...+. .||
T Consensus 267 ~~-----~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~~~~~~~~~-~g~ 331 (354)
T 3tma_A 267 PR-----FFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRPALLKRALP-PGF 331 (354)
T ss_dssp GG-----TCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCHHHHHHHCC-TTE
T ss_pred cc-----ccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHhh-cCc
Confidence 65 45678999997655432111 123478899999999999999999999876655554 554
No 122
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.63 E-value=2.6e-15 Score=111.27 Aligned_cols=113 Identities=14% Similarity=0.143 Sum_probs=88.2
Q ss_pred cCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCC
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (224)
.++.+|||+|||+|.++..++... +++|+|+|+.+++. .. ++.++++|+.+ +. .
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~~~----~~--------------~~~~~~~d~~~-~~-----~ 75 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRALES----HR--------------GGNLVRADLLC-SI-----N 75 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHHHT----CS--------------SSCEEECSTTT-TB-----C
T ss_pred CCCCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHHhc----cc--------------CCeEEECChhh-hc-----c
Confidence 567899999999999999987555 99999999999987 11 37899999876 33 3
Q ss_pred CCCeeEEEEccccccccCC-----HHHHHHHHHHHHhhccCCeEEEEEeC---ChHHHHHHhhhcccc
Q 027388 163 DAPFDICSCQFAMHYSWST-----EARARRALANVSALLRPGGTFIGTMP---DANVIIKKLREEHFC 222 (224)
Q Consensus 163 ~~~~D~i~~~~~l~~~~~~-----~~~~~~~l~~~~~~lk~gG~li~~~~---~~~~~~~~~~~~gf~ 222 (224)
.++||+|+++..+++..+. ..+...++.++.+.+ |||.+++..+ ....+...++++||.
T Consensus 76 ~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~~~gf~ 142 (170)
T 3q87_B 76 QESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEANRPKEVLARLEERGYG 142 (170)
T ss_dssp GGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHHHTTCE
T ss_pred cCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHHHCCCc
Confidence 4799999999887753111 113456788888888 9999998754 457788899999985
No 123
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.63 E-value=3.9e-16 Score=119.25 Aligned_cols=138 Identities=14% Similarity=0.058 Sum_probs=82.5
Q ss_pred HHHHHHHhh-cCCCeEEEecCCCchhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccc
Q 027388 74 KSVLVQLYA-RRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDC 151 (224)
Q Consensus 74 ~~~~~~~~~-~~~~~iLDiGcG~G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~ 151 (224)
..++..+.. .++.+|||+|||+|.++..++... ..+++|+|+|+.+++.|++++... +. +++++++|+
T Consensus 19 ~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--------~~--~~~~~~~d~ 88 (215)
T 4dzr_A 19 EEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERF--------GA--VVDWAAADG 88 (215)
T ss_dssp HHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-----------------------------CCHHHH
T ss_pred HHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHh--------CC--ceEEEEcch
Confidence 334444333 678899999999999999988764 448999999999999999987621 22 588889998
Q ss_pred cccccccccCCCCCeeEEEEcccccccc------C----------------CHHHHHHHHHHHHhhccCCeE-EEEEeC-
Q 027388 152 YEVHLDKVLADDAPFDICSCQFAMHYSW------S----------------TEARARRALANVSALLRPGGT-FIGTMP- 207 (224)
Q Consensus 152 ~~~~~~~~~~~~~~~D~i~~~~~l~~~~------~----------------~~~~~~~~l~~~~~~lk~gG~-li~~~~- 207 (224)
.+ .........++||+|+++..++... . .......+++++.++|+|||+ +++..+
T Consensus 89 ~~-~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 167 (215)
T 4dzr_A 89 IE-WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGH 167 (215)
T ss_dssp HH-HHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTT
T ss_pred Hh-hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECC
Confidence 76 3311000138999999975443210 0 001127889999999999999 776654
Q ss_pred -ChHHHHHHhh--hcccc
Q 027388 208 -DANVIIKKLR--EEHFC 222 (224)
Q Consensus 208 -~~~~~~~~~~--~~gf~ 222 (224)
....+...+. +.||.
T Consensus 168 ~~~~~~~~~l~~~~~gf~ 185 (215)
T 4dzr_A 168 NQADEVARLFAPWRERGF 185 (215)
T ss_dssp SCHHHHHHHTGGGGGGTE
T ss_pred ccHHHHHHHHHHhhcCCc
Confidence 4577788888 78874
No 124
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.63 E-value=3.6e-15 Score=119.03 Aligned_cols=119 Identities=9% Similarity=0.017 Sum_probs=94.7
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccC
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (224)
..++.+|||+|||+|.++..++.....+++|+|+|+.+++.|++++. ..++..+++++++|+.+...
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~--------~n~~~~~v~~~~~D~~~~~~----- 189 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIH--------LNKVEDRMSAYNMDNRDFPG----- 189 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHH--------HTTCTTTEEEECSCTTTCCC-----
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHH--------HcCCCceEEEEECCHHHhcc-----
Confidence 45688999999999999999987665579999999999999999876 23455568999999987753
Q ss_pred CCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCC---------hHHHHHHhhhcccc
Q 027388 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD---------ANVIIKKLREEHFC 222 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~---------~~~~~~~~~~~gf~ 222 (224)
.+.||+|++..... ...++..+.++|+|||++++.+.. ...+.+.+.+.||.
T Consensus 190 -~~~fD~Vi~~~p~~--------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~ 250 (278)
T 2frn_A 190 -ENIADRILMGYVVR--------THEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYD 250 (278)
T ss_dssp -CSCEEEEEECCCSS--------GGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCE
T ss_pred -cCCccEEEECCchh--------HHHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCe
Confidence 57899999865422 256888999999999999986443 25667777777763
No 125
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.62 E-value=5.3e-15 Score=116.55 Aligned_cols=117 Identities=23% Similarity=0.263 Sum_probs=93.9
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccC
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (224)
..++.+|||+|||+|.++..+++.+. +++++|+|+.+++.+++++.. .++. +.+.++|+.+. .
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~~--------~~~~--v~~~~~d~~~~-~----- 180 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAKR--------NGVR--PRFLEGSLEAA-L----- 180 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHHH--------TTCC--CEEEESCHHHH-G-----
T ss_pred cCCCCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHHH--------cCCc--EEEEECChhhc-C-----
Confidence 46788999999999999998876555 999999999999999998762 2222 78888887653 2
Q ss_pred CCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEe---CChHHHHHHhhhcccc
Q 027388 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM---PDANVIIKKLREEHFC 222 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~---~~~~~~~~~~~~~gf~ 222 (224)
+.++||+|+++... .....++..+.++|+|||+++++. .....+...++++||.
T Consensus 181 ~~~~fD~Vv~n~~~-------~~~~~~l~~~~~~LkpgG~lils~~~~~~~~~v~~~l~~~Gf~ 237 (254)
T 2nxc_A 181 PFGPFDLLVANLYA-------ELHAALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAGFR 237 (254)
T ss_dssp GGCCEEEEEEECCH-------HHHHHHHHHHHHHEEEEEEEEEEEEEGGGHHHHHHHHHHTTCE
T ss_pred cCCCCCEEEECCcH-------HHHHHHHHHHHHHcCCCCEEEEEeeccCCHHHHHHHHHHCCCE
Confidence 24689999987654 345789999999999999999863 3457888889999985
No 126
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.62 E-value=1e-14 Score=116.23 Aligned_cols=125 Identities=10% Similarity=0.103 Sum_probs=96.5
Q ss_pred cCCCeEEEecCCCchhHHHHHhh-cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccC
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~-~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (224)
.++.+|||+|||+|.++..++.. ...+++++|+|+.+++.+++++.. .++. ++.++++|+.+..
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~--------~~~~-~v~~~~~d~~~~~------ 172 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQH--------LAIK-NIHILQSDWFSAL------ 172 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHH--------HTCC-SEEEECCSTTGGG------
T ss_pred cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH--------cCCC-ceEEEEcchhhhc------
Confidence 46789999999999999998854 356899999999999999998762 2222 5899999987632
Q ss_pred CCCCeeEEEEccccc-------------cccC--------CHHHHHHHHHHHHhhccCCeEEEEEeC--ChHHHHHHhhh
Q 027388 162 DDAPFDICSCQFAMH-------------YSWS--------TEARARRALANVSALLRPGGTFIGTMP--DANVIIKKLRE 218 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~-------------~~~~--------~~~~~~~~l~~~~~~lk~gG~li~~~~--~~~~~~~~~~~ 218 (224)
+.++||+|+++.... |-.. .......++..+.+.|+|||++++..+ ....+...+++
T Consensus 173 ~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~ 252 (276)
T 2b3t_A 173 AGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252 (276)
T ss_dssp TTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSSCHHHHHHHHHH
T ss_pred ccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECchHHHHHHHHHHH
Confidence 357899999984322 2100 014568899999999999999999865 44678888999
Q ss_pred cccc
Q 027388 219 EHFC 222 (224)
Q Consensus 219 ~gf~ 222 (224)
.||.
T Consensus 253 ~Gf~ 256 (276)
T 2b3t_A 253 AGYH 256 (276)
T ss_dssp TTCT
T ss_pred CCCc
Confidence 9985
No 127
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.62 E-value=2.7e-15 Score=119.14 Aligned_cols=118 Identities=19% Similarity=0.201 Sum_probs=85.9
Q ss_pred CCCeEEEecCCCch----hHHHHHhh-c----CCeEEEEeCChhHHHHHHHhccCCccc---------------------
Q 027388 84 RGDVVLDLACGKGG----DLIKWDKA-K----IGYYVGIDIAEGSIEDCRTRYNGDADH--------------------- 133 (224)
Q Consensus 84 ~~~~iLDiGcG~G~----~~~~l~~~-~----~~~~~gvD~s~~~~~~a~~~~~~~~~~--------------------- 133 (224)
++.+|||+|||||. +++.+++. . ..+++|+|+|+.|++.|++........
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 44444443 2 248999999999999999875310000
Q ss_pred -ccccccCCCCeeEEeccccccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeC
Q 027388 134 -HQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (224)
Q Consensus 134 -~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~ 207 (224)
......+..++.|.++|+.+.+.. ..+.||+|+|.++++|+ ..+...+++.++.+.|+|||+|++...
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~----~~~~fDlI~crnvliyf--~~~~~~~vl~~~~~~L~pgG~L~lg~s 253 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYN----VPGPFDAIFCRNVMIYF--DKTTQEDILRRFVPLLKPDGLLFAGHS 253 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCC----CCCCEEEEEECSSGGGS--CHHHHHHHHHHHGGGEEEEEEEEECTT
T ss_pred ceeechhhcccCeEEecccCCCCCC----cCCCeeEEEECCchHhC--CHHHHHHHHHHHHHHhCCCcEEEEEec
Confidence 000001113689999998874431 14789999999999998 667789999999999999999998643
No 128
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.62 E-value=5.5e-15 Score=115.13 Aligned_cols=130 Identities=14% Similarity=0.109 Sum_probs=89.2
Q ss_pred cCCCeEEEecCCCchhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccc-cc--ccc
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYE-VH--LDK 158 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~-~~--~~~ 158 (224)
.++.+|||||||+|.++..++... ...++|+|+|+.+++.|++++...... ......++.++++|+.+ ++ +
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~---~~~~~~nv~~~~~d~~~~l~~~~-- 119 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAA---PAGGFQNIACLRSNAMKHLPNFF-- 119 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHS---TTCCCTTEEEEECCTTTCHHHHC--
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHH---HhcCCCeEEEEECcHHHhhhhhC--
Confidence 466789999999999999988654 458999999999999998775410000 00112469999999976 43 2
Q ss_pred ccCCCCCeeEEEEccccccccCCHHH----HHHHHHHHHhhccCCeEEEEEeCChH---HHHHHhhhcc
Q 027388 159 VLADDAPFDICSCQFAMHYSWSTEAR----ARRALANVSALLRPGGTFIGTMPDAN---VIIKKLREEH 220 (224)
Q Consensus 159 ~~~~~~~~D~i~~~~~l~~~~~~~~~----~~~~l~~~~~~lk~gG~li~~~~~~~---~~~~~~~~~g 220 (224)
+.++||.|++++.-.|....... ...+++++.++|+|||.|++.+.+.. .+.+.+.+.+
T Consensus 120 ---~~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~~~~~~~~~~l~~~~ 185 (235)
T 3ckk_A 120 ---YKGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVLELHDWMCTHFEEHP 185 (235)
T ss_dssp ---CTTCEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTST
T ss_pred ---CCcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHHHHHCC
Confidence 46899999876543322000000 14799999999999999999998754 4444555544
No 129
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.62 E-value=7.7e-15 Score=121.18 Aligned_cols=109 Identities=21% Similarity=0.259 Sum_probs=88.8
Q ss_pred hhcCCCeEEEecCCCchhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccc
Q 027388 81 YARRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKV 159 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 159 (224)
...++.+|||||||+|.++..++... ..+++++|+ +.+++.+++++. ..++..+++++.+|+.+ +.
T Consensus 180 ~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~--------~~~~~~~v~~~~~d~~~-~~--- 246 (360)
T 1tw3_A 180 DWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLK--------DEGLSDRVDVVEGDFFE-PL--- 246 (360)
T ss_dssp CCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHH--------HTTCTTTEEEEECCTTS-CC---
T ss_pred CCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHH--------hcCCCCceEEEeCCCCC-CC---
Confidence 34567899999999999999888654 358999999 999999999876 23445579999999865 22
Q ss_pred cCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeC
Q 027388 160 LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (224)
Q Consensus 160 ~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~ 207 (224)
+..||+|++..++|++ +.++...+++++.++|+|||++++..+
T Consensus 247 ---~~~~D~v~~~~vl~~~--~~~~~~~~l~~~~~~L~pgG~l~i~e~ 289 (360)
T 1tw3_A 247 ---PRKADAIILSFVLLNW--PDHDAVRILTRCAEALEPGGRILIHER 289 (360)
T ss_dssp ---SSCEEEEEEESCGGGS--CHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred ---CCCccEEEEcccccCC--CHHHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 2359999999999987 556668999999999999999988643
No 130
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.62 E-value=7e-16 Score=114.65 Aligned_cols=103 Identities=13% Similarity=0.069 Sum_probs=82.7
Q ss_pred hcCCCeEEEecCCCchhHHHHHhh-cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccccc
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~-~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (224)
..++.+|||+|||+|.++..++.. ...+|+++|+|+.|++.+++++.. .+...++.+ +|.....
T Consensus 47 l~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~--------~g~~~~v~~--~d~~~~~----- 111 (200)
T 3fzg_A 47 IKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGK--------LKTTIKYRF--LNKESDV----- 111 (200)
T ss_dssp SCCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHH--------SCCSSEEEE--ECCHHHH-----
T ss_pred cCCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHh--------cCCCccEEE--ecccccC-----
Confidence 366889999999999999998654 344999999999999999999862 233333544 5654332
Q ss_pred CCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEE
Q 027388 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIG 204 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~ 204 (224)
+.++||+|++..++|++ ++....+.++.+.|+|||++|-
T Consensus 112 -~~~~~DvVLa~k~LHlL----~~~~~al~~v~~~L~pggvfIS 150 (200)
T 3fzg_A 112 -YKGTYDVVFLLKMLPVL----KQQDVNILDFLQLFHTQNFVIS 150 (200)
T ss_dssp -TTSEEEEEEEETCHHHH----HHTTCCHHHHHHTCEEEEEEEE
T ss_pred -CCCCcChhhHhhHHHhh----hhhHHHHHHHHHHhCCCCEEEE
Confidence 46889999999999998 7788888899999999998874
No 131
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.62 E-value=7.7e-17 Score=125.88 Aligned_cols=104 Identities=22% Similarity=0.235 Sum_probs=84.8
Q ss_pred cCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCC
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (224)
.++.+|||+|||+|.++..++... .+|+|+|+|+.+++.|++++.. .++..++.++++|+.+.+.
T Consensus 77 ~~~~~vLD~gcG~G~~~~~la~~~-~~v~~vD~s~~~~~~a~~~~~~--------~~~~~~~~~~~~d~~~~~~------ 141 (241)
T 3gdh_A 77 FKCDVVVDAFCGVGGNTIQFALTG-MRVIAIDIDPVKIALARNNAEV--------YGIADKIEFICGDFLLLAS------ 141 (241)
T ss_dssp SCCSEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHH--------TTCGGGEEEEESCHHHHGG------
T ss_pred cCCCEEEECccccCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHH--------cCCCcCeEEEECChHHhcc------
Confidence 478899999999999999998654 7999999999999999998762 2333469999999987652
Q ss_pred CCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 163 DAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 163 ~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
.++||+|+++.++++. .+....+.++.++|+|||.+++.
T Consensus 142 ~~~~D~v~~~~~~~~~----~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 142 FLKADVVFLSPPWGGP----DYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp GCCCSEEEECCCCSSG----GGGGSSSBCTTTSCSSCHHHHHH
T ss_pred cCCCCEEEECCCcCCc----chhhhHHHHHHhhcCCcceeHHH
Confidence 5799999999988876 33444667788899999987754
No 132
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.62 E-value=2.4e-15 Score=124.20 Aligned_cols=119 Identities=18% Similarity=0.188 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEec
Q 027388 70 NNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICG 149 (224)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~ 149 (224)
..|...+.......++++|||||||+|.++..+++.+..+|++||.|+ +++.|++.+. .+++..+|+++++
T Consensus 69 ~aY~~Ai~~~~~~~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~--------~n~~~~~i~~i~~ 139 (376)
T 4hc4_A 69 DAYRLGILRNWAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVR--------FNGLEDRVHVLPG 139 (376)
T ss_dssp HHHHHHHHTTHHHHTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHH--------HTTCTTTEEEEES
T ss_pred HHHHHHHHhCHHhcCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHH--------HcCCCceEEEEee
Confidence 344444444445568899999999999998887777778999999996 8899998876 3466778999999
Q ss_pred cccccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEE
Q 027388 150 DCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIG 204 (224)
Q Consensus 150 d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~ 204 (224)
+++++.+ +++||+|++-+.-. ++..+..+..++....++|+|||.++-
T Consensus 140 ~~~~~~l------pe~~DvivsE~~~~-~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 140 PVETVEL------PEQVDAIVSEWMGY-GLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp CTTTCCC------SSCEEEEECCCCBT-TBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred eeeeecC------CccccEEEeecccc-cccccchhhhHHHHHHhhCCCCceECC
Confidence 9998875 47899999854322 222345678888999999999999873
No 133
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.62 E-value=6.9e-15 Score=113.98 Aligned_cols=110 Identities=18% Similarity=0.128 Sum_probs=87.9
Q ss_pred HHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccc
Q 027388 73 IKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCY 152 (224)
Q Consensus 73 ~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~ 152 (224)
...++..+...++.+|||+|||+|.++..++... .+++++|+|+.+++.+++++... . ++.++++|+.
T Consensus 59 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~----------~-~v~~~~~d~~ 126 (231)
T 1vbf_A 59 GIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYY----------N-NIKLILGDGT 126 (231)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTC----------S-SEEEEESCGG
T ss_pred HHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhc----------C-CeEEEECCcc
Confidence 3334444556778899999999999999888655 79999999999999999987621 2 6899999987
Q ss_pred ccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCCh
Q 027388 153 EVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDA 209 (224)
Q Consensus 153 ~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~ 209 (224)
+... ..++||+|++..+++++ . ..+.++|+|||++++.+++.
T Consensus 127 ~~~~-----~~~~fD~v~~~~~~~~~--~--------~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 127 LGYE-----EEKPYDRVVVWATAPTL--L--------CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp GCCG-----GGCCEEEEEESSBBSSC--C--------HHHHHTEEEEEEEEEEECSS
T ss_pred cccc-----cCCCccEEEECCcHHHH--H--------HHHHHHcCCCcEEEEEEcCC
Confidence 6221 24789999999999987 2 25889999999999987653
No 134
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.62 E-value=4.8e-15 Score=116.60 Aligned_cols=124 Identities=20% Similarity=0.297 Sum_probs=98.5
Q ss_pred HHHHHhhcCCCeEEEecCCCchhHHHHHhh-c-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccc
Q 027388 76 VLVQLYARRGDVVLDLACGKGGDLIKWDKA-K-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYE 153 (224)
Q Consensus 76 ~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~-~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~ 153 (224)
++......++.+|||+|||+|.++..++.. . ..+++++|+|+.+++.|++++. ..++..++.++++|+.+
T Consensus 85 i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~--------~~~~~~~v~~~~~d~~~ 156 (255)
T 3mb5_A 85 IVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIK--------WAGFDDRVTIKLKDIYE 156 (255)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHH--------HHTCTTTEEEECSCGGG
T ss_pred HHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHH--------HcCCCCceEEEECchhh
Confidence 444455678899999999999999998866 3 5799999999999999999976 23445569999999875
Q ss_pred cccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCCh---HHHHHHhhhcc--cc
Q 027388 154 VHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDA---NVIIKKLREEH--FC 222 (224)
Q Consensus 154 ~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~---~~~~~~~~~~g--f~ 222 (224)
. . +.+.||+|+++. .++..++.++.++|+|||.+++..+.. ..+.+.+++.| |.
T Consensus 157 ~-~-----~~~~~D~v~~~~---------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g~~f~ 215 (255)
T 3mb5_A 157 G-I-----EEENVDHVILDL---------PQPERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFKDYFM 215 (255)
T ss_dssp C-C-----CCCSEEEEEECS---------SCGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTGGGBS
T ss_pred c-c-----CCCCcCEEEECC---------CCHHHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcc
Confidence 4 2 467899999843 234578999999999999999998865 35667778888 75
No 135
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.62 E-value=1.7e-15 Score=120.70 Aligned_cols=120 Identities=13% Similarity=0.148 Sum_probs=94.9
Q ss_pred HhhcCCCeEEEecCCCchhHHHHHhh--cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccc
Q 027388 80 LYARRGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD 157 (224)
Q Consensus 80 ~~~~~~~~iLDiGcG~G~~~~~l~~~--~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 157 (224)
+...++.+|||+|||+|.++..++.. ...+++++|+++.+++.|++++... .+ ..++.++++|+.+ ..
T Consensus 106 ~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-------~g-~~~v~~~~~d~~~-~~- 175 (275)
T 1yb2_A 106 CGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEF-------YD-IGNVRTSRSDIAD-FI- 175 (275)
T ss_dssp CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTT-------SC-CTTEEEECSCTTT-CC-
T ss_pred cCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhc-------CC-CCcEEEEECchhc-cC-
Confidence 34567889999999999999998865 3569999999999999999987621 01 2358999999876 33
Q ss_pred cccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCCh---HHHHHHhhhcccc
Q 027388 158 KVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDA---NVIIKKLREEHFC 222 (224)
Q Consensus 158 ~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~---~~~~~~~~~~gf~ 222 (224)
+.+.||+|++. + +++..+++++.++|+|||++++.+++. ..+.+.+.+.||.
T Consensus 176 ----~~~~fD~Vi~~-----~----~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~l~~~Gf~ 230 (275)
T 1yb2_A 176 ----SDQMYDAVIAD-----I----PDPWNHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLSASGMH 230 (275)
T ss_dssp ----CSCCEEEEEEC-----C----SCGGGSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSGGGTEE
T ss_pred ----cCCCccEEEEc-----C----cCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCe
Confidence 35789999983 2 234578999999999999999999986 4566677788874
No 136
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.61 E-value=8.3e-15 Score=117.13 Aligned_cols=134 Identities=11% Similarity=0.035 Sum_probs=93.4
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeC-ChhHHHHHHHhccCCcccccccccCC----CCeeEEecccccccc
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDI-AEGSIEDCRTRYNGDADHHQRRKKFS----FPARLICGDCYEVHL 156 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~-s~~~~~~a~~~~~~~~~~~~~~~~~~----~~v~~~~~d~~~~~~ 156 (224)
..++.+|||||||+|.++..++..+..+|+++|+ |+.+++.+++++..+.. +..++. .++.+...++.+...
T Consensus 77 ~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~---~~~~~~~~~~~~v~~~~~~~~~~~~ 153 (281)
T 3bzb_A 77 LIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTA---NSCSSETVKRASPKVVPYRWGDSPD 153 (281)
T ss_dssp GTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC-------------CCCEEEECCTTSCTH
T ss_pred hcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhh---hhcccccCCCCCeEEEEecCCCccH
Confidence 3567899999999999999887665558999999 89999999998731100 011222 357777666544211
Q ss_pred cccc-CCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhcc---C--CeEEEEEeCC--------hHHHHHHhhhcc-c
Q 027388 157 DKVL-ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLR---P--GGTFIGTMPD--------ANVIIKKLREEH-F 221 (224)
Q Consensus 157 ~~~~-~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk---~--gG~li~~~~~--------~~~~~~~~~~~g-f 221 (224)
.... ...++||+|++..++++. .+...++..+.++|+ | ||.+++.... ...+.+.+.+.| |
T Consensus 154 ~~~~~~~~~~fD~Ii~~dvl~~~----~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~~~~~~~~~~~~l~~~G~f 229 (281)
T 3bzb_A 154 SLQRCTGLQRFQVVLLADLLSFH----QAHDALLRSVKMLLALPANDPTAVALVTFTHHRPHLAERDLAFFRLVNADGAL 229 (281)
T ss_dssp HHHHHHSCSSBSEEEEESCCSCG----GGHHHHHHHHHHHBCCTTTCTTCEEEEEECC--------CTHHHHHHHHSTTE
T ss_pred HHHhhccCCCCCEEEEeCcccCh----HHHHHHHHHHHHHhcccCCCCCCEEEEEEEeeecccchhHHHHHHHHHhcCCE
Confidence 0000 014789999999998875 678899999999999 9 9987664322 345667778888 6
Q ss_pred c
Q 027388 222 C 222 (224)
Q Consensus 222 ~ 222 (224)
.
T Consensus 230 ~ 230 (281)
T 3bzb_A 230 I 230 (281)
T ss_dssp E
T ss_pred E
Confidence 4
No 137
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.61 E-value=2e-15 Score=128.87 Aligned_cols=116 Identities=17% Similarity=0.196 Sum_probs=91.2
Q ss_pred HHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccc
Q 027388 73 IKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCY 152 (224)
Q Consensus 73 ~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~ 152 (224)
...++..+...++.+|||||||+|.++..+++....+|+++|+|+ +++.|++++. ..++..+++++++|+.
T Consensus 147 ~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~--------~~gl~~~v~~~~~d~~ 217 (480)
T 3b3j_A 147 QRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVK--------SNNLTDRIVVIPGKVE 217 (480)
T ss_dssp HHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHH--------HTTCTTTEEEEESCTT
T ss_pred HHHHHHhhhhcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHH--------HcCCCCcEEEEECchh
Confidence 333444444457789999999999999988765566999999998 9999998876 2355567999999998
Q ss_pred ccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 153 EVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 153 ~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
+++. .++||+|++..+++++ ..++....+..+.++|+|||.+++.
T Consensus 218 ~~~~------~~~fD~Ivs~~~~~~~--~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 218 EVSL------PEQVDIIISEPMGYML--FNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp TCCC------SSCEEEEECCCCHHHH--TCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred hCcc------CCCeEEEEEeCchHhc--CcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 7654 3689999998776665 3355667778999999999999864
No 138
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.61 E-value=7.4e-15 Score=113.27 Aligned_cols=125 Identities=13% Similarity=0.100 Sum_probs=93.2
Q ss_pred hcCCCeEEEecCCCchhHHHHHhh--cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccc-c
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD-K 158 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~--~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~ 158 (224)
..++.+|||||||+|..+..++.. ...+++++|+++.+++.|++++. ..++..+++++++|+.+.... .
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~--------~~~~~~~v~~~~~d~~~~l~~~~ 127 (221)
T 3u81_A 56 EYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLN--------FAGLQDKVTILNGASQDLIPQLK 127 (221)
T ss_dssp HHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHH--------HHTCGGGEEEEESCHHHHGGGTT
T ss_pred hcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHH--------HcCCCCceEEEECCHHHHHHHHH
Confidence 357889999999999999998864 35699999999999999999876 334555699999998653211 0
Q ss_pred ccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeC---ChHHHHHHhhhc
Q 027388 159 VLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP---DANVIIKKLREE 219 (224)
Q Consensus 159 ~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~---~~~~~~~~~~~~ 219 (224)
.....++||+|++....++. .....++..+ ++|+|||+|++... ....+.+.+.+.
T Consensus 128 ~~~~~~~fD~V~~d~~~~~~----~~~~~~~~~~-~~LkpgG~lv~~~~~~~~~~~~~~~l~~~ 186 (221)
T 3u81_A 128 KKYDVDTLDMVFLDHWKDRY----LPDTLLLEKC-GLLRKGTVLLADNVIVPGTPDFLAYVRGS 186 (221)
T ss_dssp TTSCCCCCSEEEECSCGGGH----HHHHHHHHHT-TCCCTTCEEEESCCCCCCCHHHHHHHHHC
T ss_pred HhcCCCceEEEEEcCCcccc----hHHHHHHHhc-cccCCCeEEEEeCCCCcchHHHHHHHhhC
Confidence 00012689999998877665 5566777777 99999999998643 335566666544
No 139
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.61 E-value=9.3e-15 Score=115.83 Aligned_cols=102 Identities=20% Similarity=0.370 Sum_probs=84.8
Q ss_pred cCCCeEEEecCCCchhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccC
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (224)
.++.+|||||||+|.++..++... ..+++++|+|+.+++.|+++.. ++.+..+|+.+++.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~--------------~~~~~~~d~~~~~~----- 144 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYP--------------QVTFCVASSHRLPF----- 144 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCT--------------TSEEEECCTTSCSB-----
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCC--------------CcEEEEcchhhCCC-----
Confidence 567899999999999999988653 5689999999999999998754 47899999887765
Q ss_pred CCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCChHHHHH
Q 027388 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVIIK 214 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~~~~~~ 214 (224)
..++||+|++..+.. ++.++.++|+|||.+++.+++...+.+
T Consensus 145 ~~~~fD~v~~~~~~~-----------~l~~~~~~L~pgG~l~~~~~~~~~~~~ 186 (269)
T 1p91_A 145 SDTSMDAIIRIYAPC-----------KAEELARVVKPGGWVITATPGPRHLME 186 (269)
T ss_dssp CTTCEEEEEEESCCC-----------CHHHHHHHEEEEEEEEEEEECTTTTHH
T ss_pred CCCceeEEEEeCChh-----------hHHHHHHhcCCCcEEEEEEcCHHHHHH
Confidence 467999999876532 468899999999999999887655443
No 140
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.61 E-value=5.6e-15 Score=113.53 Aligned_cols=116 Identities=16% Similarity=0.212 Sum_probs=81.6
Q ss_pred HHHHHhhcCCCeEEEecCCCchhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccc
Q 027388 76 VLVQLYARRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV 154 (224)
Q Consensus 76 ~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~ 154 (224)
.+..+...++.+|||||||+|.++..++... ..+++|+|+|+.|++.+.+...... .... ..++.++++|+.++
T Consensus 19 ~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~----~~~~-~~~v~~~~~d~~~l 93 (218)
T 3mq2_A 19 EFEQLRSQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKP----AKGG-LPNLLYLWATAERL 93 (218)
T ss_dssp HHHHHHTTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCG----GGTC-CTTEEEEECCSTTC
T ss_pred HHHHhhccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhh----hhcC-CCceEEEecchhhC
Confidence 3444456788899999999999999998764 5689999999999986433322100 0112 23699999999987
Q ss_pred ccccccCCCCCeeEEEEcc---ccc--cccCCHHHHHHHHHHHHhhccCCeEEEEEe
Q 027388 155 HLDKVLADDAPFDICSCQF---AMH--YSWSTEARARRALANVSALLRPGGTFIGTM 206 (224)
Q Consensus 155 ~~~~~~~~~~~~D~i~~~~---~l~--~~~~~~~~~~~~l~~~~~~lk~gG~li~~~ 206 (224)
+. ..+. |.|+... .++ |+ .++..+++++.++|||||.+++..
T Consensus 94 ~~-----~~~~-d~v~~~~~~~~~~~~~~----~~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 94 PP-----LSGV-GELHVLMPWGSLLRGVL----GSSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp CS-----CCCE-EEEEEESCCHHHHHHHH----TSSSHHHHHHHHTEEEEEEEEEEE
T ss_pred CC-----CCCC-CEEEEEccchhhhhhhh----ccHHHHHHHHHHHcCCCcEEEEEe
Confidence 75 3344 6666332 221 32 334789999999999999999863
No 141
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.61 E-value=7.6e-15 Score=114.08 Aligned_cols=106 Identities=17% Similarity=0.202 Sum_probs=85.5
Q ss_pred hhcCCCeEEEecCCCchhHHHHHhh-cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccc-cc
Q 027388 81 YARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHL-DK 158 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~G~~~~~l~~~-~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~ 158 (224)
...++.+|||||||+|..+..++.. ...+++++|+++.+++.|++++. ..++..++.++++|+.+... .
T Consensus 68 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~--------~~~~~~~v~~~~~d~~~~~~~~- 138 (232)
T 3ntv_A 68 RMNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLA--------TYHFENQVRIIEGNALEQFENV- 138 (232)
T ss_dssp HHHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHH--------HTTCTTTEEEEESCGGGCHHHH-
T ss_pred hhcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHH--------HcCCCCcEEEEECCHHHHHHhh-
Confidence 3457889999999999999998863 35689999999999999999986 23445579999999976421 1
Q ss_pred ccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 159 VLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 159 ~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
..++||+|++.... .....++..+.++|+|||+|++.
T Consensus 139 ---~~~~fD~V~~~~~~-------~~~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 139 ---NDKVYDMIFIDAAK-------AQSKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp ---TTSCEEEEEEETTS-------SSHHHHHHHHGGGEEEEEEEEEE
T ss_pred ---ccCCccEEEEcCcH-------HHHHHHHHHHHHhcCCCeEEEEe
Confidence 25789999977543 33567999999999999999984
No 142
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.60 E-value=1.3e-14 Score=117.21 Aligned_cols=130 Identities=17% Similarity=0.210 Sum_probs=93.7
Q ss_pred cCCCeEEEecCCCchhHHHHHhh-cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccC
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~-~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (224)
.++.+|||||||+|.++..+++. ...+++++|+|+.+++.|++++.... ......+++++++|+.+.....
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~-----~~~~~~~v~~~~~D~~~~~~~~--- 165 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQIS-----RSLADPRATVRVGDGLAFVRQT--- 165 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHH-----GGGGCTTEEEEESCHHHHHHSS---
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhh-----cccCCCcEEEEECcHHHHHHhc---
Confidence 56789999999999999998865 34689999999999999999873100 0112456899999987754310
Q ss_pred CCCCeeEEEEccccccccCCHHHH--HHHHHHHHhhccCCeEEEEEeCCh-------HHHHHHhhhcccc
Q 027388 162 DDAPFDICSCQFAMHYSWSTEARA--RRALANVSALLRPGGTFIGTMPDA-------NVIIKKLREEHFC 222 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~~~~~~~~~~--~~~l~~~~~~lk~gG~li~~~~~~-------~~~~~~~~~~gf~ 222 (224)
..++||+|++.....+. +...+ ..+++.+.++|+|||++++...+. ..+...+++.||.
T Consensus 166 ~~~~fDvIi~d~~~~~~--~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~ 233 (304)
T 3bwc_A 166 PDNTYDVVIIDTTDPAG--PASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFA 233 (304)
T ss_dssp CTTCEEEEEEECC-----------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCS
T ss_pred cCCceeEEEECCCCccc--cchhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCC
Confidence 25789999997655432 11112 689999999999999999976542 4577778888874
No 143
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.60 E-value=1.3e-14 Score=118.57 Aligned_cols=102 Identities=21% Similarity=0.152 Sum_probs=86.4
Q ss_pred CeEEEecCCCchhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCCCC
Q 027388 86 DVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDA 164 (224)
Q Consensus 86 ~~iLDiGcG~G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~ 164 (224)
.+|||+|||+|.++..++... ..+++++|+ +.+++.+++++. ..++..+++++.+|+.+ +. +.
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~--------~~~~~~~v~~~~~d~~~-~~------~~ 232 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLS--------SLLAGERVSLVGGDMLQ-EV------PS 232 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTH--------HHHHTTSEEEEESCTTT-CC------CS
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHh--------hcCCCCcEEEecCCCCC-CC------CC
Confidence 899999999999999988653 458999999 999999998875 22344569999999876 33 36
Q ss_pred CeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 165 PFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 165 ~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
+||+|++..++|++ +.+....+++++.+.|+|||+|++.
T Consensus 233 ~~D~v~~~~vl~~~--~~~~~~~~l~~~~~~L~pgG~l~i~ 271 (334)
T 2ip2_A 233 NGDIYLLSRIIGDL--DEAASLRLLGNCREAMAGDGRVVVI 271 (334)
T ss_dssp SCSEEEEESCGGGC--CHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred CCCEEEEchhccCC--CHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 79999999999987 5667789999999999999999887
No 144
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.60 E-value=4.7e-15 Score=114.79 Aligned_cols=110 Identities=18% Similarity=0.197 Sum_probs=76.6
Q ss_pred hcCCCeEEEecCCCchhHHHHHhh-cCCeEEEEeCC-hhHHHHH---HHhccCCcccccccccCCCCeeEEecccccccc
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIA-EGSIEDC---RTRYNGDADHHQRRKKFSFPARLICGDCYEVHL 156 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~-~~~~~~gvD~s-~~~~~~a---~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 156 (224)
..++.+|||||||+|.++..++.. ....|+|||+| +.|++.| +++... .++ .++.++++|+..++.
T Consensus 22 ~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~--------~~~-~~v~~~~~d~~~l~~ 92 (225)
T 3p2e_A 22 GQFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSK--------GGL-SNVVFVIAAAESLPF 92 (225)
T ss_dssp TTCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGG--------TCC-SSEEEECCBTTBCCG
T ss_pred CCCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHH--------cCC-CCeEEEEcCHHHhhh
Confidence 457789999999999999998753 44579999999 7777776 655541 222 358999999988753
Q ss_pred ccccCCCCCeeEEEEccccccccC-CHHHHHHHHHHHHhhccCCeEEEE
Q 027388 157 DKVLADDAPFDICSCQFAMHYSWS-TEARARRALANVSALLRPGGTFIG 204 (224)
Q Consensus 157 ~~~~~~~~~~D~i~~~~~l~~~~~-~~~~~~~~l~~~~~~lk~gG~li~ 204 (224)
. ..+.+|.|++++....... ...+...++.++.++|||||.+++
T Consensus 93 ~----~~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 93 E----LKNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp G----GTTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred h----ccCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 1 1256777766543221000 001124689999999999999998
No 145
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.60 E-value=8.3e-15 Score=115.27 Aligned_cols=124 Identities=16% Similarity=0.262 Sum_probs=97.4
Q ss_pred HHHHHhhcCCCeEEEecCCCchhHHHHHhh-c-CCeEEEEeCChhHHHHHHHhccCCcccccccc-cCCCCeeEEecccc
Q 027388 76 VLVQLYARRGDVVLDLACGKGGDLIKWDKA-K-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRK-KFSFPARLICGDCY 152 (224)
Q Consensus 76 ~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~-~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~-~~~~~v~~~~~d~~ 152 (224)
++......++.+|||+|||+|.++..++.. . ..+++++|+++.+++.|++++.. . + ..++.+.++|+.
T Consensus 88 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~--------~~g-~~~v~~~~~d~~ 158 (258)
T 2pwy_A 88 MVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRA--------FWQ-VENVRFHLGKLE 158 (258)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHH--------HCC-CCCEEEEESCGG
T ss_pred HHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHH--------hcC-CCCEEEEECchh
Confidence 444445678899999999999999998876 3 56999999999999999998751 1 2 346899999988
Q ss_pred ccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCChH---HHHHHhhhcccc
Q 027388 153 EVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDAN---VIIKKLREEHFC 222 (224)
Q Consensus 153 ~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~~---~~~~~~~~~gf~ 222 (224)
+.++ +.+.||+|++.. .++..++.++.++|+|||.+++..+... .+...+++.||.
T Consensus 159 ~~~~-----~~~~~D~v~~~~---------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~gf~ 217 (258)
T 2pwy_A 159 EAEL-----EEAAYDGVALDL---------MEPWKVLEKAALALKPDRFLVAYLPNITQVLELVRAAEAHPFR 217 (258)
T ss_dssp GCCC-----CTTCEEEEEEES---------SCGGGGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHTTTTEE
T ss_pred hcCC-----CCCCcCEEEECC---------cCHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCc
Confidence 7644 457899999842 2345789999999999999999998763 555667777774
No 146
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.60 E-value=9e-15 Score=112.74 Aligned_cols=122 Identities=11% Similarity=0.031 Sum_probs=99.7
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccccc
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (224)
..++.+|||||||+|.+++.++... ..+++++|+++.+++.|++++. ..++..++.+.++|..+...
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~--------~~gl~~~I~~~~gD~l~~~~---- 86 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVS--------EHGLTSKIDVRLANGLSAFE---- 86 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHH--------HTTCTTTEEEEECSGGGGCC----
T ss_pred CCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHH--------HcCCCCcEEEEECchhhccc----
Confidence 4677899999999999999988765 4579999999999999999987 34566679999999876543
Q ss_pred CCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeC-ChHHHHHHhhhcccc
Q 027388 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP-DANVIIKKLREEHFC 222 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~-~~~~~~~~~~~~gf~ 222 (224)
+...||+|+..+.-. .-...++......|+++|.|+++.- +.+.+++.+.+.||.
T Consensus 87 -~~~~~D~IviaGmGg------~lI~~IL~~~~~~l~~~~~lIlqp~~~~~~lr~~L~~~Gf~ 142 (230)
T 3lec_A 87 -EADNIDTITICGMGG------RLIADILNNDIDKLQHVKTLVLQPNNREDDLRKWLAANDFE 142 (230)
T ss_dssp -GGGCCCEEEEEEECH------HHHHHHHHHTGGGGTTCCEEEEEESSCHHHHHHHHHHTTEE
T ss_pred -cccccCEEEEeCCch------HHHHHHHHHHHHHhCcCCEEEEECCCChHHHHHHHHHCCCE
Confidence 234799998766533 4577889999999999999998854 568899999999985
No 147
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.60 E-value=1.1e-14 Score=113.06 Aligned_cols=101 Identities=16% Similarity=0.146 Sum_probs=80.1
Q ss_pred hcCCCeEEEecCCCchhHHHHHhh-cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccc----ccc
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYE----VHL 156 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~-~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~----~~~ 156 (224)
..++.+|||+|||+|.++..++.. +..+++|+|+|+.+++.+++++.. ..++.++++|+.. .+.
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~-----------~~~v~~~~~d~~~~~~~~~~ 140 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAE-----------RENIIPILGDANKPQEYANI 140 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTT-----------CTTEEEEECCTTCGGGGTTT
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhc-----------CCCeEEEECCCCCccccccc
Confidence 457789999999999999998866 346899999999999999988752 1468999999876 333
Q ss_pred ccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 157 DKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 157 ~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
. ..||+|+.. + ........++.++.+.|+|||.+++.
T Consensus 141 -----~-~~~D~v~~~-----~-~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 141 -----V-EKVDVIYED-----V-AQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp -----S-CCEEEEEEC-----C-CSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -----C-ccEEEEEEe-----c-CChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 3 689999932 2 12233467899999999999999985
No 148
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.59 E-value=1e-13 Score=105.51 Aligned_cols=118 Identities=16% Similarity=0.102 Sum_probs=89.5
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccC
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (224)
..++.+|||+|||+|.++..++..+..+++|+|+|+.+++.+++++.. .++ ++.++++|+.+++
T Consensus 47 ~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~--------~~~--~~~~~~~d~~~~~------ 110 (207)
T 1wy7_A 47 DIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGE--------FKG--KFKVFIGDVSEFN------ 110 (207)
T ss_dssp SSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGG--------GTT--SEEEEESCGGGCC------
T ss_pred CCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHH--------cCC--CEEEEECchHHcC------
Confidence 456789999999999999998876566899999999999999999762 222 6899999987642
Q ss_pred CCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCC---hHHHHHHhhhccc
Q 027388 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD---ANVIIKKLREEHF 221 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~---~~~~~~~~~~~gf 221 (224)
..||+|+++..++.. .......+++.+.+++ |+.+++..++ ...+.+.+.+.||
T Consensus 111 --~~~D~v~~~~p~~~~--~~~~~~~~l~~~~~~l--~~~~~~~~~~~~~~~~~~~~l~~~g~ 167 (207)
T 1wy7_A 111 --SRVDIVIMNPPFGSQ--RKHADRPFLLKAFEIS--DVVYSIHLAKPEVRRFIEKFSWEHGF 167 (207)
T ss_dssp --CCCSEEEECCCCSSS--STTTTHHHHHHHHHHC--SEEEEEEECCHHHHHHHHHHHHHTTE
T ss_pred --CCCCEEEEcCCCccc--cCCchHHHHHHHHHhc--CcEEEEEeCCcCCHHHHHHHHHHCCC
Confidence 489999999887654 2223456788888888 6666665433 3445666777776
No 149
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.59 E-value=8.4e-15 Score=113.81 Aligned_cols=122 Identities=19% Similarity=0.195 Sum_probs=88.8
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhc--CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccc
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAK--IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKV 159 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~--~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 159 (224)
..++.+|||+|||+|.++..++... ..+++|+|+|+.+++.+.+.... ..++.++++|+.+...-..
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~-----------~~~v~~~~~d~~~~~~~~~ 143 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKK-----------RTNIIPVIEDARHPHKYRM 143 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHH-----------CTTEEEECSCTTCGGGGGG
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhc-----------cCCeEEEEcccCChhhhcc
Confidence 4578899999999999999988752 46899999999887777666541 1458999999876321000
Q ss_pred cCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCC------------hHHHHHHhhhcccc
Q 027388 160 LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD------------ANVIIKKLREEHFC 222 (224)
Q Consensus 160 ~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~------------~~~~~~~~~~~gf~ 222 (224)
..+.||+|++... .......++.++.++|+|||++++.... ...-.+.++++||.
T Consensus 144 --~~~~~D~V~~~~~------~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 210 (233)
T 2ipx_A 144 --LIAMVDVIFADVA------QPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMK 210 (233)
T ss_dssp --GCCCEEEEEECCC------CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTEE
T ss_pred --cCCcEEEEEEcCC------CccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCCc
Confidence 3578999998654 1234466788999999999999997543 11114667777874
No 150
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.59 E-value=1.9e-14 Score=113.06 Aligned_cols=120 Identities=13% Similarity=0.014 Sum_probs=89.7
Q ss_pred cCCCeEEEecCCCchhHHHHHhh-cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccC
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~-~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (224)
.++.+|||||||+|..+..++.. ...+|+++|+|+.+++.+++++.. .++. +++++++|+.++.....
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~--------~~l~-~v~~~~~d~~~~~~~~~-- 147 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEV--------LGLK-GARALWGRAEVLAREAG-- 147 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHH--------HTCS-SEEEEECCHHHHTTSTT--
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH--------hCCC-ceEEEECcHHHhhcccc--
Confidence 35789999999999999988865 456899999999999999998762 2333 49999999987653100
Q ss_pred CCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCC-h----HHHHHHhhhccc
Q 027388 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD-A----NVIIKKLREEHF 221 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~-~----~~~~~~~~~~gf 221 (224)
..++||+|++..+. +...++..+.++|+|||.+++.... . ..+...+...||
T Consensus 148 ~~~~fD~I~s~a~~--------~~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~ 204 (249)
T 3g89_A 148 HREAYARAVARAVA--------PLCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGG 204 (249)
T ss_dssp TTTCEEEEEEESSC--------CHHHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHHHHHHTE
T ss_pred cCCCceEEEECCcC--------CHHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCC
Confidence 24789999987542 3467899999999999998876432 1 234445555565
No 151
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.59 E-value=8e-14 Score=105.67 Aligned_cols=113 Identities=12% Similarity=0.081 Sum_probs=82.5
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccC
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (224)
..++.+|||+|||+|.++..++..+..+++|+|+|+.+++.+++++. ++.++++|+.+++
T Consensus 49 ~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~--------------~~~~~~~d~~~~~------ 108 (200)
T 1ne2_A 49 NIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG--------------GVNFMVADVSEIS------ 108 (200)
T ss_dssp SSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT--------------TSEEEECCGGGCC------
T ss_pred CCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC--------------CCEEEECcHHHCC------
Confidence 44678999999999999998886655579999999999999998864 4899999987642
Q ss_pred CCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCC-hHHHHHHhhhcc
Q 027388 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD-ANVIIKKLREEH 220 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~-~~~~~~~~~~~g 220 (224)
+.||+|+++..+++. .......+++++.+.+ |+++++..+. ...+.+.+.+.|
T Consensus 109 --~~~D~v~~~~p~~~~--~~~~~~~~l~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~g 162 (200)
T 1ne2_A 109 --GKYDTWIMNPPFGSV--VKHSDRAFIDKAFETS--MWIYSIGNAKARDFLRREFSARG 162 (200)
T ss_dssp --CCEEEEEECCCC---------CHHHHHHHHHHE--EEEEEEEEGGGHHHHHHHHHHHE
T ss_pred --CCeeEEEECCCchhc--cCchhHHHHHHHHHhc--CcEEEEEcCchHHHHHHHHHHCC
Confidence 589999999998876 2223457889999988 5555554443 344555555554
No 152
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.58 E-value=1.1e-14 Score=111.49 Aligned_cols=106 Identities=12% Similarity=0.043 Sum_probs=77.2
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccccc
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (224)
..++.+|||+|||+|.++..++... .++|+|+|+|+.|++.+.+.... ..++.++++|+........
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~-----------~~~v~~~~~d~~~~~~~~~- 122 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRE-----------RNNIIPLLFDASKPWKYSG- 122 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHH-----------CSSEEEECSCTTCGGGTTT-
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhc-----------CCCeEEEEcCCCCchhhcc-
Confidence 4578899999999999998887643 46899999999987665554331 1257888888866311000
Q ss_pred CCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEe
Q 027388 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~ 206 (224)
..+.||+|++.. .. ......+++++.++|||||.|++..
T Consensus 123 -~~~~fD~V~~~~-~~-----~~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 123 -IVEKVDLIYQDI-AQ-----KNQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp -TCCCEEEEEECC-CS-----TTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -cccceeEEEEec-cC-----hhHHHHHHHHHHHHhCCCCEEEEEE
Confidence 237899999873 21 1345567999999999999999874
No 153
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.58 E-value=1.7e-14 Score=110.52 Aligned_cols=111 Identities=18% Similarity=0.092 Sum_probs=86.7
Q ss_pred HHHHHHhhcCCCeEEEecCCCchhHHHHHhhcC--CeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccc
Q 027388 75 SVLVQLYARRGDVVLDLACGKGGDLIKWDKAKI--GYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCY 152 (224)
Q Consensus 75 ~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~--~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~ 152 (224)
.++..+...++.+|||+|||+|.++..++.... .+++++|+|+.+++.+++++.. .+. .++.+.++|+.
T Consensus 68 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~--------~~~-~~v~~~~~d~~ 138 (215)
T 2yxe_A 68 MMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRK--------LGY-DNVIVIVGDGT 138 (215)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHH--------HTC-TTEEEEESCGG
T ss_pred HHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHH--------cCC-CCeEEEECCcc
Confidence 344444567788999999999999998886543 6899999999999999998752 122 24889999974
Q ss_pred ccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCCh
Q 027388 153 EVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDA 209 (224)
Q Consensus 153 ~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~ 209 (224)
.... ..++||+|++..+++++ . ..+.++|+|||.+++.+++.
T Consensus 139 ~~~~-----~~~~fD~v~~~~~~~~~--~--------~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 139 LGYE-----PLAPYDRIYTTAAGPKI--P--------EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp GCCG-----GGCCEEEEEESSBBSSC--C--------HHHHHTEEEEEEEEEEESSS
T ss_pred cCCC-----CCCCeeEEEECCchHHH--H--------HHHHHHcCCCcEEEEEECCC
Confidence 3221 24689999999999987 2 37899999999999987754
No 154
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.58 E-value=6.2e-15 Score=113.83 Aligned_cols=103 Identities=12% Similarity=0.128 Sum_probs=82.3
Q ss_pred CCeEEEecCCCchhHHHHHhh--cCCeEEEEeCChhHHHHHHHhccCCcccccccccCC-CCeeEEeccccccccccccC
Q 027388 85 GDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFS-FPARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 85 ~~~iLDiGcG~G~~~~~l~~~--~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~ 161 (224)
+.+|||||||+|..+..++.. ..++++++|+++.+++.|++++. ..++. .+++++++|+.+.... .
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~--------~~g~~~~~i~~~~gda~~~l~~-~-- 125 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFR--------EAGYSPSRVRFLLSRPLDVMSR-L-- 125 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHH--------HTTCCGGGEEEECSCHHHHGGG-S--
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH--------HcCCCcCcEEEEEcCHHHHHHH-h--
Confidence 349999999999999988864 25799999999999999999987 23444 5799999998765321 0
Q ss_pred CCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
..++||+|++.... .....++..+.++|+|||++++.
T Consensus 126 ~~~~fD~V~~d~~~-------~~~~~~l~~~~~~LkpGG~lv~d 162 (221)
T 3dr5_A 126 ANDSYQLVFGQVSP-------MDLKALVDAAWPLLRRGGALVLA 162 (221)
T ss_dssp CTTCEEEEEECCCT-------TTHHHHHHHHHHHEEEEEEEEET
T ss_pred cCCCcCeEEEcCcH-------HHHHHHHHHHHHHcCCCcEEEEe
Confidence 25789999987643 33567899999999999999985
No 155
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.58 E-value=1.5e-14 Score=111.22 Aligned_cols=122 Identities=11% Similarity=0.051 Sum_probs=97.6
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccccc
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (224)
..++.+|||||||+|.+++.++... ..+++++|+++.+++.|++++. ..++..++.+.++|..+.-.
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~--------~~gl~~~i~~~~~d~l~~l~---- 80 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVE--------AHGLKEKIQVRLANGLAAFE---- 80 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHH--------HTTCTTTEEEEECSGGGGCC----
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHH--------HcCCCceEEEEECchhhhcc----
Confidence 4577899999999999999998765 4579999999999999999987 34566679999999854211
Q ss_pred CCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeC-ChHHHHHHhhhcccc
Q 027388 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP-DANVIIKKLREEHFC 222 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~-~~~~~~~~~~~~gf~ 222 (224)
....||+|+..++- ..-...++......|+++|+|+++.. ....+++.+.+.||.
T Consensus 81 -~~~~~D~IviaG~G------g~~i~~Il~~~~~~L~~~~~lVlq~~~~~~~vr~~L~~~Gf~ 136 (225)
T 3kr9_A 81 -ETDQVSVITIAGMG------GRLIARILEEGLGKLANVERLILQPNNREDDLRIWLQDHGFQ 136 (225)
T ss_dssp -GGGCCCEEEEEEEC------HHHHHHHHHHTGGGCTTCCEEEEEESSCHHHHHHHHHHTTEE
T ss_pred -cCcCCCEEEEcCCC------hHHHHHHHHHHHHHhCCCCEEEEECCCCHHHHHHHHHHCCCE
Confidence 12369999876542 24467899999999999999999754 467888999999985
No 156
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.58 E-value=2.1e-14 Score=113.50 Aligned_cols=132 Identities=15% Similarity=0.049 Sum_probs=92.6
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccc--
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK-- 158 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~-- 158 (224)
..++.+|||+|||+|.++..++... ..+++++|+++.+++.|++++.... ..++..++.++++|+.+.....
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~-----~~~l~~~v~~~~~D~~~~~~~~~~ 108 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPD-----NAAFSARIEVLEADVTLRAKARVE 108 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGG-----GTTTGGGEEEEECCTTCCHHHHHH
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhh-----hCCCcceEEEEeCCHHHHhhhhhh
Confidence 3467899999999999999888764 4689999999999999999987300 0234446899999998762100
Q ss_pred ccCCCCCeeEEEEcccccccc--------------CCHHHHHHHHHHHHhhccCCeEEEEEeCCh--HHHHHHhhh
Q 027388 159 VLADDAPFDICSCQFAMHYSW--------------STEARARRALANVSALLRPGGTFIGTMPDA--NVIIKKLRE 218 (224)
Q Consensus 159 ~~~~~~~~D~i~~~~~l~~~~--------------~~~~~~~~~l~~~~~~lk~gG~li~~~~~~--~~~~~~~~~ 218 (224)
.....+.||+|+++..+.... ........+++.+.++|+|||.|++..+.. ..+...+++
T Consensus 109 ~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~ 184 (260)
T 2ozv_A 109 AGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQSVAEIIAACGS 184 (260)
T ss_dssp TTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGGGHHHHHHHHTT
T ss_pred hccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHHHHHHHHHHHHh
Confidence 001357899999984433210 011226788999999999999999887653 345555554
No 157
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.58 E-value=1.7e-14 Score=112.12 Aligned_cols=122 Identities=10% Similarity=0.031 Sum_probs=99.0
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccccc
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (224)
..++.+|||||||+|.+++.++... ..+++++|+++.+++.|++++. ..++..++.+.++|..+...
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~--------~~gl~~~I~v~~gD~l~~~~---- 86 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVR--------SSGLTEQIDVRKGNGLAVIE---- 86 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHH--------HTTCTTTEEEEECSGGGGCC----
T ss_pred CCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHH--------HcCCCceEEEEecchhhccC----
Confidence 4677899999999999999988765 4479999999999999999987 34556679999999876543
Q ss_pred CCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeC-ChHHHHHHhhhcccc
Q 027388 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP-DANVIIKKLREEHFC 222 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~-~~~~~~~~~~~~gf~ 222 (224)
+...||+|++.++-. .-...++......|+++++|+++.- ....+++.+.+.||.
T Consensus 87 -~~~~~D~IviagmGg------~lI~~IL~~~~~~L~~~~~lIlq~~~~~~~lr~~L~~~Gf~ 142 (244)
T 3gnl_A 87 -KKDAIDTIVIAGMGG------TLIRTILEEGAAKLAGVTKLILQPNIAAWQLREWSEQNNWL 142 (244)
T ss_dssp -GGGCCCEEEEEEECH------HHHHHHHHHTGGGGTTCCEEEEEESSCHHHHHHHHHHHTEE
T ss_pred -ccccccEEEEeCCch------HHHHHHHHHHHHHhCCCCEEEEEcCCChHHHHHHHHHCCCE
Confidence 223699998765432 4577889999999999999999854 568899999999985
No 158
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.58 E-value=9.7e-15 Score=121.14 Aligned_cols=119 Identities=13% Similarity=0.161 Sum_probs=88.6
Q ss_pred HHHHHhhcCCCeEEEecCCCchhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccCC--CCeeEEecccc
Q 027388 76 VLVQLYARRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFS--FPARLICGDCY 152 (224)
Q Consensus 76 ~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~--~~v~~~~~d~~ 152 (224)
++..+...++.+|||+|||+|.++..++... ..+++++|+|+.+++.+++++..+ ++. .++.++.+|+.
T Consensus 214 ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~n--------gl~~~~~v~~~~~D~~ 285 (375)
T 4dcm_A 214 FMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETN--------MPEALDRCEFMINNAL 285 (375)
T ss_dssp HHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH--------CGGGGGGEEEEECSTT
T ss_pred HHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHc--------CCCcCceEEEEechhh
Confidence 3444444556899999999999999998764 568999999999999999987632 222 24788999987
Q ss_pred ccccccccCCCCCeeEEEEccccccccC-CHHHHHHHHHHHHhhccCCeEEEEEeCC
Q 027388 153 EVHLDKVLADDAPFDICSCQFAMHYSWS-TEARARRALANVSALLRPGGTFIGTMPD 208 (224)
Q Consensus 153 ~~~~~~~~~~~~~~D~i~~~~~l~~~~~-~~~~~~~~l~~~~~~lk~gG~li~~~~~ 208 (224)
+. . +.+.||+|+++..+++... .......+++++.++|+|||.+++....
T Consensus 286 ~~-~-----~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~ 336 (375)
T 4dcm_A 286 SG-V-----EPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANR 336 (375)
T ss_dssp TT-C-----CTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEET
T ss_pred cc-C-----CCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEEC
Confidence 63 2 4579999999988774210 1223457899999999999999987554
No 159
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.57 E-value=1e-14 Score=107.49 Aligned_cols=110 Identities=13% Similarity=0.103 Sum_probs=81.0
Q ss_pred CCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCCC
Q 027388 84 RGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADD 163 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 163 (224)
++.+|||+|||+|.++..++.... .++|+|+|+.+++.|++++.. .++ +++++++|+.+.... .....
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~--------~~~--~~~~~~~d~~~~~~~-~~~~~ 108 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGW-EAVLVEKDPEAVRLLKENVRR--------TGL--GARVVALPVEVFLPE-AKAQG 108 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTC-EEEEECCCHHHHHHHHHHHHH--------HTC--CCEEECSCHHHHHHH-HHHTT
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHH--------cCC--ceEEEeccHHHHHHh-hhccC
Confidence 778999999999999999886654 499999999999999998762 222 689999998763210 00013
Q ss_pred CCeeEEEEccccccccCCHHHHHHHHHHHH--hhccCCeEEEEEeCChHH
Q 027388 164 APFDICSCQFAMHYSWSTEARARRALANVS--ALLRPGGTFIGTMPDANV 211 (224)
Q Consensus 164 ~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~--~~lk~gG~li~~~~~~~~ 211 (224)
++||+|+++.+++ - . ...++..+. ++|+|||++++.++....
T Consensus 109 ~~~D~i~~~~~~~-~--~---~~~~~~~~~~~~~L~~gG~~~~~~~~~~~ 152 (171)
T 1ws6_A 109 ERFTVAFMAPPYA-M--D---LAALFGELLASGLVEAGGLYVLQHPKDLY 152 (171)
T ss_dssp CCEEEEEECCCTT-S--C---TTHHHHHHHHHTCEEEEEEEEEEEETTSC
T ss_pred CceEEEEECCCCc-h--h---HHHHHHHHHhhcccCCCcEEEEEeCCccC
Confidence 4899999987664 1 1 123444444 999999999998876543
No 160
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.57 E-value=2.7e-14 Score=112.13 Aligned_cols=110 Identities=14% Similarity=0.109 Sum_probs=86.5
Q ss_pred hhcCCCeEEEecCCCchhHHHHHhhc--CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccc
Q 027388 81 YARRGDVVLDLACGKGGDLIKWDKAK--IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK 158 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~G~~~~~l~~~~--~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 158 (224)
...++.+|||||||+|..+..++... ..+++++|+|+.+++.|++++. ..++..++.++++|+.+....
T Consensus 60 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~--------~~g~~~~v~~~~~d~~~~l~~- 130 (248)
T 3tfw_A 60 RLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQ--------LAGVDQRVTLREGPALQSLES- 130 (248)
T ss_dssp HHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHH--------HTTCTTTEEEEESCHHHHHHT-
T ss_pred hhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH--------HcCCCCcEEEEEcCHHHHHHh-
Confidence 34578999999999999999988652 5699999999999999999986 335556799999998763211
Q ss_pred ccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeC
Q 027388 159 VLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (224)
Q Consensus 159 ~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~ 207 (224)
. ...++||+|++.... .....++..+.++|+|||+|++...
T Consensus 131 ~-~~~~~fD~V~~d~~~-------~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 131 L-GECPAFDLIFIDADK-------PNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp C-CSCCCCSEEEECSCG-------GGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred c-CCCCCeEEEEECCch-------HHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 0 023589999986643 4456799999999999999998744
No 161
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.57 E-value=1e-14 Score=116.23 Aligned_cols=124 Identities=19% Similarity=0.218 Sum_probs=96.9
Q ss_pred HHHHHhhcCCCeEEEecCCCchhHHHHHhh-c-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccc
Q 027388 76 VLVQLYARRGDVVLDLACGKGGDLIKWDKA-K-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYE 153 (224)
Q Consensus 76 ~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~-~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~ 153 (224)
++......++.+|||+|||+|.++..++.. . ..+++++|+|+.+++.|++++.. .++..++.++++|+.+
T Consensus 104 i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~--------~~~~~~v~~~~~d~~~ 175 (277)
T 1o54_A 104 IAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTK--------WGLIERVTIKVRDISE 175 (277)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHH--------TTCGGGEEEECCCGGG
T ss_pred HHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHH--------cCCCCCEEEEECCHHH
Confidence 334445667889999999999999998876 3 56999999999999999998762 2333468999999876
Q ss_pred cccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCCh---HHHHHHhhhcccc
Q 027388 154 VHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDA---NVIIKKLREEHFC 222 (224)
Q Consensus 154 ~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~---~~~~~~~~~~gf~ 222 (224)
. + +.+.||+|+++. +++..++..+.++|+|||.+++..+.. ..+.+.+++.||.
T Consensus 176 ~-~-----~~~~~D~V~~~~---------~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~gf~ 232 (277)
T 1o54_A 176 G-F-----DEKDVDALFLDV---------PDPWNYIDKCWEALKGGGRFATVCPTTNQVQETLKKLQELPFI 232 (277)
T ss_dssp C-C-----SCCSEEEEEECC---------SCGGGTHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHSSEE
T ss_pred c-c-----cCCccCEEEECC---------cCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCc
Confidence 5 3 356899999843 233578899999999999999998864 3566677778874
No 162
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.57 E-value=2.7e-14 Score=117.48 Aligned_cols=104 Identities=18% Similarity=0.172 Sum_probs=81.0
Q ss_pred hhcCCCeEEEecCCCchhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccc
Q 027388 81 YARRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKV 159 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 159 (224)
...++.+|||||||+|.++..+++.. ..+++++|++ .++. +++.. ..+...+++++.+|+. .+.
T Consensus 181 ~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~--~~~~~--------~~~~~~~v~~~~~d~~-~~~--- 245 (348)
T 3lst_A 181 DFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRA-EVVA--RHRLD--------APDVAGRWKVVEGDFL-REV--- 245 (348)
T ss_dssp CCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECH-HHHT--TCCCC--------CGGGTTSEEEEECCTT-TCC---
T ss_pred CccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCH-HHhh--ccccc--------ccCCCCCeEEEecCCC-CCC---
Confidence 34567899999999999999988653 3478999994 4444 33322 2344567999999986 333
Q ss_pred cCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 160 LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 160 ~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
+ +||+|++..++|++ +.++...++++++++|||||+|++.
T Consensus 246 --p--~~D~v~~~~vlh~~--~d~~~~~~L~~~~~~LkpgG~l~i~ 285 (348)
T 3lst_A 246 --P--HADVHVLKRILHNW--GDEDSVRILTNCRRVMPAHGRVLVI 285 (348)
T ss_dssp --C--CCSEEEEESCGGGS--CHHHHHHHHHHHHHTCCTTCEEEEE
T ss_pred --C--CCcEEEEehhccCC--CHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 3 89999999999988 5666689999999999999999885
No 163
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.57 E-value=2.4e-14 Score=109.00 Aligned_cols=101 Identities=16% Similarity=0.134 Sum_probs=81.9
Q ss_pred CCCeEEEecCCCchhHHHHHhh-cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCC
Q 027388 84 RGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~~-~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (224)
++.+|||+|||+|.++..++.. ...+++++|+|+.+++.+++++.. .++. ++.++++|+.+.. +
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~--------~~~~-~v~~~~~d~~~~~------~ 129 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHE--------LKLE-NIEPVQSRVEEFP------S 129 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHH--------TTCS-SEEEEECCTTTSC------C
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHH--------cCCC-CeEEEecchhhCC------c
Confidence 4789999999999999998865 356999999999999999998762 2222 3899999997754 2
Q ss_pred CCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeC
Q 027388 163 DAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (224)
Q Consensus 163 ~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~ 207 (224)
.++||+|++..+ .+...++..+.++|+|||.+++...
T Consensus 130 ~~~~D~i~~~~~--------~~~~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 130 EPPFDGVISRAF--------ASLNDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp CSCEEEEECSCS--------SSHHHHHHHHTTSEEEEEEEEEEES
T ss_pred cCCcCEEEEecc--------CCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 478999997542 2356899999999999999998754
No 164
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.57 E-value=9.2e-15 Score=120.06 Aligned_cols=117 Identities=15% Similarity=0.229 Sum_probs=89.9
Q ss_pred HHHHHhhcCCCeEEEecCCCchhHHHHHhhcC-CeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccc
Q 027388 76 VLVQLYARRGDVVLDLACGKGGDLIKWDKAKI-GYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV 154 (224)
Q Consensus 76 ~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~-~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~ 154 (224)
++..+....+.+|||+|||+|.++..++.... .+++++|+|+.+++.+++++... ...+.++.+|+...
T Consensus 188 ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~----------~~~~~~~~~d~~~~ 257 (343)
T 2pjd_A 188 LLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAAN----------GVEGEVFASNVFSE 257 (343)
T ss_dssp HHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHT----------TCCCEEEECSTTTT
T ss_pred HHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHh----------CCCCEEEEcccccc
Confidence 34443344577999999999999999887654 48999999999999999987621 22356788887653
Q ss_pred ccccccCCCCCeeEEEEccccccccC-CHHHHHHHHHHHHhhccCCeEEEEEeCCh
Q 027388 155 HLDKVLADDAPFDICSCQFAMHYSWS-TEARARRALANVSALLRPGGTFIGTMPDA 209 (224)
Q Consensus 155 ~~~~~~~~~~~~D~i~~~~~l~~~~~-~~~~~~~~l~~~~~~lk~gG~li~~~~~~ 209 (224)
. .++||+|+++.++++... ...+...+++++.++|+|||.+++.....
T Consensus 258 ~-------~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 306 (343)
T 2pjd_A 258 V-------KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAF 306 (343)
T ss_dssp C-------CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEETT
T ss_pred c-------cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCC
Confidence 2 468999999998875210 23567899999999999999999986543
No 165
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.57 E-value=1.5e-14 Score=119.30 Aligned_cols=133 Identities=22% Similarity=0.292 Sum_probs=91.1
Q ss_pred HHHHHHHHHhhhccccchhhhccCCceehhhhHHHHHHHHHHHhhcCCCeEEEecCC------CchhHHHHHhh--cCCe
Q 027388 38 VFARKVADHYSRRTNQTLEEREASPIIHLKKLNNWIKSVLVQLYARRGDVVLDLACG------KGGDLIKWDKA--KIGY 109 (224)
Q Consensus 38 ~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iLDiGcG------~G~~~~~l~~~--~~~~ 109 (224)
..|++++..|....... ...+..+.+.++..+ ..++.+||||||| +|..+..++.. ...+
T Consensus 182 ~~fd~lA~~Y~tDK~~~-----------~h~y~~~Ye~lL~~l-~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~ 249 (419)
T 3sso_A 182 PDLSELSSRYFTPKFGF-----------LHWFTPHYDRHFRDY-RNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQ 249 (419)
T ss_dssp CCHHHHHHHTTCTTBSS-----------SCBCHHHHHHHHGGG-TTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCE
T ss_pred ccHHHHHHHhCCCcccc-----------cchHHHHHHHHHHhh-cCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCE
Confidence 46777777775322220 122333344444332 3467899999999 66677766654 3568
Q ss_pred EEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccccc-CCCCCeeEEEEccccccccCCHHHHHHH
Q 027388 110 YVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL-ADDAPFDICSCQFAMHYSWSTEARARRA 188 (224)
Q Consensus 110 ~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-~~~~~~D~i~~~~~l~~~~~~~~~~~~~ 188 (224)
++|+|+|+.|. .. ..+++++++|+.+++..... ...++||+|++..+ ++. .+...+
T Consensus 250 V~GVDiSp~m~------~~------------~~rI~fv~GDa~dlpf~~~l~~~d~sFDlVisdgs-H~~----~d~~~a 306 (419)
T 3sso_A 250 IYGLDIMDKSH------VD------------ELRIRTIQGDQNDAEFLDRIARRYGPFDIVIDDGS-HIN----AHVRTS 306 (419)
T ss_dssp EEEEESSCCGG------GC------------BTTEEEEECCTTCHHHHHHHHHHHCCEEEEEECSC-CCH----HHHHHH
T ss_pred EEEEECCHHHh------hc------------CCCcEEEEecccccchhhhhhcccCCccEEEECCc-ccc----hhHHHH
Confidence 99999999872 11 34699999999887652000 01478999998754 544 788999
Q ss_pred HHHHHhhccCCeEEEEE
Q 027388 189 LANVSALLRPGGTFIGT 205 (224)
Q Consensus 189 l~~~~~~lk~gG~li~~ 205 (224)
|++++++|||||++++.
T Consensus 307 L~el~rvLKPGGvlVi~ 323 (419)
T 3sso_A 307 FAALFPHVRPGGLYVIE 323 (419)
T ss_dssp HHHHGGGEEEEEEEEEE
T ss_pred HHHHHHhcCCCeEEEEE
Confidence 99999999999999996
No 166
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.57 E-value=2.2e-14 Score=114.35 Aligned_cols=125 Identities=20% Similarity=0.246 Sum_probs=95.7
Q ss_pred HHHHHhhcCCCeEEEecCCCchhHHHHHhh--cCCeEEEEeCChhHHHHHHHhccCCcccccccc--cCCCCeeEEeccc
Q 027388 76 VLVQLYARRGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRK--KFSFPARLICGDC 151 (224)
Q Consensus 76 ~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~--~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~--~~~~~v~~~~~d~ 151 (224)
++..+...++.+|||+|||+|.++..++.. ...+++++|+++.+++.|++++.. . .+..++.+.++|+
T Consensus 91 i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~--------~~g~~~~~v~~~~~d~ 162 (280)
T 1i9g_A 91 IVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSG--------CYGQPPDNWRLVVSDL 162 (280)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHH--------HHTSCCTTEEEECSCG
T ss_pred HHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHH--------hcCCCCCcEEEEECch
Confidence 444445678889999999999999998864 256999999999999999998751 1 1234689999999
Q ss_pred cccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCChHHHH---HHhhh-cccc
Q 027388 152 YEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVII---KKLRE-EHFC 222 (224)
Q Consensus 152 ~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~~~~~---~~~~~-~gf~ 222 (224)
.+.+. +.+.||+|++... ++..++.++.++|+|||.+++.+++...+. ..+++ .+|.
T Consensus 163 ~~~~~-----~~~~~D~v~~~~~---------~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~~~f~ 223 (280)
T 1i9g_A 163 ADSEL-----PDGSVDRAVLDML---------APWEVLDAVSRLLVAGGVLMVYVATVTQLSRIVEALRAKQCWT 223 (280)
T ss_dssp GGCCC-----CTTCEEEEEEESS---------CGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHHSSBC
T ss_pred HhcCC-----CCCceeEEEECCc---------CHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcCCcC
Confidence 87654 4578999998431 234789999999999999999999865443 44554 4554
No 167
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.56 E-value=4.4e-14 Score=117.28 Aligned_cols=126 Identities=16% Similarity=0.169 Sum_probs=98.0
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhcC-CeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccccc
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAKI-GYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~~-~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (224)
..++.+|||+|||+|.++..++.... .+++|+|+|+.+++.|++++. ..++..++.+.++|+.+++.
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~--------~~gl~~~i~~~~~D~~~~~~---- 282 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNAL--------AAGVLDKIKFIQGDATQLSQ---- 282 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHH--------HTTCGGGCEEEECCGGGGGG----
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHH--------HcCCCCceEEEECChhhCCc----
Confidence 56788999999999999999886543 489999999999999999986 23444579999999998875
Q ss_pred CCCCCeeEEEEccccccccC---CHH-HHHHHHHHHHhhccCCeEEEEEeCChHHHHHHhhhcccc
Q 027388 161 ADDAPFDICSCQFAMHYSWS---TEA-RARRALANVSALLRPGGTFIGTMPDANVIIKKLREEHFC 222 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~~~---~~~-~~~~~l~~~~~~lk~gG~li~~~~~~~~~~~~~~~~gf~ 222 (224)
+.++||+|+++..++..+. ... ....++..+.++| ||.+++.+++...+.+.+.+.||.
T Consensus 283 -~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~~~~~~~~~~~~~G~~ 345 (373)
T 3tm4_A 283 -YVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITTEKKAIEEAIAENGFE 345 (373)
T ss_dssp -TCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEESCHHHHHHHHHHTTEE
T ss_pred -ccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEECCHHHHHHHHHHcCCE
Confidence 4578999999866443211 112 2377888899988 677777788888888888888874
No 168
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.56 E-value=2.8e-14 Score=115.99 Aligned_cols=113 Identities=16% Similarity=0.216 Sum_probs=88.8
Q ss_pred HHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcC--CeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecc
Q 027388 73 IKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKI--GYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGD 150 (224)
Q Consensus 73 ~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~--~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d 150 (224)
...++..+...++.+|||||||+|.++..++.... .+|+++|+|+.+++.|++++.. .++. ++.+.++|
T Consensus 64 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~--------~g~~-~v~~~~~d 134 (317)
T 1dl5_A 64 MALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVER--------LGIE-NVIFVCGD 134 (317)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHH--------TTCC-SEEEEESC
T ss_pred HHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHH--------cCCC-CeEEEECC
Confidence 34445555667889999999999999998876532 4699999999999999998762 2223 38999999
Q ss_pred ccccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCCh
Q 027388 151 CYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDA 209 (224)
Q Consensus 151 ~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~ 209 (224)
+.+... ..++||+|++..+++++ . ..+.+.|+|||++++.....
T Consensus 135 ~~~~~~-----~~~~fD~Iv~~~~~~~~--~--------~~~~~~LkpgG~lvi~~~~~ 178 (317)
T 1dl5_A 135 GYYGVP-----EFSPYDVIFVTVGVDEV--P--------ETWFTQLKEGGRVIVPINLK 178 (317)
T ss_dssp GGGCCG-----GGCCEEEEEECSBBSCC--C--------HHHHHHEEEEEEEEEEBCBG
T ss_pred hhhccc-----cCCCeEEEEEcCCHHHH--H--------HHHHHhcCCCcEEEEEECCC
Confidence 876443 24789999999999987 2 46788999999999986543
No 169
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.56 E-value=2.7e-14 Score=119.87 Aligned_cols=119 Identities=13% Similarity=0.180 Sum_probs=88.2
Q ss_pred HHHHHHHHHHhhcCCCeEEEecCCCchhHHHHHhh-cCCeEEEEeCChhHHHHH-------HHhccCCcccccccccCC-
Q 027388 71 NWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDC-------RTRYNGDADHHQRRKKFS- 141 (224)
Q Consensus 71 ~~~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~-~~~~~~gvD~s~~~~~~a-------~~~~~~~~~~~~~~~~~~- 141 (224)
.++..++..+...++.+|||||||+|.++..++.. +..+++|||+++.+++.| ++++.. .++.
T Consensus 229 ~~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~--------~Gl~~ 300 (433)
T 1u2z_A 229 NFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKL--------YGMRL 300 (433)
T ss_dssp HHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHH--------TTBCC
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHH--------cCCCC
Confidence 34555555556678899999999999999998875 445799999999999988 766541 2221
Q ss_pred CCeeEEecccccc--ccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 142 FPARLICGDCYEV--HLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 142 ~~v~~~~~d~~~~--~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
.++.++++|.... ++.. ..+.||+|+++.++. . ++...++.++.+.|+|||.|++.
T Consensus 301 ~nV~~i~gD~~~~~~~~~~---~~~~FDvIvvn~~l~-~----~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 301 NNVEFSLKKSFVDNNRVAE---LIPQCDVILVNNFLF-D----EDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp CCEEEEESSCSTTCHHHHH---HGGGCSEEEECCTTC-C----HHHHHHHHHHHTTCCTTCEEEES
T ss_pred CceEEEEcCcccccccccc---ccCCCCEEEEeCccc-c----ccHHHHHHHHHHhCCCCeEEEEe
Confidence 4688888764321 1100 136899999876662 2 67888899999999999999986
No 170
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.56 E-value=1.1e-14 Score=114.44 Aligned_cols=122 Identities=11% Similarity=0.061 Sum_probs=83.1
Q ss_pred CCCeEEEecCCCchhHHHHHhh---cCCeEEEEeCChhHHHHHHHhccCC---cccccc-----------------cccC
Q 027388 84 RGDVVLDLACGKGGDLIKWDKA---KIGYYVGIDIAEGSIEDCRTRYNGD---ADHHQR-----------------RKKF 140 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~~---~~~~~~gvD~s~~~~~~a~~~~~~~---~~~~~~-----------------~~~~ 140 (224)
++.+|||+|||+|.++..++.. ...+++|+|+|+.+++.|++++... +..+.. ....
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 5679999999999999988765 2458999999999999999887632 110000 0000
Q ss_pred CCCee-------------EEeccccccccccccCCCCCeeEEEEccccccccC-----CHHHHHHHHHHHHhhccCCeEE
Q 027388 141 SFPAR-------------LICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWS-----TEARARRALANVSALLRPGGTF 202 (224)
Q Consensus 141 ~~~v~-------------~~~~d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~-----~~~~~~~~l~~~~~~lk~gG~l 202 (224)
..++. +.++|+.+............||+|+++..+.+... .......++.++.++|+|||++
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 210 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVI 210 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEE
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEE
Confidence 00045 88999876321000001248999999876655421 1467789999999999999999
Q ss_pred EEE
Q 027388 203 IGT 205 (224)
Q Consensus 203 i~~ 205 (224)
++.
T Consensus 211 ~~~ 213 (250)
T 1o9g_A 211 AVT 213 (250)
T ss_dssp EEE
T ss_pred EEe
Confidence 984
No 171
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.55 E-value=4e-14 Score=109.10 Aligned_cols=112 Identities=16% Similarity=0.142 Sum_probs=86.1
Q ss_pred hhcCCCeEEEecCCCchhHHHHHhhc--CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccc
Q 027388 81 YARRGDVVLDLACGKGGDLIKWDKAK--IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK 158 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~G~~~~~l~~~~--~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 158 (224)
...++.+|||||||+|..+..++... ..+++++|+++.+++.|++++. ..++..+++++++|+.+.....
T Consensus 55 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~--------~~~~~~~v~~~~~d~~~~~~~~ 126 (223)
T 3duw_A 55 QIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIE--------RANLNDRVEVRTGLALDSLQQI 126 (223)
T ss_dssp HHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHH--------HTTCTTTEEEEESCHHHHHHHH
T ss_pred HhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH--------HcCCCCcEEEEEcCHHHHHHHH
Confidence 34578899999999999999988653 5699999999999999999876 3345557999999986542100
Q ss_pred ccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeC
Q 027388 159 VLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (224)
Q Consensus 159 ~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~ 207 (224)
.....+.||+|++.... .....++..+.++|+|||++++...
T Consensus 127 ~~~~~~~fD~v~~d~~~-------~~~~~~l~~~~~~L~pgG~lv~~~~ 168 (223)
T 3duw_A 127 ENEKYEPFDFIFIDADK-------QNNPAYFEWALKLSRPGTVIIGDNV 168 (223)
T ss_dssp HHTTCCCCSEEEECSCG-------GGHHHHHHHHHHTCCTTCEEEEESC
T ss_pred HhcCCCCcCEEEEcCCc-------HHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 00012679999987653 3456899999999999999998744
No 172
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.55 E-value=4.8e-14 Score=110.25 Aligned_cols=115 Identities=17% Similarity=0.196 Sum_probs=90.1
Q ss_pred HHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccc
Q 027388 77 LVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHL 156 (224)
Q Consensus 77 ~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 156 (224)
+......++.+|||+|||+|.++..++.. ..+++++|+++.+++.|++++.. .++..++.+..+|+.+...
T Consensus 84 ~~~~~~~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~--------~~~~~~~~~~~~d~~~~~~ 154 (248)
T 2yvl_A 84 ALKLNLNKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKK--------FNLGKNVKFFNVDFKDAEV 154 (248)
T ss_dssp HHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHH--------TTCCTTEEEECSCTTTSCC
T ss_pred HHhcCCCCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHH--------cCCCCcEEEEEcChhhccc
Confidence 33445567889999999999999998877 67999999999999999998762 2334568999999876432
Q ss_pred ccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCChHHHHH
Q 027388 157 DKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVIIK 214 (224)
Q Consensus 157 ~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~~~~~~ 214 (224)
....||+|++.. .++..++..+.++|+|||.+++..++...+.+
T Consensus 155 -----~~~~~D~v~~~~---------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~ 198 (248)
T 2yvl_A 155 -----PEGIFHAAFVDV---------REPWHYLEKVHKSLMEGAPVGFLLPTANQVIK 198 (248)
T ss_dssp -----CTTCBSEEEECS---------SCGGGGHHHHHHHBCTTCEEEEEESSHHHHHH
T ss_pred -----CCCcccEEEECC---------cCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHH
Confidence 246899999742 23457889999999999999999997644433
No 173
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.55 E-value=3.7e-14 Score=110.13 Aligned_cols=109 Identities=19% Similarity=0.232 Sum_probs=85.9
Q ss_pred hhcCCCeEEEecCCCchhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccc
Q 027388 81 YARRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKV 159 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 159 (224)
...++.+|||+|||+|..+..++... ..+++++|+++.+++.|++++. ..++..++.++++|+.+.... .
T Consensus 51 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~--------~~~~~~~v~~~~~d~~~~~~~-~ 121 (233)
T 2gpy_A 51 KMAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVK--------ALGLESRIELLFGDALQLGEK-L 121 (233)
T ss_dssp HHHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHH--------HTTCTTTEEEECSCGGGSHHH-H
T ss_pred hccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH--------HcCCCCcEEEEECCHHHHHHh-c
Confidence 34578899999999999999888653 5699999999999999999876 233445689999998764211 0
Q ss_pred cCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEe
Q 027388 160 LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (224)
Q Consensus 160 ~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~ 206 (224)
...+.||+|++..... +...++..+.++|+|||++++..
T Consensus 122 -~~~~~fD~I~~~~~~~-------~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 122 -ELYPLFDVLFIDAAKG-------QYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp -TTSCCEEEEEEEGGGS-------CHHHHHHHHGGGEEEEEEEEEET
T ss_pred -ccCCCccEEEECCCHH-------HHHHHHHHHHHHcCCCeEEEEEc
Confidence 0146899999877643 45789999999999999999974
No 174
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.55 E-value=4e-14 Score=110.12 Aligned_cols=112 Identities=15% Similarity=0.149 Sum_probs=86.3
Q ss_pred HHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccc
Q 027388 74 KSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYE 153 (224)
Q Consensus 74 ~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~ 153 (224)
..++..+...++.+|||||||+|.++..++.....+++++|+++.+++.|++++.. .++. ++.+..+|+ .
T Consensus 81 ~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~--------~~~~-~v~~~~~d~-~ 150 (235)
T 1jg1_A 81 AIMLEIANLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLER--------AGVK-NVHVILGDG-S 150 (235)
T ss_dssp HHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHH--------TTCC-SEEEEESCG-G
T ss_pred HHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHH--------cCCC-CcEEEECCc-c
Confidence 33444455677889999999999999988865437999999999999999998762 1222 488999997 2
Q ss_pred cccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCCh
Q 027388 154 VHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDA 209 (224)
Q Consensus 154 ~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~ 209 (224)
.+.. ...+||+|++..+++++ . ..+.+.|+|||++++.+++.
T Consensus 151 ~~~~----~~~~fD~Ii~~~~~~~~--~--------~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 151 KGFP----PKAPYDVIIVTAGAPKI--P--------EPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp GCCG----GGCCEEEEEECSBBSSC--C--------HHHHHTEEEEEEEEEEECSS
T ss_pred cCCC----CCCCccEEEECCcHHHH--H--------HHHHHhcCCCcEEEEEEecC
Confidence 2221 23469999999998876 2 26789999999999998764
No 175
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.54 E-value=3.7e-14 Score=109.42 Aligned_cols=111 Identities=16% Similarity=0.121 Sum_probs=85.2
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhc--CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccc
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAK--IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKV 159 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~--~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 159 (224)
..++.+|||||||+|..+..++... ..+++++|+++.+++.|++++. ..++..++.++++|+.+......
T Consensus 62 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~--------~~~~~~~v~~~~~d~~~~~~~~~ 133 (225)
T 3tr6_A 62 LMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWE--------KAGLSDKIGLRLSPAKDTLAELI 133 (225)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHH--------HTTCTTTEEEEESCHHHHHHHHH
T ss_pred hhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHH--------HCCCCCceEEEeCCHHHHHHHhh
Confidence 3577899999999999999988652 5799999999999999999986 33455569999999865421000
Q ss_pred -cCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeC
Q 027388 160 -LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (224)
Q Consensus 160 -~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~ 207 (224)
....++||+|++.... .....++..+.++|+|||+|++...
T Consensus 134 ~~~~~~~fD~v~~~~~~-------~~~~~~l~~~~~~L~pgG~lv~~~~ 175 (225)
T 3tr6_A 134 HAGQAWQYDLIYIDADK-------ANTDLYYEESLKLLREGGLIAVDNV 175 (225)
T ss_dssp TTTCTTCEEEEEECSCG-------GGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred hccCCCCccEEEECCCH-------HHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 0011789999976542 4567799999999999999998643
No 176
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.54 E-value=1.5e-14 Score=126.22 Aligned_cols=106 Identities=22% Similarity=0.245 Sum_probs=80.8
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccC
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (224)
...+.+|||||||+|.++..+++. +..|+|||+|+.+++.|+.++...+ ..++.|.+++++++....
T Consensus 64 ~~~~~~vLDvGCG~G~~~~~la~~-ga~V~giD~~~~~i~~a~~~a~~~~---------~~~~~~~~~~~~~~~~~~--- 130 (569)
T 4azs_A 64 LGRPLNVLDLGCAQGFFSLSLASK-GATIVGIDFQQENINVCRALAEENP---------DFAAEFRVGRIEEVIAAL--- 130 (569)
T ss_dssp HTSCCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTST---------TSEEEEEECCHHHHHHHC---
T ss_pred cCCCCeEEEECCCCcHHHHHHHhC-CCEEEEECCCHHHHHHHHHHHHhcC---------CCceEEEECCHHHHhhhc---
Confidence 356789999999999999999865 4589999999999999999876321 235899999998763210
Q ss_pred CCCCeeEEEEccccccccCCHHHHH--HHHHHHHhhccCCeEEEE
Q 027388 162 DDAPFDICSCQFAMHYSWSTEARAR--RALANVSALLRPGGTFIG 204 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~~~~~~~~~~~--~~l~~~~~~lk~gG~li~ 204 (224)
.+++||+|+|..+++|+ .++. ..+..+.+.|+++|..++
T Consensus 131 ~~~~fD~v~~~e~~ehv----~~~~~~~~~~~~~~tl~~~~~~~~ 171 (569)
T 4azs_A 131 EEGEFDLAIGLSVFHHI----VHLHGIDEVKRLLSRLADVTQAVI 171 (569)
T ss_dssp CTTSCSEEEEESCHHHH----HHHHCHHHHHHHHHHHHHHSSEEE
T ss_pred cCCCccEEEECcchhcC----CCHHHHHHHHHHHHHhccccceee
Confidence 35789999999999998 4433 334566777777664443
No 177
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.53 E-value=8.7e-14 Score=107.42 Aligned_cols=104 Identities=22% Similarity=0.275 Sum_probs=82.6
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhc-C-CeEEEEeCChhHHHHHHHhccCCcccccccccC----CCCeeEEeccccccc
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAK-I-GYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKF----SFPARLICGDCYEVH 155 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~-~-~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~----~~~v~~~~~d~~~~~ 155 (224)
..++.+|||+|||+|..+..++... . .+++++|+|+.+++.+++++.. .+. ..++.++++|+....
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~--------~~~~~~~~~~v~~~~~d~~~~~ 146 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRK--------DDPTLLSSGRVQLVVGDGRMGY 146 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHH--------HCTHHHHTSSEEEEESCGGGCC
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHh--------hcccccCCCcEEEEECCcccCc
Confidence 5678899999999999999887652 2 5899999999999999988752 111 235899999987543
Q ss_pred cccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCC
Q 027388 156 LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (224)
Q Consensus 156 ~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~ 208 (224)
. ..++||+|++...++++ +..+.+.|+|||++++.++.
T Consensus 147 ~-----~~~~fD~i~~~~~~~~~----------~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 147 A-----EEAPYDAIHVGAAAPVV----------PQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp G-----GGCCEEEEEECSBBSSC----------CHHHHHTEEEEEEEEEEESC
T ss_pred c-----cCCCcCEEEECCchHHH----------HHHHHHhcCCCcEEEEEEec
Confidence 3 35689999999888765 25788999999999998764
No 178
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.53 E-value=6.1e-14 Score=108.38 Aligned_cols=105 Identities=15% Similarity=0.166 Sum_probs=83.6
Q ss_pred hhcCCCeEEEecCCCchhHHHHHhhcC------CeEEEEeCChhHHHHHHHhccCCcccccccccC----CCCeeEEecc
Q 027388 81 YARRGDVVLDLACGKGGDLIKWDKAKI------GYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKF----SFPARLICGD 150 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~G~~~~~l~~~~~------~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~----~~~v~~~~~d 150 (224)
...++.+|||||||+|.++..++.... .+++++|+++.+++.|++++.. .++ ..++.++++|
T Consensus 77 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~--------~~~~~~~~~~v~~~~~d 148 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKR--------DKPELLKIDNFKIIHKN 148 (227)
T ss_dssp TSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHH--------HCGGGGSSTTEEEEECC
T ss_pred hCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHH--------cCccccccCCEEEEECC
Confidence 356788999999999999998876543 5899999999999999998762 121 2368999999
Q ss_pred ccccc----cccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCC
Q 027388 151 CYEVH----LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (224)
Q Consensus 151 ~~~~~----~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~ 208 (224)
+.... . ..++||+|++..+++++ +..+.+.|+|||++++..+.
T Consensus 149 ~~~~~~~~~~-----~~~~fD~I~~~~~~~~~----------~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 149 IYQVNEEEKK-----ELGLFDAIHVGASASEL----------PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp GGGCCHHHHH-----HHCCEEEEEECSBBSSC----------CHHHHHHEEEEEEEEEEEEE
T ss_pred hHhcccccCc-----cCCCcCEEEECCchHHH----------HHHHHHhcCCCcEEEEEEcc
Confidence 87643 2 24689999999988765 36788999999999998763
No 179
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.53 E-value=9.2e-14 Score=113.76 Aligned_cols=129 Identities=19% Similarity=0.252 Sum_probs=90.2
Q ss_pred HHHHHhhcCCCeEEEecCCCchhHHHHHhh-cC-CeEEEEeCChhHHHHHHHhccCCcc---cccccccCCCCeeEEecc
Q 027388 76 VLVQLYARRGDVVLDLACGKGGDLIKWDKA-KI-GYYVGIDIAEGSIEDCRTRYNGDAD---HHQRRKKFSFPARLICGD 150 (224)
Q Consensus 76 ~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~-~~-~~~~gvD~s~~~~~~a~~~~~~~~~---~~~~~~~~~~~v~~~~~d 150 (224)
++..+...++.+|||+|||+|.++..++.. +. .+++++|+++.+++.|++++...+. .| .......++.+.++|
T Consensus 97 ~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln-~~~~~~~~v~~~~~d 175 (336)
T 2b25_A 97 ILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLS-HVEEWPDNVDFIHKD 175 (336)
T ss_dssp HHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTT-CSSCCCCCEEEEESC
T ss_pred HHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccc-cccccCCceEEEECC
Confidence 344445678899999999999999998865 33 7899999999999999998752100 00 000123569999999
Q ss_pred ccccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCChHHHHHHhh
Q 027388 151 CYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVIIKKLR 217 (224)
Q Consensus 151 ~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~~~~~~~~~ 217 (224)
+.+.... . +.+.||+|++..... ..++..+.++|+|||.|++..++...+.+.+.
T Consensus 176 ~~~~~~~-~--~~~~fD~V~~~~~~~---------~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~ 230 (336)
T 2b25_A 176 ISGATED-I--KSLTFDAVALDMLNP---------HVTLPVFYPHLKHGGVCAVYVVNITQVIELLD 230 (336)
T ss_dssp TTCCC----------EEEEEECSSST---------TTTHHHHGGGEEEEEEEEEEESSHHHHHHHHH
T ss_pred hHHcccc-c--CCCCeeEEEECCCCH---------HHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH
Confidence 8875210 0 346799999864322 23789999999999999999988766555443
No 180
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.52 E-value=9.3e-14 Score=109.53 Aligned_cols=126 Identities=12% Similarity=0.093 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHhh-cCCCeEEEecCCC--chhHHHHHhh--cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCe
Q 027388 70 NNWIKSVLVQLYA-RRGDVVLDLACGK--GGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPA 144 (224)
Q Consensus 70 ~~~~~~~~~~~~~-~~~~~iLDiGcG~--G~~~~~l~~~--~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v 144 (224)
+.|+.+.+..+.. .....|||||||+ +.++..++.. ...+|++||.|+.|++.|++++... ...++
T Consensus 63 r~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~---------~~~~~ 133 (277)
T 3giw_A 63 RDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLAST---------PEGRT 133 (277)
T ss_dssp HHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCC---------SSSEE
T ss_pred HHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccC---------CCCcE
Confidence 4566666665543 3447899999997 4455555442 4568999999999999999988621 12358
Q ss_pred eEEecccccccc--ccccCCCCCee-----EEEEccccccccCCHHH-HHHHHHHHHhhccCCeEEEEEeC
Q 027388 145 RLICGDCYEVHL--DKVLADDAPFD-----ICSCQFAMHYSWSTEAR-ARRALANVSALLRPGGTFIGTMP 207 (224)
Q Consensus 145 ~~~~~d~~~~~~--~~~~~~~~~~D-----~i~~~~~l~~~~~~~~~-~~~~l~~~~~~lk~gG~li~~~~ 207 (224)
.|+++|+.+... .... ....|| .|+++.+|||+ +..+ +..+++++.+.|+|||+|++++.
T Consensus 134 ~~v~aD~~~~~~~l~~~~-~~~~~D~~~p~av~~~avLH~l--~d~~~p~~~l~~l~~~L~PGG~Lvls~~ 201 (277)
T 3giw_A 134 AYVEADMLDPASILDAPE-LRDTLDLTRPVALTVIAIVHFV--LDEDDAVGIVRRLLEPLPSGSYLAMSIG 201 (277)
T ss_dssp EEEECCTTCHHHHHTCHH-HHTTCCTTSCCEEEEESCGGGS--CGGGCHHHHHHHHHTTSCTTCEEEEEEE
T ss_pred EEEEecccChhhhhcccc-cccccCcCCcchHHhhhhHhcC--CchhhHHHHHHHHHHhCCCCcEEEEEec
Confidence 999999987531 0000 012344 58889999998 3322 68899999999999999999843
No 181
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.52 E-value=1.2e-13 Score=108.17 Aligned_cols=133 Identities=15% Similarity=0.222 Sum_probs=88.4
Q ss_pred cCCCeEEEecCCCchhHHHHHhhcC-CeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccc-ccccccc
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKAKI-GYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYE-VHLDKVL 160 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~~~-~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~ 160 (224)
.++.+|||||||+|.++..++.... ..++|||+|+.+++.+++++......+....++ .++.++++|+.+ ++. .
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~-~nv~~~~~D~~~~l~~---~ 123 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGF-QNINVLRGNAMKFLPN---F 123 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTT-TTEEEEECCTTSCGGG---T
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCC-CcEEEEeccHHHHHHH---h
Confidence 4678999999999999999987653 489999999999999988765210000000022 369999999876 331 1
Q ss_pred CCCCCeeEEEEccccccccCCHH-----HHHHHHHHHHhhccCCeEEEEEeCChH---HHHHHhhhcc
Q 027388 161 ADDAPFDICSCQFAMHYSWSTEA-----RARRALANVSALLRPGGTFIGTMPDAN---VIIKKLREEH 220 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~~~~~~-----~~~~~l~~~~~~lk~gG~li~~~~~~~---~~~~~~~~~g 220 (224)
...+.+|.|+....--+. .... ....++..+.++|+|||.|++.+.+.. .+.+.+.+.+
T Consensus 124 ~~~~~~d~v~~~~p~p~~-k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~ 190 (246)
T 2vdv_E 124 FEKGQLSKMFFCFPDPHF-KQRKHKARIITNTLLSEYAYVLKEGGVVYTITDVKDLHEWMVKHLEEHP 190 (246)
T ss_dssp SCTTCEEEEEEESCCCC-------CSSCCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHHST
T ss_pred ccccccCEEEEECCCccc-ccchhHHhhccHHHHHHHHHHcCCCCEEEEEeccHHHHHHHHHHHHhCc
Confidence 146789999865422111 0000 014799999999999999999876643 3344444443
No 182
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.52 E-value=7.2e-14 Score=111.79 Aligned_cols=121 Identities=13% Similarity=0.077 Sum_probs=87.6
Q ss_pred HHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccc
Q 027388 74 KSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYE 153 (224)
Q Consensus 74 ~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~ 153 (224)
..++..+...++.+|||+|||+|.++..++.....+++++|+|+.+++.|++++. ..++..++.++++|+.+
T Consensus 113 ~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~--------~~~l~~~v~~~~~D~~~ 184 (284)
T 1nv8_A 113 ELALELIRKYGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAE--------RHGVSDRFFVRKGEFLE 184 (284)
T ss_dssp HHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHH--------HTTCTTSEEEEESSTTG
T ss_pred HHHHHHhcccCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH--------HcCCCCceEEEECcchh
Confidence 3333333334678999999999999999886645689999999999999999976 23444469999999876
Q ss_pred cccccccCCCCCe---eEEEEccccccc---------cCCH------HHHHHHHHHHH-hhccCCeEEEEEeCCh
Q 027388 154 VHLDKVLADDAPF---DICSCQFAMHYS---------WSTE------ARARRALANVS-ALLRPGGTFIGTMPDA 209 (224)
Q Consensus 154 ~~~~~~~~~~~~~---D~i~~~~~l~~~---------~~~~------~~~~~~l~~~~-~~lk~gG~li~~~~~~ 209 (224)
.. .+.| |+|+++-..... +.+. .+...+++++. +.++|||+|++..+..
T Consensus 185 ~~-------~~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~~ 252 (284)
T 1nv8_A 185 PF-------KEKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGED 252 (284)
T ss_dssp GG-------GGGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCTT
T ss_pred hc-------ccccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECch
Confidence 32 2468 999997321100 0111 11237899999 9999999999987753
No 183
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.52 E-value=1.7e-13 Score=110.03 Aligned_cols=114 Identities=16% Similarity=0.205 Sum_probs=81.0
Q ss_pred cCCCeEEEecCCCchhHHHHHhh-cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccC
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~-~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (224)
.++++|||||||+|..+..+++. ...++++||+++.+++.|++++..... ...-..+++++++|+.+....
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~----~~~~~~rv~~~~~D~~~~l~~---- 153 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNA----GSYDDPRFKLVIDDGVNFVNQ---- 153 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHS----SCTTCTTCCEECSCSCC---C----
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhccc----ccccCCceEEEEChHHHHHhh----
Confidence 46789999999999999998865 356899999999999999998752100 000134789999998765321
Q ss_pred CCCCeeEEEEccccccccCCHHHH--HHHHHHHHhhccCCeEEEEEe
Q 027388 162 DDAPFDICSCQFAMHYSWSTEARA--RRALANVSALLRPGGTFIGTM 206 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~~~~~~~~~~--~~~l~~~~~~lk~gG~li~~~ 206 (224)
..++||+|++....... ..... ..+++.+.++|+|||+|++..
T Consensus 154 ~~~~fDvIi~D~~~p~~--~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 154 TSQTFDVIISDCTDPIG--PGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp CCCCEEEEEECC------------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCCccEEEECCCCccC--cchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 35789999996653322 11122 679999999999999999974
No 184
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.52 E-value=2.1e-13 Score=105.58 Aligned_cols=123 Identities=15% Similarity=0.124 Sum_probs=86.3
Q ss_pred hhcCCCeEEEecCCCchhHHHHHhh--cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccc
Q 027388 81 YARRGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK 158 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~G~~~~~l~~~--~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 158 (224)
.+.++.+|||+|||+|.++..++.. ..+.|+++|+|+.|++...+.... ..++.++++|+.......
T Consensus 73 ~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~-----------r~nv~~i~~Da~~~~~~~ 141 (232)
T 3id6_C 73 PIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR-----------RPNIFPLLADARFPQSYK 141 (232)
T ss_dssp SCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH-----------CTTEEEEECCTTCGGGTT
T ss_pred CCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh-----------cCCeEEEEcccccchhhh
Confidence 3678999999999999999988764 356999999999987554433220 135899999987543210
Q ss_pred ccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeC------------ChHHHHHHhhhcccc
Q 027388 159 VLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP------------DANVIIKKLREEHFC 222 (224)
Q Consensus 159 ~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~------------~~~~~~~~~~~~gf~ 222 (224)
. ..+.||+|++..+.. .....+...+.+.|||||.|++... +.......++++||.
T Consensus 142 ~--~~~~~D~I~~d~a~~------~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf~ 209 (232)
T 3id6_C 142 S--VVENVDVLYVDIAQP------DQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFE 209 (232)
T ss_dssp T--TCCCEEEEEECCCCT------THHHHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTTEE
T ss_pred c--cccceEEEEecCCCh------hHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCCCE
Confidence 0 246899999886541 2233345566669999999998732 235667788877874
No 185
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.52 E-value=3.5e-14 Score=108.54 Aligned_cols=103 Identities=17% Similarity=0.138 Sum_probs=82.2
Q ss_pred cCCCeEEEecCCCchhHHHHHhhc--CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccc-ccccc
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKAK--IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV-HLDKV 159 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~~--~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~~~~ 159 (224)
.++.+|||||||+|..+..++... ..+++++|+|+.+++.|++++. ..++..+++++++|+.+. +.
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~--------~~~~~~~v~~~~~d~~~~~~~--- 123 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLH--------DNGLIDRVELQVGDPLGIAAG--- 123 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHH--------HHSGGGGEEEEESCHHHHHTT---
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH--------HCCCCceEEEEEecHHHHhcc---
Confidence 467899999999999999987652 5699999999999999999876 233445689999998754 22
Q ss_pred cCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEe
Q 027388 160 LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (224)
Q Consensus 160 ~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~ 206 (224)
..+ ||+|++.... .+...+++.+.++|+|||++++..
T Consensus 124 --~~~-fD~v~~~~~~-------~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 124 --QRD-IDILFMDCDV-------FNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp --CCS-EEEEEEETTT-------SCHHHHHHHHGGGEEEEEEEEEES
T ss_pred --CCC-CCEEEEcCCh-------hhhHHHHHHHHHhcCCCeEEEEEC
Confidence 235 9999987432 345789999999999999999853
No 186
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.52 E-value=1.8e-14 Score=112.76 Aligned_cols=109 Identities=17% Similarity=0.158 Sum_probs=85.0
Q ss_pred hcCCCeEEEecCCCchhHHHHHhh--cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccc
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKV 159 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~--~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 159 (224)
..++.+|||||||+|..+..++.. ..++|+++|+++.+++.|++++. ..++..+++++++|+.+......
T Consensus 58 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~--------~~g~~~~i~~~~gda~~~l~~~~ 129 (242)
T 3r3h_A 58 LTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWR--------EAKQEHKIKLRLGPALDTLHSLL 129 (242)
T ss_dssp HHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHH--------HTTCTTTEEEEESCHHHHHHHHH
T ss_pred hcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH--------HcCCCCcEEEEEcCHHHHHHHHh
Confidence 457789999999999999998864 25699999999999999999876 33555679999999876432100
Q ss_pred c-CCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 160 L-ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 160 ~-~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
. ...++||+|++.... .....+++.+.++|+|||+|++.
T Consensus 130 ~~~~~~~fD~V~~d~~~-------~~~~~~l~~~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 130 NEGGEHQFDFIFIDADK-------TNYLNYYELALKLVTPKGLIAID 169 (242)
T ss_dssp HHHCSSCEEEEEEESCG-------GGHHHHHHHHHHHEEEEEEEEEE
T ss_pred hccCCCCEeEEEEcCCh-------HHhHHHHHHHHHhcCCCeEEEEE
Confidence 0 004789999987642 44667899999999999999985
No 187
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.52 E-value=5.4e-13 Score=109.91 Aligned_cols=105 Identities=13% Similarity=0.096 Sum_probs=86.2
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhcC-CeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccccc
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAKI-GYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~~-~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (224)
.....+|||||||+|.++..+++..+ .+++..|+ +.+++.+++.+.. ....+++++.+|+.+.+
T Consensus 177 ~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~---------~~~~rv~~~~gD~~~~~----- 241 (353)
T 4a6d_A 177 LSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSF---------QEEEQIDFQEGDFFKDP----- 241 (353)
T ss_dssp GGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC-----------CCSEEEEESCTTTSC-----
T ss_pred cccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhh---------cccCceeeecCccccCC-----
Confidence 45668999999999999999987644 46778887 7799999988762 33567999999987543
Q ss_pred CCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
...+|++++..++|++ +.++...+|+++++.|+|||.|+|.
T Consensus 242 --~~~~D~~~~~~vlh~~--~d~~~~~iL~~~~~al~pgg~lli~ 282 (353)
T 4a6d_A 242 --LPEADLYILARVLHDW--ADGKCSHLLERIYHTCKPGGGILVI 282 (353)
T ss_dssp --CCCCSEEEEESSGGGS--CHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred --CCCceEEEeeeecccC--CHHHHHHHHHHHHhhCCCCCEEEEE
Confidence 3468999999999987 6777889999999999999988875
No 188
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.51 E-value=8e-14 Score=113.81 Aligned_cols=114 Identities=17% Similarity=0.106 Sum_probs=84.5
Q ss_pred cCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCC-CeeEEeccccccccccccC
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSF-PARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~-~v~~~~~d~~~~~~~~~~~ 161 (224)
.++.+|||+|||+|.++..++..+. +|++||+|+.+++.|++++. ..++.. ++.++++|+.++.... ..
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~ga-~V~~VD~s~~al~~a~~n~~--------~~gl~~~~v~~i~~D~~~~l~~~-~~ 221 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAAGA-EVTHVDASKKAIGWAKENQV--------LAGLEQAPIRWICEDAMKFIQRE-ER 221 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHH--------HHTCTTSCEEEECSCHHHHHHHH-HH
T ss_pred CCCCcEEEcccccCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHH--------HcCCCccceEEEECcHHHHHHHH-Hh
Confidence 4678999999999999999886555 99999999999999999976 223333 4899999987653210 00
Q ss_pred CCCCeeEEEEcccccc------ccCCHHHHHHHHHHHHhhccCCeEEEEEe
Q 027388 162 DDAPFDICSCQFAMHY------SWSTEARARRALANVSALLRPGGTFIGTM 206 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~~------~~~~~~~~~~~l~~~~~~lk~gG~li~~~ 206 (224)
....||+|+++..... ++....+...++..+.++|+|||+|++..
T Consensus 222 ~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~ 272 (332)
T 2igt_A 222 RGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLT 272 (332)
T ss_dssp HTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEE
T ss_pred cCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 1468999998543111 01123678899999999999999977754
No 189
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.51 E-value=1.9e-13 Score=110.91 Aligned_cols=128 Identities=20% Similarity=0.226 Sum_probs=92.2
Q ss_pred HhhcCCCeEEEecCCCchhHHHHHhh--cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccc
Q 027388 80 LYARRGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD 157 (224)
Q Consensus 80 ~~~~~~~~iLDiGcG~G~~~~~l~~~--~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 157 (224)
+...++.+|||+|||+|..+..++.. ....++++|+|+.+++.+++++.. .++. ++.++++|+..++.
T Consensus 114 l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~--------~g~~-~v~~~~~D~~~~~~- 183 (315)
T 1ixk_A 114 LDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSR--------LGVL-NVILFHSSSLHIGE- 183 (315)
T ss_dssp HCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHH--------HTCC-SEEEESSCGGGGGG-
T ss_pred hCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHH--------hCCC-eEEEEECChhhccc-
Confidence 34567889999999999999998865 346899999999999999999762 2222 58999999887653
Q ss_pred cccCCCCCeeEEEEcc------ccccccC-----CH-------HHHHHHHHHHHhhccCCeEEEEEeCC------hHHHH
Q 027388 158 KVLADDAPFDICSCQF------AMHYSWS-----TE-------ARARRALANVSALLRPGGTFIGTMPD------ANVII 213 (224)
Q Consensus 158 ~~~~~~~~~D~i~~~~------~l~~~~~-----~~-------~~~~~~l~~~~~~lk~gG~li~~~~~------~~~~~ 213 (224)
..+.||+|++.. ++....+ .. ..+..++.++.++|||||+|++++.. ...+.
T Consensus 184 ----~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~ 259 (315)
T 1ixk_A 184 ----LNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQ 259 (315)
T ss_dssp ----GCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHH
T ss_pred ----ccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHH
Confidence 246899999842 2221100 00 12368999999999999999997542 23445
Q ss_pred HHhhhccc
Q 027388 214 KKLREEHF 221 (224)
Q Consensus 214 ~~~~~~gf 221 (224)
..+++.+|
T Consensus 260 ~~l~~~~~ 267 (315)
T 1ixk_A 260 WALDNFDV 267 (315)
T ss_dssp HHHHHSSE
T ss_pred HHHhcCCC
Confidence 55665554
No 190
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.51 E-value=4.9e-14 Score=104.11 Aligned_cols=112 Identities=19% Similarity=0.254 Sum_probs=83.3
Q ss_pred hcCCCeEEEecCCCchhHHHHHhh-c-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccc----
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKA-K-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH---- 155 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~-~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~---- 155 (224)
..++.+|||+|||+|.++..++.. + ..+++++|+++ +++. .++.++++|+.+.+
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-------------------~~~~~~~~d~~~~~~~~~ 79 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-------------------VGVDFLQGDFRDELVMKA 79 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-------------------TTEEEEESCTTSHHHHHH
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-------------------CcEEEEEcccccchhhhh
Confidence 467789999999999999988866 2 36999999999 6432 24888999988765
Q ss_pred ----cccccCCCCCeeEEEEccccccccCCHHH-------HHHHHHHHHhhccCCeEEEEEeCCh---HHHHHHhhh
Q 027388 156 ----LDKVLADDAPFDICSCQFAMHYSWSTEAR-------ARRALANVSALLRPGGTFIGTMPDA---NVIIKKLRE 218 (224)
Q Consensus 156 ----~~~~~~~~~~~D~i~~~~~l~~~~~~~~~-------~~~~l~~~~~~lk~gG~li~~~~~~---~~~~~~~~~ 218 (224)
. +.++||+|+++.++++......+ ...++..+.++|+|||.+++.++.. ..+...+.+
T Consensus 80 ~~~~~-----~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~ 151 (180)
T 1ej0_A 80 LLERV-----GDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRS 151 (180)
T ss_dssp HHHHH-----TTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHHHHHHH
T ss_pred hhccC-----CCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHHHHHHHH
Confidence 3 45789999998887764111111 1688999999999999999976643 344444443
No 191
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.51 E-value=9.2e-14 Score=108.33 Aligned_cols=111 Identities=14% Similarity=0.100 Sum_probs=84.7
Q ss_pred hhcCCCeEEEecCCCchhHHHHHhhc--CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccc
Q 027388 81 YARRGDVVLDLACGKGGDLIKWDKAK--IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK 158 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~G~~~~~l~~~~--~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 158 (224)
...++.+|||||||+|..+..++... ..+++++|+++.+++.|++++.. .++..++.++++|+.+.....
T Consensus 57 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~--------~g~~~~v~~~~~d~~~~~~~~ 128 (239)
T 2hnk_A 57 KISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKE--------NGLENKIFLKLGSALETLQVL 128 (239)
T ss_dssp HHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHH--------TTCGGGEEEEESCHHHHHHHH
T ss_pred HhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH--------cCCCCCEEEEECCHHHHHHHH
Confidence 34578899999999999999988653 56999999999999999998762 233445899999976531100
Q ss_pred ----------ccCCC--CCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEe
Q 027388 159 ----------VLADD--APFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (224)
Q Consensus 159 ----------~~~~~--~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~ 206 (224)
..++. ++||+|++.... .....++..+.++|+|||++++..
T Consensus 129 ~~~~~~~~~~~~f~~~~~~fD~I~~~~~~-------~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 129 IDSKSAPSWASDFAFGPSSIDLFFLDADK-------ENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp HHCSSCCGGGTTTCCSTTCEEEEEECSCG-------GGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HhhcccccccccccCCCCCcCEEEEeCCH-------HHHHHHHHHHHHHcCCCeEEEEEc
Confidence 00112 789999988654 345688999999999999999975
No 192
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.50 E-value=2e-13 Score=103.41 Aligned_cols=117 Identities=18% Similarity=0.166 Sum_probs=80.1
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhc---CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccc-
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAK---IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD- 157 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~---~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~- 157 (224)
..++.+|||+|||+|.++..++... ..+++|+|+|+.. . ..++.++++|+.+....
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~--------~------------~~~v~~~~~d~~~~~~~~ 79 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD--------P------------IPNVYFIQGEIGKDNMNN 79 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC--------C------------CTTCEEEECCTTTTSSCC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC--------C------------CCCceEEEccccchhhhh
Confidence 3567899999999999999988653 4689999999931 1 12478889998765400
Q ss_pred -----------------c--ccCCCCCeeEEEEccccccccCCHHH-------HHHHHHHHHhhccCCeEEEEEeCC---
Q 027388 158 -----------------K--VLADDAPFDICSCQFAMHYSWSTEAR-------ARRALANVSALLRPGGTFIGTMPD--- 208 (224)
Q Consensus 158 -----------------~--~~~~~~~~D~i~~~~~l~~~~~~~~~-------~~~~l~~~~~~lk~gG~li~~~~~--- 208 (224)
. ...+..+||+|++..++++.-....+ ...++..+.++|+|||.|++.+..
T Consensus 80 ~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~ 159 (201)
T 2plw_A 80 IKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGSQ 159 (201)
T ss_dssp C-----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTT
T ss_pred hccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCCC
Confidence 0 00135789999998877652000111 234889999999999999987554
Q ss_pred hHHHHHHhhh
Q 027388 209 ANVIIKKLRE 218 (224)
Q Consensus 209 ~~~~~~~~~~ 218 (224)
...+...+.+
T Consensus 160 ~~~l~~~l~~ 169 (201)
T 2plw_A 160 TNNLKTYLKG 169 (201)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
Confidence 3445555543
No 193
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.49 E-value=4.7e-13 Score=109.88 Aligned_cols=139 Identities=15% Similarity=0.158 Sum_probs=100.4
Q ss_pred ehhhhHHHHHHHHHHH-hhcCCCeEEEecCCCchhHHHHHhhcC------CeEEEEeCChhHHHHHHHhccCCccccccc
Q 027388 65 HLKKLNNWIKSVLVQL-YARRGDVVLDLACGKGGDLIKWDKAKI------GYYVGIDIAEGSIEDCRTRYNGDADHHQRR 137 (224)
Q Consensus 65 ~~~~~~~~~~~~~~~~-~~~~~~~iLDiGcG~G~~~~~l~~~~~------~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~ 137 (224)
++..+...+..++..+ ...++.+|||+|||+|.++..++.... ..++|+|+++.+++.|+.++..
T Consensus 110 TP~~i~~~~~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~-------- 181 (344)
T 2f8l_A 110 TPDSIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADL-------- 181 (344)
T ss_dssp CCHHHHHHHHHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHH--------
T ss_pred ChHHHHHHHHHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHh--------
Confidence 4455555555554433 234568999999999999998875432 5799999999999999998651
Q ss_pred ccCCCCeeEEeccccccccccccCCCCCeeEEEEccccccccCCHHH----------------HHHHHHHHHhhccCCeE
Q 027388 138 KKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEAR----------------ARRALANVSALLRPGGT 201 (224)
Q Consensus 138 ~~~~~~v~~~~~d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~----------------~~~~l~~~~~~lk~gG~ 201 (224)
.++ ++.++++|..... ....||+|+++..++++ +..+ ...++..+.+.|+|||+
T Consensus 182 ~g~--~~~i~~~D~l~~~------~~~~fD~Ii~NPPfg~~--~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~ 251 (344)
T 2f8l_A 182 QRQ--KMTLLHQDGLANL------LVDPVDVVISDLPVGYY--PDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGY 251 (344)
T ss_dssp HTC--CCEEEESCTTSCC------CCCCEEEEEEECCCSEE--SCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEE
T ss_pred CCC--CceEEECCCCCcc------ccCCccEEEECCCCCCc--CchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCE
Confidence 222 4788999976532 35789999999887665 2222 13689999999999999
Q ss_pred EEEEeCC-------hHHHHHHhhhccc
Q 027388 202 FIGTMPD-------ANVIIKKLREEHF 221 (224)
Q Consensus 202 li~~~~~-------~~~~~~~~~~~gf 221 (224)
+++.+|+ ...+++.+.+.++
T Consensus 252 ~~~v~p~~~~~~~~~~~ir~~l~~~~~ 278 (344)
T 2f8l_A 252 LFFLVPDAMFGTSDFAKVDKFIKKNGH 278 (344)
T ss_dssp EEEEEEGGGGGSTTHHHHHHHHHHHEE
T ss_pred EEEEECchhcCCchHHHHHHHHHhCCe
Confidence 9988753 3567777777665
No 194
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.49 E-value=7e-14 Score=111.50 Aligned_cols=108 Identities=10% Similarity=0.067 Sum_probs=76.2
Q ss_pred HHHHHHhh-cCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCee-EEecccc
Q 027388 75 SVLVQLYA-RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPAR-LICGDCY 152 (224)
Q Consensus 75 ~~~~~~~~-~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~-~~~~d~~ 152 (224)
.++..... .++.+|||||||||.++..+++.+..+|+|||+|+.|++.+.+... ++. +...++.
T Consensus 75 ~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~~--------------rv~~~~~~ni~ 140 (291)
T 3hp7_A 75 KALAVFNLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQDD--------------RVRSMEQYNFR 140 (291)
T ss_dssp HHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTCT--------------TEEEECSCCGG
T ss_pred HHHHhcCCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCc--------------ccceecccCce
Confidence 34443333 3567999999999999998887766799999999999998654322 122 2223443
Q ss_pred ccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 153 EVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 153 ~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
.+..... +...||+|++..+++++ ..++.++.++|+|||.|++.
T Consensus 141 ~l~~~~l--~~~~fD~v~~d~sf~sl-------~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 141 YAEPVDF--TEGLPSFASIDVSFISL-------NLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp GCCGGGC--TTCCCSEEEECCSSSCG-------GGTHHHHHHHSCTTCEEEEE
T ss_pred ecchhhC--CCCCCCEEEEEeeHhhH-------HHHHHHHHHHcCcCCEEEEE
Confidence 3332111 23459999998877643 67899999999999998875
No 195
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.49 E-value=1.1e-13 Score=107.11 Aligned_cols=105 Identities=19% Similarity=0.202 Sum_probs=82.6
Q ss_pred hhcCCCeEEEecCCCchhHHHHHhhcC-------CeEEEEeCChhHHHHHHHhccCCcccccccccC----CCCeeEEec
Q 027388 81 YARRGDVVLDLACGKGGDLIKWDKAKI-------GYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKF----SFPARLICG 149 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~G~~~~~l~~~~~-------~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~----~~~v~~~~~ 149 (224)
...++.+|||||||+|.++..++.... .+++++|+++.+++.+++++... +. ..++.+.++
T Consensus 81 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--------~~~~~~~~~v~~~~~ 152 (227)
T 1r18_A 81 HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTD--------DRSMLDSGQLLIVEG 152 (227)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHH--------HHHHHHHTSEEEEES
T ss_pred hCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhc--------CccccCCCceEEEEC
Confidence 356788999999999999998876432 58999999999999999887521 10 235899999
Q ss_pred cccccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCC
Q 027388 150 DCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (224)
Q Consensus 150 d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~ 208 (224)
|+.. ... ..++||+|++..++++++ ..+.+.|+|||++++.+..
T Consensus 153 d~~~-~~~----~~~~fD~I~~~~~~~~~~----------~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 153 DGRK-GYP----PNAPYNAIHVGAAAPDTP----------TELINQLASGGRLIVPVGP 196 (227)
T ss_dssp CGGG-CCG----GGCSEEEEEECSCBSSCC----------HHHHHTEEEEEEEEEEESC
T ss_pred Cccc-CCC----cCCCccEEEECCchHHHH----------HHHHHHhcCCCEEEEEEec
Confidence 9875 221 237899999999988761 6789999999999998764
No 196
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.49 E-value=1e-13 Score=108.08 Aligned_cols=112 Identities=19% Similarity=0.152 Sum_probs=83.7
Q ss_pred cCCCeEEEecCCCchhHHHHHhh-----cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccc---
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKA-----KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV--- 154 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~-----~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~--- 154 (224)
.++.+|||||||+|..+..++.. ...+|++||+|+.+++.|+.. ..+++++++|+.+.
T Consensus 80 ~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~--------------~~~v~~~~gD~~~~~~l 145 (236)
T 2bm8_A 80 LRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASD--------------MENITLHQGDCSDLTTF 145 (236)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGG--------------CTTEEEEECCSSCSGGG
T ss_pred cCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhcc--------------CCceEEEECcchhHHHH
Confidence 46789999999999999988765 357899999999998877621 23699999999874
Q ss_pred ccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHh-hccCCeEEEEEeC-------ChHHHHHHhhhc
Q 027388 155 HLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSA-LLRPGGTFIGTMP-------DANVIIKKLREE 219 (224)
Q Consensus 155 ~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~-~lk~gG~li~~~~-------~~~~~~~~~~~~ 219 (224)
+.. ...+||+|++... + .+...++.++.+ +|+|||+|++... +...+.+.+++.
T Consensus 146 ~~~----~~~~fD~I~~d~~-~------~~~~~~l~~~~r~~LkpGG~lv~~d~~~~~~~~~~~~~~~~l~~~ 207 (236)
T 2bm8_A 146 EHL----REMAHPLIFIDNA-H------ANTFNIMKWAVDHLLEEGDYFIIEDMIPYWYRYAPQLFSEYLGAF 207 (236)
T ss_dssp GGG----SSSCSSEEEEESS-C------SSHHHHHHHHHHHTCCTTCEEEECSCHHHHHHHCHHHHHHHHHTT
T ss_pred Hhh----ccCCCCEEEECCc-h------HhHHHHHHHHHHhhCCCCCEEEEEeCcccccccCHHHHHHHHHhC
Confidence 321 2347999998665 2 245678999997 9999999999631 334556666554
No 197
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.48 E-value=1.3e-13 Score=108.05 Aligned_cols=109 Identities=12% Similarity=0.078 Sum_probs=84.0
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhc--CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccc
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAK--IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKV 159 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~--~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 159 (224)
..++.+|||||||+|..+..++... ..+++++|+++.+++.|++++. ..++..+++++++|+.+......
T Consensus 77 ~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~--------~~g~~~~i~~~~gda~~~l~~l~ 148 (247)
T 1sui_A 77 LINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIK--------KAGVDHKIDFREGPALPVLDEMI 148 (247)
T ss_dssp HTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHH--------HTTCGGGEEEEESCHHHHHHHHH
T ss_pred hhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH--------HcCCCCCeEEEECCHHHHHHHHH
Confidence 3567899999999999999888652 4699999999999999999876 23445579999999865421000
Q ss_pred cC--CCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 160 LA--DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 160 ~~--~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
.. ..++||+|++.... .....++..+.++|+|||+|++.
T Consensus 149 ~~~~~~~~fD~V~~d~~~-------~~~~~~l~~~~~~LkpGG~lv~d 189 (247)
T 1sui_A 149 KDEKNHGSYDFIFVDADK-------DNYLNYHKRLIDLVKVGGVIGYD 189 (247)
T ss_dssp HSGGGTTCBSEEEECSCS-------TTHHHHHHHHHHHBCTTCCEEEE
T ss_pred hccCCCCCEEEEEEcCch-------HHHHHHHHHHHHhCCCCeEEEEe
Confidence 00 04789999987542 34678999999999999999986
No 198
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.48 E-value=2.2e-13 Score=121.31 Aligned_cols=128 Identities=16% Similarity=0.190 Sum_probs=96.1
Q ss_pred cCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCC-CCeeEEeccccccccccccC
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFS-FPARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~ 161 (224)
.++.+|||+|||+|.++..++..+..+|++||+|+.+++.|++++.. .++. .++.++++|+.+....
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~--------ngl~~~~v~~i~~D~~~~l~~---- 605 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRL--------NGLTGRAHRLIQADCLAWLRE---- 605 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHH--------TTCCSTTEEEEESCHHHHHHH----
T ss_pred cCCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHH--------cCCCccceEEEecCHHHHHHh----
Confidence 47889999999999999998876666799999999999999999872 3444 4699999998764211
Q ss_pred CCCCeeEEEEccccc-------cccCCHHHHHHHHHHHHhhccCCeEEEEEeCC--hHHHHHHhhhcccc
Q 027388 162 DDAPFDICSCQFAMH-------YSWSTEARARRALANVSALLRPGGTFIGTMPD--ANVIIKKLREEHFC 222 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~-------~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~--~~~~~~~~~~~gf~ 222 (224)
..++||+|++..... ..+....+...++..+.++|+|||+|++++.. ...-.+.+.+.||.
T Consensus 606 ~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~~~~~~l~~~g~~ 675 (703)
T 3v97_A 606 ANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLK 675 (703)
T ss_dssp CCCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCCCCHHHHHHTTEE
T ss_pred cCCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCcccccCHHHHHHcCCc
Confidence 357899999865321 01123467888999999999999999998754 22224555666653
No 199
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.48 E-value=1.3e-13 Score=114.91 Aligned_cols=117 Identities=13% Similarity=0.133 Sum_probs=88.3
Q ss_pred cCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCC-CeeEEeccccccccccccC
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSF-PARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~-~v~~~~~d~~~~~~~~~~~ 161 (224)
.++.+|||+|||+|.++..++..+..+|+++|+|+.+++.|++++.. .++.. ++.++++|+.+.... ...
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~--------n~~~~~~v~~~~~D~~~~l~~-~~~ 281 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEA--------NHLDMANHQLVVMDVFDYFKY-ARR 281 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHH--------TTCCCTTEEEEESCHHHHHHH-HHH
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH--------cCCCccceEEEECCHHHHHHH-HHH
Confidence 46789999999999999999865666899999999999999999862 34443 699999998763210 000
Q ss_pred CCCCeeEEEEcccc-----ccccCCHHHHHHHHHHHHhhccCCeEEEEEeCC
Q 027388 162 DDAPFDICSCQFAM-----HYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (224)
Q Consensus 162 ~~~~~D~i~~~~~l-----~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~ 208 (224)
....||+|++.... ............++..+.++|+|||+|++++..
T Consensus 282 ~~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~ 333 (385)
T 2b78_A 282 HHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNA 333 (385)
T ss_dssp TTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred hCCCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 23589999986433 223233456777889999999999999998653
No 200
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.48 E-value=2.7e-13 Score=109.30 Aligned_cols=110 Identities=10% Similarity=0.023 Sum_probs=82.4
Q ss_pred CeEEEecCCCchhHHHHHhh-cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCCCC
Q 027388 86 DVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDA 164 (224)
Q Consensus 86 ~~iLDiGcG~G~~~~~l~~~-~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~ 164 (224)
.+|||||||+|.++..+++. ...++++||+++.+++.|++++.. ....+++++++|+.++... . ..+
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~---------~~~~rv~v~~~Da~~~l~~-~--~~~ 158 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDI---------PRAPRVKIRVDDARMVAES-F--TPA 158 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCC---------CCTTTEEEEESCHHHHHHT-C--CTT
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccc---------cCCCceEEEECcHHHHHhh-c--cCC
Confidence 49999999999999999873 445899999999999999999862 1245799999998765321 0 257
Q ss_pred CeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeC
Q 027388 165 PFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (224)
Q Consensus 165 ~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~ 207 (224)
+||+|++....+......-....+++.++++|+|||+|++...
T Consensus 159 ~fDvIi~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 159 SRDVIIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp CEEEEEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 8999998654332100000126799999999999999998754
No 201
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.48 E-value=4.8e-13 Score=103.34 Aligned_cols=106 Identities=17% Similarity=0.147 Sum_probs=81.5
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhc--CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccc
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAK--IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKV 159 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~--~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 159 (224)
..++.+|||+|||+|.++..++... ..+++++|+|+.+++.+++++.. ..++.++++|+.+......
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~-----------~~~v~~~~~d~~~~~~~~~ 139 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEE-----------RRNIVPILGDATKPEEYRA 139 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSS-----------CTTEEEEECCTTCGGGGTT
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhc-----------cCCCEEEEccCCCcchhhc
Confidence 4578899999999999999988652 36899999999999999888762 1468999999876421000
Q ss_pred cCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEe
Q 027388 160 LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (224)
Q Consensus 160 ~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~ 206 (224)
..+.||+|++.... ......++.++.++|+|||.+++..
T Consensus 140 --~~~~~D~v~~~~~~------~~~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 140 --LVPKVDVIFEDVAQ------PTQAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp --TCCCEEEEEECCCS------TTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --ccCCceEEEECCCC------HhHHHHHHHHHHHhcCCCCEEEEEE
Confidence 23589999986541 1334556999999999999998863
No 202
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.47 E-value=2.9e-13 Score=108.16 Aligned_cols=118 Identities=15% Similarity=0.128 Sum_probs=83.3
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCC--cccccccccCCCCeeEEeccccccccccc
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGD--ADHHQRRKKFSFPARLICGDCYEVHLDKV 159 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~--~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 159 (224)
...+.+|||||||+|..+..+++....++++||+++.+++.|++++ .. +........-..+++++++|+.+...
T Consensus 73 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~--- 148 (281)
T 1mjf_A 73 HPKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIK--- 148 (281)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHH---
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhc---
Confidence 3467899999999999999988764568999999999999999987 21 00000000014568999999865422
Q ss_pred cCCCCCeeEEEEccccccccCCHHH--HHHHHHHHHhhccCCeEEEEEeC
Q 027388 160 LADDAPFDICSCQFAMHYSWSTEAR--ARRALANVSALLRPGGTFIGTMP 207 (224)
Q Consensus 160 ~~~~~~~D~i~~~~~l~~~~~~~~~--~~~~l~~~~~~lk~gG~li~~~~ 207 (224)
..+.||+|++....... .... ...+++.+.++|+|||++++...
T Consensus 149 --~~~~fD~Ii~d~~~~~~--~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 149 --NNRGFDVIIADSTDPVG--PAKVLFSEEFYRYVYDALNNPGIYVTQAG 194 (281)
T ss_dssp --HCCCEEEEEEECCCCC-------TTSHHHHHHHHHHEEEEEEEEEEEE
T ss_pred --ccCCeeEEEECCCCCCC--cchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 14689999987653221 1122 26789999999999999999753
No 203
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.47 E-value=2.1e-13 Score=108.53 Aligned_cols=117 Identities=15% Similarity=0.185 Sum_probs=85.1
Q ss_pred hhcCCCeEEEecCCCchhHHHHHhh--cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccc
Q 027388 81 YARRGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK 158 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~G~~~~~l~~~--~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 158 (224)
...++.+|||+|||+|..+..++.. +..+++++|+|+.+++.+++++.. .++. ++.++++|+.+++...
T Consensus 80 ~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~--------~g~~-~v~~~~~D~~~~~~~~ 150 (274)
T 3ajd_A 80 NPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINR--------MGVL-NTIIINADMRKYKDYL 150 (274)
T ss_dssp CCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHH--------TTCC-SEEEEESCHHHHHHHH
T ss_pred CCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHH--------hCCC-cEEEEeCChHhcchhh
Confidence 4567889999999999999988864 337999999999999999998762 2233 6899999987664310
Q ss_pred ccCCCCCeeEEEEccccc---cc-----------cCCHHHHHHHHHHHHhhccCCeEEEEEeC
Q 027388 159 VLADDAPFDICSCQFAMH---YS-----------WSTEARARRALANVSALLRPGGTFIGTMP 207 (224)
Q Consensus 159 ~~~~~~~~D~i~~~~~l~---~~-----------~~~~~~~~~~l~~~~~~lk~gG~li~~~~ 207 (224)
. ...+.||+|++..... .+ ..-...+..++..+.++|||||.|++++.
T Consensus 151 ~-~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stc 212 (274)
T 3ajd_A 151 L-KNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTC 212 (274)
T ss_dssp H-HTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEES
T ss_pred h-hccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEEC
Confidence 0 0146899999863211 00 00002357899999999999999999765
No 204
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.46 E-value=2.6e-13 Score=112.53 Aligned_cols=98 Identities=17% Similarity=0.170 Sum_probs=80.0
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccccc
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (224)
..++.+|||||||+|.++..++... ..+++++|+ +.+++.+++. .+++++.+|+.+ +.
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~---------------~~v~~~~~d~~~-~~---- 265 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL---------------SGIEHVGGDMFA-SV---- 265 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC---------------TTEEEEECCTTT-CC----
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc---------------CCCEEEeCCccc-CC----
Confidence 3457899999999999999988754 457889999 8888766431 248999999876 43
Q ss_pred CCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
+ . ||+|++..++|++ +......++++++++|+|||+|++.
T Consensus 266 -~-~-~D~v~~~~~lh~~--~d~~~~~~l~~~~~~L~pgG~l~i~ 305 (372)
T 1fp1_D 266 -P-Q-GDAMILKAVCHNW--SDEKCIEFLSNCHKALSPNGKVIIV 305 (372)
T ss_dssp -C-C-EEEEEEESSGGGS--CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -C-C-CCEEEEecccccC--CHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 2 2 9999999999998 5556669999999999999999886
No 205
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.46 E-value=4.2e-13 Score=111.04 Aligned_cols=98 Identities=14% Similarity=0.147 Sum_probs=80.4
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccccc
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (224)
..+..+|||||||+|.++..+++.. ..+++++|+ +.+++.+++. .+++++.+|+.+ +.
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~---------------~~v~~~~~D~~~-~~---- 257 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF---------------PGVTHVGGDMFK-EV---- 257 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC---------------TTEEEEECCTTT-CC----
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc---------------CCeEEEeCCcCC-CC----
Confidence 3457899999999999999998653 457999999 7777665432 359999999876 54
Q ss_pred CCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
+. . |+|++..++|++ +.++...+|+++++.|+|||+|++.
T Consensus 258 -p~-~-D~v~~~~vlh~~--~d~~~~~~L~~~~~~L~pgG~l~i~ 297 (364)
T 3p9c_A 258 -PS-G-DTILMKWILHDW--SDQHCATLLKNCYDALPAHGKVVLV 297 (364)
T ss_dssp -CC-C-SEEEEESCGGGS--CHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred -CC-C-CEEEehHHhccC--CHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 32 3 999999999987 6678889999999999999999885
No 206
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.46 E-value=3.4e-13 Score=111.75 Aligned_cols=97 Identities=16% Similarity=0.156 Sum_probs=79.5
Q ss_pred cCCCeEEEecCCCchhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccC
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (224)
.+..+|||||||+|.++..+++.. ..+++++|+ +.+++.+++. .+++++.+|+.+ +.
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~---------------~~v~~~~~d~~~-~~----- 259 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF---------------SGVEHLGGDMFD-GV----- 259 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC---------------TTEEEEECCTTT-CC-----
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc---------------CCCEEEecCCCC-CC-----
Confidence 456899999999999999998753 457999999 8787665432 358999999875 43
Q ss_pred CCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
+. . |+|++..++|++ +.++...+|+++++.|+|||+|++.
T Consensus 260 p~-~-D~v~~~~vlh~~--~~~~~~~~l~~~~~~L~pgG~l~i~ 299 (368)
T 3reo_A 260 PK-G-DAIFIKWICHDW--SDEHCLKLLKNCYAALPDHGKVIVA 299 (368)
T ss_dssp CC-C-SEEEEESCGGGB--CHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred CC-C-CEEEEechhhcC--CHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 32 3 999999999988 6677889999999999999999885
No 207
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.46 E-value=1.1e-12 Score=108.73 Aligned_cols=119 Identities=13% Similarity=-0.025 Sum_probs=90.6
Q ss_pred CCCeEEEecCCCchhHHHHHhhcC-CeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccc-cccccccC
Q 027388 84 RGDVVLDLACGKGGDLIKWDKAKI-GYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYE-VHLDKVLA 161 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~~~~-~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~~ 161 (224)
++.+|||+| |+|.++..++.... .+++++|+|+.+++.|++++. ..++. +++++++|+.+ ++..
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~--------~~g~~-~v~~~~~D~~~~l~~~---- 237 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAAN--------EIGYE-DIEIFTFDLRKPLPDY---- 237 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHH--------HHTCC-CEEEECCCTTSCCCTT----
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHH--------HcCCC-CEEEEEChhhhhchhh----
Confidence 578999999 99999999876654 699999999999999999976 22334 69999999987 4320
Q ss_pred CCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCe-EEEEEeCC----h---HHHHHHhh-hccc
Q 027388 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGG-TFIGTMPD----A---NVIIKKLR-EEHF 221 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG-~li~~~~~----~---~~~~~~~~-~~gf 221 (224)
..+.||+|+++..++. .....++.++.++|+||| .+++++.. . ..+.+.+. +.||
T Consensus 238 ~~~~fD~Vi~~~p~~~-----~~~~~~l~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~ 301 (373)
T 2qm3_A 238 ALHKFDTFITDPPETL-----EAIRAFVGRGIATLKGPRCAGYFGITRRESSLDKWREIQKLLLNEFNV 301 (373)
T ss_dssp TSSCBSEEEECCCSSH-----HHHHHHHHHHHHTBCSTTCEEEEEECTTTCCHHHHHHHHHHHHHTSCC
T ss_pred ccCCccEEEECCCCch-----HHHHHHHHHHHHHcccCCeEEEEEEecCcCCHHHHHHHHHHHHHhcCc
Confidence 1368999999876553 235889999999999999 44665543 2 44555665 5665
No 208
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.46 E-value=3.8e-13 Score=107.12 Aligned_cols=116 Identities=15% Similarity=0.148 Sum_probs=84.8
Q ss_pred cCCCeEEEecCCCchhHHHHHhh-cCCeEEEEeCChhHHHHHHHhccCCcccccccccC-CCCeeEEecccccccccccc
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKF-SFPARLICGDCYEVHLDKVL 160 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~-~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~-~~~v~~~~~d~~~~~~~~~~ 160 (224)
..+.+|||||||+|..+..+++. ...++++||+++.+++.|++++... ...+ ..+++++++|+.+....
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~------~~~~~~~rv~v~~~D~~~~l~~--- 144 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSI------AGKLDDPRVDVQVDDGFMHIAK--- 144 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHH------HTTTTSTTEEEEESCSHHHHHT---
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhh------ccccCCCceEEEECcHHHHHhh---
Confidence 46789999999999999998865 4579999999999999999987410 0011 45799999998764211
Q ss_pred CCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCC
Q 027388 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~ 208 (224)
..+.||+|++...........-....+++.+.+.|+|||++++...+
T Consensus 145 -~~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~ 191 (275)
T 1iy9_A 145 -SENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDN 191 (275)
T ss_dssp -CCSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCC
T ss_pred -CCCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 25789999996543221000001257899999999999999998644
No 209
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.46 E-value=1.6e-13 Score=101.87 Aligned_cols=108 Identities=16% Similarity=0.210 Sum_probs=86.6
Q ss_pred hhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccccc
Q 027388 81 YARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (224)
...++.+|||+|||. +++|+|+.|++.|+++.. . ++.+.++|+.+++...
T Consensus 9 g~~~g~~vL~~~~g~---------------v~vD~s~~ml~~a~~~~~------------~-~~~~~~~d~~~~~~~~-- 58 (176)
T 2ld4_A 9 GISAGQFVAVVWDKS---------------SPVEALKGLVDKLQALTG------------N-EGRVSVENIKQLLQSA-- 58 (176)
T ss_dssp TCCTTSEEEEEECTT---------------SCHHHHHHHHHHHHHHTT------------T-TSEEEEEEGGGGGGGC--
T ss_pred CCCCCCEEEEecCCc---------------eeeeCCHHHHHHHHHhcc------------c-CcEEEEechhcCcccc--
Confidence 356889999999996 239999999999998865 1 3889999998765411
Q ss_pred CCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCC------------hHHHHHHhhhccc
Q 027388 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD------------ANVIIKKLREEHF 221 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~------------~~~~~~~~~~~gf 221 (224)
.++++||+|++..+++|+. .+...++++++++|||||+|++..+. ...+...++++||
T Consensus 59 ~~~~~fD~V~~~~~l~~~~---~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 59 HKESSFDIILSGLVPGSTT---LHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp CCSSCEEEEEECCSTTCCC---CCCHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC
T ss_pred CCCCCEeEEEECChhhhcc---cCHHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC
Confidence 0367899999999999861 23578999999999999999997542 4578889999998
No 210
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.45 E-value=3e-13 Score=105.02 Aligned_cols=109 Identities=14% Similarity=0.108 Sum_probs=83.6
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhc--CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccc
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAK--IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKV 159 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~--~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 159 (224)
..++.+|||||||+|..+..++... ..+++++|+++.+++.|++++. ..++..++.++++|+.+... ..
T Consensus 70 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~--------~~g~~~~i~~~~~d~~~~l~-~l 140 (232)
T 3cbg_A 70 LTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQ--------KAGVAEKISLRLGPALATLE-QL 140 (232)
T ss_dssp HHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHH--------HHTCGGGEEEEESCHHHHHH-HH
T ss_pred hcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH--------HcCCCCcEEEEEcCHHHHHH-HH
Confidence 3567899999999999999988653 4689999999999999999875 23444568999999754311 01
Q ss_pred cCCC--CCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEe
Q 027388 160 LADD--APFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (224)
Q Consensus 160 ~~~~--~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~ 206 (224)
.... ++||+|++.... .....++..+.++|+|||++++..
T Consensus 141 ~~~~~~~~fD~V~~d~~~-------~~~~~~l~~~~~~LkpgG~lv~~~ 182 (232)
T 3cbg_A 141 TQGKPLPEFDLIFIDADK-------RNYPRYYEIGLNLLRRGGLMVIDN 182 (232)
T ss_dssp HTSSSCCCEEEEEECSCG-------GGHHHHHHHHHHTEEEEEEEEEEC
T ss_pred HhcCCCCCcCEEEECCCH-------HHHHHHHHHHHHHcCCCeEEEEeC
Confidence 0012 789999987542 456789999999999999999863
No 211
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.45 E-value=4.6e-12 Score=99.48 Aligned_cols=131 Identities=8% Similarity=0.092 Sum_probs=83.1
Q ss_pred CCCeEEEecCCCchhHHHHHhh-cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCC
Q 027388 84 RGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~~-~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (224)
++.+|||+|||+|.++..++.. ...+++|+|+|+.+++.|++++. ..++..+++++++|+.+.-.......
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~--------~~~~~~~v~~~~~d~~~~~~~~~~~~ 136 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVE--------QNNLSDLIKVVKVPQKTLLMDALKEE 136 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHH--------HTTCTTTEEEEECCTTCSSTTTSTTC
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHH--------HcCCCccEEEEEcchhhhhhhhhhcc
Confidence 5679999999999999888764 34689999999999999999976 23444569999999765211000001
Q ss_pred -CCCeeEEEEcccccccc-C--C--------HHHHHHHH--------------------HHHHhhccCCeEEEEEeC---
Q 027388 163 -DAPFDICSCQFAMHYSW-S--T--------EARARRAL--------------------ANVSALLRPGGTFIGTMP--- 207 (224)
Q Consensus 163 -~~~~D~i~~~~~l~~~~-~--~--------~~~~~~~l--------------------~~~~~~lk~gG~li~~~~--- 207 (224)
.+.||+|+++..++... . . ......++ ....+.++++|+++....
T Consensus 137 ~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~~~~~~l~~~g~~~~~~~~~~ 216 (254)
T 2h00_A 137 SEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLGKKC 216 (254)
T ss_dssp CSCCBSEEEECCCCC-------------------------CTTTTHHHHTHHHHHHHHHHHHHHHGGGBSCEEEEESSTT
T ss_pred cCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHHHHHhcccceEEEEECCCChh
Confidence 25899999986544321 0 0 00011222 233445666666665432
Q ss_pred ChHHHHHHhhhcccc
Q 027388 208 DANVIIKKLREEHFC 222 (224)
Q Consensus 208 ~~~~~~~~~~~~gf~ 222 (224)
....+.+.++++||.
T Consensus 217 ~~~~~~~~l~~~Gf~ 231 (254)
T 2h00_A 217 SLAPLKEELRIQGVP 231 (254)
T ss_dssp SHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHcCCC
Confidence 225677888899985
No 212
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.45 E-value=7.5e-13 Score=106.82 Aligned_cols=114 Identities=18% Similarity=0.159 Sum_probs=81.9
Q ss_pred cCCCeEEEecCCCchhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccC-CCCeeEEecccccccccccc
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKF-SFPARLICGDCYEVHLDKVL 160 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~-~~~v~~~~~d~~~~~~~~~~ 160 (224)
..+.+|||||||+|..+..+++.. ..++++||+++.+++.|++++... ...+ ..+++++++|+.+....
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~------~~~~~~~rv~v~~~Da~~~l~~--- 164 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGM------AIGYSSSKLTLHVGDGFEFMKQ--- 164 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHH------HGGGGCTTEEEEESCHHHHHHT---
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHh------hcccCCCcEEEEECcHHHHHhh---
Confidence 467899999999999999988653 468999999999999999987510 0112 45689999998763211
Q ss_pred CCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEe
Q 027388 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~ 206 (224)
..++||+|++................+++.+.++|+|||+|++..
T Consensus 165 -~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 165 -NQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp -CSSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred -CCCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 357899999865433210000123578999999999999999876
No 213
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.45 E-value=4e-13 Score=106.84 Aligned_cols=103 Identities=17% Similarity=0.100 Sum_probs=83.5
Q ss_pred hcCCCeEEEecCCCchhHHHHHhh-cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccccc
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~-~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (224)
..++.+|||+|||+|.++..++.. ...+++++|+++.+++.|++++.. .++. ++.++++|+.+. .
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~--------n~l~-~~~~~~~d~~~~-~---- 182 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKL--------NKLN-NVIPILADNRDV-E---- 182 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHH--------TTCS-SEEEEESCGGGC-C----
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHH--------cCCC-CEEEEECChHHc-C----
Confidence 467889999999999999999865 356899999999999999998863 2232 488999999876 2
Q ss_pred CCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeC
Q 027388 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~ 207 (224)
..+.||+|++.... ....++..+.+.|+|||+++++..
T Consensus 183 -~~~~~D~Vi~d~p~--------~~~~~l~~~~~~LkpgG~l~~s~~ 220 (272)
T 3a27_A 183 -LKDVADRVIMGYVH--------KTHKFLDKTFEFLKDRGVIHYHET 220 (272)
T ss_dssp -CTTCEEEEEECCCS--------SGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred -ccCCceEEEECCcc--------cHHHHHHHHHHHcCCCCEEEEEEc
Confidence 24689999987653 345688899999999999998744
No 214
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.45 E-value=1.1e-13 Score=109.55 Aligned_cols=109 Identities=13% Similarity=0.083 Sum_probs=74.7
Q ss_pred hhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEE--ecccccccccc
Q 027388 81 YARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLI--CGDCYEVHLDK 158 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~--~~d~~~~~~~~ 158 (224)
...++.+|||||||+|.++..+++. .+|+|||+++ |+..+..... .......++.++ ++|+.+++
T Consensus 71 ~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~~~a~~~~~-------~~~~~~~~v~~~~~~~D~~~l~--- 137 (265)
T 2oxt_A 71 YVELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LGVGGHEVPR-------ITESYGWNIVKFKSRVDIHTLP--- 137 (265)
T ss_dssp SCCCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CCCSSCCCCC-------CCCBTTGGGEEEECSCCTTTSC---
T ss_pred CCCCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hhhhhhhhhh-------hhhccCCCeEEEecccCHhHCC---
Confidence 3457889999999999999988765 7999999998 5322211100 001122258888 88988753
Q ss_pred ccCCCCCeeEEEEccccccccCCHHHH---HHHHHHHHhhccCCe--EEEEEeC
Q 027388 159 VLADDAPFDICSCQFAMHYSWSTEARA---RRALANVSALLRPGG--TFIGTMP 207 (224)
Q Consensus 159 ~~~~~~~~D~i~~~~~l~~~~~~~~~~---~~~l~~~~~~lk~gG--~li~~~~ 207 (224)
+++||+|+|..+ ++......+. ..++..+.++|+||| .|++.+.
T Consensus 138 ----~~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~ 186 (265)
T 2oxt_A 138 ----VERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVL 186 (265)
T ss_dssp ----CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred ----CCCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeC
Confidence 468999999876 4321111111 237899999999999 9998764
No 215
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.45 E-value=5.1e-13 Score=106.82 Aligned_cols=114 Identities=14% Similarity=0.160 Sum_probs=85.6
Q ss_pred cCCCeEEEecCCCchhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccC-CCCeeEEecccccccccccc
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKF-SFPARLICGDCYEVHLDKVL 160 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~-~~~v~~~~~d~~~~~~~~~~ 160 (224)
.++.+|||||||+|..+..+++.. ..+++++|+++.+++.|++++.... ..+ ..+++++++|+.+....
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~------~~~~~~~v~~~~~D~~~~l~~--- 147 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNIS------CGYEDKRVNVFIEDASKFLEN--- 147 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTS------GGGGSTTEEEEESCHHHHHHH---
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhc------cccCCCcEEEEECChHHHHHh---
Confidence 467899999999999999987653 4689999999999999999876210 011 35689999998764321
Q ss_pred CCCCCeeEEEEccccccccCCHHHH--HHHHHHHHhhccCCeEEEEEeCC
Q 027388 161 ADDAPFDICSCQFAMHYSWSTEARA--RRALANVSALLRPGGTFIGTMPD 208 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~~~~~~~~--~~~l~~~~~~lk~gG~li~~~~~ 208 (224)
..+.||+|++.....+. ..... ..+++.+.++|+|||++++...+
T Consensus 148 -~~~~fD~Ii~d~~~~~~--~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 194 (283)
T 2i7c_A 148 -VTNTYDVIIVDSSDPIG--PAETLFNQNFYEKIYNALKPNGYCVAQCES 194 (283)
T ss_dssp -CCSCEEEEEEECCCTTT--GGGGGSSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred -CCCCceEEEEcCCCCCC--cchhhhHHHHHHHHHHhcCCCcEEEEECCC
Confidence 25789999986543321 11222 68999999999999999998653
No 216
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.45 E-value=4.9e-13 Score=104.21 Aligned_cols=110 Identities=11% Similarity=0.053 Sum_probs=84.7
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhc--CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccc
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAK--IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKV 159 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~--~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 159 (224)
..++++|||||||+|..+..++... ..+++++|+++.+++.|++++. ..++..+++++++|+.+......
T Consensus 68 ~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~--------~~g~~~~i~~~~gda~~~l~~l~ 139 (237)
T 3c3y_A 68 LVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIR--------KAGVEHKINFIESDAMLALDNLL 139 (237)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHH--------HTTCGGGEEEEESCHHHHHHHHH
T ss_pred hhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH--------HcCCCCcEEEEEcCHHHHHHHHH
Confidence 3577899999999999999988652 5799999999999999999886 23445569999999875421000
Q ss_pred c--CCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEe
Q 027388 160 L--ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (224)
Q Consensus 160 ~--~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~ 206 (224)
. ...++||+|++.... .....+++.+.++|+|||++++..
T Consensus 140 ~~~~~~~~fD~I~~d~~~-------~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 140 QGQESEGSYDFGFVDADK-------PNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp HSTTCTTCEEEEEECSCG-------GGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred hccCCCCCcCEEEECCch-------HHHHHHHHHHHHhcCCCeEEEEec
Confidence 0 014689999987432 456789999999999999999864
No 217
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.44 E-value=3.9e-13 Score=103.89 Aligned_cols=108 Identities=19% Similarity=0.177 Sum_probs=83.5
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhc--CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccc
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAK--IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKV 159 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~--~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 159 (224)
..++.+|||||||+|..+..++... ..+++++|+++.+++.|++++. ..++..++.++++|+.+.... .
T Consensus 67 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~--------~~g~~~~i~~~~~d~~~~~~~-~ 137 (229)
T 2avd_A 67 LIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWR--------QAEAEHKIDLRLKPALETLDE-L 137 (229)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHH--------HTTCTTTEEEEESCHHHHHHH-H
T ss_pred hcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH--------HCCCCCeEEEEEcCHHHHHHH-H
Confidence 4578899999999999999988642 5689999999999999999876 234445799999998654210 0
Q ss_pred cCC--CCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 160 LAD--DAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 160 ~~~--~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
... .++||+|++.... .....++..+.++|+|||++++.
T Consensus 138 ~~~~~~~~~D~v~~d~~~-------~~~~~~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 138 LAAGEAGTFDVAVVDADK-------ENCSAYYERCLQLLRPGGILAVL 178 (229)
T ss_dssp HHTTCTTCEEEEEECSCS-------TTHHHHHHHHHHHEEEEEEEEEE
T ss_pred HhcCCCCCccEEEECCCH-------HHHHHHHHHHHHHcCCCeEEEEE
Confidence 001 1689999987542 34578899999999999999985
No 218
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.43 E-value=1.5e-13 Score=109.41 Aligned_cols=108 Identities=13% Similarity=0.081 Sum_probs=74.4
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEE--eccccccccccc
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLI--CGDCYEVHLDKV 159 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~--~~d~~~~~~~~~ 159 (224)
..++.+|||+|||+|.++..+++. .+|+|||+|+ |+..++..... ......++.++ ++|+.+++
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~~~a~~~~~~-------~~~~~~~v~~~~~~~D~~~l~---- 145 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LGTSGHEKPRL-------VETFGWNLITFKSKVDVTKME---- 145 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CCCTTSCCCCC-------CCCTTGGGEEEECSCCGGGCC----
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hhhhhhhchhh-------hhhcCCCeEEEeccCcHhhCC----
Confidence 456789999999999999988765 6999999998 54332211100 01122368888 88987753
Q ss_pred cCCCCCeeEEEEccccccccCCHHH-H--HHHHHHHHhhccCCe--EEEEEeC
Q 027388 160 LADDAPFDICSCQFAMHYSWSTEAR-A--RRALANVSALLRPGG--TFIGTMP 207 (224)
Q Consensus 160 ~~~~~~~D~i~~~~~l~~~~~~~~~-~--~~~l~~~~~~lk~gG--~li~~~~ 207 (224)
.++||+|+|..+ ++......+ . ..++..+.++|+||| .|++.+.
T Consensus 146 ---~~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~ 194 (276)
T 2wa2_A 146 ---PFQADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVL 194 (276)
T ss_dssp ---CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEES
T ss_pred ---CCCcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeC
Confidence 468999999877 432111111 1 137899999999999 9988654
No 219
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.43 E-value=6.6e-13 Score=109.34 Aligned_cols=99 Identities=13% Similarity=0.100 Sum_probs=80.7
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccccc
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (224)
..++.+|||||||+|.++..+++.. ..+++++|+ +.+++.+++. .+++++.+|+.+ +.
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~---------------~~v~~~~~d~~~-~~---- 244 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS---------------NNLTYVGGDMFT-SI---- 244 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB---------------TTEEEEECCTTT-CC----
T ss_pred cccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC---------------CCcEEEeccccC-CC----
Confidence 4567899999999999999988653 458999999 8888776531 138999999865 33
Q ss_pred CCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccC---CeEEEEEe
Q 027388 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRP---GGTFIGTM 206 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~---gG~li~~~ 206 (224)
+ .||+|++..++|++ +..+...++++++++|+| ||+|++..
T Consensus 245 -p--~~D~v~~~~~lh~~--~d~~~~~~l~~~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 245 -P--NADAVLLKYILHNW--TDKDCLRILKKCKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp -C--CCSEEEEESCGGGS--CHHHHHHHHHHHHHHHSGGGCCCEEEEEE
T ss_pred -C--CccEEEeehhhccC--CHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 2 39999999999998 555666999999999999 99988863
No 220
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.43 E-value=1.6e-12 Score=104.60 Aligned_cols=115 Identities=17% Similarity=0.129 Sum_probs=82.7
Q ss_pred cCCCeEEEecCCCchhHHHHHhh-cCCeEEEEeCChhHHHHHHHhccCCcccccccccC-CCCeeEEecccccccccccc
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKF-SFPARLICGDCYEVHLDKVL 160 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~-~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~-~~~v~~~~~d~~~~~~~~~~ 160 (224)
..+.+|||||||+|..+..+++. ...+++++|+++.+++.|++++... ...+ ..+++++++|+.+....
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~------~~~~~~~~v~~~~~D~~~~l~~--- 159 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQT------SCGFDDPRAEIVIANGAEYVRK--- 159 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHH------HGGGGCTTEEEEESCHHHHGGG---
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhh------ccccCCCceEEEECcHHHHHhh---
Confidence 45689999999999999998865 4578999999999999999987410 0112 35699999998664211
Q ss_pred CCCCCeeEEEEccccccccCCHH--HHHHHHHHHHhhccCCeEEEEEeCC
Q 027388 161 ADDAPFDICSCQFAMHYSWSTEA--RARRALANVSALLRPGGTFIGTMPD 208 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~~~~~~--~~~~~l~~~~~~lk~gG~li~~~~~ 208 (224)
..+.||+|++...-.++ .... ....+++.+.++|+|||++++.+.+
T Consensus 160 -~~~~fD~Ii~d~~~~~~-~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 207 (296)
T 1inl_A 160 -FKNEFDVIIIDSTDPTA-GQGGHLFTEEFYQACYDALKEDGVFSAETED 207 (296)
T ss_dssp -CSSCEEEEEEEC-----------CCSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred -CCCCceEEEEcCCCccc-CchhhhhHHHHHHHHHHhcCCCcEEEEEccC
Confidence 35689999986432211 0001 1268899999999999999998654
No 221
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.43 E-value=1e-12 Score=106.39 Aligned_cols=113 Identities=19% Similarity=0.188 Sum_probs=81.5
Q ss_pred cCCCeEEEecCCCchhHHHHHhh-cCCeEEEEeCChhHHHHHHHhccCCcccccccccC-CCCeeEEecccccccccccc
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKF-SFPARLICGDCYEVHLDKVL 160 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~-~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~-~~~v~~~~~d~~~~~~~~~~ 160 (224)
..+.+|||||||+|..+..+++. ...+++++|+++.+++.|++++.... .++ ..+++++++|+.+....
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~------~~~~~~rv~~~~~D~~~~l~~--- 177 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMS------CGFSHPKLDLFCGDGFEFLKN--- 177 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTS------GGGGCTTEEEECSCHHHHHHH---
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhc------cccCCCCEEEEEChHHHHHHh---
Confidence 46789999999999999998765 34689999999999999999886210 012 45689999998764211
Q ss_pred CCCCCeeEEEEccccccccCCHHHH--HHHHHHHHhhccCCeEEEEEeC
Q 027388 161 ADDAPFDICSCQFAMHYSWSTEARA--RRALANVSALLRPGGTFIGTMP 207 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~~~~~~~~--~~~l~~~~~~lk~gG~li~~~~ 207 (224)
..+.||+|++...-... ..... ..+++.+.++|+|||++++...
T Consensus 178 -~~~~fD~Ii~d~~~~~~--~~~~l~t~~~l~~~~~~LkpgG~lv~~~~ 223 (314)
T 2b2c_A 178 -HKNEFDVIITDSSDPVG--PAESLFGQSYYELLRDALKEDGILSSQGE 223 (314)
T ss_dssp -CTTCEEEEEECCC---------------HHHHHHHHEEEEEEEEEECC
T ss_pred -cCCCceEEEEcCCCCCC--cchhhhHHHHHHHHHhhcCCCeEEEEECC
Confidence 35789999986542211 11122 6899999999999999999863
No 222
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.43 E-value=4.9e-13 Score=107.00 Aligned_cols=113 Identities=20% Similarity=0.333 Sum_probs=82.8
Q ss_pred HHHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccc
Q 027388 72 WIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDC 151 (224)
Q Consensus 72 ~~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~ 151 (224)
.+..++......++.+|||||||+|.++..++.. ..+++++|+|+.+++.+++++.. .+...+++++++|+
T Consensus 16 i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~-~~~v~~vD~~~~~~~~a~~~~~~--------~~~~~~v~~~~~D~ 86 (285)
T 1zq9_A 16 IINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEK-AKKVVACELDPRLVAELHKRVQG--------TPVASKLQVLVGDV 86 (285)
T ss_dssp HHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHH-SSEEEEEESCHHHHHHHHHHHTT--------STTGGGEEEEESCT
T ss_pred HHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhh-CCEEEEEECCHHHHHHHHHHHHh--------cCCCCceEEEEcce
Confidence 3444555555667889999999999999999865 45999999999999999998752 12234689999999
Q ss_pred cccccccccCCCCCeeEEEEccccccccCCHHHHHHHHH--------------HH--HhhccCCeEEE
Q 027388 152 YEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALA--------------NV--SALLRPGGTFI 203 (224)
Q Consensus 152 ~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~--------------~~--~~~lk~gG~li 203 (224)
.+.+. ..||+|+++..+++. .+....++. ++ +++++|||.++
T Consensus 87 ~~~~~-------~~fD~vv~nlpy~~~---~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 87 LKTDL-------PFFDTCVANLPYQIS---SPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp TTSCC-------CCCSEEEEECCGGGH---HHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred ecccc-------hhhcEEEEecCcccc---hHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 87754 379999998776653 233333432 22 36889999764
No 223
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.43 E-value=1.1e-12 Score=98.73 Aligned_cols=116 Identities=18% Similarity=0.176 Sum_probs=78.2
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhcC----------CeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEE-ecc
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAKI----------GYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLI-CGD 150 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~~----------~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~-~~d 150 (224)
..++.+|||+|||+|.++..++.... .+++++|+|+.. . ..+++++ .+|
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~--------~------------~~~~~~~~~~d 79 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF--------P------------LEGATFLCPAD 79 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC--------C------------CTTCEEECSCC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc--------c------------CCCCeEEEecc
Confidence 45788999999999999999887632 689999999831 0 1247788 888
Q ss_pred ccccccccc---cCCCCCeeEEEEccccccccCCHHHH-------HHHHHHHHhhccCCeEEEEEeCCh---HHHHHHhh
Q 027388 151 CYEVHLDKV---LADDAPFDICSCQFAMHYSWSTEARA-------RRALANVSALLRPGGTFIGTMPDA---NVIIKKLR 217 (224)
Q Consensus 151 ~~~~~~~~~---~~~~~~~D~i~~~~~l~~~~~~~~~~-------~~~l~~~~~~lk~gG~li~~~~~~---~~~~~~~~ 217 (224)
+........ ..+.++||+|++..++++......+. ..++.++.++|+|||.|++.+... ..+...+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~ 159 (196)
T 2nyu_A 80 VTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQSRRLQRRLT 159 (196)
T ss_dssp TTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGGGHHHHHHHH
T ss_pred CCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCccHHHHHHHHH
Confidence 765432100 00235899999976544321111222 578999999999999999986643 34444443
No 224
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.43 E-value=1.7e-12 Score=108.49 Aligned_cols=116 Identities=14% Similarity=0.093 Sum_probs=87.9
Q ss_pred cCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccC-CCCeeEEeccccccccccccC
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKF-SFPARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~-~~~v~~~~~d~~~~~~~~~~~ 161 (224)
.++.+|||+|||+|.++..++..+..+++++|+|+.+++.|++++.. .++ ..+++++++|+.+.... ...
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~--------ngl~~~~v~~~~~D~~~~~~~-~~~ 289 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVEL--------NKLDLSKAEFVRDDVFKLLRT-YRD 289 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHH--------TTCCGGGEEEEESCHHHHHHH-HHH
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH--------cCCCccceEEEECCHHHHHHH-HHh
Confidence 57889999999999999999876667999999999999999999862 333 33689999998765321 000
Q ss_pred CCCCeeEEEEccccc-----cccCCHHHHHHHHHHHHhhccCCeEEEEEeC
Q 027388 162 DDAPFDICSCQFAMH-----YSWSTEARARRALANVSALLRPGGTFIGTMP 207 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~-----~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~ 207 (224)
....||+|++..... .+.........++..+.+.|+|||++++++.
T Consensus 290 ~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 340 (396)
T 3c0k_A 290 RGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSC 340 (396)
T ss_dssp TTCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred cCCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 146899999874321 1111225778899999999999999998754
No 225
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.43 E-value=7.3e-13 Score=107.66 Aligned_cols=114 Identities=13% Similarity=0.151 Sum_probs=84.6
Q ss_pred cCCCeEEEecCCCchhHHHHHhh-cCCeEEEEeCChhHHHHHHHhccCCcccccccccC-CCCeeEEecccccccccccc
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKF-SFPARLICGDCYEVHLDKVL 160 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~-~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~-~~~v~~~~~d~~~~~~~~~~ 160 (224)
..+.+|||||||+|..+..+++. ...+++++|+|+.+++.|++++.... ..+ ..+++++++|+.+....
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~------~~~~~~~v~~~~~D~~~~l~~--- 185 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNIS------CGYEDKRVNVFIEDASKFLEN--- 185 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTS------GGGGSTTEEEEESCHHHHHHH---
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhc------cccCCCcEEEEEccHHHHHhh---
Confidence 46789999999999999998865 35689999999999999999976210 112 35699999998764211
Q ss_pred CCCCCeeEEEEccccccccCCHHHH--HHHHHHHHhhccCCeEEEEEeCC
Q 027388 161 ADDAPFDICSCQFAMHYSWSTEARA--RRALANVSALLRPGGTFIGTMPD 208 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~~~~~~~~--~~~l~~~~~~lk~gG~li~~~~~ 208 (224)
..+.||+|++...-.+. ..... ..+++.+.+.|+|||++++...+
T Consensus 186 -~~~~fDvIi~d~~~p~~--~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 186 -VTNTYDVIIVDSSDPIG--PAETLFNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp -CCSCEEEEEEECCCSSS--GGGGGSSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred -cCCCceEEEECCcCCCC--cchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 24789999986532111 11111 68999999999999999997543
No 226
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.43 E-value=9.1e-13 Score=107.53 Aligned_cols=115 Identities=17% Similarity=0.187 Sum_probs=83.4
Q ss_pred cCCCeEEEecCCCchhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccC-CCCeeEEecccccccccccc
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKF-SFPARLICGDCYEVHLDKVL 160 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~-~~~v~~~~~d~~~~~~~~~~ 160 (224)
..+.+|||||||+|..+..+++.. ..++++||+|+.+++.|++++... ..++ ..+++++++|+.+.... .
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~------~~gl~~~rv~~~~~D~~~~l~~-~- 190 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDV------AIGYEDPRVNLVIGDGVAFLKN-A- 190 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHH------HGGGGSTTEEEEESCHHHHHHT-S-
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhh------ccccCCCcEEEEECCHHHHHHh-c-
Confidence 467899999999999999988653 468999999999999999987510 0012 34699999998764210 0
Q ss_pred CCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEe
Q 027388 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~ 206 (224)
..++||+|++.....+..........+++.+.++|+|||+|++..
T Consensus 191 -~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 191 -AEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp -CTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred -cCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 246899999865421110000114689999999999999999963
No 227
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.42 E-value=7.4e-13 Score=107.39 Aligned_cols=114 Identities=18% Similarity=0.140 Sum_probs=84.6
Q ss_pred cCCCeEEEecCCCchhHHHHHhh-cCCeEEEEeCChhHHHHHHHhccCCccccccccc-C-CCCeeEEeccccccccccc
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKK-F-SFPARLICGDCYEVHLDKV 159 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~-~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~-~-~~~v~~~~~d~~~~~~~~~ 159 (224)
..+.+|||||||+|..+..+++. ...++++||+++.+++.|++++... ..+ + ..+++++++|+.+....
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~------~~~~~~~~~v~~~~~D~~~~l~~-- 147 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEW------HQGAFDDPRAVLVIDDARAYLER-- 147 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHH------HTTGGGCTTEEEEESCHHHHHHH--
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhh------ccccccCCceEEEEchHHHHHHh--
Confidence 46789999999999999998865 3568999999999999999987510 001 1 35699999998764211
Q ss_pred cCCCCCeeEEEEcccccccc-CCHHH--HHHHHHHHHhhccCCeEEEEEe
Q 027388 160 LADDAPFDICSCQFAMHYSW-STEAR--ARRALANVSALLRPGGTFIGTM 206 (224)
Q Consensus 160 ~~~~~~~D~i~~~~~l~~~~-~~~~~--~~~~l~~~~~~lk~gG~li~~~ 206 (224)
..++||+|++....++.. ..... ...+++.+.++|+|||++++..
T Consensus 148 --~~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 148 --TEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp --CCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred --cCCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 357899999986654300 01111 3689999999999999999874
No 228
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.42 E-value=3.6e-12 Score=101.18 Aligned_cols=102 Identities=10% Similarity=0.033 Sum_probs=84.5
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccC
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (224)
..++.+|||+|||+|.+++.++..+..+|+++|+++.+++.+++++. ..++..+++++++|+.++..
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~--------~N~v~~~v~~~~~D~~~~~~----- 189 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIH--------LNKVEDRMSAYNMDNRDFPG----- 189 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHH--------HTTCTTTEEEECSCTTTCCC-----
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHH--------HcCCCCcEEEEeCcHHHhcc-----
Confidence 46789999999999999999987777799999999999999999987 45667789999999987753
Q ss_pred CCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
.+.||.|+++.... ...++..+.++|++||++.+.
T Consensus 190 -~~~~D~Vi~~~p~~--------~~~~l~~a~~~lk~gG~ih~~ 224 (278)
T 3k6r_A 190 -ENIADRILMGYVVR--------THEFIPKALSIAKDGAIIHYH 224 (278)
T ss_dssp -CSCEEEEEECCCSS--------GGGGHHHHHHHEEEEEEEEEE
T ss_pred -ccCCCEEEECCCCc--------HHHHHHHHHHHcCCCCEEEEE
Confidence 57899999765321 235677788999999998763
No 229
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.42 E-value=6e-13 Score=111.28 Aligned_cols=117 Identities=20% Similarity=0.174 Sum_probs=87.9
Q ss_pred cCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCC
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (224)
.++.+|||+|||+|.++..++..+..+++++|+|+.+++.|++++.. .++..++.++++|+.+.... ....
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~--------n~~~~~v~~~~~d~~~~~~~-~~~~ 286 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKL--------NGVEDRMKFIVGSAFEEMEK-LQKK 286 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHH--------TTCGGGEEEEESCHHHHHHH-HHHT
T ss_pred hCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHH--------cCCCccceEEECCHHHHHHH-HHhh
Confidence 37889999999999999999866566999999999999999999872 33443689999998765321 0002
Q ss_pred CCCeeEEEEccccccc-----cCCHHHHHHHHHHHHhhccCCeEEEEEeCC
Q 027388 163 DAPFDICSCQFAMHYS-----WSTEARARRALANVSALLRPGGTFIGTMPD 208 (224)
Q Consensus 163 ~~~~D~i~~~~~l~~~-----~~~~~~~~~~l~~~~~~lk~gG~li~~~~~ 208 (224)
...||+|++....... +........++..+.++|+|||.+++.+.+
T Consensus 287 ~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 337 (396)
T 2as0_A 287 GEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS 337 (396)
T ss_dssp TCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred CCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 4689999986432110 001256788999999999999999888654
No 230
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.41 E-value=1.8e-12 Score=97.65 Aligned_cols=115 Identities=19% Similarity=0.196 Sum_probs=78.7
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccccc-
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL- 160 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~- 160 (224)
..++.+|||+|||+|.++..+++. ...|+|+|+++.. . ..++.++++|+.+.......
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~~--------~------------~~~v~~~~~D~~~~~~~~~~~ 81 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEME--------E------------IAGVRFIRCDIFKETIFDDID 81 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCCC--------C------------CTTCEEEECCTTSSSHHHHHH
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc-CCcEEEEeccccc--------c------------CCCeEEEEccccCHHHHHHHH
Confidence 357889999999999999998866 6799999999731 1 22589999998875421100
Q ss_pred --CC---CCCeeEEEEcccccccc-------CCHHHHHHHHHHHHhhccCCeEEEEEeCCh---HHHHHHhh
Q 027388 161 --AD---DAPFDICSCQFAMHYSW-------STEARARRALANVSALLRPGGTFIGTMPDA---NVIIKKLR 217 (224)
Q Consensus 161 --~~---~~~~D~i~~~~~l~~~~-------~~~~~~~~~l~~~~~~lk~gG~li~~~~~~---~~~~~~~~ 217 (224)
.. .+.||+|++.......- ........++..+.++|||||.|++.+... ..+...++
T Consensus 82 ~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~~~~~~~l~ 153 (191)
T 3dou_A 82 RALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMTNDFIAIWR 153 (191)
T ss_dssp HHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTHHHHHHHHHG
T ss_pred HHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCCHHHHHHHHH
Confidence 00 14899999976432110 011224678899999999999999876533 34555553
No 231
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.38 E-value=8.7e-13 Score=106.42 Aligned_cols=106 Identities=20% Similarity=0.227 Sum_probs=73.2
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeC----ChhHHHHHHHhccCCcccccccccC-CCCeeEEec-cccccc
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDI----AEGSIEDCRTRYNGDADHHQRRKKF-SFPARLICG-DCYEVH 155 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~----s~~~~~~a~~~~~~~~~~~~~~~~~-~~~v~~~~~-d~~~~~ 155 (224)
..++.+|||||||+|.++..+++. +.|+|||+ ++.+++.+ ... .. ..++.++++ |+..++
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~--~~~----------~~~~~~v~~~~~~D~~~l~ 145 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPI--PMS----------TYGWNLVRLQSGVDVFFIP 145 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCC--CCC----------STTGGGEEEECSCCTTTSC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHH--Hhh----------hcCCCCeEEEeccccccCC
Confidence 456789999999999999988765 58999999 55443211 011 11 235888888 876653
Q ss_pred cccccCCCCCeeEEEEccccc---cccCCHHHHHHHHHHHHhhccCCeEEEEEeCCh
Q 027388 156 LDKVLADDAPFDICSCQFAMH---YSWSTEARARRALANVSALLRPGGTFIGTMPDA 209 (224)
Q Consensus 156 ~~~~~~~~~~~D~i~~~~~l~---~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~ 209 (224)
..+||+|+|..+++ +.. .......+|..+.++|||||.|++.+...
T Consensus 146 -------~~~fD~V~sd~~~~~g~~~~-d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 146 -------PERCDTLLCDIGESSPNPTV-EAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp -------CCCCSEEEECCCCCCSSHHH-HHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred -------cCCCCEEEECCccccCcchh-hHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 36899999987653 210 00111257889999999999999986644
No 232
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.38 E-value=2.1e-12 Score=99.36 Aligned_cols=101 Identities=14% Similarity=0.042 Sum_probs=80.8
Q ss_pred cCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCC
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (224)
.++.+|||||||+|-++..+. ....|+++|+++.+++.+++++..+ +.+..+..+|....+.
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~----------g~~~~~~v~D~~~~~~------ 165 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREK----------DWDFTFALQDVLCAPP------ 165 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHT----------TCEEEEEECCTTTSCC------
T ss_pred CCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhc----------CCCceEEEeecccCCC------
Confidence 468899999999999998876 6679999999999999999997622 3457899999877664
Q ss_pred CCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEE
Q 027388 163 DAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIG 204 (224)
Q Consensus 163 ~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~ 204 (224)
.++||+|++.-++|++ . .......-++...|+++|+++-
T Consensus 166 ~~~~DvvLllk~lh~L--E-~q~~~~~~~ll~aL~~~~vvVs 204 (253)
T 3frh_A 166 AEAGDLALIFKLLPLL--E-REQAGSAMALLQSLNTPRMAVS 204 (253)
T ss_dssp CCBCSEEEEESCHHHH--H-HHSTTHHHHHHHHCBCSEEEEE
T ss_pred CCCcchHHHHHHHHHh--h-hhchhhHHHHHHHhcCCCEEEE
Confidence 5799999999999987 2 2223344488889999877663
No 233
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.37 E-value=6.3e-13 Score=103.22 Aligned_cols=99 Identities=11% Similarity=0.079 Sum_probs=66.5
Q ss_pred CCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEE-eccccccccccccCC
Q 027388 84 RGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLI-CGDCYEVHLDKVLAD 162 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~-~~d~~~~~~~~~~~~ 162 (224)
.+.+|||||||+|.++..+++.+..+|+|+|+|+.|++.++++... +... ..++........ .
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~--------------~~~~~~~~~~~~~~~~~--~ 100 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDER--------------VVVMEQFNFRNAVLADF--E 100 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTT--------------EEEECSCCGGGCCGGGC--C
T ss_pred CCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCcc--------------ccccccceEEEeCHhHc--C
Confidence 4679999999999999998877556999999999999998776441 1111 111111110000 1
Q ss_pred CCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 163 DAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 163 ~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
...+|.+.+..++..+ ..++.++.++|||||.+++.
T Consensus 101 ~~~~d~~~~D~v~~~l-------~~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 101 QGRPSFTSIDVSFISL-------DLILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp SCCCSEEEECCSSSCG-------GGTHHHHHHHSCTTCEEEEE
T ss_pred cCCCCEEEEEEEhhhH-------HHHHHHHHHhccCCCEEEEE
Confidence 1234555555544332 56899999999999998886
No 234
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.37 E-value=6.1e-12 Score=106.81 Aligned_cols=127 Identities=17% Similarity=0.155 Sum_probs=89.5
Q ss_pred hhcCCCeEEEecCCCchhHHHHHhhc--CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccc
Q 027388 81 YARRGDVVLDLACGKGGDLIKWDKAK--IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK 158 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~G~~~~~l~~~~--~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 158 (224)
...++.+|||+|||+|..+..++... .+.++++|+|+.+++.+++++.. .++ .++.++++|+...+..
T Consensus 256 ~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~--------~g~-~~v~~~~~D~~~~~~~- 325 (450)
T 2yxl_A 256 DPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKR--------MGI-KIVKPLVKDARKAPEI- 325 (450)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHH--------TTC-CSEEEECSCTTCCSSS-
T ss_pred CCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHH--------cCC-CcEEEEEcChhhcchh-
Confidence 45678899999999999999988642 36899999999999999998762 222 2589999998776521
Q ss_pred ccCCCCCeeEEEEc------cccccccC-----CH-------HHHHHHHHHHHhhccCCeEEEEEeCC------hHHHHH
Q 027388 159 VLADDAPFDICSCQ------FAMHYSWS-----TE-------ARARRALANVSALLRPGGTFIGTMPD------ANVIIK 214 (224)
Q Consensus 159 ~~~~~~~~D~i~~~------~~l~~~~~-----~~-------~~~~~~l~~~~~~lk~gG~li~~~~~------~~~~~~ 214 (224)
...+.||+|++. +++....+ +. ..+..++..+.++|||||.|++++.. ...+..
T Consensus 326 --~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~ene~~v~~ 403 (450)
T 2yxl_A 326 --IGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEKNIRW 403 (450)
T ss_dssp --SCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHH
T ss_pred --hccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhhHHHHHHH
Confidence 023689999963 22222100 00 11267899999999999999987652 234445
Q ss_pred Hhhhc
Q 027388 215 KLREE 219 (224)
Q Consensus 215 ~~~~~ 219 (224)
.+.+.
T Consensus 404 ~l~~~ 408 (450)
T 2yxl_A 404 FLNVH 408 (450)
T ss_dssp HHHHC
T ss_pred HHHhC
Confidence 55554
No 235
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.36 E-value=1.1e-12 Score=109.25 Aligned_cols=114 Identities=13% Similarity=0.165 Sum_probs=85.7
Q ss_pred CCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCCC
Q 027388 84 RGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADD 163 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 163 (224)
++.+|||+|||+|.++..++.. ..+++++|+|+.+++.|++++.. .++.. +.++++|+.+.... .....
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~--------n~~~~-~~~~~~d~~~~~~~-~~~~~ 277 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARL--------NGLGN-VRVLEANAFDLLRR-LEKEG 277 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHH--------TTCTT-EEEEESCHHHHHHH-HHHTT
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHH--------cCCCC-ceEEECCHHHHHHH-HHhcC
Confidence 6789999999999999999876 66899999999999999999862 23333 89999998765321 00024
Q ss_pred CCeeEEEEcccccc-----ccCCHHHHHHHHHHHHhhccCCeEEEEEeCC
Q 027388 164 APFDICSCQFAMHY-----SWSTEARARRALANVSALLRPGGTFIGTMPD 208 (224)
Q Consensus 164 ~~~D~i~~~~~l~~-----~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~ 208 (224)
..||+|++...... +.........++..+.++|+|||+|++++..
T Consensus 278 ~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 278 ERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp CCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCeeEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 68999998643211 0011256788999999999999999998653
No 236
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.35 E-value=3.2e-12 Score=105.46 Aligned_cols=98 Identities=13% Similarity=0.143 Sum_probs=79.1
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccccc
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (224)
..+..+|||||||+|.++..+++.. ..+++++|+ +.+++.+++. .+++++.+|+.+ +.
T Consensus 191 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~---------------~~v~~~~~d~~~-~~---- 249 (358)
T 1zg3_A 191 FEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTGN---------------ENLNFVGGDMFK-SI---- 249 (358)
T ss_dssp HHTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCCC---------------SSEEEEECCTTT-CC----
T ss_pred ccCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhcccC---------------CCcEEEeCccCC-CC----
Confidence 3467899999999999999988764 347999999 6777655431 238999999876 43
Q ss_pred CCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccC---CeEEEEE
Q 027388 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRP---GGTFIGT 205 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~---gG~li~~ 205 (224)
+ .||+|++..++|++ +.++...+++++.++|+| ||+|++.
T Consensus 250 -~--~~D~v~~~~vlh~~--~d~~~~~~l~~~~~~L~p~~~gG~l~i~ 292 (358)
T 1zg3_A 250 -P--SADAVLLKWVLHDW--NDEQSLKILKNSKEAISHKGKDGKVIII 292 (358)
T ss_dssp -C--CCSEEEEESCGGGS--CHHHHHHHHHHHHHHTGGGGGGCEEEEE
T ss_pred -C--CceEEEEcccccCC--CHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 2 49999999999988 555667999999999999 9998885
No 237
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.35 E-value=6.2e-12 Score=104.74 Aligned_cols=110 Identities=14% Similarity=0.080 Sum_probs=80.6
Q ss_pred cCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCC
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (224)
.++.+|||+|||+|.++..++..+. .|+++|+|+.+++.|++++.. .++. ..+.++|+.+.... .
T Consensus 213 ~~g~~VLDlg~GtG~~sl~~a~~ga-~V~avDis~~al~~a~~n~~~--------ng~~--~~~~~~D~~~~l~~----~ 277 (393)
T 4dmg_A 213 RPGERVLDVYSYVGGFALRAARKGA-YALAVDKDLEALGVLDQAALR--------LGLR--VDIRHGEALPTLRG----L 277 (393)
T ss_dssp CTTCEEEEESCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHH--------HTCC--CEEEESCHHHHHHT----C
T ss_pred cCCCeEEEcccchhHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHHH--------hCCC--CcEEEccHHHHHHH----h
Confidence 4588999999999999999986654 599999999999999999862 2333 35668888764321 1
Q ss_pred CCCeeEEEEcccccc-----ccCCHHHHHHHHHHHHhhccCCeEEEEEeC
Q 027388 163 DAPFDICSCQFAMHY-----SWSTEARARRALANVSALLRPGGTFIGTMP 207 (224)
Q Consensus 163 ~~~~D~i~~~~~l~~-----~~~~~~~~~~~l~~~~~~lk~gG~li~~~~ 207 (224)
.+.||+|++...... +.....+...++..+.++|+|||.|++.+.
T Consensus 278 ~~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~ 327 (393)
T 4dmg_A 278 EGPFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSC 327 (393)
T ss_dssp CCCEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred cCCCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 234999998654211 001124667899999999999999996654
No 238
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.35 E-value=9.1e-12 Score=105.16 Aligned_cols=127 Identities=18% Similarity=0.183 Sum_probs=89.9
Q ss_pred HhhcCCCeEEEecCCCchhHHHHHhhcC-CeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccc
Q 027388 80 LYARRGDVVLDLACGKGGDLIKWDKAKI-GYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK 158 (224)
Q Consensus 80 ~~~~~~~~iLDiGcG~G~~~~~l~~~~~-~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 158 (224)
+...++.+|||+|||+|..+..++.... ..++++|+++.+++.+++++.. . +.++.++++|+...+..
T Consensus 242 l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~--------~--g~~~~~~~~D~~~~~~~- 310 (429)
T 1sqg_A 242 LAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKR--------L--GMKATVKQGDGRYPSQW- 310 (429)
T ss_dssp HCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHH--------T--TCCCEEEECCTTCTHHH-
T ss_pred cCCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHH--------c--CCCeEEEeCchhhchhh-
Confidence 3456788999999999999999887543 6999999999999999998762 1 22478899998776510
Q ss_pred ccCCCCCeeEEEEcc------ccccccC-----CH-------HHHHHHHHHHHhhccCCeEEEEEeC------ChHHHHH
Q 027388 159 VLADDAPFDICSCQF------AMHYSWS-----TE-------ARARRALANVSALLRPGGTFIGTMP------DANVIIK 214 (224)
Q Consensus 159 ~~~~~~~~D~i~~~~------~l~~~~~-----~~-------~~~~~~l~~~~~~lk~gG~li~~~~------~~~~~~~ 214 (224)
. ..+.||+|++.. ++.+..+ +. ..+..++..+.+.|||||+|++++. |...+..
T Consensus 311 -~-~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~ene~~v~~ 388 (429)
T 1sqg_A 311 -C-GEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKA 388 (429)
T ss_dssp -H-TTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGGGTHHHHHH
T ss_pred -c-ccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChhhHHHHHHH
Confidence 0 346899999632 2222100 00 1235889999999999999999864 3334555
Q ss_pred Hhhhc
Q 027388 215 KLREE 219 (224)
Q Consensus 215 ~~~~~ 219 (224)
.+.+.
T Consensus 389 ~l~~~ 393 (429)
T 1sqg_A 389 FLQRT 393 (429)
T ss_dssp HHHHC
T ss_pred HHHhC
Confidence 55543
No 239
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.34 E-value=8.1e-12 Score=102.20 Aligned_cols=112 Identities=21% Similarity=0.186 Sum_probs=87.5
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccC
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (224)
..++.+|||+|||+|.++.. +. ...+++++|+|+.+++.+++++.. .++..++.++++|+.+..
T Consensus 193 ~~~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~--------n~l~~~v~~~~~D~~~~~------ 256 (336)
T 2yx1_A 193 VSLNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKL--------NKLEHKIIPILSDVREVD------ 256 (336)
T ss_dssp CCTTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHH--------TTCTTTEEEEESCGGGCC------
T ss_pred cCCCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHH--------cCCCCcEEEEECChHHhc------
Confidence 35788999999999999999 76 677999999999999999999872 344456999999987653
Q ss_pred CCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeC--ChHHHHHHhhhc
Q 027388 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP--DANVIIKKLREE 219 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~--~~~~~~~~~~~~ 219 (224)
..||+|++..... ...++..+.++|+|||++++... ....+.+.+.+.
T Consensus 257 --~~fD~Vi~dpP~~--------~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~l~~~ 306 (336)
T 2yx1_A 257 --VKGNRVIMNLPKF--------AHKFIDKALDIVEEGGVIHYYTIGKDFDKAIKLFEKK 306 (336)
T ss_dssp --CCEEEEEECCTTT--------GGGGHHHHHHHEEEEEEEEEEEEESSSHHHHHHHHHH
T ss_pred --CCCcEEEECCcHh--------HHHHHHHHHHHcCCCCEEEEEEeecCchHHHHHHHHh
Confidence 6799999864321 12688899999999999887533 345566666655
No 240
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.34 E-value=5.5e-12 Score=106.68 Aligned_cols=128 Identities=17% Similarity=0.112 Sum_probs=91.6
Q ss_pred HhhcCCCeEEEecCCCchhHHHHHhh--cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccc
Q 027388 80 LYARRGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD 157 (224)
Q Consensus 80 ~~~~~~~~iLDiGcG~G~~~~~l~~~--~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 157 (224)
+...++.+|||+|||+|..+..++.. ..+.|+++|+|+.+++.+++++.. .++. ++.++++|+..+...
T Consensus 101 L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r--------~g~~-nv~v~~~Da~~l~~~ 171 (456)
T 3m4x_A 101 AAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIER--------WGVS-NAIVTNHAPAELVPH 171 (456)
T ss_dssp HCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHH--------HTCS-SEEEECCCHHHHHHH
T ss_pred cCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHH--------cCCC-ceEEEeCCHHHhhhh
Confidence 34567899999999999999998864 346899999999999999999862 2333 588999998776421
Q ss_pred cccCCCCCeeEEEEccc---cccccCCH---------------HHHHHHHHHHHhhccCCeEEEEEeC------ChHHHH
Q 027388 158 KVLADDAPFDICSCQFA---MHYSWSTE---------------ARARRALANVSALLRPGGTFIGTMP------DANVII 213 (224)
Q Consensus 158 ~~~~~~~~~D~i~~~~~---l~~~~~~~---------------~~~~~~l~~~~~~lk~gG~li~~~~------~~~~~~ 213 (224)
..+.||+|++.-. ...+-... ..+..++..+.++|||||+|+.+|. |...+.
T Consensus 172 ----~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~eEne~vv~ 247 (456)
T 3m4x_A 172 ----FSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPEENEEIIS 247 (456)
T ss_dssp ----HTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGGGTHHHHH
T ss_pred ----ccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccccCHHHHH
Confidence 2478999997431 11110000 1234789999999999999999765 444555
Q ss_pred HHhhhcc
Q 027388 214 KKLREEH 220 (224)
Q Consensus 214 ~~~~~~g 220 (224)
..+.+.+
T Consensus 248 ~~l~~~~ 254 (456)
T 3m4x_A 248 WLVENYP 254 (456)
T ss_dssp HHHHHSS
T ss_pred HHHHhCC
Confidence 5555544
No 241
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.34 E-value=1.9e-12 Score=100.60 Aligned_cols=103 Identities=17% Similarity=0.212 Sum_probs=81.9
Q ss_pred cCCCeEEEecCCCchhHHHHHhh-cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccC
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~-~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (224)
..+.+|||||||+|-++..+... ....|+++|+++.+++.++.++.. .+....+.+.|...-+
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~----------~g~~~~~~v~D~~~~~------ 194 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTR----------LNVPHRTNVADLLEDR------ 194 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHH----------TTCCEEEEECCTTTSC------
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHh----------cCCCceEEEeeecccC------
Confidence 55789999999999999988765 556899999999999999999862 2344788888876554
Q ss_pred CCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEE
Q 027388 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIG 204 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~ 204 (224)
+...||++++.-+++++ ........+ ++...|+++|+++-
T Consensus 195 p~~~~DvaL~lkti~~L--e~q~kg~g~-~ll~aL~~~~vvVS 234 (281)
T 3lcv_B 195 LDEPADVTLLLKTLPCL--ETQQRGSGW-EVIDIVNSPNIVVT 234 (281)
T ss_dssp CCSCCSEEEETTCHHHH--HHHSTTHHH-HHHHHSSCSEEEEE
T ss_pred CCCCcchHHHHHHHHHh--hhhhhHHHH-HHHHHhCCCCEEEe
Confidence 36899999999999998 112222344 99999999998874
No 242
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.33 E-value=7.1e-12 Score=106.16 Aligned_cols=114 Identities=18% Similarity=0.224 Sum_probs=84.4
Q ss_pred HhhcCCCeEEEecCCCchhHHHHHhh--cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccc
Q 027388 80 LYARRGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD 157 (224)
Q Consensus 80 ~~~~~~~~iLDiGcG~G~~~~~l~~~--~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 157 (224)
+...++.+|||+|||+|..+..++.. ..+.|+++|+|+.+++.+++++. ..++. +.++++|+.++...
T Consensus 97 L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~--------r~G~~--v~~~~~Da~~l~~~ 166 (464)
T 3m6w_A 97 LDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVE--------RWGAP--LAVTQAPPRALAEA 166 (464)
T ss_dssp HCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHH--------HHCCC--CEEECSCHHHHHHH
T ss_pred cCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH--------HcCCe--EEEEECCHHHhhhh
Confidence 34567899999999999999998865 34689999999999999999976 23333 88899998776421
Q ss_pred cccCCCCCeeEEEEcc------ccccc------cCC------HHHHHHHHHHHHhhccCCeEEEEEeC
Q 027388 158 KVLADDAPFDICSCQF------AMHYS------WST------EARARRALANVSALLRPGGTFIGTMP 207 (224)
Q Consensus 158 ~~~~~~~~~D~i~~~~------~l~~~------~~~------~~~~~~~l~~~~~~lk~gG~li~~~~ 207 (224)
..+.||+|++.- ++... ++. ...+..++..+.++|||||+|+++|.
T Consensus 167 ----~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTC 230 (464)
T 3m6w_A 167 ----FGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTC 230 (464)
T ss_dssp ----HCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEES
T ss_pred ----ccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 247899999631 11111 000 12247789999999999999999765
No 243
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.32 E-value=3.6e-12 Score=100.64 Aligned_cols=102 Identities=11% Similarity=-0.054 Sum_probs=78.6
Q ss_pred cCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCC
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (224)
..+++|||||||+|..+..+++.. .+++++|+++.+++.|++.+.... ......+++++.+|..+..
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~-----~~~~~~rv~~~~~D~~~~~------- 137 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFH-----EVKNNKNFTHAKQLLDLDI------- 137 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHH-----HHHTCTTEEEESSGGGSCC-------
T ss_pred CCCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhc-----cccCCCeEEEEechHHHHH-------
Confidence 456899999999999999888774 899999999999999998765200 0001346889999976542
Q ss_pred CCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeC
Q 027388 163 DAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (224)
Q Consensus 163 ~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~ 207 (224)
++||+|++... ++..+++.+.+.|+|||++++...
T Consensus 138 -~~fD~Ii~d~~---------dp~~~~~~~~~~L~pgG~lv~~~~ 172 (262)
T 2cmg_A 138 -KKYDLIFCLQE---------PDIHRIDGLKRMLKEDGVFISVAK 172 (262)
T ss_dssp -CCEEEEEESSC---------CCHHHHHHHHTTEEEEEEEEEEEE
T ss_pred -hhCCEEEECCC---------ChHHHHHHHHHhcCCCcEEEEEcC
Confidence 57999998731 122489999999999999998743
No 244
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.32 E-value=1.3e-11 Score=99.27 Aligned_cols=89 Identities=19% Similarity=0.377 Sum_probs=65.8
Q ss_pred HHHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccc
Q 027388 72 WIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDC 151 (224)
Q Consensus 72 ~~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~ 151 (224)
++..++..+...++.+|||||||+|.++..++.. ..+++|+|+++.+++.+++++.. .+. .+++++++|+
T Consensus 30 i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~-~~~v~~vDi~~~~~~~a~~~~~~--------~~~-~~v~~~~~D~ 99 (299)
T 2h1r_A 30 ILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL-AKKVITIDIDSRMISEVKKRCLY--------EGY-NNLEVYEGDA 99 (299)
T ss_dssp HHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT-SSEEEEECSCHHHHHHHHHHHHH--------TTC-CCEEC----C
T ss_pred HHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHH--------cCC-CceEEEECch
Confidence 3444555555667889999999999999998754 56999999999999999998741 122 4689999999
Q ss_pred cccccccccCCCCCeeEEEEcccccc
Q 027388 152 YEVHLDKVLADDAPFDICSCQFAMHY 177 (224)
Q Consensus 152 ~~~~~~~~~~~~~~~D~i~~~~~l~~ 177 (224)
.+++. ..||+|+++...++
T Consensus 100 ~~~~~-------~~~D~Vv~n~py~~ 118 (299)
T 2h1r_A 100 IKTVF-------PKFDVCTANIPYKI 118 (299)
T ss_dssp CSSCC-------CCCSEEEEECCGGG
T ss_pred hhCCc-------ccCCEEEEcCCccc
Confidence 87654 47999999876554
No 245
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.32 E-value=3.3e-11 Score=102.81 Aligned_cols=111 Identities=16% Similarity=0.133 Sum_probs=83.3
Q ss_pred CCCeEEEecCCCchhHHHHHhh--cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccC
Q 027388 84 RGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~~--~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (224)
++.+|||+|||+|..+..++.. ..+.|+++|+|+.+++.+++++.. .++. ++.++++|+..++..
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r--------~g~~-nv~~~~~D~~~~~~~---- 183 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISR--------CGIS-NVALTHFDGRVFGAA---- 183 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHH--------HTCC-SEEEECCCSTTHHHH----
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH--------cCCC-cEEEEeCCHHHhhhh----
Confidence 7889999999999999998875 346899999999999999999762 2332 589999998876421
Q ss_pred CCCCeeEEEEc------cccccccC-----CH-------HHHHHHHHHHHhhccCCeEEEEEeC
Q 027388 162 DDAPFDICSCQ------FAMHYSWS-----TE-------ARARRALANVSALLRPGGTFIGTMP 207 (224)
Q Consensus 162 ~~~~~D~i~~~------~~l~~~~~-----~~-------~~~~~~l~~~~~~lk~gG~li~~~~ 207 (224)
..+.||+|++. +++....+ +. ..+..++.++.++|||||+|++++.
T Consensus 184 ~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTc 247 (479)
T 2frx_A 184 VPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTC 247 (479)
T ss_dssp STTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred ccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecc
Confidence 24689999973 12211100 11 1245789999999999999999865
No 246
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.31 E-value=6.1e-11 Score=98.44 Aligned_cols=120 Identities=10% Similarity=0.006 Sum_probs=92.9
Q ss_pred HHHHhhcCCCeEEEecCCCchhHHHHHhhcC---------------------------------------CeEEEEeCCh
Q 027388 77 LVQLYARRGDVVLDLACGKGGDLIKWDKAKI---------------------------------------GYYVGIDIAE 117 (224)
Q Consensus 77 ~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~---------------------------------------~~~~gvD~s~ 117 (224)
+......++..+||.+||+|.+++..+.... ..++|+|+++
T Consensus 187 l~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~ 266 (384)
T 3ldg_A 187 ILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDG 266 (384)
T ss_dssp HHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCH
T ss_pred HHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCH
Confidence 3333456778999999999999988765321 3599999999
Q ss_pred hHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhcc
Q 027388 118 GSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLR 197 (224)
Q Consensus 118 ~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk 197 (224)
.+++.|++++. ..++...+.+.++|+.+++. ...||+|+++-.++.-+....+...+.+.+.+.|+
T Consensus 267 ~al~~Ar~Na~--------~~gl~~~I~~~~~D~~~l~~------~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk 332 (384)
T 3ldg_A 267 RMVEIARKNAR--------EVGLEDVVKLKQMRLQDFKT------NKINGVLISNPPYGERLLDDKAVDILYNEMGETFA 332 (384)
T ss_dssp HHHHHHHHHHH--------HTTCTTTEEEEECCGGGCCC------CCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHH--------HcCCCCceEEEECChHHCCc------cCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHh
Confidence 99999999987 34555679999999988764 45899999986654333455677788888888877
Q ss_pred C--CeEEEEEeCChH
Q 027388 198 P--GGTFIGTMPDAN 210 (224)
Q Consensus 198 ~--gG~li~~~~~~~ 210 (224)
+ ||.+++-+++..
T Consensus 333 ~~~g~~~~iit~~~~ 347 (384)
T 3ldg_A 333 PLKTWSQFILTNDTD 347 (384)
T ss_dssp TCTTSEEEEEESCTT
T ss_pred hCCCcEEEEEECCHH
Confidence 6 899888888765
No 247
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.30 E-value=1.7e-11 Score=101.89 Aligned_cols=120 Identities=17% Similarity=0.156 Sum_probs=90.5
Q ss_pred HHHHhhcCCCeEEEecCCCchhHHHHHhhcC---------------------------------------CeEEEEeCCh
Q 027388 77 LVQLYARRGDVVLDLACGKGGDLIKWDKAKI---------------------------------------GYYVGIDIAE 117 (224)
Q Consensus 77 ~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~---------------------------------------~~~~gvD~s~ 117 (224)
+......++.+|||++||+|.+++.++.... ..++|+|+++
T Consensus 188 l~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~ 267 (385)
T 3ldu_A 188 IYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDE 267 (385)
T ss_dssp HHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCH
T ss_pred HHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCH
Confidence 3333455678999999999999998765321 4699999999
Q ss_pred hHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhcc
Q 027388 118 GSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLR 197 (224)
Q Consensus 118 ~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk 197 (224)
.+++.|++++. ..++..++++.++|+.+++. ..+||+|+++-.+..-+....+...+.+.+.+.|+
T Consensus 268 ~ai~~Ar~Na~--------~~gl~~~i~~~~~D~~~l~~------~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk 333 (385)
T 3ldu_A 268 ESIDIARENAE--------IAGVDEYIEFNVGDATQFKS------EDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFR 333 (385)
T ss_dssp HHHHHHHHHHH--------HHTCGGGEEEEECCGGGCCC------SCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH--------HcCCCCceEEEECChhhcCc------CCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHh
Confidence 99999999986 33455569999999988764 46899999987654322233566777777877887
Q ss_pred C--CeEEEEEeCChH
Q 027388 198 P--GGTFIGTMPDAN 210 (224)
Q Consensus 198 ~--gG~li~~~~~~~ 210 (224)
+ ||.+++-+++..
T Consensus 334 ~~~g~~~~iit~~~~ 348 (385)
T 3ldu_A 334 KLKNWSYYLITSYED 348 (385)
T ss_dssp TSBSCEEEEEESCTT
T ss_pred hCCCCEEEEEECCHH
Confidence 6 888888887754
No 248
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.30 E-value=1.3e-11 Score=98.52 Aligned_cols=111 Identities=16% Similarity=0.128 Sum_probs=79.4
Q ss_pred hcCCCeEEEecCCC------chhHHHHHhh-c-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeE-Eecccc
Q 027388 82 ARRGDVVLDLACGK------GGDLIKWDKA-K-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARL-ICGDCY 152 (224)
Q Consensus 82 ~~~~~~iLDiGcG~------G~~~~~l~~~-~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~-~~~d~~ 152 (224)
..++.+|||+|||+ |. ..++.. . ..+|+|+|+|+. +. ++++ +++|+.
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~--------v~--------------~v~~~i~gD~~ 116 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF--------VS--------------DADSTLIGDCA 116 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC--------BC--------------SSSEEEESCGG
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC--------CC--------------CCEEEEECccc
Confidence 46788999999955 65 223332 2 468999999997 12 3788 999998
Q ss_pred ccccccccCCCCCeeEEEEccccccc-------cCCHHHHHHHHHHHHhhccCCeEEEEEe---CChHHHHHHhhhcccc
Q 027388 153 EVHLDKVLADDAPFDICSCQFAMHYS-------WSTEARARRALANVSALLRPGGTFIGTM---PDANVIIKKLREEHFC 222 (224)
Q Consensus 153 ~~~~~~~~~~~~~~D~i~~~~~l~~~-------~~~~~~~~~~l~~~~~~lk~gG~li~~~---~~~~~~~~~~~~~gf~ 222 (224)
+.+. .+.||+|+++...+.. .........+++.+.++|||||.|++.. .....+...+++.||.
T Consensus 117 ~~~~------~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~~l~~~GF~ 190 (290)
T 2xyq_A 117 TVHT------ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGHFSWW 190 (290)
T ss_dssp GCCC------SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTTEEEE
T ss_pred cCCc------cCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHHHHHHHHHHcCCc
Confidence 7654 3689999997542210 0112345689999999999999999865 3456788888888773
No 249
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.30 E-value=1.2e-11 Score=103.99 Aligned_cols=115 Identities=23% Similarity=0.260 Sum_probs=85.2
Q ss_pred cCCCeEEEecCCCchhHHHHHhh--cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccccc
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~--~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (224)
.++.+|||+|||+|.++..+++. ....++|+|+++.+++.| . ++.++++|+....
T Consensus 38 ~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----~--------------~~~~~~~D~~~~~----- 94 (421)
T 2ih2_A 38 PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----P--------------WAEGILADFLLWE----- 94 (421)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----T--------------TEEEEESCGGGCC-----
T ss_pred CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----C--------------CCcEEeCChhhcC-----
Confidence 45679999999999999988764 456899999999888766 1 3789999987654
Q ss_pred CCCCCeeEEEEccccccccC--------CHH-----------------HHHHHHHHHHhhccCCeEEEEEeCCh------
Q 027388 161 ADDAPFDICSCQFAMHYSWS--------TEA-----------------RARRALANVSALLRPGGTFIGTMPDA------ 209 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~~~--------~~~-----------------~~~~~l~~~~~~lk~gG~li~~~~~~------ 209 (224)
..+.||+|+++-....... ... ....++..+.++|+|||.+++.+|+.
T Consensus 95 -~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~ 173 (421)
T 2ih2_A 95 -PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLED 173 (421)
T ss_dssp -CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCGG
T ss_pred -ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCcc
Confidence 2478999999743321100 111 12367999999999999999988763
Q ss_pred -HHHHHHhhhccc
Q 027388 210 -NVIIKKLREEHF 221 (224)
Q Consensus 210 -~~~~~~~~~~gf 221 (224)
..+++.+.+.++
T Consensus 174 ~~~lr~~l~~~~~ 186 (421)
T 2ih2_A 174 FALLREFLAREGK 186 (421)
T ss_dssp GHHHHHHHHHHSE
T ss_pred HHHHHHHHHhcCC
Confidence 567777777664
No 250
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.29 E-value=3.3e-11 Score=100.46 Aligned_cols=120 Identities=10% Similarity=0.012 Sum_probs=88.4
Q ss_pred HHHHhhcCCCeEEEecCCCchhHHHHHhhcC---------------------------------------CeEEEEeCCh
Q 027388 77 LVQLYARRGDVVLDLACGKGGDLIKWDKAKI---------------------------------------GYYVGIDIAE 117 (224)
Q Consensus 77 ~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~---------------------------------------~~~~gvD~s~ 117 (224)
+......++..|||++||+|.+++.++.... ..++|+|+++
T Consensus 194 l~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~ 273 (393)
T 3k0b_A 194 VLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDA 273 (393)
T ss_dssp HHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCH
T ss_pred HHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCH
Confidence 3333456778999999999999988765321 3599999999
Q ss_pred hHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhcc
Q 027388 118 GSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLR 197 (224)
Q Consensus 118 ~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk 197 (224)
.+++.|++++. ..++...+.+.++|+.+++. ..+||+|+++-.+..-.....+...+.+.+.+.|+
T Consensus 274 ~al~~Ar~Na~--------~~gl~~~I~~~~~D~~~~~~------~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk 339 (393)
T 3k0b_A 274 RLIEIAKQNAV--------EAGLGDLITFRQLQVADFQT------EDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYK 339 (393)
T ss_dssp HHHHHHHHHHH--------HTTCTTCSEEEECCGGGCCC------CCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH--------HcCCCCceEEEECChHhCCC------CCCCCEEEECCCCccccCCchhHHHHHHHHHHHHh
Confidence 99999999987 34555568999999988764 46899999996543221122455666666766766
Q ss_pred C--CeEEEEEeCChH
Q 027388 198 P--GGTFIGTMPDAN 210 (224)
Q Consensus 198 ~--gG~li~~~~~~~ 210 (224)
+ ||.+++-+++..
T Consensus 340 ~~~g~~~~iit~~~~ 354 (393)
T 3k0b_A 340 RMPTWSVYVLTSYEL 354 (393)
T ss_dssp TCTTCEEEEEECCTT
T ss_pred cCCCCEEEEEECCHH
Confidence 5 888888887755
No 251
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.28 E-value=9.4e-11 Score=92.81 Aligned_cols=101 Identities=13% Similarity=0.116 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEec
Q 027388 70 NNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICG 149 (224)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~ 149 (224)
..++..++......++ +|||||||+|.++..++... .+|+++|+++.+++.+++++. ..+++++++
T Consensus 33 ~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~-~~V~avEid~~~~~~l~~~~~------------~~~v~vi~~ 98 (271)
T 3fut_A 33 EAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEAG-AEVTAIEKDLRLRPVLEETLS------------GLPVRLVFQ 98 (271)
T ss_dssp HHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTT-CCEEEEESCGGGHHHHHHHTT------------TSSEEEEES
T ss_pred HHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcC-CEEEEEECCHHHHHHHHHhcC------------CCCEEEEEC
Confidence 3456666776667778 99999999999999998654 699999999999999999876 346999999
Q ss_pred cccccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHH
Q 027388 150 DCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALAN 191 (224)
Q Consensus 150 d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~ 191 (224)
|+.+++... ...+|.|+++...+ + +.+-...++..
T Consensus 99 D~l~~~~~~----~~~~~~iv~NlPy~-i--ss~il~~ll~~ 133 (271)
T 3fut_A 99 DALLYPWEE----VPQGSLLVANLPYH-I--ATPLVTRLLKT 133 (271)
T ss_dssp CGGGSCGGG----SCTTEEEEEEECSS-C--CHHHHHHHHHH
T ss_pred ChhhCChhh----ccCccEEEecCccc-c--cHHHHHHHhcC
Confidence 999887631 13689988877654 3 44445555544
No 252
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.27 E-value=1.3e-10 Score=98.09 Aligned_cols=129 Identities=17% Similarity=0.140 Sum_probs=87.1
Q ss_pred HHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccc
Q 027388 73 IKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCY 152 (224)
Q Consensus 73 ~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~ 152 (224)
+..++..+...++.+|||+|||+|.++..++.. ..+++|+|+|+.+++.|++++.. .++. ++.++++|+.
T Consensus 275 ~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~~~--------~~~~-~v~f~~~d~~ 344 (433)
T 1uwv_A 275 VARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNARL--------NGLQ-NVTFYHENLE 344 (433)
T ss_dssp HHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHHHH--------TTCC-SEEEEECCTT
T ss_pred HHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHHHH--------cCCC-ceEEEECCHH
Confidence 333444444456789999999999999999865 67999999999999999998762 2333 6999999997
Q ss_pred ccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCChHHHH---HHhhhccc
Q 027388 153 EVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVII---KKLREEHF 221 (224)
Q Consensus 153 ~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~~~~~---~~~~~~gf 221 (224)
+... ......+.||+|+++-..... . .+++.+. .++|+++++++. ++..+. ..|.+.||
T Consensus 345 ~~l~-~~~~~~~~fD~Vv~dPPr~g~----~---~~~~~l~-~~~p~~ivyvsc-~p~tlard~~~l~~~Gy 406 (433)
T 1uwv_A 345 EDVT-KQPWAKNGFDKVLLDPARAGA----A---GVMQQII-KLEPIRIVYVSC-NPATLARDSEALLKAGY 406 (433)
T ss_dssp SCCS-SSGGGTTCCSEEEECCCTTCC----H---HHHHHHH-HHCCSEEEEEES-CHHHHHHHHHHHHHTTC
T ss_pred HHhh-hhhhhcCCCCEEEECCCCccH----H---HHHHHHH-hcCCCeEEEEEC-ChHHHHhhHHHHHHCCc
Confidence 6321 000134689999987543322 2 3444444 378888888765 444333 34445565
No 253
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.26 E-value=1.1e-11 Score=105.08 Aligned_cols=130 Identities=17% Similarity=0.204 Sum_probs=92.1
Q ss_pred CceehhhhHHHHHHHHHHHhhcCCCeEEEecCCCchhHHHHHhh--------------cCCeEEEEeCChhHHHHHHHhc
Q 027388 62 PIIHLKKLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKA--------------KIGYYVGIDIAEGSIEDCRTRY 127 (224)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~--------------~~~~~~gvD~s~~~~~~a~~~~ 127 (224)
.+++++.+...+ +..+...++.+|||+|||+|.++..++.. ....++|+|+++.+++.|+.++
T Consensus 152 ~fyTP~~v~~~m---v~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl 228 (445)
T 2okc_A 152 QYFTPRPLIQAM---VDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNL 228 (445)
T ss_dssp GGCCCHHHHHHH---HHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHH
T ss_pred cccCcHHHHHHH---HHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHH
Confidence 344555554433 33334456789999999999999887653 2357999999999999999886
Q ss_pred cCCcccccccccCCC-CeeEEeccccccccccccCCCCCeeEEEEccccccccCC-------------HHHHHHHHHHHH
Q 027388 128 NGDADHHQRRKKFSF-PARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWST-------------EARARRALANVS 193 (224)
Q Consensus 128 ~~~~~~~~~~~~~~~-~v~~~~~d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~-------------~~~~~~~l~~~~ 193 (224)
.. .++.. ++.+.++|....+. ...||+|+++..+...... ......++.++.
T Consensus 229 ~l--------~g~~~~~~~i~~gD~l~~~~------~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 294 (445)
T 2okc_A 229 YL--------HGIGTDRSPIVCEDSLEKEP------STLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMM 294 (445)
T ss_dssp HH--------TTCCSSCCSEEECCTTTSCC------SSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHH
T ss_pred HH--------hCCCcCCCCEeeCCCCCCcc------cCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHH
Confidence 51 23321 47789999876553 3589999998765543111 112357899999
Q ss_pred hhccCCeEEEEEeCC
Q 027388 194 ALLRPGGTFIGTMPD 208 (224)
Q Consensus 194 ~~lk~gG~li~~~~~ 208 (224)
+.|+|||++.+.+|+
T Consensus 295 ~~Lk~gG~~a~V~p~ 309 (445)
T 2okc_A 295 LMLKTGGRAAVVLPD 309 (445)
T ss_dssp HHEEEEEEEEEEEEH
T ss_pred HHhccCCEEEEEECC
Confidence 999999999888764
No 254
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.26 E-value=7.3e-11 Score=94.49 Aligned_cols=89 Identities=19% Similarity=0.214 Sum_probs=72.2
Q ss_pred HHHHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecc
Q 027388 71 NWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGD 150 (224)
Q Consensus 71 ~~~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d 150 (224)
.++..++..+...++.+|||||||+|.++..++.. ..+|++||+++.+++.+++++.. ..+++++++|
T Consensus 37 ~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~-~~~V~aVEid~~li~~a~~~~~~-----------~~~v~vi~gD 104 (295)
T 3gru_A 37 NFVNKAVESANLTKDDVVLEIGLGKGILTEELAKN-AKKVYVIEIDKSLEPYANKLKEL-----------YNNIEIIWGD 104 (295)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCGGGHHHHHHHHHH-----------CSSEEEEESC
T ss_pred HHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHhcc-----------CCCeEEEECc
Confidence 34555666666678899999999999999999865 56999999999999999988741 2369999999
Q ss_pred ccccccccccCCCCCeeEEEEccccc
Q 027388 151 CYEVHLDKVLADDAPFDICSCQFAMH 176 (224)
Q Consensus 151 ~~~~~~~~~~~~~~~~D~i~~~~~l~ 176 (224)
+.++++ +...||+|+++..++
T Consensus 105 ~l~~~~-----~~~~fD~Iv~NlPy~ 125 (295)
T 3gru_A 105 ALKVDL-----NKLDFNKVVANLPYQ 125 (295)
T ss_dssp TTTSCG-----GGSCCSEEEEECCGG
T ss_pred hhhCCc-----ccCCccEEEEeCccc
Confidence 998776 345799999887654
No 255
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.24 E-value=1.7e-10 Score=97.04 Aligned_cols=110 Identities=19% Similarity=0.161 Sum_probs=81.4
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccC
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (224)
..++.+|||+|||+|.++..++.. ..+++|+|+|+.+++.|++++. ..++. +.++++|+.++..
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~-~~~V~gvD~s~~ai~~A~~n~~--------~ngl~--v~~~~~d~~~~~~----- 351 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKR-GFNVKGFDSNEFAIEMARRNVE--------INNVD--AEFEVASDREVSV----- 351 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHH--------HHTCC--EEEEECCTTTCCC-----
T ss_pred cCCCCEEEEeeccchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHH--------HcCCc--EEEEECChHHcCc-----
Confidence 467889999999999999998754 5699999999999999999876 22333 8999999987642
Q ss_pred CCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCChHHHHHHhh
Q 027388 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVIIKKLR 217 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~~~~~~~~~ 217 (224)
..||+|++...-..+ ...++..+. .|+|+|+++++. |+..+.+.+.
T Consensus 352 --~~fD~Vv~dPPr~g~------~~~~~~~l~-~l~p~givyvsc-~p~tlarDl~ 397 (425)
T 2jjq_A 352 --KGFDTVIVDPPRAGL------HPRLVKRLN-REKPGVIVYVSC-NPETFARDVK 397 (425)
T ss_dssp --TTCSEEEECCCTTCS------CHHHHHHHH-HHCCSEEEEEES-CHHHHHHHHH
T ss_pred --cCCCEEEEcCCccch------HHHHHHHHH-hcCCCcEEEEEC-ChHHHHhHHh
Confidence 289999987543221 123444443 489999999876 5555555544
No 256
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.23 E-value=4.4e-11 Score=93.48 Aligned_cols=87 Identities=9% Similarity=0.179 Sum_probs=64.8
Q ss_pred HHHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccc
Q 027388 72 WIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDC 151 (224)
Q Consensus 72 ~~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~ 151 (224)
+...++..+...++.+|||||||+|.++..++... .+++++|+|+.+++.+++++.. ..+++++++|+
T Consensus 18 ~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~-----------~~~v~~~~~D~ 85 (244)
T 1qam_A 18 NIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC-NFVTAIEIDHKLCKTTENKLVD-----------HDNFQVLNKDI 85 (244)
T ss_dssp HHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHHHHHHHHTTT-----------CCSEEEECCCG
T ss_pred HHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC-CeEEEEECCHHHHHHHHHhhcc-----------CCCeEEEEChH
Confidence 34445544455678899999999999999988665 6999999999999999998751 23689999999
Q ss_pred cccccccccCCCCCeeEEEEcccc
Q 027388 152 YEVHLDKVLADDAPFDICSCQFAM 175 (224)
Q Consensus 152 ~~~~~~~~~~~~~~~D~i~~~~~l 175 (224)
.+++.. ....| .|+++...
T Consensus 86 ~~~~~~----~~~~~-~vv~nlPy 104 (244)
T 1qam_A 86 LQFKFP----KNQSY-KIFGNIPY 104 (244)
T ss_dssp GGCCCC----SSCCC-EEEEECCG
T ss_pred HhCCcc----cCCCe-EEEEeCCc
Confidence 887652 12345 45555443
No 257
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.20 E-value=1.5e-12 Score=101.94 Aligned_cols=112 Identities=14% Similarity=0.173 Sum_probs=79.1
Q ss_pred HHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccc
Q 027388 76 VLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH 155 (224)
Q Consensus 76 ~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 155 (224)
++..+...++.+|||||||+|.++..++... .+++|+|+|+.+++.+++++. ...+++++++|+.+++
T Consensus 21 i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~-~~v~~id~~~~~~~~a~~~~~-----------~~~~v~~~~~D~~~~~ 88 (245)
T 1yub_A 21 IIKQLNLKETDTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLFNLSSEKLK-----------LNTRVTLIHQDILQFQ 88 (245)
T ss_dssp HHHHCCCCSSEEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSSSSSSCTTT-----------TCSEEEECCSCCTTTT
T ss_pred HHHhcCCCCCCEEEEEeCCCCHHHHHHHHhC-CeEEEEECCHHHHHHHHHHhc-----------cCCceEEEECChhhcC
Confidence 4444455678899999999999999988665 799999999999998877654 1345899999998876
Q ss_pred cccccCCCCCeeEEEEccccccccCCHHHHHHHH--------------HHHHhhccCCeEEEEEeC
Q 027388 156 LDKVLADDAPFDICSCQFAMHYSWSTEARARRAL--------------ANVSALLRPGGTFIGTMP 207 (224)
Q Consensus 156 ~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l--------------~~~~~~lk~gG~li~~~~ 207 (224)
.. ..++| .|+++...+. +......++ +.+.++|+|||.+++.+.
T Consensus 89 ~~----~~~~f-~vv~n~Py~~---~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~~ 146 (245)
T 1yub_A 89 FP----NKQRY-KIVGNIPYHL---STQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLLH 146 (245)
T ss_dssp CC----CSSEE-EEEEECCSSS---CHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHTT
T ss_pred cc----cCCCc-EEEEeCCccc---cHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhhe
Confidence 51 13578 6666543321 222233332 558888999988776543
No 258
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.18 E-value=1.9e-10 Score=93.93 Aligned_cols=127 Identities=19% Similarity=0.222 Sum_probs=83.6
Q ss_pred CCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCC----CCeeEEeccccccccccc
Q 027388 84 RGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFS----FPARLICGDCYEVHLDKV 159 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~----~~v~~~~~d~~~~~~~~~ 159 (224)
.+++||+||||+|..+..+++....++++||+++.+++.|++.+..... ..+. .+++++.+|+.+......
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~-----~~l~dp~~~rv~vi~~Da~~~L~~~~ 262 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCG-----DVLDNLKGDCYQVLIEDCIPVLKRYA 262 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC---------CCSSSEETTEEEEESCHHHHHHHHH
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhcc-----ccccccCCCcEEEEECcHHHHHHhhh
Confidence 5789999999999999998876667899999999999999999762100 0011 268999999877542100
Q ss_pred cCCCCCeeEEEEcccc-ccccCCH-HHHHHHHHHH----HhhccCCeEEEEEeC--ChHHHHHHh
Q 027388 160 LADDAPFDICSCQFAM-HYSWSTE-ARARRALANV----SALLRPGGTFIGTMP--DANVIIKKL 216 (224)
Q Consensus 160 ~~~~~~~D~i~~~~~l-~~~~~~~-~~~~~~l~~~----~~~lk~gG~li~~~~--~~~~~~~~~ 216 (224)
...+.||+|++...- ..-..+. -....+++.+ .++|+|||++++... ....+...+
T Consensus 263 -~~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~~e~~~~~ 326 (364)
T 2qfm_A 263 -KEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLY 326 (364)
T ss_dssp -HHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHH
T ss_pred -ccCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHH
Confidence 014689999987532 1000010 0113455555 999999999998643 334444433
No 259
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.18 E-value=7.6e-10 Score=86.92 Aligned_cols=91 Identities=11% Similarity=0.183 Sum_probs=69.9
Q ss_pred HHHHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecc
Q 027388 71 NWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGD 150 (224)
Q Consensus 71 ~~~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d 150 (224)
.++..++......++.+|||||||+|.++..++... .+++++|+++.+++.+++++.. ..+++++++|
T Consensus 16 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~-~~V~avEid~~~~~~~~~~~~~-----------~~~v~~i~~D 83 (255)
T 3tqs_A 16 FVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTEC-DNLALVEIDRDLVAFLQKKYNQ-----------QKNITIYQND 83 (255)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTTS-SEEEEEECCHHHHHHHHHHHTT-----------CTTEEEEESC
T ss_pred HHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHhh-----------CCCcEEEEcc
Confidence 345556666667788999999999999999998654 6999999999999999998761 3469999999
Q ss_pred ccccccccccCCCCCeeEEEEcccc
Q 027388 151 CYEVHLDKVLADDAPFDICSCQFAM 175 (224)
Q Consensus 151 ~~~~~~~~~~~~~~~~D~i~~~~~l 175 (224)
+.++++.... ..++|| |+++...
T Consensus 84 ~~~~~~~~~~-~~~~~~-vv~NlPY 106 (255)
T 3tqs_A 84 ALQFDFSSVK-TDKPLR-VVGNLPY 106 (255)
T ss_dssp TTTCCGGGSC-CSSCEE-EEEECCH
T ss_pred hHhCCHHHhc-cCCCeE-EEecCCc
Confidence 9988764321 235788 5555443
No 260
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.12 E-value=2.6e-10 Score=94.65 Aligned_cols=120 Identities=15% Similarity=0.045 Sum_probs=88.8
Q ss_pred cCCCeEEEecCCCchhHHHHHhh--cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCC-eeEEecccccccc-cc
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFP-ARLICGDCYEVHL-DK 158 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~--~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~-v~~~~~d~~~~~~-~~ 158 (224)
.++.+|||++||+|.+++.++.. +..+++++|+++.+++.+++++.. .++..+ +.++++|+.++.. .
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~--------Ngl~~~~v~v~~~Da~~~l~~~- 121 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKL--------NNIPEDRYEIHGMEANFFLRKE- 121 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHH--------TTCCGGGEEEECSCHHHHHHSC-
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH--------hCCCCceEEEEeCCHHHHHHHh-
Confidence 46789999999999999998864 336899999999999999999873 344445 8999999876431 1
Q ss_pred ccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCChH-----HHHHHhhhcccc
Q 027388 159 VLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDAN-----VIIKKLREEHFC 222 (224)
Q Consensus 159 ~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~~-----~~~~~~~~~gf~ 222 (224)
....||+|++.- .. . ...++..+.+.|++||+|+++.-... .+...+++.|..
T Consensus 122 ---~~~~fD~V~lDP-~g----~---~~~~l~~a~~~Lk~gGll~~t~t~~~~l~g~~~~~~~rkYg~~ 179 (392)
T 3axs_A 122 ---WGFGFDYVDLDP-FG----T---PVPFIESVALSMKRGGILSLTATDTAPLSGTYPKTCMRRYMAR 179 (392)
T ss_dssp ---CSSCEEEEEECC-SS----C---CHHHHHHHHHHEEEEEEEEEEECCHHHHTTSSHHHHHHHHSSB
T ss_pred ---hCCCCcEEEECC-Cc----C---HHHHHHHHHHHhCCCCEEEEEecchhhhccccHHHHHHHhCCc
Confidence 145799999875 21 1 23588888999999999998865544 334455555543
No 261
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.09 E-value=1.7e-09 Score=89.67 Aligned_cols=111 Identities=14% Similarity=0.024 Sum_probs=80.4
Q ss_pred CCCeEEEecCCCchhHHHHHhh-cCCeEEEEeCChhHHHHHHHhccCCccccc-------ccccCCCCeeEEeccccccc
Q 027388 84 RGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQ-------RRKKFSFPARLICGDCYEVH 155 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~~-~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~-------~~~~~~~~v~~~~~d~~~~~ 155 (224)
++.+|||+|||+|..++.++.. ...+|+++|+++.+++.+++++..+..... ...++. ++.++++|+..+.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~-~i~v~~~Da~~~~ 125 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEK-TIVINHDDANRLM 125 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSS-EEEEEESCHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCC-ceEEEcCcHHHHH
Confidence 6889999999999999998876 446899999999999999999873200000 000232 2889999987653
Q ss_pred cccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeC
Q 027388 156 LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (224)
Q Consensus 156 ~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~ 207 (224)
.. ....||+|++.- .. . ...++..+.+.|++||+++++..
T Consensus 126 ~~----~~~~fD~I~lDP-~~----~---~~~~l~~a~~~lk~gG~l~vt~t 165 (378)
T 2dul_A 126 AE----RHRYFHFIDLDP-FG----S---PMEFLDTALRSAKRRGILGVTAT 165 (378)
T ss_dssp HH----STTCEEEEEECC-SS----C---CHHHHHHHHHHEEEEEEEEEEEC
T ss_pred Hh----ccCCCCEEEeCC-CC----C---HHHHHHHHHHhcCCCCEEEEEee
Confidence 21 135799999653 21 1 24678888999999999988754
No 262
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.09 E-value=5.9e-10 Score=96.55 Aligned_cols=145 Identities=17% Similarity=0.189 Sum_probs=97.4
Q ss_pred CCceehhhhHHHHHHHHHHHhhcCCCeEEEecCCCchhHHHHHhh----c---------------CCeEEEEeCChhHHH
Q 027388 61 SPIIHLKKLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKA----K---------------IGYYVGIDIAEGSIE 121 (224)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~----~---------------~~~~~gvD~s~~~~~ 121 (224)
..+++++.+..++ +..+.+.++.+|||.|||+|.++..++.. . ...++|+|+++.+++
T Consensus 149 G~fyTP~~iv~~m---v~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~ 225 (541)
T 2ar0_A 149 GQYFTPRPLIKTI---IHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRR 225 (541)
T ss_dssp -CCCCCHHHHHHH---HHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHH
T ss_pred CeeeCCHHHHHHH---HHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHH
Confidence 3455556554443 33334456789999999999999877642 1 237999999999999
Q ss_pred HHHHhccCCcccccccccCCC----CeeEEeccccccccccccCCCCCeeEEEEccccccccCC----------HHHHHH
Q 027388 122 DCRTRYNGDADHHQRRKKFSF----PARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWST----------EARARR 187 (224)
Q Consensus 122 ~a~~~~~~~~~~~~~~~~~~~----~v~~~~~d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~----------~~~~~~ 187 (224)
.|+.++.- .+... .+.+.++|....+.. ....||+|+++-.+...... ......
T Consensus 226 lA~~nl~l--------~gi~~~~~~~~~I~~gDtL~~~~~----~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~ 293 (541)
T 2ar0_A 226 LALMNCLL--------HDIEGNLDHGGAIRLGNTLGSDGE----NLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLC 293 (541)
T ss_dssp HHHHHHHT--------TTCCCBGGGTBSEEESCTTSHHHH----TSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHH
T ss_pred HHHHHHHH--------hCCCccccccCCeEeCCCcccccc----cccCCeEEEECCCcccccchhhHhhcCCCCCchHHH
Confidence 99988652 12221 267888987654321 34689999998655432110 122347
Q ss_pred HHHHHHhhccCCeEEEEEeCCh--------HHHHHHhhhcc
Q 027388 188 ALANVSALLRPGGTFIGTMPDA--------NVIIKKLREEH 220 (224)
Q Consensus 188 ~l~~~~~~lk~gG~li~~~~~~--------~~~~~~~~~~g 220 (224)
++..+.+.|+|||++.+.+|+. ..+++.|.+.+
T Consensus 294 Fl~~~l~~Lk~gGr~a~V~p~~~L~~~~~~~~iR~~L~~~~ 334 (541)
T 2ar0_A 294 FMQHIIETLHPGGRAAVVVPDNVLFEGGKGTDIRRDLMDKC 334 (541)
T ss_dssp HHHHHHHHEEEEEEEEEEEEHHHHHCCTHHHHHHHHHHHHE
T ss_pred HHHHHHHHhCCCCEEEEEecCcceecCcHHHHHHHHHhhcC
Confidence 8999999999999998887753 24566665544
No 263
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.09 E-value=1.2e-09 Score=90.47 Aligned_cols=112 Identities=11% Similarity=0.105 Sum_probs=80.0
Q ss_pred CCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCC--
Q 027388 85 GDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD-- 162 (224)
Q Consensus 85 ~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~-- 162 (224)
+.+|||+|||+|.++..++. ...+|+++|+|+.+++.|++++.. .++ .+++++++|+.+.... ....
T Consensus 214 ~~~vLDl~cG~G~~~l~la~-~~~~V~gvd~~~~ai~~a~~n~~~--------ng~-~~v~~~~~d~~~~~~~-~~~~~~ 282 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALAR-NFDRVLATEIAKPSVAAAQYNIAA--------NHI-DNVQIIRMAAEEFTQA-MNGVRE 282 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGG-GSSEEEEECCCHHHHHHHHHHHHH--------TTC-CSEEEECCCSHHHHHH-HSSCCC
T ss_pred CCEEEEccCCCCHHHHHHHh-cCCEEEEEECCHHHHHHHHHHHHH--------cCC-CceEEEECCHHHHHHH-Hhhccc
Confidence 57899999999999998875 556999999999999999999862 233 3689999998765311 0000
Q ss_pred ----------CCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCChHHHHHHhh
Q 027388 163 ----------DAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVIIKKLR 217 (224)
Q Consensus 163 ----------~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~~~~~~~~~ 217 (224)
...||+|++.-.-. .+...+.+.|+++|.+++...++..+.+.+.
T Consensus 283 ~~~l~~~~~~~~~fD~Vv~dPPr~----------g~~~~~~~~l~~~g~ivyvsc~p~t~ard~~ 337 (369)
T 3bt7_A 283 FNRLQGIDLKSYQCETIFVDPPRS----------GLDSETEKMVQAYPRILYISCNPETLCKNLE 337 (369)
T ss_dssp CTTGGGSCGGGCCEEEEEECCCTT----------CCCHHHHHHHTTSSEEEEEESCHHHHHHHHH
T ss_pred cccccccccccCCCCEEEECcCcc----------ccHHHHHHHHhCCCEEEEEECCHHHHHHHHH
Confidence 13799999764321 1223456666788888888888776665443
No 264
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=99.08 E-value=4.7e-10 Score=87.85 Aligned_cols=74 Identities=14% Similarity=0.172 Sum_probs=60.8
Q ss_pred HHHHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecc
Q 027388 71 NWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGD 150 (224)
Q Consensus 71 ~~~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d 150 (224)
.++..++......++.+|||||||+|.++..++..+..+++++|+++.+++.++++ . ..+++++++|
T Consensus 18 ~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~-~------------~~~v~~i~~D 84 (249)
T 3ftd_A 18 GVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI-G------------DERLEVINED 84 (249)
T ss_dssp HHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS-C------------CTTEEEECSC
T ss_pred HHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc-c------------CCCeEEEEcc
Confidence 34555666666677889999999999999999866457999999999999999876 3 3468999999
Q ss_pred ccccccc
Q 027388 151 CYEVHLD 157 (224)
Q Consensus 151 ~~~~~~~ 157 (224)
+.++++.
T Consensus 85 ~~~~~~~ 91 (249)
T 3ftd_A 85 ASKFPFC 91 (249)
T ss_dssp TTTCCGG
T ss_pred hhhCChh
Confidence 9988764
No 265
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.08 E-value=2.6e-09 Score=86.21 Aligned_cols=115 Identities=11% Similarity=0.014 Sum_probs=79.2
Q ss_pred hhcCCCeEEEecCCCchhHHHHHhh--cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccc
Q 027388 81 YARRGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK 158 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~G~~~~~l~~~--~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 158 (224)
.+.++.+|||+|||+|..+..++.. ..+.|+++|+++.+++.+++++.. .++ .++.++++|+.++....
T Consensus 99 ~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r--------~g~-~~v~~~~~D~~~~~~~~ 169 (309)
T 2b9e_A 99 DPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLAR--------AGV-SCCELAEEDFLAVSPSD 169 (309)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHH--------TTC-CSEEEEECCGGGSCTTC
T ss_pred CCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHH--------cCC-CeEEEEeCChHhcCccc
Confidence 4567889999999999999998864 457999999999999999999872 222 35899999987764310
Q ss_pred ccCCCCCeeEEEEcc------ccccccC----------CH----HHHHHHHHHHHhhccCCeEEEEEeC
Q 027388 159 VLADDAPFDICSCQF------AMHYSWS----------TE----ARARRALANVSALLRPGGTFIGTMP 207 (224)
Q Consensus 159 ~~~~~~~~D~i~~~~------~l~~~~~----------~~----~~~~~~l~~~~~~lk~gG~li~~~~ 207 (224)
. ....||.|++.- ++....+ .. ..+..+|..+.++++ ||+|+.+|.
T Consensus 170 ~--~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTC 235 (309)
T 2b9e_A 170 P--RYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTC 235 (309)
T ss_dssp G--GGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEES
T ss_pred c--ccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECC
Confidence 0 015799999731 2211000 00 112456777777776 999988754
No 266
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.03 E-value=2.5e-09 Score=95.26 Aligned_cols=124 Identities=14% Similarity=0.087 Sum_probs=87.1
Q ss_pred HHHHHhhcCCCeEEEecCCCchhHHHHHhhc-------------------------------------------CCeEEE
Q 027388 76 VLVQLYARRGDVVLDLACGKGGDLIKWDKAK-------------------------------------------IGYYVG 112 (224)
Q Consensus 76 ~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~-------------------------------------------~~~~~g 112 (224)
++......++..|||.+||+|.+++..+... ...++|
T Consensus 182 ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G 261 (703)
T 3v97_A 182 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYG 261 (703)
T ss_dssp HHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEE
T ss_pred HHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEE
Confidence 3333345577899999999999998876421 147999
Q ss_pred EeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCCCCCeeEEEEccccccccCCHHHHHHHHH--
Q 027388 113 IDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALA-- 190 (224)
Q Consensus 113 vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~-- 190 (224)
+|+++.+++.|+.++. ..++...+.+.++|+.++.... ..+.||+|+++-....-+....+...+.+
T Consensus 262 ~Did~~av~~A~~N~~--------~agv~~~i~~~~~D~~~~~~~~---~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l 330 (703)
T 3v97_A 262 SDSDARVIQRARTNAR--------LAGIGELITFEVKDVAQLTNPL---PKGPYGTVLSNPPYGERLDSEPALIALHSLL 330 (703)
T ss_dssp EESCHHHHHHHHHHHH--------HTTCGGGEEEEECCGGGCCCSC---TTCCCCEEEECCCCCC---CCHHHHHHHHHH
T ss_pred EECCHHHHHHHHHHHH--------HcCCCCceEEEECChhhCcccc---ccCCCCEEEeCCCccccccchhHHHHHHHHH
Confidence 9999999999999987 3455666899999998764310 12389999998654432223344444444
Q ss_pred -HHHhhccCCeEEEEEeCChH
Q 027388 191 -NVSALLRPGGTFIGTMPDAN 210 (224)
Q Consensus 191 -~~~~~lk~gG~li~~~~~~~ 210 (224)
++.+.+.|||.+++-+++..
T Consensus 331 ~~~lk~~~~g~~~~ilt~~~~ 351 (703)
T 3v97_A 331 GRIMKNQFGGWNLSLFSASPD 351 (703)
T ss_dssp HHHHHHHCTTCEEEEEESCHH
T ss_pred HHHHHhhCCCCeEEEEeCCHH
Confidence 44455568999999998865
No 267
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=99.02 E-value=9e-10 Score=96.20 Aligned_cols=102 Identities=14% Similarity=0.120 Sum_probs=75.0
Q ss_pred CCeEEEecCCCchhHHHHHhh---cCC--eEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccc
Q 027388 85 GDVVLDLACGKGGDLIKWDKA---KIG--YYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKV 159 (224)
Q Consensus 85 ~~~iLDiGcG~G~~~~~l~~~---~~~--~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 159 (224)
...|||+|||+|.+....+.. ... +|++||.|+ +...+++..+ .+++...|+++++|++++.+
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~--------~N~~~dkVtVI~gd~eev~L--- 425 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQ--------FEEWGSQVTVVSSDMREWVA--- 425 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHH--------HHTTGGGEEEEESCTTTCCC---
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHH--------hccCCCeEEEEeCcceeccC---
Confidence 357999999999885544432 322 689999997 6667777766 45677889999999999876
Q ss_pred cCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEE
Q 027388 160 LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFI 203 (224)
Q Consensus 160 ~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li 203 (224)
++++|+|++=+ +.+++..+-.+ .++....+.|||||+++
T Consensus 426 ---PEKVDIIVSEw-MG~fLl~E~ml-evL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 426 ---PEKADIIVSEL-LGSFADNELSP-ECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp ---SSCEEEEECCC-CBTTBGGGCHH-HHHHHHGGGEEEEEEEE
T ss_pred ---CcccCEEEEEc-CcccccccCCH-HHHHHHHHhcCCCcEEc
Confidence 57999999633 23333233333 67888899999999977
No 268
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.98 E-value=2e-09 Score=86.41 Aligned_cols=88 Identities=16% Similarity=0.080 Sum_probs=66.3
Q ss_pred HHHHHhhcCCCeEEEecCCCchhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccc
Q 027388 76 VLVQLYARRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV 154 (224)
Q Consensus 76 ~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~ 154 (224)
++..+...++.+|||+|||+|.++..++... ..+++|+|+|+.+++.|++++.. . +.++.++++|+.++
T Consensus 18 ~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~--------~--g~~v~~v~~d~~~l 87 (301)
T 1m6y_A 18 VIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKE--------F--SDRVSLFKVSYREA 87 (301)
T ss_dssp HHHHHCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGG--------G--TTTEEEEECCGGGH
T ss_pred HHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHh--------c--CCcEEEEECCHHHH
Confidence 4455556678899999999999999988764 56999999999999999999862 1 24699999998876
Q ss_pred ccccccCCCCCeeEEEEcc
Q 027388 155 HLDKVLADDAPFDICSCQF 173 (224)
Q Consensus 155 ~~~~~~~~~~~~D~i~~~~ 173 (224)
+..........||.|++..
T Consensus 88 ~~~l~~~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 88 DFLLKTLGIEKVDGILMDL 106 (301)
T ss_dssp HHHHHHTTCSCEEEEEEEC
T ss_pred HHHHHhcCCCCCCEEEEcC
Confidence 4200000125799999754
No 269
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.98 E-value=3e-09 Score=84.57 Aligned_cols=91 Identities=12% Similarity=0.150 Sum_probs=65.9
Q ss_pred HHHHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcC---CeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEE
Q 027388 71 NWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKI---GYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLI 147 (224)
Q Consensus 71 ~~~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~---~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~ 147 (224)
.++..++......++.+|||||||+|.++..++.... .+++++|+++.+++.++++. ..+++++
T Consensus 29 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-------------~~~v~~i 95 (279)
T 3uzu_A 29 GVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-------------GELLELH 95 (279)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-------------GGGEEEE
T ss_pred HHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-------------CCCcEEE
Confidence 3455566666667889999999999999999986543 23999999999999998873 1248999
Q ss_pred eccccccccccccCCC-CCeeEEEEccc
Q 027388 148 CGDCYEVHLDKVLADD-APFDICSCQFA 174 (224)
Q Consensus 148 ~~d~~~~~~~~~~~~~-~~~D~i~~~~~ 174 (224)
++|+.++++....... .....|+++..
T Consensus 96 ~~D~~~~~~~~~~~~~~~~~~~vv~NlP 123 (279)
T 3uzu_A 96 AGDALTFDFGSIARPGDEPSLRIIGNLP 123 (279)
T ss_dssp ESCGGGCCGGGGSCSSSSCCEEEEEECC
T ss_pred ECChhcCChhHhcccccCCceEEEEccC
Confidence 9999988764432111 02345665543
No 270
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.97 E-value=7.8e-09 Score=89.35 Aligned_cols=152 Identities=16% Similarity=0.154 Sum_probs=102.8
Q ss_pred cCCceehhhhHHHHHHHHHHHh-hcCCCeEEEecCCCchhHHHHHhh----cCCeEEEEeCChhHHHHHHHhccCCcccc
Q 027388 60 ASPIIHLKKLNNWIKSVLVQLY-ARRGDVVLDLACGKGGDLIKWDKA----KIGYYVGIDIAEGSIEDCRTRYNGDADHH 134 (224)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~iLDiGcG~G~~~~~l~~~----~~~~~~gvD~s~~~~~~a~~~~~~~~~~~ 134 (224)
...+++++.+...+..++.... ..++.+|||.+||+|.++..++.. ....++|+|+++.++..|+.++.
T Consensus 196 ~G~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~------ 269 (542)
T 3lkd_A 196 AGEFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMI------ 269 (542)
T ss_dssp CSSCCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHH------
T ss_pred CCeecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHH------
Confidence 4456677777666665544211 346789999999999999887654 24589999999999999998865
Q ss_pred cccccCC-CCeeEEeccccccccccccCCCCCeeEEEEccccccccCC-------------------HHHHHHHHHHHHh
Q 027388 135 QRRKKFS-FPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWST-------------------EARARRALANVSA 194 (224)
Q Consensus 135 ~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~-------------------~~~~~~~l~~~~~ 194 (224)
..++. .++.+.++|....+++. .....||+|+++-.+..-+.. ...-..++..+.+
T Consensus 270 --l~gi~~~~~~I~~gDtL~~d~p~--~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~ 345 (542)
T 3lkd_A 270 --LHGVPIENQFLHNADTLDEDWPT--QEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYY 345 (542)
T ss_dssp --HTTCCGGGEEEEESCTTTSCSCC--SSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHH
T ss_pred --HcCCCcCccceEecceecccccc--cccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHH
Confidence 22332 34788999987653211 135789999987533211100 0011358999999
Q ss_pred hcc-CCeEEEEEeCCh--------HHHHHHhhhccc
Q 027388 195 LLR-PGGTFIGTMPDA--------NVIIKKLREEHF 221 (224)
Q Consensus 195 ~lk-~gG~li~~~~~~--------~~~~~~~~~~gf 221 (224)
.|+ +||++.+.+|+. ..+++.+.+.+.
T Consensus 346 ~Lk~~gGr~a~VlP~g~Lf~~~~~~~iRk~Lle~~~ 381 (542)
T 3lkd_A 346 HLKQDNGVMAIVLPHGVLFRGNAEGTIRKALLEEGA 381 (542)
T ss_dssp TBCTTTCEEEEEEETHHHHCCTHHHHHHHHHHHTTC
T ss_pred HhCCCceeEEEEecchHhhCCchhHHHHHHHHhCCc
Confidence 999 999998887753 346666666554
No 271
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.96 E-value=2e-09 Score=93.20 Aligned_cols=145 Identities=17% Similarity=0.111 Sum_probs=95.8
Q ss_pred CCceehhhhHHHHHHHHHHHhhcCCCeEEEecCCCchhHHHHHhh--------c--------CCeEEEEeCChhHHHHHH
Q 027388 61 SPIIHLKKLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKA--------K--------IGYYVGIDIAEGSIEDCR 124 (224)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~--------~--------~~~~~gvD~s~~~~~~a~ 124 (224)
..+++++.+..++..++ .+.+ .+|||.+||+|.++..++.. . ...++|+|+++.++..|+
T Consensus 225 G~fyTP~~Vv~lmv~ll---~p~~-~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~ 300 (544)
T 3khk_A 225 GQYYTPKSIVTLIVEML---EPYK-GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAA 300 (544)
T ss_dssp TTTCCCHHHHHHHHHHH---CCCS-EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHH
T ss_pred CeEeCCHHHHHHHHHHH---hcCC-CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHH
Confidence 45566676655554443 2333 49999999999998876431 0 347999999999999999
Q ss_pred HhccCCcccccccccCCCCeeEEeccccccccccccCCCCCeeEEEEcccccc-------------------------cc
Q 027388 125 TRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHY-------------------------SW 179 (224)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~D~i~~~~~l~~-------------------------~~ 179 (224)
.++. ..++..++.+.++|....+.. ....||+|+++-.+.. +.
T Consensus 301 ~Nl~--------l~gi~~~i~i~~gDtL~~~~~----~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~ 368 (544)
T 3khk_A 301 MNMV--------IRGIDFNFGKKNADSFLDDQH----PDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTP 368 (544)
T ss_dssp HHHH--------HTTCCCBCCSSSCCTTTSCSC----TTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCC
T ss_pred HHHH--------HhCCCcccceeccchhcCccc----ccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccC
Confidence 8875 223333444577776544321 3578999999754432 10
Q ss_pred CCHHHHHHHHHHHHhhccCCeEEEEEeCCh---------HHHHHHhhhccc
Q 027388 180 STEARARRALANVSALLRPGGTFIGTMPDA---------NVIIKKLREEHF 221 (224)
Q Consensus 180 ~~~~~~~~~l~~~~~~lk~gG~li~~~~~~---------~~~~~~~~~~gf 221 (224)
.....-..++..+.+.|++||++.+.+|+. ..+++.+.+.+.
T Consensus 369 ~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g~L~~~~~~~~~iRk~Lle~~~ 419 (544)
T 3khk_A 369 PTGNANFAWMLHMLYHLAPTGSMALLLANGSMSSNTNNEGEIRKTLVEQDL 419 (544)
T ss_dssp CTTCTHHHHHHHHHHTEEEEEEEEEEEETHHHHCCGGGHHHHHHHHHHTTC
T ss_pred CCcchhHHHHHHHHHHhccCceEEEEecchhhhcCcchHHHHHHHHHhCCc
Confidence 011112368999999999999988887752 356666666554
No 272
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.95 E-value=4.3e-09 Score=82.27 Aligned_cols=115 Identities=18% Similarity=0.236 Sum_probs=72.9
Q ss_pred HHHHHhhcCCCeEEEecCCCchhHHHHHhh-cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccc
Q 027388 76 VLVQLYARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV 154 (224)
Q Consensus 76 ~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~-~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~ 154 (224)
+.+.....++.+|||||||+|.++..++.. ....+.++|++.++... ... ....+.++..+..++...
T Consensus 66 i~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~---pi~--------~~~~g~~ii~~~~~~dv~ 134 (277)
T 3evf_A 66 FHERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEK---PMN--------VQSLGWNIITFKDKTDIH 134 (277)
T ss_dssp HHHTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCC---CCC--------CCBTTGGGEEEECSCCTT
T ss_pred HHHhCCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccc---ccc--------cCcCCCCeEEEeccceeh
Confidence 333334567789999999999999987654 44567888888543110 000 001122355556665333
Q ss_pred ccccccCCCCCeeEEEEccccc----cccCCHHHHHHHHHHHHhhccCC-eEEEEEeCC
Q 027388 155 HLDKVLADDAPFDICSCQFAMH----YSWSTEARARRALANVSALLRPG-GTFIGTMPD 208 (224)
Q Consensus 155 ~~~~~~~~~~~~D~i~~~~~l~----~~~~~~~~~~~~l~~~~~~lk~g-G~li~~~~~ 208 (224)
.+ ....||+|+|..+.+ ++ .......++..+.++|+|| |.|++....
T Consensus 135 ~l-----~~~~~DlVlsD~apnsG~~~~--D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 135 RL-----EPVKCDTLLCDIGESSSSSVT--EGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp TS-----CCCCCSEEEECCCCCCSCHHH--HHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred hc-----CCCCccEEEecCccCcCchHH--HHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 33 467899999988665 22 1111123478889999999 999999777
No 273
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.95 E-value=1.6e-09 Score=85.18 Aligned_cols=113 Identities=12% Similarity=0.002 Sum_probs=75.6
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCCh-------hHHHHHHHhccCCcccccccccCCCCeeEEecccccc
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAE-------GSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV 154 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~-------~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~ 154 (224)
..++.+|||+|||+|.++..++.. ..+|+++|+|+ .+++.|+++.. ..++..+++++++|+.++
T Consensus 81 ~~~~~~VLDlgcG~G~~a~~lA~~-g~~V~~vD~s~~~~~ll~~~l~~a~~n~~--------~~~~~~ri~~~~~d~~~~ 151 (258)
T 2r6z_A 81 HTAHPTVWDATAGLGRDSFVLASL-GLTVTAFEQHPAVACLLSDGIRRALLNPE--------TQDTAARINLHFGNAAEQ 151 (258)
T ss_dssp GGGCCCEEETTCTTCHHHHHHHHT-TCCEEEEECCHHHHHHHHHHHHHHHHSHH--------HHHHHTTEEEEESCHHHH
T ss_pred cCCcCeEEEeeCccCHHHHHHHHh-CCEEEEEECChhhhHHHHHHHHHHHhHHH--------hhCCccCeEEEECCHHHH
Confidence 356789999999999999998865 56899999999 99999987754 223334599999998764
Q ss_pred ccccccCCC--CCeeEEEEccccccccC----------------CHHHHHHHHHHHHhhccCCeEEEEEeCC
Q 027388 155 HLDKVLADD--APFDICSCQFAMHYSWS----------------TEARARRALANVSALLRPGGTFIGTMPD 208 (224)
Q Consensus 155 ~~~~~~~~~--~~~D~i~~~~~l~~~~~----------------~~~~~~~~l~~~~~~lk~gG~li~~~~~ 208 (224)
... . +. ++||+|++...+.+... ...+...++..+.++.+. .+++..|.
T Consensus 152 l~~-~--~~~~~~fD~V~~dP~~~~~~~sa~vkk~~~~l~~l~~~~~d~~~ll~~a~~~~~~--~vvvk~p~ 218 (258)
T 2r6z_A 152 MPA-L--VKTQGKPDIVYLDPMYPERRKSAAVKKEMAYFHRLVGEAQDEVVLLHTARQTAKK--RVVVKRPR 218 (258)
T ss_dssp HHH-H--HHHHCCCSEEEECCCC-------------HHHHHHHSHHHHHHHHHHHHHHHCSS--EEEEEEET
T ss_pred HHh-h--hccCCCccEEEECCCCCCcccchHHHHHHHHhhhhcCCCccHHHHHHHHHHhcCc--EEEEEcCC
Confidence 210 0 12 68999999765543210 112345566666666643 45555444
No 274
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.91 E-value=2.1e-09 Score=84.30 Aligned_cols=90 Identities=8% Similarity=0.012 Sum_probs=64.5
Q ss_pred HHHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCe--EEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEec
Q 027388 72 WIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGY--YVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICG 149 (224)
Q Consensus 72 ~~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~--~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~ 149 (224)
++..++..+...++.+|||||||+|.++. +. .. .+ ++++|+++.|++.+++++.. ..+++++++
T Consensus 9 i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~-~~-~~~~v~avEid~~~~~~a~~~~~~-----------~~~v~~i~~ 74 (252)
T 1qyr_A 9 VIDSIVSAINPQKGQAMVEIGPGLAALTE-PV-GE-RLDQLTVIELDRDLAARLQTHPFL-----------GPKLTIYQQ 74 (252)
T ss_dssp HHHHHHHHHCCCTTCCEEEECCTTTTTHH-HH-HT-TCSCEEEECCCHHHHHHHHTCTTT-----------GGGEEEECS
T ss_pred HHHHHHHhcCCCCcCEEEEECCCCcHHHH-hh-hC-CCCeEEEEECCHHHHHHHHHHhcc-----------CCceEEEEC
Confidence 34555666666778899999999999999 64 33 56 99999999999999988651 136999999
Q ss_pred cccccccccccCCCCCeeEEEEcccc
Q 027388 150 DCYEVHLDKVLADDAPFDICSCQFAM 175 (224)
Q Consensus 150 d~~~~~~~~~~~~~~~~D~i~~~~~l 175 (224)
|+.++++.......+..+.|+++...
T Consensus 75 D~~~~~~~~~~~~~~~~~~vvsNlPY 100 (252)
T 1qyr_A 75 DAMTFNFGELAEKMGQPLRVFGNLPY 100 (252)
T ss_dssp CGGGCCHHHHHHHHTSCEEEEEECCT
T ss_pred chhhCCHHHhhcccCCceEEEECCCC
Confidence 99887653210001234677776553
No 275
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.85 E-value=3.3e-08 Score=74.50 Aligned_cols=104 Identities=8% Similarity=-0.008 Sum_probs=73.3
Q ss_pred cCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccC--CCCeeEEeccccccc-----
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKF--SFPARLICGDCYEVH----- 155 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~--~~~v~~~~~d~~~~~----- 155 (224)
.+.++|||+||| .-+..+++...++++.+|.++...+.|++.+. ..++ ..++.++.+|+.+..
T Consensus 29 ~~a~~VLEiGtG--ySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~--------~~g~~~~~~I~~~~gda~~~~~wg~p 98 (202)
T 3cvo_A 29 EEAEVILEYGSG--GSTVVAAELPGKHVTSVESDRAWARMMKAWLA--------ANPPAEGTEVNIVWTDIGPTGDWGHP 98 (202)
T ss_dssp HHCSEEEEESCS--HHHHHHHTSTTCEEEEEESCHHHHHHHHHHHH--------HSCCCTTCEEEEEECCCSSBCGGGCB
T ss_pred hCCCEEEEECch--HHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHH--------HcCCCCCCceEEEEeCchhhhccccc
Confidence 467899999985 34444444325799999999999999999987 3344 557999999976431
Q ss_pred --------ccc----c--cCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 156 --------LDK----V--LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 156 --------~~~----~--~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
+.. . ....++||+|+..... ....+..+.+.|+|||++++.
T Consensus 99 ~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k---------~~~~~~~~l~~l~~GG~Iv~D 153 (202)
T 3cvo_A 99 VSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRF---------RVGCALATAFSITRPVTLLFD 153 (202)
T ss_dssp SSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSS---------HHHHHHHHHHHCSSCEEEEET
T ss_pred ccchhhhhHHHHhhhhhccccCCCCCEEEEeCCC---------chhHHHHHHHhcCCCeEEEEe
Confidence 000 0 0023789999987642 124556677999999999875
No 276
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.84 E-value=8.8e-08 Score=85.19 Aligned_cols=140 Identities=15% Similarity=0.061 Sum_probs=88.2
Q ss_pred CCceehhhhHHHHHHHHHHHh---hcCCCeEEEecCCCchhHHHHHhhc----CCeEEEEeCChhHHHHH--HHhccCCc
Q 027388 61 SPIIHLKKLNNWIKSVLVQLY---ARRGDVVLDLACGKGGDLIKWDKAK----IGYYVGIDIAEGSIEDC--RTRYNGDA 131 (224)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~iLDiGcG~G~~~~~l~~~~----~~~~~gvD~s~~~~~~a--~~~~~~~~ 131 (224)
..++.+..+..++..+..... ..++.+|||.|||+|.++..++... ...++|+|+++.+++.| +.++..++
T Consensus 295 GqFYTP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~ 374 (878)
T 3s1s_A 295 GVVPTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQ 374 (878)
T ss_dssp BSSSCCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTT
T ss_pred ceEcCCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhh
Confidence 345566676666655532221 2357899999999999999887543 34799999999999999 54443211
Q ss_pred ccccccccCCCCeeEEeccccccccccccCCCCCeeEEEEccccccccCCHH-------------------------HHH
Q 027388 132 DHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEA-------------------------RAR 186 (224)
Q Consensus 132 ~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~-------------------------~~~ 186 (224)
.. .+.. ...+...|+...... ....||+|+++-.+........ ...
T Consensus 375 Ll----hGi~-~~~I~~dD~L~~~~~----~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~ 445 (878)
T 3s1s_A 375 LV----SSNN-APTITGEDVCSLNPE----DFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEA 445 (878)
T ss_dssp TC----BTTB-CCEEECCCGGGCCGG----GGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHH
T ss_pred hh----cCCC-cceEEecchhccccc----ccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHH
Confidence 11 1111 124445555442211 2478999999865522111111 134
Q ss_pred HHHHHHHhhccCCeEEEEEeCCh
Q 027388 187 RALANVSALLRPGGTFIGTMPDA 209 (224)
Q Consensus 187 ~~l~~~~~~lk~gG~li~~~~~~ 209 (224)
.++..+.+.|++||++.+.+|+.
T Consensus 446 aFIe~Al~lLKpGGrLAfIlP~s 468 (878)
T 3s1s_A 446 LFLELVTELVQDGTVISAIMPKQ 468 (878)
T ss_dssp HHHHHHHHHSCTTCEEEEEEETH
T ss_pred HHHHHHHHhcCCCcEEEEEEChH
Confidence 57888999999999999988863
No 277
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.83 E-value=9e-09 Score=90.12 Aligned_cols=108 Identities=16% Similarity=0.031 Sum_probs=73.4
Q ss_pred CCeEEEecCCCchhHHHHHhh----c----------CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecc
Q 027388 85 GDVVLDLACGKGGDLIKWDKA----K----------IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGD 150 (224)
Q Consensus 85 ~~~iLDiGcG~G~~~~~l~~~----~----------~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d 150 (224)
.+.|||||||+|.+....+.. + ..+|++||.++.++..++.+.. .++...|+++.+|
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~---------Ng~~d~VtVI~gd 480 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV---------RTWKRRVTIIESD 480 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH---------HTTTTCSEEEESC
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh---------cCCCCeEEEEeCc
Confidence 458999999999986533221 1 2389999999977766555543 3667779999999
Q ss_pred ccccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEE
Q 027388 151 CYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFI 203 (224)
Q Consensus 151 ~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li 203 (224)
++++.+.......+++|+|++=+. .++.+.+ -....|..+.+.|||||+++
T Consensus 481 ~eev~lp~~~~~~ekVDIIVSElm-Gsfl~nE-L~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 481 MRSLPGIAKDRGFEQPDIIVSELL-GSFGDNE-LSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp GGGHHHHHHHTTCCCCSEEEECCC-BTTBGGG-SHHHHHHTTGGGSCTTCEEE
T ss_pred hhhcccccccCCCCcccEEEEecc-ccccchh-ccHHHHHHHHHhCCCCcEEE
Confidence 998865100002579999997443 3332222 23446677789999999877
No 278
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.82 E-value=3e-08 Score=78.89 Aligned_cols=117 Identities=15% Similarity=0.180 Sum_probs=83.9
Q ss_pred hcCCCeEEEecCCCchhHHHHHhh-cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccccc
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~-~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (224)
...+++||=||.|.|..+..+++. ...+++.||+++..++.+++.+..... ...-+.+++++.+|...+-..
T Consensus 81 ~p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~----~~~~dpRv~v~~~Dg~~~l~~--- 153 (294)
T 3o4f_A 81 HGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNA----GSYDDPRFKLVIDDGVNFVNQ--- 153 (294)
T ss_dssp SSCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHT----TGGGCTTEEEEESCTTTTTSC---
T ss_pred CCCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccc----cccCCCcEEEEechHHHHHhh---
Confidence 356789999999999999998875 456899999999999999998741100 001246799999998876532
Q ss_pred CCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEe
Q 027388 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~ 206 (224)
..+.||+|+....=..-....-.-..+++.+++.|+|||+++...
T Consensus 154 -~~~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 154 -TSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp -SSCCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEE
T ss_pred -ccccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEec
Confidence 457899999764211000000012468999999999999999863
No 279
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.82 E-value=3.4e-08 Score=81.37 Aligned_cols=137 Identities=12% Similarity=0.063 Sum_probs=85.0
Q ss_pred hHHHHHHHHHHHhhc-----CCCeEEEecCCCchhHHHHHh--------h--------cCCeEEEEeCChhHHHHHHHhc
Q 027388 69 LNNWIKSVLVQLYAR-----RGDVVLDLACGKGGDLIKWDK--------A--------KIGYYVGIDIAEGSIEDCRTRY 127 (224)
Q Consensus 69 ~~~~~~~~~~~~~~~-----~~~~iLDiGcG~G~~~~~l~~--------~--------~~~~~~gvD~s~~~~~~a~~~~ 127 (224)
...+++..+..+... ...+|+|+|||+|.++..+.. . ..-.++..|+........-+.+
T Consensus 32 ~~~~~~~ai~~l~~~~~~~~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L 111 (374)
T 3b5i_A 32 MLHLLEETLENVHLNSSASPPPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLL 111 (374)
T ss_dssp HHHHHHHHHHTSCCCCSSSCCCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHS
T ss_pred HHHHHHHHHHHhhccccCCCCceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhh
Confidence 344555555544333 257899999999998887632 1 1236889999998888877777
Q ss_pred cCCcccc---cccccCCCCeeEEeccccccccccccCCCCCeeEEEEccccccccCCH----------------------
Q 027388 128 NGDADHH---QRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTE---------------------- 182 (224)
Q Consensus 128 ~~~~~~~---~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~---------------------- 182 (224)
......- ........+..|+.+....+-. ..++.+++|+|+++.++||+...+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~f~~gvpgSFy~--rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~ 189 (374)
T 3b5i_A 112 PPLVSNTCMEECLAADGNRSYFVAGVPGSFYR--RLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAG 189 (374)
T ss_dssp CCBCCCC--CCC---CCCBCSEEEEEESCTTS--CCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCC
T ss_pred hhhhhhcchhhhccccCCCceEEEecChhhhc--ccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCC
Confidence 6321000 0000011112233333222110 112689999999999999983211
Q ss_pred ------------HHHHHHHHHHHhhccCCeEEEEEeC
Q 027388 183 ------------ARARRALANVSALLRPGGTFIGTMP 207 (224)
Q Consensus 183 ------------~~~~~~l~~~~~~lk~gG~li~~~~ 207 (224)
.|...+|+...+.|+|||.+++++.
T Consensus 190 ~~v~~ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~~~ 226 (374)
T 3b5i_A 190 EKTTTAYKRQFQADLAEFLRARAAEVKRGGAMFLVCL 226 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEe
Confidence 2677789999999999999998754
No 280
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.80 E-value=7.6e-09 Score=81.00 Aligned_cols=110 Identities=18% Similarity=0.235 Sum_probs=70.4
Q ss_pred hhcCCCeEEEecCCCchhHHHHHhh-cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccc
Q 027388 81 YARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKV 159 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~G~~~~~l~~~-~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 159 (224)
.+.++.+|||||||+|.|+..++.. ....++|+|++..+...+... .....++..+..++.-..+
T Consensus 87 ~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-----------~~~g~~ii~~~~~~dv~~l--- 152 (282)
T 3gcz_A 87 YVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-----------TTLGWNLIRFKDKTDVFNM--- 152 (282)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-----------CBTTGGGEEEECSCCGGGS---
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-----------ccCCCceEEeeCCcchhhc---
Confidence 4567789999999999999987743 455788999987642222110 0112233344433322222
Q ss_pred cCCCCCeeEEEEccccc----cccCCHHHHHHHHHHHHhhccCC--eEEEEEeCC
Q 027388 160 LADDAPFDICSCQFAMH----YSWSTEARARRALANVSALLRPG--GTFIGTMPD 208 (224)
Q Consensus 160 ~~~~~~~D~i~~~~~l~----~~~~~~~~~~~~l~~~~~~lk~g--G~li~~~~~ 208 (224)
....+|+|+|..+.. .+ .......++.-+.++|+|| |.|++....
T Consensus 153 --~~~~~DvVLSDmApnsG~~~~--D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 153 --EVIPGDTLLCDIGESSPSIAV--EEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp --CCCCCSEEEECCCCCCSCHHH--HHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred --CCCCcCEEEecCccCCCChHH--HHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 467899999998766 11 1111123577778899999 999998777
No 281
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.72 E-value=3e-08 Score=77.83 Aligned_cols=135 Identities=16% Similarity=0.107 Sum_probs=81.3
Q ss_pred cCCCeEEEecCCCchhHHHHHhh-------cC------CeEEEEeCCh---hHHH-----------HHHHhccCCc----
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKA-------KI------GYYVGIDIAE---GSIE-----------DCRTRYNGDA---- 131 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~-------~~------~~~~gvD~s~---~~~~-----------~a~~~~~~~~---- 131 (224)
.++.+|||||+|+|..+..++.. .. ..++++|..+ ..+. .+++.+..-.
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 35578999999999988775542 22 3799999776 4444 3333322100
Q ss_pred cccc-ccccCCCCeeEEeccccccccccccCCCCCeeEEEEcc-ccccccCCHHH--HHHHHHHHHhhccCCeEEEEEeC
Q 027388 132 DHHQ-RRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQF-AMHYSWSTEAR--ARRALANVSALLRPGGTFIGTMP 207 (224)
Q Consensus 132 ~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~D~i~~~~-~l~~~~~~~~~--~~~~l~~~~~~lk~gG~li~~~~ 207 (224)
..+. .-.....+++++.+|+.+............||+|+... +.... ++ ...++..+.++|+|||+|+..+.
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~----p~lw~~~~l~~l~~~L~pGG~l~tysa 214 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKN----PDMWTQNLFNAMARLARPGGTLATFTS 214 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTC----GGGCCHHHHHHHHHHEEEEEEEEESCC
T ss_pred chhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccC----hhhcCHHHHHHHHHHcCCCcEEEEEeC
Confidence 0000 00011235788999987632110000013799999864 21111 12 35799999999999999885443
Q ss_pred ChHHHHHHhhhcccc
Q 027388 208 DANVIIKKLREEHFC 222 (224)
Q Consensus 208 ~~~~~~~~~~~~gf~ 222 (224)
...+++.+.++||.
T Consensus 215 -a~~vrr~L~~aGF~ 228 (257)
T 2qy6_A 215 -AGFVRRGLQEAGFT 228 (257)
T ss_dssp -BHHHHHHHHHHTEE
T ss_pred -CHHHHHHHHHCCCE
Confidence 35788899999985
No 282
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.72 E-value=1.8e-07 Score=77.24 Aligned_cols=121 Identities=12% Similarity=0.019 Sum_probs=70.3
Q ss_pred CCeEEEecCCCchhHHHHHhh------------------cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeE
Q 027388 85 GDVVLDLACGKGGDLIKWDKA------------------KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARL 146 (224)
Q Consensus 85 ~~~iLDiGcG~G~~~~~l~~~------------------~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~ 146 (224)
..+|+|+||++|.++..+... ..-.++..|+...-....-+.+......-.+..+-..+..|
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 578999999999988876542 11257788987332222222211000000000000112355
Q ss_pred EeccccccccccccCCCCCeeEEEEccccccccCCH-----------------------------------HHHHHHHHH
Q 027388 147 ICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTE-----------------------------------ARARRALAN 191 (224)
Q Consensus 147 ~~~d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~-----------------------------------~~~~~~l~~ 191 (224)
+.+....+= ...++.+++|+|+++.++||+...+ .|...+|+.
T Consensus 133 ~~gvpgSFy--~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~ 210 (384)
T 2efj_A 133 IGAMPGSFY--SRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRI 210 (384)
T ss_dssp EEECCSCTT--SCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhh--hccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 555433321 1112689999999999999973321 133445888
Q ss_pred HHhhccCCeEEEEEeC
Q 027388 192 VSALLRPGGTFIGTMP 207 (224)
Q Consensus 192 ~~~~lk~gG~li~~~~ 207 (224)
..+.|+|||.+++++.
T Consensus 211 Ra~eL~pGG~mvl~~~ 226 (384)
T 2efj_A 211 HSEELISRGRMLLTFI 226 (384)
T ss_dssp HHHHEEEEEEEEEEEE
T ss_pred HHHHhccCCeEEEEEe
Confidence 8999999999999854
No 283
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.66 E-value=2.3e-08 Score=83.31 Aligned_cols=77 Identities=18% Similarity=0.088 Sum_probs=60.0
Q ss_pred CCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccc--cCCCCeeEEeccccccccccccC
Q 027388 84 RGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRK--KFSFPARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~ 161 (224)
++.+|||+|||+|..+..++.. ..+|++||+|+.+++.|++++.. . ++ .+++++++|+.+.... .
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~-g~~V~~VD~s~~~l~~Ar~N~~~--------~~~gl-~~i~~i~~Da~~~L~~-~-- 159 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSK-ASQGIYIERNDETAVAARHNIPL--------LLNEG-KDVNILTGDFKEYLPL-I-- 159 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHH--------HSCTT-CEEEEEESCGGGSHHH-H--
T ss_pred CCCEEEEeCCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHhHHH--------hccCC-CcEEEEECcHHHhhhh-c--
Confidence 4789999999999999888754 56999999999999999999762 2 23 4699999999874210 0
Q ss_pred CCCCeeEEEEcc
Q 027388 162 DDAPFDICSCQF 173 (224)
Q Consensus 162 ~~~~~D~i~~~~ 173 (224)
....||+|++.-
T Consensus 160 ~~~~fDvV~lDP 171 (410)
T 3ll7_A 160 KTFHPDYIYVDP 171 (410)
T ss_dssp HHHCCSEEEECC
T ss_pred cCCCceEEEECC
Confidence 125899999863
No 284
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.64 E-value=1.6e-07 Score=73.88 Aligned_cols=86 Identities=15% Similarity=0.134 Sum_probs=66.9
Q ss_pred HHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccc
Q 027388 73 IKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCY 152 (224)
Q Consensus 73 ~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~ 152 (224)
+..++..+.+.++..+||.+||.|+++..+++. .++|+|+|.++.+++.|++ +. ..++.++++++.
T Consensus 11 l~e~le~L~~~~gg~~VD~T~G~GGHS~~il~~-~g~VigiD~Dp~Ai~~A~~-L~------------~~rv~lv~~~f~ 76 (285)
T 1wg8_A 11 YQEALDLLAVRPGGVYVDATLGGAGHARGILER-GGRVIGLDQDPEAVARAKG-LH------------LPGLTVVQGNFR 76 (285)
T ss_dssp HHHHHHHHTCCTTCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHH-TC------------CTTEEEEESCGG
T ss_pred HHHHHHhhCCCCCCEEEEeCCCCcHHHHHHHHC-CCEEEEEeCCHHHHHHHHh-hc------------cCCEEEEECCcc
Confidence 344566666778899999999999999999876 6699999999999999998 76 146999999998
Q ss_pred ccccccccCCCCCeeEEEEc
Q 027388 153 EVHLDKVLADDAPFDICSCQ 172 (224)
Q Consensus 153 ~~~~~~~~~~~~~~D~i~~~ 172 (224)
++.........+++|.|++.
T Consensus 77 ~l~~~L~~~g~~~vDgIL~D 96 (285)
T 1wg8_A 77 HLKRHLAALGVERVDGILAD 96 (285)
T ss_dssp GHHHHHHHTTCSCEEEEEEE
T ss_pred hHHHHHHHcCCCCcCEEEeC
Confidence 87521100023579999964
No 285
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.59 E-value=2.3e-07 Score=75.90 Aligned_cols=114 Identities=11% Similarity=0.051 Sum_probs=79.4
Q ss_pred CCCeEEEecCCCchhHHHHHhh---------------c--CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeE
Q 027388 84 RGDVVLDLACGKGGDLIKWDKA---------------K--IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARL 146 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~~---------------~--~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~ 146 (224)
...+|+|+||++|.++..+... . .-.++..|+..+....+.+.+.... . ..+..|
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~-~-------~~~~~f 122 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEN-D-------VDGVCF 122 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSC-S-------CTTCEE
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhc-c-------cCCCEE
Confidence 3467999999999987754332 1 1358899999999999998887321 0 002344
Q ss_pred EeccccccccccccCCCCCeeEEEEccccccccCC-----------------------------HHHHHHHHHHHHhhcc
Q 027388 147 ICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWST-----------------------------EARARRALANVSALLR 197 (224)
Q Consensus 147 ~~~d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~-----------------------------~~~~~~~l~~~~~~lk 197 (224)
+.+....+- ...++.+++|+|+++.++||+... ..|...+|+...+.|+
T Consensus 123 ~~gvpgSFy--~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~ 200 (359)
T 1m6e_X 123 INGVPGSFY--GRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVV 200 (359)
T ss_dssp EEEEESCSS--SCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBC
T ss_pred EEecchhhh--hccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 444333221 111268999999999999998331 2366778999999999
Q ss_pred CCeEEEEEeC
Q 027388 198 PGGTFIGTMP 207 (224)
Q Consensus 198 ~gG~li~~~~ 207 (224)
|||.+++++.
T Consensus 201 pGG~mvl~~~ 210 (359)
T 1m6e_X 201 PGGRMVLTIL 210 (359)
T ss_dssp TTCEEEEEEE
T ss_pred CCceEEEEEe
Confidence 9999998743
No 286
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.57 E-value=2.1e-08 Score=78.66 Aligned_cols=91 Identities=9% Similarity=-0.072 Sum_probs=61.2
Q ss_pred hhcCC--CeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCccccccccc-CCCCeeEEeccccccccc
Q 027388 81 YARRG--DVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKK-FSFPARLICGDCYEVHLD 157 (224)
Q Consensus 81 ~~~~~--~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~-~~~~v~~~~~d~~~~~~~ 157 (224)
...++ .+|||+|||+|..+..++..+ ++|++||.++.+.+.+++.+..- ..|....+ +..+++++++|+.++...
T Consensus 83 ~l~~g~~~~VLDl~~G~G~dal~lA~~g-~~V~~vE~~~~~~~l~~~~l~~a-~~~~~~~~~l~~~i~~~~~D~~~~L~~ 160 (258)
T 2oyr_A 83 GIKGDYLPDVVDATAGLGRDAFVLASVG-CRVRMLERNPVVAALLDDGLARG-YADAEIGGWLQERLQLIHASSLTALTD 160 (258)
T ss_dssp TCBTTBCCCEEETTCTTCHHHHHHHHHT-CCEEEEECCHHHHHHHHHHHHHH-HHCTTTHHHHHHHEEEEESCHHHHSTT
T ss_pred cccCCCCCEEEEcCCcCCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHH-HhhHhhhhhhhcCEEEEECCHHHHHHh
Confidence 34556 899999999999999988664 48999999998766665554310 00000111 224689999998764211
Q ss_pred cccCCCCCeeEEEEcccccc
Q 027388 158 KVLADDAPFDICSCQFAMHY 177 (224)
Q Consensus 158 ~~~~~~~~~D~i~~~~~l~~ 177 (224)
....||+|++.-.+.+
T Consensus 161 ----~~~~fDvV~lDP~y~~ 176 (258)
T 2oyr_A 161 ----ITPRPQVVYLDPMFPH 176 (258)
T ss_dssp ----CSSCCSEEEECCCCCC
T ss_pred ----CcccCCEEEEcCCCCC
Confidence 1247999999876654
No 287
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.57 E-value=7.3e-07 Score=76.99 Aligned_cols=149 Identities=17% Similarity=0.151 Sum_probs=97.2
Q ss_pred cCCceehhhhHHHHHHHHHHHhhcCCCeEEEecCCCchhHHHHHhh--------------cCCeEEEEeCChhHHHHHHH
Q 027388 60 ASPIIHLKKLNNWIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKA--------------KIGYYVGIDIAEGSIEDCRT 125 (224)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~--------------~~~~~~gvD~s~~~~~~a~~ 125 (224)
...+++++.+..++..+ +.+.++.+|+|.+||+|.++...... ....++|+|+++.+...|+.
T Consensus 196 ~GqfyTP~~Vv~lmv~l---~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~m 272 (530)
T 3ufb_A 196 SGEFYTPRPVVRFMVEV---MDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQM 272 (530)
T ss_dssp CCCCCCCHHHHHHHHHH---HCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHH
T ss_pred CceECCcHHHHHHHHHh---hccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHH
Confidence 45677888876655443 44567789999999999998876532 12469999999999999988
Q ss_pred hccCCcccccccccCCCCeeEEeccccccccccccCCCCCeeEEEEcccccccc------------CCHHHHHHHHHHHH
Q 027388 126 RYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSW------------STEARARRALANVS 193 (224)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~------------~~~~~~~~~l~~~~ 193 (224)
++. .++.. ...+.++|....+..... ....||+|+++-.+.--+ ...+....++..+.
T Consensus 273 Nl~--------lhg~~-~~~I~~~dtL~~~~~~~~-~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l 342 (530)
T 3ufb_A 273 NLL--------LHGLE-YPRIDPENSLRFPLREMG-DKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIM 342 (530)
T ss_dssp HHH--------HHTCS-CCEEECSCTTCSCGGGCC-GGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHH
T ss_pred HHH--------hcCCc-cccccccccccCchhhhc-ccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHH
Confidence 765 12222 245667776654432111 245799999986553210 11112345778888
Q ss_pred hhcc-------CCeEEEEEeCCh--------HHHHHHhhhccc
Q 027388 194 ALLR-------PGGTFIGTMPDA--------NVIIKKLREEHF 221 (224)
Q Consensus 194 ~~lk-------~gG~li~~~~~~--------~~~~~~~~~~gf 221 (224)
+.|+ +||++.+.+|+. ..+++.|-+.+.
T Consensus 343 ~~Lk~~~~~l~~gGr~avVlP~g~Lf~~~~~~~iRk~Lle~~~ 385 (530)
T 3ufb_A 343 RKLKRPGHGSDNGGRAAVVVPNGTLFSDGISARIKEELLKNFN 385 (530)
T ss_dssp HHBCCTTSSSSSCCEEEEEEEHHHHHCCTHHHHHHHHHHHHSE
T ss_pred HHhhhhhhccCCCceEEEEecchhhhccchHHHHHHHHhhcCE
Confidence 8886 699988887742 246666665553
No 288
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.53 E-value=7.1e-07 Score=73.20 Aligned_cols=121 Identities=20% Similarity=0.167 Sum_probs=81.4
Q ss_pred cCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCC
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (224)
.++++||=||.|.|..+..+++....+++.||+++..++.|++.+....... -...-..+++++.+|...+-..... .
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~-~d~pr~~rv~vii~Da~~fl~~~~~-~ 281 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDV-LDNLKGDCYQVLIEDCIPVLKRYAK-E 281 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----C-CSSSEETTEEEEESCHHHHHHHHHH-H
T ss_pred CCCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhh-hccccccceeeehHHHHHHHHhhhh-c
Confidence 3578999999999999999987666789999999999999999875210000 0001123578899997654310000 2
Q ss_pred CCCeeEEEEcccccccc------CCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 163 DAPFDICSCQFAMHYSW------STEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 163 ~~~~D~i~~~~~l~~~~------~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
.+.||+|+....-.... ...--...+++.+++.|+|||+++..
T Consensus 282 ~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q 330 (381)
T 3c6k_A 282 GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQ 330 (381)
T ss_dssp TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred cCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 46899999764211000 01122467889999999999999874
No 289
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.52 E-value=7.5e-07 Score=73.04 Aligned_cols=120 Identities=16% Similarity=0.128 Sum_probs=83.7
Q ss_pred HhhcCCCeEEEecCCCchhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccc
Q 027388 80 LYARRGDVVLDLACGKGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK 158 (224)
Q Consensus 80 ~~~~~~~~iLDiGcG~G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 158 (224)
+.+.++.+|||+++|.|+-+..++... .+.++++|+++..+...++++...+.. ......++.+...|...++..
T Consensus 144 L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~---~~~~~~~v~v~~~D~~~~~~~- 219 (359)
T 4fzv_A 144 LGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPE---EIRDGNQVRVTSWDGRKWGEL- 219 (359)
T ss_dssp HCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCT---TTTTSSSEEEECCCGGGHHHH-
T ss_pred hCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhh---hhccCCceEEEeCchhhcchh-
Confidence 456788999999999999998887653 347999999999999988887522111 011234678888888765421
Q ss_pred ccCCCCCeeEEEEc----cc----cc------cccCCH-------HHHHHHHHHHHhhccCCeEEEEEeC
Q 027388 159 VLADDAPFDICSCQ----FA----MH------YSWSTE-------ARARRALANVSALLRPGGTFIGTMP 207 (224)
Q Consensus 159 ~~~~~~~~D~i~~~----~~----l~------~~~~~~-------~~~~~~l~~~~~~lk~gG~li~~~~ 207 (224)
..+.||.|++. +. +. +-+ .. .-+..+|....+.|||||+|+.+|.
T Consensus 220 ---~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~-~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTC 285 (359)
T 4fzv_A 220 ---EGDTYDRVLVDVPCTTDRHSLHEEENNIFKRS-RKKERQILPVLQVQLLAAGLLATKPGGHVVYSTC 285 (359)
T ss_dssp ---STTCEEEEEEECCCCCHHHHTTCCTTCTTSGG-GHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEES
T ss_pred ---ccccCCEEEECCccCCCCCcccccChhhhhhC-CHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeC
Confidence 35789999953 21 10 000 11 1245788899999999999998866
No 290
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.52 E-value=3.8e-07 Score=71.88 Aligned_cols=108 Identities=17% Similarity=0.170 Sum_probs=67.8
Q ss_pred hcCCCeEEEecCCCchhHHHHHhh-cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccccc
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~-~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (224)
..++.+||||||++|.|+..+++. ....++|+|+...+..... .. .....++.....++.-..+
T Consensus 79 ~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~--~~---------~~~~~~iv~~~~~~di~~l---- 143 (300)
T 3eld_A 79 LRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPI--HM---------QTLGWNIVKFKDKSNVFTM---- 143 (300)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCC--CC---------CBTTGGGEEEECSCCTTTS----
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccccc--cc---------cccCCceEEeecCceeeec----
Confidence 457889999999999999998864 4457889999764311100 00 0011123333333221222
Q ss_pred CCCCCeeEEEEccccccccCCHHH-----HHHHHHHHHhhccCC-eEEEEEeCC
Q 027388 161 ADDAPFDICSCQFAMHYSWSTEAR-----ARRALANVSALLRPG-GTFIGTMPD 208 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~~~~~~~-----~~~~l~~~~~~lk~g-G~li~~~~~ 208 (224)
....+|+|+|..+.. . +... ...++.-+.++|+|| |.|++....
T Consensus 144 -~~~~~DlVlsD~APn-s--G~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 144 -PTEPSDTLLCDIGES-S--SNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp -CCCCCSEEEECCCCC-C--SSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred -CCCCcCEEeecCcCC-C--CCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 357899999987765 1 1111 133477778999999 999998776
No 291
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.50 E-value=2.3e-06 Score=67.77 Aligned_cols=109 Identities=14% Similarity=0.075 Sum_probs=79.1
Q ss_pred cCCCeEEEecCCCchhHHHHHhh------cCCeEEEEeCChh--------------------------HHHHHHHhccCC
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKA------KIGYYVGIDIAEG--------------------------SIEDCRTRYNGD 130 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~------~~~~~~gvD~s~~--------------------------~~~~a~~~~~~~ 130 (224)
..++.|||+|+..|.-+..++.. ...+++++|..+. .++.+++++.
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~-- 182 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFR-- 182 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHH--
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHH--
Confidence 45789999999999977776542 2568999996422 3566777766
Q ss_pred cccccccccC-CCCeeEEeccccccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCC
Q 027388 131 ADHHQRRKKF-SFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (224)
Q Consensus 131 ~~~~~~~~~~-~~~v~~~~~d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~ 208 (224)
..++ ..+++++.+++.+.... . +.++||+|+...-.+ .....++..+...|+|||++++.-..
T Consensus 183 ------~~gl~~~~I~li~Gda~etL~~-~--~~~~~d~vfIDaD~y------~~~~~~Le~~~p~L~pGGiIv~DD~~ 246 (282)
T 2wk1_A 183 ------NYDLLDEQVRFLPGWFKDTLPT-A--PIDTLAVLRMDGDLY------ESTWDTLTNLYPKVSVGGYVIVDDYM 246 (282)
T ss_dssp ------HTTCCSTTEEEEESCHHHHSTT-C--CCCCEEEEEECCCSH------HHHHHHHHHHGGGEEEEEEEEESSCT
T ss_pred ------HcCCCcCceEEEEeCHHHHHhh-C--CCCCEEEEEEcCCcc------ccHHHHHHHHHhhcCCCEEEEEcCCC
Confidence 3344 36799999998654221 1 346899999876432 44668899999999999999997544
No 292
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.45 E-value=2.2e-06 Score=70.00 Aligned_cols=113 Identities=14% Similarity=0.093 Sum_probs=73.6
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccC
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (224)
+.++.++||+||++|+++..+++. ...|++||+.+ |-..... ..+|.++++|......
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r-g~~V~aVD~~~-l~~~l~~---------------~~~V~~~~~d~~~~~~----- 266 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR-NMWVYSVDNGP-MAQSLMD---------------TGQVTWLREDGFKFRP----- 266 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT-TCEEEEECSSC-CCHHHHT---------------TTCEEEECSCTTTCCC-----
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC-CCEEEEEEhhh-cChhhcc---------------CCCeEEEeCccccccC-----
Confidence 468999999999999999998765 45999999865 2222211 3358999999877664
Q ss_pred CCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEE-EEeCC----------hHHHHHHhhhccc
Q 027388 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFI-GTMPD----------ANVIIKKLREEHF 221 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li-~~~~~----------~~~~~~~~~~~gf 221 (224)
....||+|+|..+.. .......+..+......++.++ +..+- ...+...|+..||
T Consensus 267 ~~~~~D~vvsDm~~~-----p~~~~~l~~~wl~~~~~~~aI~~lKL~mk~~~~~l~~~~~~i~~~l~~~g~ 332 (375)
T 4auk_A 267 TRSNISWMVCDMVEK-----PAKVAALMAQWLVNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGI 332 (375)
T ss_dssp CSSCEEEEEECCSSC-----HHHHHHHHHHHHHTTSCSEEEEEEECCSSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCcCEEEEcCCCC-----hHHhHHHHHHHHhccccceEEEEEEecccchHHHHHHHHHHHHHHHHhcCc
Confidence 457899999988764 2344444444444444444333 33332 2344455666665
No 293
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.43 E-value=8.7e-07 Score=68.41 Aligned_cols=113 Identities=21% Similarity=0.211 Sum_probs=66.6
Q ss_pred hhcCCCeEEEecCCCchhHHHHHhh-cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCe---eEEec-cccccc
Q 027388 81 YARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPA---RLICG-DCYEVH 155 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~G~~~~~l~~~-~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v---~~~~~-d~~~~~ 155 (224)
.++++.+|||+||+.|.|+...+.. ....+.|.++.... . ... .......+ .+.++ |+.++
T Consensus 70 likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~----~~P--------~~~~~~Gv~~i~~~~G~Df~~~- 135 (269)
T 2px2_A 70 FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H----EEP--------MLMQSYGWNIVTMKSGVDVFYK- 135 (269)
T ss_dssp SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S----CCC--------CCCCSTTGGGEEEECSCCGGGS-
T ss_pred CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c----cCC--------CcccCCCceEEEeeccCCccCC-
Confidence 4678899999999999999988754 12233344433321 0 000 11111223 44546 88763
Q ss_pred cccccCCCCCeeEEEEccccccccCCHHHHH---HHHHHHHhhccCCe-EEEEEeCCh--HHHHH
Q 027388 156 LDKVLADDAPFDICSCQFAMHYSWSTEARAR---RALANVSALLRPGG-TFIGTMPDA--NVIIK 214 (224)
Q Consensus 156 ~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~---~~l~~~~~~lk~gG-~li~~~~~~--~~~~~ 214 (224)
....+|+|+|..+-. --...-|.. .+|.-+.++|+||| .|++..... ..+.+
T Consensus 136 ------~~~~~DvVLSDMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFqg~~~~~~~ 193 (269)
T 2px2_A 136 ------PSEISDTLLCDIGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILCPYMPKVIE 193 (269)
T ss_dssp ------CCCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTSHHHHH
T ss_pred ------CCCCCCEEEeCCCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECCCCchHHHH
Confidence 246899999987543 100111211 25666778999999 999887664 55544
No 294
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.35 E-value=6.1e-06 Score=64.86 Aligned_cols=124 Identities=19% Similarity=0.252 Sum_probs=76.4
Q ss_pred HHHHHhhcCCCeEEEecCCCchhHHHHHhh-cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEec-cccc
Q 027388 76 VLVQLYARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICG-DCYE 153 (224)
Q Consensus 76 ~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~-~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~-d~~~ 153 (224)
+.....+.++.+||||||++|.++..++.. +...|+|+|+-..-.+. ....+ +.++ ..+.+..+ |+..
T Consensus 86 i~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~--P~~~~-------ql~w-~lV~~~~~~Dv~~ 155 (321)
T 3lkz_A 86 LVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEE--PQLVQ-------SYGW-NIVTMKSGVDVFY 155 (321)
T ss_dssp HHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCC--CCCCC-------BTTG-GGEEEECSCCTTS
T ss_pred HHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccC--cchhh-------hcCC-cceEEEeccCHhh
Confidence 344444567889999999999999977654 44579999987742110 00000 0111 22777777 7755
Q ss_pred cccccccCCCCCeeEEEEccccccccCCHHHHH---HHHHHHHhhccCC-eEEEEEeCCh--HHHHHHhh
Q 027388 154 VHLDKVLADDAPFDICSCQFAMHYSWSTEARAR---RALANVSALLRPG-GTFIGTMPDA--NVIIKKLR 217 (224)
Q Consensus 154 ~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~---~~l~~~~~~lk~g-G~li~~~~~~--~~~~~~~~ 217 (224)
++ ...+|+|+|... +--..+.-+.. .+|.-+.+.|++| |.|++....+ ..+.+.++
T Consensus 156 l~-------~~~~D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~pY~~~v~e~l~ 217 (321)
T 3lkz_A 156 RP-------SECCDTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCPYMPKVIEKME 217 (321)
T ss_dssp SC-------CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTSHHHHHHHH
T ss_pred CC-------CCCCCEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCCCChHHHHHHH
Confidence 54 367999999765 32111122222 2566667889998 8999886665 55545444
No 295
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.20 E-value=2e-05 Score=60.04 Aligned_cols=114 Identities=18% Similarity=0.166 Sum_probs=71.1
Q ss_pred HHHHHhhcCCCeEEEecCCCchhHHHHHhh-cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEec-cccc
Q 027388 76 VLVQLYARRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICG-DCYE 153 (224)
Q Consensus 76 ~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~-~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~-d~~~ 153 (224)
+.....+.++.+|||+||++|.++...+.. +...|+++|+-..-.+. .... +.-..+.++|..+ |+..
T Consensus 70 i~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~--P~~~--------~s~gwn~v~fk~gvDv~~ 139 (267)
T 3p8z_A 70 FVERNMVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEE--PVPM--------STYGWNIVKLMSGKDVFY 139 (267)
T ss_dssp HHHTTSSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCC--CCCC--------CCTTTTSEEEECSCCGGG
T ss_pred HHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccC--cchh--------hhcCcCceEEEeccceee
Confidence 333335567889999999999999977654 45579999987632210 0000 0111235899988 8754
Q ss_pred cccccccCCCCCeeEEEEccccccccCCHHHH---HHHHHHHHhhccCCeEEEEEeCC
Q 027388 154 VHLDKVLADDAPFDICSCQFAMHYSWSTEARA---RRALANVSALLRPGGTFIGTMPD 208 (224)
Q Consensus 154 ~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~---~~~l~~~~~~lk~gG~li~~~~~ 208 (224)
.+ ..++|.|+|...-.. ..+.-+. ..+|.-+.+.|++ |.+++....
T Consensus 140 ~~-------~~~~DtllcDIgeSs-~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~ 188 (267)
T 3p8z_A 140 LP-------PEKCDTLLCDIGESS-PSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLN 188 (267)
T ss_dssp CC-------CCCCSEEEECCCCCC-SCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESC
T ss_pred cC-------CccccEEEEecCCCC-CChhhhhhHHHHHHHHHHHhccc-CCEEEEEcc
Confidence 43 467999999765311 0111222 2256666788988 788877443
No 296
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.14 E-value=3.3e-06 Score=59.64 Aligned_cols=86 Identities=14% Similarity=0.010 Sum_probs=57.6
Q ss_pred cCCCeEEEecCCCc-hhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccC
Q 027388 83 RRGDVVLDLACGKG-GDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 83 ~~~~~iLDiGcG~G-~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (224)
..+.+|||||||.| ..+..+++.....|+++|+++..++ +++.|+.+-...
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~------------------------~v~dDiF~P~~~---- 85 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG------------------------IVRDDITSPRME---- 85 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT------------------------EECCCSSSCCHH----
T ss_pred CCCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc------------------------eEEccCCCCccc----
Confidence 45679999999999 5888887645568999999984333 566776543221
Q ss_pred CCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
.-..||+|.+... ..++...+.++.+... .-++|.
T Consensus 86 ~Y~~~DLIYsirP-------P~El~~~i~~lA~~v~--adliI~ 120 (153)
T 2k4m_A 86 IYRGAALIYSIRP-------PAEIHSSLMRVADAVG--ARLIIK 120 (153)
T ss_dssp HHTTEEEEEEESC-------CTTTHHHHHHHHHHHT--CEEEEE
T ss_pred ccCCcCEEEEcCC-------CHHHHHHHHHHHHHcC--CCEEEE
Confidence 0158999987653 2455566666665443 455554
No 297
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.89 E-value=4.5e-05 Score=61.42 Aligned_cols=88 Identities=15% Similarity=0.091 Sum_probs=65.1
Q ss_pred HHHHHHHHhhcCCCeEEEecCCCchhHHHHHhh--cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecc
Q 027388 73 IKSVLVQLYARRGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGD 150 (224)
Q Consensus 73 ~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~--~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d 150 (224)
+..++..+.+.++..++|..||.|+++..+++. ..++|+|+|.++.+++.++ ++. ..++++++++
T Consensus 46 l~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL~------------~~Rv~lv~~n 112 (347)
T 3tka_A 46 LDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TID------------DPRFSIIHGP 112 (347)
T ss_dssp THHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TCC------------CTTEEEEESC
T ss_pred HHHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hhc------------CCcEEEEeCC
Confidence 444666666778999999999999999999875 3568999999999999994 543 4568999999
Q ss_pred ccccccccccC-CCCCeeEEEEcc
Q 027388 151 CYEVHLDKVLA-DDAPFDICSCQF 173 (224)
Q Consensus 151 ~~~~~~~~~~~-~~~~~D~i~~~~ 173 (224)
+.++....... ..+++|.|+...
T Consensus 113 F~~l~~~L~~~g~~~~vDgILfDL 136 (347)
T 3tka_A 113 FSALGEYVAERDLIGKIDGILLDL 136 (347)
T ss_dssp GGGHHHHHHHTTCTTCEEEEEEEC
T ss_pred HHHHHHHHHhcCCCCcccEEEECC
Confidence 88764210000 113699998653
No 298
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.89 E-value=2.8e-05 Score=62.17 Aligned_cols=54 Identities=22% Similarity=0.311 Sum_probs=43.4
Q ss_pred HHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhcc
Q 027388 73 IKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYN 128 (224)
Q Consensus 73 ~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~ 128 (224)
++.++... ..++..|||++||+|..+..++. ...+++|+|+++.+++.|++++.
T Consensus 225 ~~~~i~~~-~~~~~~vlD~f~GsGt~~~~a~~-~g~~~~g~e~~~~~~~~a~~r~~ 278 (297)
T 2zig_A 225 AERLVRMF-SFVGDVVLDPFAGTGTTLIAAAR-WGRRALGVELVPRYAQLAKERFA 278 (297)
T ss_dssp HHHHHHHH-CCTTCEEEETTCTTTHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHh-CCCCCEEEECCCCCCHHHHHHHH-cCCeEEEEeCCHHHHHHHHHHHH
Confidence 44444333 36788999999999999988764 44699999999999999999976
No 299
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.75 E-value=0.00019 Score=56.45 Aligned_cols=100 Identities=15% Similarity=0.139 Sum_probs=64.8
Q ss_pred hcCCCeEEEecC------CCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccc
Q 027388 82 ARRGDVVLDLAC------GKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH 155 (224)
Q Consensus 82 ~~~~~~iLDiGc------G~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 155 (224)
.+.+.+|||+|+ ..|.+...-.....+.++++|+.+-. . .. -.++++|.....
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS~VLr~~~p~g~~VVavDL~~~~-------------------s-da-~~~IqGD~~~~~ 165 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFV-------------------S-DA-DSTLIGDCATVH 165 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCCB-------------------C-SS-SEEEESCGGGEE
T ss_pred ecCCCEEEeCCCCCCCCCCCcHHHHHHhCCCCcEEEEeeCcccc-------------------c-CC-CeEEEccccccc
Confidence 457899999996 66774332211222489999997711 0 11 245899976544
Q ss_pred cccccCCCCCeeEEEEccccc---ccc----CCHHHHHHHHHHHHhhccCCeEEEEEeCC
Q 027388 156 LDKVLADDAPFDICSCQFAMH---YSW----STEARARRALANVSALLRPGGTFIGTMPD 208 (224)
Q Consensus 156 ~~~~~~~~~~~D~i~~~~~l~---~~~----~~~~~~~~~l~~~~~~lk~gG~li~~~~~ 208 (224)
. ..+||+|++..+-. +.. .+..-.+.++.-+.+.|+|||.|++....
T Consensus 166 ~------~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQ 219 (344)
T 3r24_A 166 T------ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITE 219 (344)
T ss_dssp E------SSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred c------CCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEec
Confidence 3 58899999876422 110 01123567778888999999999998553
No 300
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.72 E-value=0.00065 Score=56.05 Aligned_cols=122 Identities=15% Similarity=0.144 Sum_probs=79.7
Q ss_pred CeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccc---cCC
Q 027388 86 DVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKV---LAD 162 (224)
Q Consensus 86 ~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~---~~~ 162 (224)
.+++|+.||.|.+...+...++..+.++|+++.+++..+.++. ...++++|+.++..... ...
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~~--------------~~~~~~~DI~~~~~~~~~~~~~~ 68 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINFP--------------RSLHVQEDVSLLNAEIIKGFFKN 68 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHCT--------------TSEEECCCGGGCCHHHHHHHHCS
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhCC--------------CCceEecChhhcCHHHHHhhccc
Confidence 5799999999999999877777778899999999999988865 25678888887643211 002
Q ss_pred CCCeeEEEEcccccccc--------CCHHHHHHHHHHHHhhccCCeEEEEEeCC---------hHHHHHHhhhcccc
Q 027388 163 DAPFDICSCQFAMHYSW--------STEARARRALANVSALLRPGGTFIGTMPD---------ANVIIKKLREEHFC 222 (224)
Q Consensus 163 ~~~~D~i~~~~~l~~~~--------~~~~~~~~~l~~~~~~lk~gG~li~~~~~---------~~~~~~~~~~~gf~ 222 (224)
...+|+|+....-+-+. +....+...+-++.+.++|.-+++=.++. ...+. .|.+.||.
T Consensus 69 ~~~~D~i~ggpPCQ~fS~ag~~~~~d~r~~L~~~~~~~v~~~~P~~~v~ENV~gl~s~~~~~~~~~i~-~l~~~GY~ 144 (376)
T 3g7u_A 69 DMPIDGIIGGPPCQGFSSIGKGNPDDSRNQLYMHFYRLVSELQPLFFLAENVPGIMQEKYSGIRNKAF-NLVSGDYD 144 (376)
T ss_dssp CCCCCEEEECCCCCTTC-------CHHHHHHHHHHHHHHHHHCCSEEEEEECTTTTCGGGHHHHHHHH-HHHHTTEE
T ss_pred CCCeeEEEecCCCCCcccccCCCCCCchHHHHHHHHHHHHHhCCCEEEEecchHhhccCcHHHHHHHH-HHHcCCCc
Confidence 46899999665322210 00112222334555667886665544443 23455 77777763
No 301
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.70 E-value=0.00016 Score=59.10 Aligned_cols=71 Identities=15% Similarity=0.137 Sum_probs=55.3
Q ss_pred HHHHHHHHhhc------CCCeEEEecCCCchhHHHHHhh-cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCee
Q 027388 73 IKSVLVQLYAR------RGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPAR 145 (224)
Q Consensus 73 ~~~~~~~~~~~------~~~~iLDiGcG~G~~~~~l~~~-~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~ 145 (224)
+..++..+.+. ++..|||||.|.|.++..++.. ...+++++|+++.++...++.+. ..+++
T Consensus 41 ~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~~------------~~~l~ 108 (353)
T 1i4w_A 41 YNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKFE------------GSPLQ 108 (353)
T ss_dssp HHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHTT------------TSSCE
T ss_pred HHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhcc------------CCCEE
Confidence 44455554443 3589999999999999999864 35689999999999999887653 34689
Q ss_pred EEeccccccc
Q 027388 146 LICGDCYEVH 155 (224)
Q Consensus 146 ~~~~d~~~~~ 155 (224)
++.+|+..++
T Consensus 109 ii~~D~l~~~ 118 (353)
T 1i4w_A 109 ILKRDPYDWS 118 (353)
T ss_dssp EECSCTTCHH
T ss_pred EEECCccchh
Confidence 9999997654
No 302
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.64 E-value=0.00024 Score=57.92 Aligned_cols=122 Identities=15% Similarity=0.184 Sum_probs=76.5
Q ss_pred CCeEEEecCCCchhHHHHHhhc--CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCC
Q 027388 85 GDVVLDLACGKGGDLIKWDKAK--IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (224)
Q Consensus 85 ~~~iLDiGcG~G~~~~~l~~~~--~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (224)
..+++|+.||.|.+...+...+ ...++++|+++.+++..+.++. ...++++|+.++..... +
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~--------------~~~~~~~Di~~~~~~~~--~ 65 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP--------------HTQLLAKTIEGITLEEF--D 65 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT--------------TSCEECSCGGGCCHHHH--H
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc--------------ccccccCCHHHccHhHc--C
Confidence 3579999999999999887666 4578899999999999999876 24567888877643211 1
Q ss_pred CCCeeEEEEccccccccC-----CHHH-HHHHHH---HHHhhcc--CCeEEEEEeCC------hHHHHHHhhhcccc
Q 027388 163 DAPFDICSCQFAMHYSWS-----TEAR-ARRALA---NVSALLR--PGGTFIGTMPD------ANVIIKKLREEHFC 222 (224)
Q Consensus 163 ~~~~D~i~~~~~l~~~~~-----~~~~-~~~~l~---~~~~~lk--~gG~li~~~~~------~~~~~~~~~~~gf~ 222 (224)
...+|+|+....-+-+.. ...+ ...++. ++.+.++ |.-+++=.++. ...+...|.+.||.
T Consensus 66 ~~~~D~l~~gpPCq~fS~ag~~~g~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~l~~~~~~~~i~~~l~~~GY~ 142 (343)
T 1g55_A 66 RLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLHILDILPRLQKLPKYILLENVKGFEVSSTRDLLIQTIENCGFQ 142 (343)
T ss_dssp HHCCSEEEECCC------------------CHHHHHHHHGGGCSSCCSEEEEEEETTGGGSHHHHHHHHHHHHTTEE
T ss_pred cCCcCEEEEcCCCcchhhcCCcCCccCccchHHHHHHHHHHHhcCCCCEEEEeCCccccCHHHHHHHHHHHHHCCCe
Confidence 126899997654222100 0011 112333 4445556 76555534443 35677788888863
No 303
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.62 E-value=0.00017 Score=56.73 Aligned_cols=121 Identities=8% Similarity=-0.101 Sum_probs=85.7
Q ss_pred CCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCCC
Q 027388 84 RGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADD 163 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 163 (224)
.+..+||+=+|+|.++++++. ...+++.+|.++..++..++++.. ..+++++..|....... ...+.
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS-~~d~~vfvE~~~~a~~~L~~Nl~~-----------~~~~~V~~~D~~~~L~~-l~~~~ 157 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLR-SQDRLYLCELHPTEYNFLLKLPHF-----------NKKVYVNHTDGVSKLNA-LLPPP 157 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSC-TTSEEEEECCSHHHHHHHTTSCCT-----------TSCEEEECSCHHHHHHH-HCSCT
T ss_pred cCCCceeEeCCcHHHHHHHcC-CCCeEEEEeCCHHHHHHHHHHhCc-----------CCcEEEEeCcHHHHHHH-hcCCC
Confidence 466789999999999999876 447999999999999999998861 35689999996542211 11134
Q ss_pred CCeeEEEEccccccccCCHHHHHHHHHHHHh--hccCCeEEEEEeC-----ChHHHHHHhhhccc
Q 027388 164 APFDICSCQFAMHYSWSTEARARRALANVSA--LLRPGGTFIGTMP-----DANVIIKKLREEHF 221 (224)
Q Consensus 164 ~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~--~lk~gG~li~~~~-----~~~~~~~~~~~~gf 221 (224)
..||+|++.-..+. ..+...++..+.+ .+.++|++++=.| ....+.+.+++.|.
T Consensus 158 ~~fdLVfiDPPYe~----k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~~~~~~~~~~~~l~~~~~ 218 (283)
T 2oo3_A 158 EKRGLIFIDPSYER----KEEYKEIPYAIKNAYSKFSTGLYCVWYPVVNKAWTEQFLRKMREISS 218 (283)
T ss_dssp TSCEEEEECCCCCS----TTHHHHHHHHHHHHHHHCTTSEEEEEEEESSHHHHHHHHHHHHHHCS
T ss_pred CCccEEEECCCCCC----CcHHHHHHHHHHHhCccCCCeEEEEEEeccchHHHHHHHHHHHhcCC
Confidence 57999999876652 1356666666665 4568898887555 23556666655553
No 304
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=97.59 E-value=0.002 Score=51.68 Aligned_cols=115 Identities=12% Similarity=0.002 Sum_probs=80.8
Q ss_pred CCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccccc---
Q 027388 84 RGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL--- 160 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~--- 160 (224)
....|++||||--.....+.......++=|| -+..++..++.+...+ .....+..++.+|+.+ .+....
T Consensus 102 g~~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~------~~~~~~~~~v~~Dl~d-~~~~~l~~~ 173 (310)
T 2uyo_A 102 GIRQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHG------VTPTADRREVPIDLRQ-DWPPALRSA 173 (310)
T ss_dssp TCCEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTT------CCCSSEEEEEECCTTS-CHHHHHHHT
T ss_pred CCCeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcC------CCCCCCeEEEecchHh-hHHHHHHhc
Confidence 4468999999987766554322235788999 4888888887775211 1124557889999876 321111
Q ss_pred -CCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCC
Q 027388 161 -ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (224)
Q Consensus 161 -~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~ 208 (224)
+....--++++-++++|+ +.++...+++.+...+.||+.|++...+
T Consensus 174 g~d~~~Pt~~i~Egvl~Yl--~~~~~~~ll~~l~~~~~~gs~l~~d~~~ 220 (310)
T 2uyo_A 174 GFDPSARTAWLAEGLLMYL--PATAQDGLFTEIGGLSAVGSRIAVETSP 220 (310)
T ss_dssp TCCTTSCEEEEECSCGGGS--CHHHHHHHHHHHHHTCCTTCEEEEECCC
T ss_pred cCCCCCCEEEEEechHhhC--CHHHHHHHHHHHHHhCCCCeEEEEEecC
Confidence 122455677788899998 6778899999999999999999998654
No 305
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.57 E-value=2.6e-05 Score=78.18 Aligned_cols=102 Identities=16% Similarity=0.117 Sum_probs=52.7
Q ss_pred CCCeEEEecCCCchhHHHHHhh------cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccc-cc
Q 027388 84 RGDVVLDLACGKGGDLIKWDKA------KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV-HL 156 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~~------~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~ 156 (224)
+..+|||||.|+|..+..++.. ...+|+.+|+|+.+.+.+++++.. ..+.....|.... +.
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~------------~di~~~~~d~~~~~~~ 1307 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQ------------LHVTQGQWDPANPAPG 1307 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHH------------HTEEEECCCSSCCCC-
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhh------------cccccccccccccccC
Confidence 4579999999999876655432 134789999999988888877651 1122211122111 11
Q ss_pred ccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEe
Q 027388 157 DKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (224)
Q Consensus 157 ~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~ 206 (224)
....||+|++..++|-. .+....+.+++++|+|||.+++..
T Consensus 1308 -----~~~~ydlvia~~vl~~t----~~~~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1308 -----SLGKADLLVCNCALATL----GDPAVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp ---------CCEEEEECC------------------------CCEEEEEE
T ss_pred -----CCCceeEEEEccccccc----ccHHHHHHHHHHhcCCCcEEEEEe
Confidence 24579999999999743 678889999999999999988764
No 306
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=97.48 E-value=0.0061 Score=49.39 Aligned_cols=118 Identities=14% Similarity=0.096 Sum_probs=79.6
Q ss_pred cCCCeEEEecCCCchhHHHHHhh-cCCeEEEEeCChhHHHHHHHhccCCccccc------------ccccCCCCeeEEec
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQ------------RRKKFSFPARLICG 149 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~-~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~------------~~~~~~~~v~~~~~ 149 (224)
.+...|+.+|||.......+... ....++-||. +..++.-++.+...+.... ...-...+.+++.+
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~ 174 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAAC 174 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEEC
T ss_pred CCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEec
Confidence 45678999999999998888654 3446778887 6677776666552210000 00001356889999
Q ss_pred ccccccc-----ccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEE-EE
Q 027388 150 DCYEVHL-----DKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFI-GT 205 (224)
Q Consensus 150 d~~~~~~-----~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li-~~ 205 (224)
|+.+... .... ......++++-+++.|+ +.+...++++.+.+.+ |+|.++ +.
T Consensus 175 DL~d~~w~~~ll~~~~-d~~~Ptl~iaEgvL~YL--~~~~~~~ll~~ia~~~-~~~~~v~~e 232 (334)
T 1rjd_A 175 DLNDITETTRLLDVCT-KREIPTIVISECLLCYM--HNNESQLLINTIMSKF-SHGLWISYD 232 (334)
T ss_dssp CTTCHHHHHHHHHTTC-CTTSCEEEEEESCGGGS--CHHHHHHHHHHHHHHC-SSEEEEEEE
T ss_pred CCCCcHHHHHHHHhcC-CCCCCEEEEEcchhhCC--CHHHHHHHHHHHHhhC-CCcEEEEEe
Confidence 9987533 1111 23567888888999998 8888999999999887 667654 44
No 307
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=97.46 E-value=0.0022 Score=51.69 Aligned_cols=118 Identities=13% Similarity=0.079 Sum_probs=79.6
Q ss_pred CeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCCCCC
Q 027388 86 DVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDAP 165 (224)
Q Consensus 86 ~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 165 (224)
.+|||+-||.|.+...+...++..+.++|+++.+++..+.++. -.++++|+.++.... -..
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~~---------------~~~~~~DI~~i~~~~----~~~ 61 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNHS---------------AKLIKGDISKISSDE----FPK 61 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHCC---------------SEEEESCGGGCCGGG----SCC
T ss_pred CeEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHCC---------------CCcccCChhhCCHhh----CCc
Confidence 3799999999999998876777678899999999999988865 357789988876432 357
Q ss_pred eeEEEEccccccc---------cCCHHHHHHHHHHHHhhccCCeEEEEEeCC---------hHHHHHHhhhcccc
Q 027388 166 FDICSCQFAMHYS---------WSTEARARRALANVSALLRPGGTFIGTMPD---------ANVIIKKLREEHFC 222 (224)
Q Consensus 166 ~D~i~~~~~l~~~---------~~~~~~~~~~l~~~~~~lk~gG~li~~~~~---------~~~~~~~~~~~gf~ 222 (224)
+|+++....-+-+ .+....+-..+-++.+.++|.-+++=.++. ...+...|.+.||.
T Consensus 62 ~D~l~ggpPCQ~fS~ag~~~g~~d~R~~L~~~~~r~i~~~~Pk~~~~ENV~gl~~~~~~~~~~~i~~~l~~~GY~ 136 (331)
T 3ubt_Y 62 CDGIIGGPPSQSWSEGGSLRGIDDPRGKLFYEYIRILKQKKPIFFLAENVKGMMAQRHNKAVQEFIQEFDNAGYD 136 (331)
T ss_dssp CSEEECCCCGGGTEETTEECCTTCGGGHHHHHHHHHHHHHCCSEEEEEECCGGGGCTTSHHHHHHHHHHHHHTEE
T ss_pred ccEEEecCCCCCcCCCCCccCCCCchhHHHHHHHHHHhccCCeEEEeeeecccccccccchhhhhhhhhccCCcE
Confidence 8999854321111 112223333344566667886554433442 35677788888863
No 308
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.44 E-value=0.0018 Score=52.35 Aligned_cols=119 Identities=15% Similarity=0.167 Sum_probs=78.2
Q ss_pred CCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCCC
Q 027388 84 RGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADD 163 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 163 (224)
.+.+++|+.||.|.+...+...+...++++|+++..++..+.++.. .. ++|+.++.... .
T Consensus 10 ~~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~--------------~~--~~Di~~~~~~~----~ 69 (327)
T 2c7p_A 10 TGLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGE--------------KP--EGDITQVNEKT----I 69 (327)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSC--------------CC--BSCGGGSCGGG----S
T ss_pred CCCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCC--------------CC--cCCHHHcCHhh----C
Confidence 3578999999999999998777777788999999999999988761 11 67777665321 2
Q ss_pred CCeeEEEEccccccc---------cCCHHHHHHHHHHHHhhccCCeEEEEEeCC---------hHHHHHHhhhcccc
Q 027388 164 APFDICSCQFAMHYS---------WSTEARARRALANVSALLRPGGTFIGTMPD---------ANVIIKKLREEHFC 222 (224)
Q Consensus 164 ~~~D~i~~~~~l~~~---------~~~~~~~~~~l~~~~~~lk~gG~li~~~~~---------~~~~~~~~~~~gf~ 222 (224)
..+|+|+.....+-+ .+....+-..+.++.+.++|.-+++=.++. ...+...|++.||.
T Consensus 70 ~~~D~l~~gpPCQ~fS~ag~~~g~~d~r~~L~~~~~r~i~~~~P~~~~~ENV~gl~~~~~~~~~~~i~~~l~~~GY~ 146 (327)
T 2c7p_A 70 PDHDILCAGFPCQAFSISGKQKGFEDSRGTLFFDIARIVREKKPKVVFMENVKNFASHDNGNTLEVVKNTMNELDYS 146 (327)
T ss_dssp CCCSEEEEECCCTTTCTTSCCCGGGSTTSCHHHHHHHHHHHHCCSEEEEEEEGGGGTGGGGHHHHHHHHHHHHTTBC
T ss_pred CCCCEEEECCCCCCcchhcccCCCcchhhHHHHHHHHHHHhccCcEEEEeCcHHHHhccccHHHHHHHHHHHhCCCE
Confidence 368999966422221 011111223344455567886555444443 24577788888874
No 309
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.32 E-value=0.0022 Score=51.16 Aligned_cols=124 Identities=15% Similarity=0.061 Sum_probs=72.9
Q ss_pred cCCCeEEEecCCCchhHHHHHh----hc-CC--eEEEEeCCh------------hHHHHHHHhccCCcccccccccCCCC
Q 027388 83 RRGDVVLDLACGKGGDLIKWDK----AK-IG--YYVGIDIAE------------GSIEDCRTRYNGDADHHQRRKKFSFP 143 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~----~~-~~--~~~gvD~s~------------~~~~~a~~~~~~~~~~~~~~~~~~~~ 143 (224)
.+.-+|||+|-|+|-+...... .. .. +++.+|..+ ...+........ -......
T Consensus 95 ~~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~-------~~~~~v~ 167 (308)
T 3vyw_A 95 RKVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPE-------YEGERLS 167 (308)
T ss_dssp CSEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSE-------EECSSEE
T ss_pred CCCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCcc-------ccCCcEE
Confidence 3446899999999987654322 12 22 356666421 111111111110 0111223
Q ss_pred eeEEeccccccccccccCCCCCeeEEEEccccccccCCHHHH----HHHHHHHHhhccCCeEEEEEeCChHHHHHHhhhc
Q 027388 144 ARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARA----RRALANVSALLRPGGTFIGTMPDANVIIKKLREE 219 (224)
Q Consensus 144 v~~~~~d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~----~~~l~~~~~~lk~gG~li~~~~~~~~~~~~~~~~ 219 (224)
+.+..+|+.+.-. .. ....||+|+....- +...+ ..+++.+.++++|||+|. +......+++.|.++
T Consensus 168 L~l~~GDa~~~l~-~l--~~~~~Da~flDgFs-----P~kNPeLWs~e~f~~l~~~~~pgg~la-TYtaag~VRR~L~~a 238 (308)
T 3vyw_A 168 LKVLLGDARKRIK-EV--ENFKADAVFHDAFS-----PYKNPELWTLDFLSLIKERIDEKGYWV-SYSSSLSVRKSLLTL 238 (308)
T ss_dssp EEEEESCHHHHGG-GC--CSCCEEEEEECCSC-----TTTSGGGGSHHHHHHHHTTEEEEEEEE-ESCCCHHHHHHHHHT
T ss_pred EEEEechHHHHHh-hh--cccceeEEEeCCCC-----cccCcccCCHHHHHHHHHHhCCCcEEE-EEeCcHHHHHHHHHC
Confidence 4677888765321 11 23579999976521 11222 579999999999999877 344557889999999
Q ss_pred ccc
Q 027388 220 HFC 222 (224)
Q Consensus 220 gf~ 222 (224)
||.
T Consensus 239 GF~ 241 (308)
T 3vyw_A 239 GFK 241 (308)
T ss_dssp TCE
T ss_pred CCE
Confidence 995
No 310
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.29 E-value=0.00063 Score=53.17 Aligned_cols=46 Identities=24% Similarity=0.309 Sum_probs=40.3
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhcc
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYN 128 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~ 128 (224)
..++..|||..||+|..+..... ...+++|+|+++..++.+++++.
T Consensus 210 ~~~~~~vlD~f~GsGtt~~~a~~-~gr~~ig~e~~~~~~~~~~~r~~ 255 (260)
T 1g60_A 210 SNPNDLVLDCFMGSGTTAIVAKK-LGRNFIGCDMNAEYVNQANFVLN 255 (260)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHH
T ss_pred CCCCCEEEECCCCCCHHHHHHHH-cCCeEEEEeCCHHHHHHHHHHHH
Confidence 46789999999999998887654 45699999999999999999976
No 311
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=97.20 E-value=0.0023 Score=51.74 Aligned_cols=122 Identities=12% Similarity=0.190 Sum_probs=76.7
Q ss_pred CCCeEEEecCCCchhHHHHHhhcC--CeE-EEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccccc
Q 027388 84 RGDVVLDLACGKGGDLIKWDKAKI--GYY-VGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~~~~--~~~-~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (224)
...+++|+.||.|.+...+...+. ..+ .++|+++.+++..+.++.. .++++|+.++.....
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~---------------~~~~~DI~~~~~~~i- 72 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKE---------------EVQVKNLDSISIKQI- 72 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC---------------CCBCCCTTTCCHHHH-
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC---------------CcccCChhhcCHHHh-
Confidence 456899999999999998876653 557 7999999999999988761 256778877654322
Q ss_pred CCCCCeeEEEEccccccc--------cCCHHHHHHHHHHHHh----hc--cCCeEEEEEeCC------hHHHHHHhhhcc
Q 027388 161 ADDAPFDICSCQFAMHYS--------WSTEARARRALANVSA----LL--RPGGTFIGTMPD------ANVIIKKLREEH 220 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~--------~~~~~~~~~~l~~~~~----~l--k~gG~li~~~~~------~~~~~~~~~~~g 220 (224)
+...+|+++....-+.+ ....+....++.++.+ .+ +|.-+++=.+++ ...+.+.|++.|
T Consensus 73 -~~~~~Dil~ggpPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lENV~gl~~~~~~~~i~~~l~~~G 151 (327)
T 3qv2_A 73 -ESLNCNTWFMSPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENVPLFKESLVFKEIYNILIKNQ 151 (327)
T ss_dssp -HHTCCCEEEECCCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEEECGGGGGSHHHHHHHHHHHHTT
T ss_pred -ccCCCCEEEecCCccCcccccCCCCCCCccccchhHHHHHHHHHHHhccCCCEEEEEchhhhcChHHHHHHHHHHHhCC
Confidence 12368999965432211 0001112234444444 45 565444433443 356788888888
Q ss_pred cc
Q 027388 221 FC 222 (224)
Q Consensus 221 f~ 222 (224)
|.
T Consensus 152 Y~ 153 (327)
T 3qv2_A 152 YY 153 (327)
T ss_dssp CE
T ss_pred CE
Confidence 73
No 312
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=97.15 E-value=0.056 Score=41.95 Aligned_cols=166 Identities=10% Similarity=0.084 Sum_probs=90.0
Q ss_pred hhhHHHHHHHHHHhhhccccchhhhccCCceeh-hhhHHHHHHH-HHHHhhcCCCeEEEecCCCchhHHHHHhh------
Q 027388 34 ESTKVFARKVADHYSRRTNQTLEEREASPIIHL-KKLNNWIKSV-LVQLYARRGDVVLDLACGKGGDLIKWDKA------ 105 (224)
Q Consensus 34 ~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~iLDiGcG~G~~~~~l~~~------ 105 (224)
.....+.+++.+.+...+.........-+.+.. ..+..++... +-.....-+..|+|+|+-.|.-+..++..
T Consensus 17 ~~~~~~~~~l~~~~~~~~~~~~e~l~~~~~~~~~~~l~~~l~~~~l~~~i~~vpG~ivE~GV~rG~S~~~~a~~~~~l~~ 96 (257)
T 3tos_A 17 PEETETTQRLTKLLTNSPIPTEELVNNLPLFLRRHQMTDLLSMDALYRQVLDVPGVIMEFGVRFGRHLGTFAALRGVYEP 96 (257)
T ss_dssp HHHHHHHHHHHHHHHTCCSCGGGGGGCGGGGCCHHHHHHHHHHHHHHHHTTTSCSEEEEECCTTCHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHhcCCCChHHHHHhHHhhhhHHHHHHHHHHHHHHHHhhCCCCeEEEEecccCHHHHHHHHHHHHhcc
Confidence 344456677777777655544333332222211 1121221111 11111245679999999999877765431
Q ss_pred --cCCeEEEEe-----CChhH-------------------HHHHHHhccCCccccccccc-CCCCeeEEecccccccccc
Q 027388 106 --KIGYYVGID-----IAEGS-------------------IEDCRTRYNGDADHHQRRKK-FSFPARLICGDCYEVHLDK 158 (224)
Q Consensus 106 --~~~~~~gvD-----~s~~~-------------------~~~a~~~~~~~~~~~~~~~~-~~~~v~~~~~d~~~~~~~~ 158 (224)
...+++++| +.... .+...+.+.. ..+-..-+ ...++.++.+++.+....-
T Consensus 97 ~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~--~~~~~~~g~~~~~i~li~G~~~dTL~~~ 174 (257)
T 3tos_A 97 YNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDA--HECSDFFGHVTQRSVLVEGDVRETVPRY 174 (257)
T ss_dssp TCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHH--HHTTSTTTTSCCSEEEEESCHHHHHHHH
T ss_pred cCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHH--HhhhhhcCCCCCcEEEEEecHHHHHHHH
Confidence 246899999 33210 0001110000 00000112 2467999999987643110
Q ss_pred c-cCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeC
Q 027388 159 V-LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (224)
Q Consensus 159 ~-~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~ 207 (224)
. ..+...+|+++...-.+ ......+..+...|+|||++++...
T Consensus 175 l~~~~~~~~dlv~ID~D~Y------~~t~~~le~~~p~l~~GGvIv~DD~ 218 (257)
T 3tos_A 175 LAENPQTVIALAYFDLDLY------EPTKAVLEAIRPYLTKGSIVAFDEL 218 (257)
T ss_dssp HHHCTTCCEEEEEECCCCH------HHHHHHHHHHGGGEEEEEEEEESST
T ss_pred HHhCCCCceEEEEEcCccc------chHHHHHHHHHHHhCCCcEEEEcCC
Confidence 0 01345799999876431 5567788999999999999999765
No 313
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=96.93 E-value=0.0052 Score=49.79 Aligned_cols=121 Identities=15% Similarity=0.191 Sum_probs=76.3
Q ss_pred CeEEEecCCCchhHHHHHhhcC--CeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCCC
Q 027388 86 DVVLDLACGKGGDLIKWDKAKI--GYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADD 163 (224)
Q Consensus 86 ~~iLDiGcG~G~~~~~l~~~~~--~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 163 (224)
.+++|+.||.|.+...+...+. ..+.++|+++..++..+.++. ...++++|+.++..... +.
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~--------------~~~~~~~DI~~~~~~~~--~~ 67 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFP--------------ETNLLNRNIQQLTPQVI--KK 67 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT--------------TSCEECCCGGGCCHHHH--HH
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCC--------------CCceeccccccCCHHHh--cc
Confidence 4799999999999988876554 457799999999999998876 13567788877654222 12
Q ss_pred CCeeEEEEccccccc---------cCCHHHHHHHHHHHHhhcc-CCeEEEEEeCC------hHHHHHHhhhcccc
Q 027388 164 APFDICSCQFAMHYS---------WSTEARARRALANVSALLR-PGGTFIGTMPD------ANVIIKKLREEHFC 222 (224)
Q Consensus 164 ~~~D~i~~~~~l~~~---------~~~~~~~~~~l~~~~~~lk-~gG~li~~~~~------~~~~~~~~~~~gf~ 222 (224)
..+|+++....-+-+ .+....+-..+-++.+.++ |.-+++=.+++ ...+.+.|++.||.
T Consensus 68 ~~~D~l~ggpPCQ~fS~ag~~~~~~d~r~~L~~~~~r~i~~~~~P~~~vlENV~gl~~~~~~~~i~~~l~~~GY~ 142 (333)
T 4h0n_A 68 WNVDTILMSPPCQPFTRNGKYLDDNDPRTNSFLYLIGILDQLDNVDYILMENVKGFENSTVRNLFIDKLKECNFI 142 (333)
T ss_dssp TTCCEEEECCCCCCSEETTEECCTTCTTSCCHHHHHHHGGGCTTCCEEEEEECTTGGGSHHHHHHHHHHHHTTEE
T ss_pred CCCCEEEecCCCcchhhhhhccCCcCcccccHHHHHHHHHHhcCCCEEEEecchhhhhhhHHHHHHHHHHhCCCe
Confidence 368999865421111 0111111122334445555 75444444554 35777888888863
No 314
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.62 E-value=0.0033 Score=50.08 Aligned_cols=77 Identities=23% Similarity=0.202 Sum_probs=51.5
Q ss_pred CeeEEeccccccccccccCCCCCeeEEEEccccccccC--C--------------HHHHHHHHHHHHhhccCCeEEEEEe
Q 027388 143 PARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWS--T--------------EARARRALANVSALLRPGGTFIGTM 206 (224)
Q Consensus 143 ~v~~~~~d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~--~--------------~~~~~~~l~~~~~~lk~gG~li~~~ 206 (224)
.++++++|+.+... . .+.++||+|+++-.....-. . ...+..++.++.++|+|||.+++..
T Consensus 21 ~~~i~~gD~~~~l~-~--l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~ 97 (297)
T 2zig_A 21 VHRLHVGDAREVLA-S--FPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVV 97 (297)
T ss_dssp CEEEEESCHHHHHT-T--SCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCEEEECcHHHHHh-h--CCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 46899999876321 0 14579999999865421100 0 0124567889999999999999886
Q ss_pred CCh----------------HHHHHHhhhcccc
Q 027388 207 PDA----------------NVIIKKLREEHFC 222 (224)
Q Consensus 207 ~~~----------------~~~~~~~~~~gf~ 222 (224)
.+. ..+...+++.||.
T Consensus 98 ~d~~~~~~~~g~~~~~~~~~~l~~~~~~~Gf~ 129 (297)
T 2zig_A 98 GDVAVARRRFGRHLVFPLHADIQVRCRKLGFD 129 (297)
T ss_dssp CCEEEECC----EEEECHHHHHHHHHHHTTCE
T ss_pred CCCccccccCCcccccccHHHHHHHHHHcCCe
Confidence 642 3577788888873
No 315
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.58 E-value=0.0079 Score=49.28 Aligned_cols=98 Identities=12% Similarity=0.083 Sum_probs=63.2
Q ss_pred hhcCCCeEEEecCCC-chhHHHHHhhcCC-eEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccc--c
Q 027388 81 YARRGDVVLDLACGK-GGDLIKWDKAKIG-YYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH--L 156 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~-G~~~~~l~~~~~~-~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~ 156 (224)
...++.+||-+|+|. |.++.++++.... +++++|.++..++.+++.-. -.++...-.++. .
T Consensus 187 ~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa---------------~~vi~~~~~~~~~~~ 251 (371)
T 1f8f_A 187 KVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGA---------------THVINSKTQDPVAAI 251 (371)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTC---------------SEEEETTTSCHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCC---------------CEEecCCccCHHHHH
Confidence 456789999999876 7777787765444 79999999999999876532 111211111110 0
Q ss_pred ccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 157 DKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 157 ~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
... ..+.+|+|+-.-.. ...+....+.|+++|.+++.
T Consensus 252 ~~~--~~gg~D~vid~~g~----------~~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 252 KEI--TDGGVNFALESTGS----------PEILKQGVDALGILGKIAVV 288 (371)
T ss_dssp HHH--TTSCEEEEEECSCC----------HHHHHHHHHTEEEEEEEEEC
T ss_pred HHh--cCCCCcEEEECCCC----------HHHHHHHHHHHhcCCEEEEe
Confidence 000 12379999854321 23567788999999998864
No 316
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=96.29 E-value=0.011 Score=47.08 Aligned_cols=76 Identities=24% Similarity=0.272 Sum_probs=56.4
Q ss_pred cCCCeEEEecCCCchhHHHHHhhcCCe--EEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccccc
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKAKIGY--YVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~~~~~--~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (224)
....+++|+-||.|.+...+...++.. ++++|+++..++..+.+.. ...++.+|+.++......
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~--------------~~~~~~~DI~~i~~~~i~ 79 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQ--------------GKIMYVGDVRSVTQKHIQ 79 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTT--------------TCEEEECCGGGCCHHHHH
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCC--------------CCceeCCChHHccHHHhc
Confidence 356689999999999998887666655 6899999999988887754 235778888876542221
Q ss_pred CCCCCeeEEEEcc
Q 027388 161 ADDAPFDICSCQF 173 (224)
Q Consensus 161 ~~~~~~D~i~~~~ 173 (224)
..+.+|+++...
T Consensus 80 -~~~~~Dll~ggp 91 (295)
T 2qrv_A 80 -EWGPFDLVIGGS 91 (295)
T ss_dssp -HTCCCSEEEECC
T ss_pred -ccCCcCEEEecC
Confidence 124799999654
No 317
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.22 E-value=0.019 Score=46.36 Aligned_cols=99 Identities=14% Similarity=0.093 Sum_probs=63.9
Q ss_pred hhcCCCeEEEecCCC-chhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccc
Q 027388 81 YARRGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKV 159 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 159 (224)
...++.+||-+|+|. |..+.++++....+++++|.++..++.+++.-. -..+...-.+... ..
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa---------------~~~i~~~~~~~~~-~~ 226 (340)
T 3s2e_A 163 DTRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGA---------------EVAVNARDTDPAA-WL 226 (340)
T ss_dssp TCCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTC---------------SEEEETTTSCHHH-HH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCC---------------CEEEeCCCcCHHH-HH
Confidence 456888999999876 778888887666699999999999998876432 1111111111100 00
Q ss_pred cCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 160 LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 160 ~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
....+.+|+|+..-.. ...+....+.|+++|.+++.
T Consensus 227 ~~~~g~~d~vid~~g~----------~~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 227 QKEIGGAHGVLVTAVS----------PKAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp HHHHSSEEEEEESSCC----------HHHHHHHHHHEEEEEEEEEC
T ss_pred HHhCCCCCEEEEeCCC----------HHHHHHHHHHhccCCEEEEe
Confidence 0012378998754321 23567788899999998864
No 318
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=96.21 E-value=0.042 Score=46.71 Aligned_cols=127 Identities=11% Similarity=0.077 Sum_probs=77.1
Q ss_pred CCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccc-----
Q 027388 85 GDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKV----- 159 (224)
Q Consensus 85 ~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~----- 159 (224)
..+++|+-||.|++...+...++..+.++|+++..++..+.++.. .....++++|+.++.....
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~~~-----------~p~~~~~~~DI~~i~~~~~~~~~~ 156 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYC-----------DPATHHFNEDIRDITLSHQEGVSD 156 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHSCC-----------CTTTCEEESCTHHHHCTTCTTSCH
T ss_pred cceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhccc-----------CCCcceeccchhhhhhccccccch
Confidence 468999999999999988766766688999999999998888631 1124567788876642110
Q ss_pred -------cCCCCCeeEEEEccccccccC-C-----------------HHHHHHHHHHHHhhccCCeEEEEEeCC------
Q 027388 160 -------LADDAPFDICSCQFAMHYSWS-T-----------------EARARRALANVSALLRPGGTFIGTMPD------ 208 (224)
Q Consensus 160 -------~~~~~~~D~i~~~~~l~~~~~-~-----------------~~~~~~~l~~~~~~lk~gG~li~~~~~------ 208 (224)
......+|+++....-+-+.. . ...+-..+.++.+.++|.-+++=.+++
T Consensus 157 ~~~~~~i~~~~~~~Dvl~gGpPCQ~FS~AG~~k~~~~g~~~G~~~D~R~~Lf~e~~riI~~~rPk~fvlENV~gl~s~~~ 236 (482)
T 3me5_A 157 EAAAEHIRQHIPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFDVVRIIDARRPAMFVLENVKNLKSHDK 236 (482)
T ss_dssp HHHHHHHHHHSCCCSEEEEECCCCCC------------------CTTTTSHHHHHHHHHHHHCCSEEEEEEETTTTTGGG
T ss_pred hhHHhhhhhcCCCCCEEEecCCCcchhhhCcccccccccccccccCccccHHHHHHHHHHHcCCcEEEEeCcHHHhcccC
Confidence 001246899986543222200 0 001122233344556786555434543
Q ss_pred ---hHHHHHHhhhcccc
Q 027388 209 ---ANVIIKKLREEHFC 222 (224)
Q Consensus 209 ---~~~~~~~~~~~gf~ 222 (224)
...+...|.+.||.
T Consensus 237 g~~f~~i~~~L~~lGY~ 253 (482)
T 3me5_A 237 GKTFRIIMQTLDELGYD 253 (482)
T ss_dssp GHHHHHHHHHHHHTTEE
T ss_pred CcHHHHHHHHHhcCCcE
Confidence 24567788888863
No 319
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.18 E-value=0.014 Score=46.93 Aligned_cols=47 Identities=11% Similarity=0.212 Sum_probs=40.7
Q ss_pred hhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhcc
Q 027388 81 YARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYN 128 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~ 128 (224)
...++..|||.-||+|..+.... ....+++|+|+++..++.+++++.
T Consensus 249 ~~~~~~~VlDpF~GsGtt~~aa~-~~gr~~ig~e~~~~~~~~~~~r~~ 295 (323)
T 1boo_A 249 LTEPDDLVVDIFGGSNTTGLVAE-RESRKWISFEMKPEYVAASAFRFL 295 (323)
T ss_dssp HCCTTCEEEETTCTTCHHHHHHH-HTTCEEEEEESCHHHHHHHHGGGS
T ss_pred hCCCCCEEEECCCCCCHHHHHHH-HcCCCEEEEeCCHHHHHHHHHHHH
Confidence 35688999999999998887765 445699999999999999999987
No 320
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=96.12 E-value=0.027 Score=50.12 Aligned_cols=132 Identities=15% Similarity=0.203 Sum_probs=77.7
Q ss_pred CCCeEEEecCCCchhHHHHHhhc---------C----CeEEEEeC---ChhHHHHHHHhccCCcc-----ccc-------
Q 027388 84 RGDVVLDLACGKGGDLIKWDKAK---------I----GYYVGIDI---AEGSIEDCRTRYNGDAD-----HHQ------- 135 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~~~---------~----~~~~gvD~---s~~~~~~a~~~~~~~~~-----~~~------- 135 (224)
+.-+|+|+|.|+|...+.+.+.. . -+++.+|. +...+..+-+.+..... ...
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 45689999999999777654421 1 35889998 44444443322221000 000
Q ss_pred -ccccC---CCCeeEEecccccccccccc-CCCCCeeEEEEccccccccCCHHH----HHHHHHHHHhhccCCeEEEEEe
Q 027388 136 -RRKKF---SFPARLICGDCYEVHLDKVL-ADDAPFDICSCQFAMHYSWSTEAR----ARRALANVSALLRPGGTFIGTM 206 (224)
Q Consensus 136 -~~~~~---~~~v~~~~~d~~~~~~~~~~-~~~~~~D~i~~~~~l~~~~~~~~~----~~~~l~~~~~~lk~gG~li~~~ 206 (224)
++..+ ...+++..+|+.+... .+. .....+|.++..... +... ...++..+.+++++||.+.-.+
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~-~~~~~~~~~~da~flD~f~-----p~~np~~w~~~~~~~l~~~~~~g~~~~t~~ 211 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLP-TLDDSLNNQVDAWFLDGFA-----PAKNPDMWNEQLFNAMARMTRPGGTFSTFT 211 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGG-GCCGGGTTCEEEEEECSSC-----C--CCTTCSHHHHHHHHHHEEEEEEEEESC
T ss_pred ceEEEecCCcEEEEEEccCHHHHHh-hcccccCCceeEEEECCCC-----CCCChhhhhHHHHHHHHHHhCCCCEEEecc
Confidence 00001 1245678888765421 110 014689999986521 1111 2678899999999999866433
Q ss_pred CChHHHHHHhhhcccc
Q 027388 207 PDANVIIKKLREEHFC 222 (224)
Q Consensus 207 ~~~~~~~~~~~~~gf~ 222 (224)
-...+.+.+.++||.
T Consensus 212 -~~~~vr~~l~~aGf~ 226 (689)
T 3pvc_A 212 -AAGFVRRGLQQAGFN 226 (689)
T ss_dssp -CCHHHHHHHHHTTCE
T ss_pred -CcHHHHHHHHhCCeE
Confidence 447889999999984
No 321
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.10 E-value=0.044 Score=44.87 Aligned_cols=105 Identities=13% Similarity=0.013 Sum_probs=64.4
Q ss_pred HHhhcCCCeEEEecCCC-chhHHHHHhhcCC-eEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccc
Q 027388 79 QLYARRGDVVLDLACGK-GGDLIKWDKAKIG-YYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHL 156 (224)
Q Consensus 79 ~~~~~~~~~iLDiGcG~-G~~~~~l~~~~~~-~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 156 (224)
.....++.+||=+|+|. |.++.++++.... +++++|.++...+.+++.-. ..-+.+...|+.+...
T Consensus 177 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa------------~~vi~~~~~~~~~~i~ 244 (370)
T 4ej6_A 177 LSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGA------------TATVDPSAGDVVEAIA 244 (370)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTC------------SEEECTTSSCHHHHHH
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC------------CEEECCCCcCHHHHHH
Confidence 34567889999999865 6677777765554 89999999999998877533 1001111111111000
Q ss_pred ccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 157 DKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 157 ~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
.......+.+|+|+-.-.. ...+....+.|++||.+++.
T Consensus 245 ~~~~~~~gg~Dvvid~~G~----------~~~~~~~~~~l~~~G~vv~~ 283 (370)
T 4ej6_A 245 GPVGLVPGGVDVVIECAGV----------AETVKQSTRLAKAGGTVVIL 283 (370)
T ss_dssp STTSSSTTCEEEEEECSCC----------HHHHHHHHHHEEEEEEEEEC
T ss_pred hhhhccCCCCCEEEECCCC----------HHHHHHHHHHhccCCEEEEE
Confidence 0000013489999854221 13567788999999998874
No 322
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=96.08 E-value=0.022 Score=46.31 Aligned_cols=99 Identities=15% Similarity=0.055 Sum_probs=62.7
Q ss_pred HhhcCCCeEEEecCCC-chhHHHHHhhcCC-eEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecc---cccc
Q 027388 80 LYARRGDVVLDLACGK-GGDLIKWDKAKIG-YYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGD---CYEV 154 (224)
Q Consensus 80 ~~~~~~~~iLDiGcG~-G~~~~~l~~~~~~-~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d---~~~~ 154 (224)
....++.+||-+|+|. |.++.++++.... +++++|.++..++.+++.-. . .++..+ ..+.
T Consensus 167 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa------------~---~vi~~~~~~~~~~ 231 (356)
T 1pl8_A 167 GGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGA------------D---LVLQISKESPQEI 231 (356)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC------------S---EEEECSSCCHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCC------------C---EEEcCcccccchH
Confidence 3456889999999875 7777777765555 89999999998888875422 1 111111 0010
Q ss_pred c--cccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 155 H--LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 155 ~--~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
. ..... . ..+|+|+-.-.- ...+....+.|+++|.+++.
T Consensus 232 ~~~i~~~~-~-~g~D~vid~~g~----------~~~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 232 ARKVEGQL-G-CKPEVTIECTGA----------EASIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp HHHHHHHH-T-SCCSEEEECSCC----------HHHHHHHHHHSCTTCEEEEC
T ss_pred HHHHHHHh-C-CCCCEEEECCCC----------hHHHHHHHHHhcCCCEEEEE
Confidence 0 00000 1 579999854321 13466778899999998864
No 323
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.97 E-value=0.036 Score=44.84 Aligned_cols=91 Identities=16% Similarity=0.082 Sum_probs=63.0
Q ss_pred hhcCCCeEEEecCCC-chhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccc
Q 027388 81 YARRGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKV 159 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 159 (224)
...++.+||=+|+|. |.++.++++....+++++|.++..++.+++.-. -.++ .+.. ..
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa---------------~~v~-~~~~--~~--- 231 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGV---------------KHFY-TDPK--QC--- 231 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTC---------------SEEE-SSGG--GC---
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCC---------------Ceec-CCHH--HH---
Confidence 567889999999876 777777877666699999999999998876422 1222 2211 11
Q ss_pred cCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 160 LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 160 ~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
...+|+|+-.-.-. ..+....+.|+++|.+++.
T Consensus 232 ---~~~~D~vid~~g~~----------~~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 232 ---KEELDFIISTIPTH----------YDLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp ---CSCEEEEEECCCSC----------CCHHHHHTTEEEEEEEEEC
T ss_pred ---hcCCCEEEECCCcH----------HHHHHHHHHHhcCCEEEEE
Confidence 23899998543211 1356678899999998874
No 324
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.86 E-value=0.15 Score=35.35 Aligned_cols=112 Identities=13% Similarity=0.069 Sum_probs=67.0
Q ss_pred CCeEEEecCCC-chhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCCC
Q 027388 85 GDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADD 163 (224)
Q Consensus 85 ~~~iLDiGcG~-G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 163 (224)
..+|+=+|||. |......+......++++|.++..++.+++. .+.++.+|..+...-.. ...
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~----------------g~~~i~gd~~~~~~l~~-a~i 69 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRER----------------GVRAVLGNAANEEIMQL-AHL 69 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT----------------TCEEEESCTTSHHHHHH-TTG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHc----------------CCCEEECCCCCHHHHHh-cCc
Confidence 35688888865 4333333334556899999999988877652 25678888765322100 023
Q ss_pred CCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCChHHHHHHhhhccc
Q 027388 164 APFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVIIKKLREEHF 221 (224)
Q Consensus 164 ~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~~~~~~~~~~~gf 221 (224)
..+|++++... . +.....+-...+.+.|+..++....+.. ..+.|++.|.
T Consensus 70 ~~ad~vi~~~~------~-~~~n~~~~~~a~~~~~~~~iiar~~~~~-~~~~l~~~G~ 119 (140)
T 3fwz_A 70 ECAKWLILTIP------N-GYEAGEIVASARAKNPDIEIIARAHYDD-EVAYITERGA 119 (140)
T ss_dssp GGCSEEEECCS------C-HHHHHHHHHHHHHHCSSSEEEEEESSHH-HHHHHHHTTC
T ss_pred ccCCEEEEECC------C-hHHHHHHHHHHHHHCCCCeEEEEECCHH-HHHHHHHCCC
Confidence 57888876532 1 2223333445666778888777665543 4566666663
No 325
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=95.77 E-value=0.028 Score=45.16 Aligned_cols=54 Identities=19% Similarity=0.115 Sum_probs=42.4
Q ss_pred HHHHHHHHhhcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCCh---hHHHHHHHhcc
Q 027388 73 IKSVLVQLYARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAE---GSIEDCRTRYN 128 (224)
Q Consensus 73 ~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~---~~~~~a~~~~~ 128 (224)
++.++.. ...++..|||.-||+|..+..... ...+++|+|+++ ..++.+++++.
T Consensus 232 ~~~~i~~-~~~~~~~vlDpF~GsGtt~~aa~~-~~r~~ig~e~~~~~~~~~~~~~~Rl~ 288 (319)
T 1eg2_A 232 IERLVRA-LSHPGSTVLDFFAGSGVTARVAIQ-EGRNSICTDAAPVFKEYYQKQLTFLQ 288 (319)
T ss_dssp HHHHHHH-HSCTTCEEEETTCTTCHHHHHHHH-HTCEEEEEESSTHHHHHHHHHHHHC-
T ss_pred HHHHHHH-hCCCCCEEEecCCCCCHHHHHHHH-cCCcEEEEECCccHHHHHHHHHHHHH
Confidence 4444433 356889999999999988887654 456999999999 99999999986
No 326
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.71 E-value=0.038 Score=44.79 Aligned_cols=100 Identities=15% Similarity=0.069 Sum_probs=64.0
Q ss_pred HHhhcCCCeEEEecCCC-chhHHHHHhhcCC-eEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEec---cccc
Q 027388 79 QLYARRGDVVLDLACGK-GGDLIKWDKAKIG-YYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICG---DCYE 153 (224)
Q Consensus 79 ~~~~~~~~~iLDiGcG~-G~~~~~l~~~~~~-~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~---d~~~ 153 (224)
.....++.+||=+|+|. |.++.++++.... +|+++|.++..++.+++.-. ..++.. ++.+
T Consensus 161 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa---------------~~vi~~~~~~~~~ 225 (352)
T 3fpc_A 161 LANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGA---------------TDIINYKNGDIVE 225 (352)
T ss_dssp HTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTC---------------CEEECGGGSCHHH
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCC---------------ceEEcCCCcCHHH
Confidence 33567889999999876 6677777766554 89999999999998877533 111111 1111
Q ss_pred cccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 154 VHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 154 ~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
.-. ... ....+|+|+-.-.- ...+....+.|++||.+++.
T Consensus 226 ~v~-~~t-~g~g~D~v~d~~g~----------~~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 226 QIL-KAT-DGKGVDKVVIAGGD----------VHTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp HHH-HHT-TTCCEEEEEECSSC----------TTHHHHHHHHEEEEEEEEEC
T ss_pred HHH-HHc-CCCCCCEEEECCCC----------hHHHHHHHHHHhcCCEEEEe
Confidence 000 000 23479999854321 13567788899999998853
No 327
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.66 E-value=0.054 Score=44.30 Aligned_cols=96 Identities=20% Similarity=0.136 Sum_probs=61.9
Q ss_pred hhcCCCeEEEecCCC-chhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccc
Q 027388 81 YARRGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKV 159 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 159 (224)
...++.+||-+|+|. |.++.++++....+++++|.++..++.+++.-. ..++. ..+......
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa---------------~~vi~--~~~~~~~~~ 253 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGA---------------DEVVN--SRNADEMAA 253 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTC---------------SEEEE--TTCHHHHHT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC---------------cEEec--cccHHHHHH
Confidence 456789999999875 777777776666689999999999998876422 11111 111110000
Q ss_pred cCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 160 LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 160 ~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
....+|+|+..-.-. ..+....+.|+++|.++..
T Consensus 254 --~~~g~Dvvid~~g~~----------~~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 254 --HLKSFDFILNTVAAP----------HNLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp --TTTCEEEEEECCSSC----------CCHHHHHTTEEEEEEEEEC
T ss_pred --hhcCCCEEEECCCCH----------HHHHHHHHHhccCCEEEEe
Confidence 125799998543221 1345677899999988764
No 328
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=95.56 E-value=0.037 Score=49.06 Aligned_cols=137 Identities=15% Similarity=0.124 Sum_probs=77.9
Q ss_pred CCCeEEEecCCCchhHHHHHhhc-----------C--CeEEEEeC---ChhHHHHHHHhccCCccc-----ccccc---c
Q 027388 84 RGDVVLDLACGKGGDLIKWDKAK-----------I--GYYVGIDI---AEGSIEDCRTRYNGDADH-----HQRRK---K 139 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~~~-----------~--~~~~gvD~---s~~~~~~a~~~~~~~~~~-----~~~~~---~ 139 (224)
+.-+|||+|-|+|.+........ . -+++++|. +...+..+-..+...... ..-.. +
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 34589999999999777654421 1 24889998 777666444432210000 00000 0
Q ss_pred --------CCCCeeEEeccccccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCChHH
Q 027388 140 --------FSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANV 211 (224)
Q Consensus 140 --------~~~~v~~~~~d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~~~ 211 (224)
....+++..+|+.+.-..........||+++.....-.. .++-=-..++..+.+++++||.+.-.+ ....
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~-np~~w~~~~~~~l~~~~~~g~~~~t~~-~~~~ 223 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAK-NPDMWTQNLFNAMARLARPGGTLATFT-SAGF 223 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGG-CGGGSCHHHHHHHHHHEEEEEEEEESC-CCHH
T ss_pred ceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcC-ChhhhhHHHHHHHHHHhCCCCEEEecc-CcHH
Confidence 012345666776543211000013679999975521100 000002568899999999999876444 3478
Q ss_pred HHHHhhhcccc
Q 027388 212 IIKKLREEHFC 222 (224)
Q Consensus 212 ~~~~~~~~gf~ 222 (224)
+.+.+.++||.
T Consensus 224 vr~~L~~aGf~ 234 (676)
T 3ps9_A 224 VRRGLQDAGFT 234 (676)
T ss_dssp HHHHHHHHTCE
T ss_pred HHHHHHhCCeE
Confidence 88999999984
No 329
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.52 E-value=0.068 Score=43.47 Aligned_cols=101 Identities=17% Similarity=0.059 Sum_probs=64.2
Q ss_pred HhhcCCCeEEEecCCC-chhHHHHHhhcCCe-EEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEe-----cccc
Q 027388 80 LYARRGDVVLDLACGK-GGDLIKWDKAKIGY-YVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLIC-----GDCY 152 (224)
Q Consensus 80 ~~~~~~~~iLDiGcG~-G~~~~~l~~~~~~~-~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~-----~d~~ 152 (224)
....++.+||=+|+|. |.++.++++....+ ++++|.++..++.+++. . ...+.+.. .++.
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~------------~~~~~~~~~~~~~~~~~ 241 (363)
T 3m6i_A 175 AGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-C------------PEVVTHKVERLSAEESA 241 (363)
T ss_dssp HTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-C------------TTCEEEECCSCCHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-c------------hhcccccccccchHHHH
Confidence 3567888999999866 77777777665554 99999999999999876 3 11122211 1111
Q ss_pred ccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 153 EVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 153 ~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
+.-. .. .....+|+|+-.-.- ...+....+.|++||.+++.
T Consensus 242 ~~v~-~~-t~g~g~Dvvid~~g~----------~~~~~~~~~~l~~~G~iv~~ 282 (363)
T 3m6i_A 242 KKIV-ES-FGGIEPAVALECTGV----------ESSIAAAIWAVKFGGKVFVI 282 (363)
T ss_dssp HHHH-HH-TSSCCCSEEEECSCC----------HHHHHHHHHHSCTTCEEEEC
T ss_pred HHHH-HH-hCCCCCCEEEECCCC----------hHHHHHHHHHhcCCCEEEEE
Confidence 1000 00 024579999854321 13567788899999998874
No 330
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.47 E-value=0.04 Score=40.64 Aligned_cols=97 Identities=22% Similarity=0.212 Sum_probs=58.6
Q ss_pred hhcCCCeEEEecC--CCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccc
Q 027388 81 YARRGDVVLDLAC--GKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK 158 (224)
Q Consensus 81 ~~~~~~~iLDiGc--G~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 158 (224)
...++++||-.|+ |.|..+..++.....+++++|.++...+.+++.-. . .. .|..+.....
T Consensus 35 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~--------------~-~~--~d~~~~~~~~ 97 (198)
T 1pqw_A 35 RLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGV--------------E-YV--GDSRSVDFAD 97 (198)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCC--------------S-EE--EETTCSTHHH
T ss_pred CCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC--------------C-EE--eeCCcHHHHH
Confidence 3467889999995 34556666655555689999999988777654211 1 11 1221111000
Q ss_pred -c--cCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 159 -V--LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 159 -~--~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
. ......+|+++.+-. . ..+....+.|+++|.++..
T Consensus 98 ~~~~~~~~~~~D~vi~~~g------~-----~~~~~~~~~l~~~G~~v~~ 136 (198)
T 1pqw_A 98 EILELTDGYGVDVVLNSLA------G-----EAIQRGVQILAPGGRFIEL 136 (198)
T ss_dssp HHHHHTTTCCEEEEEECCC------T-----HHHHHHHHTEEEEEEEEEC
T ss_pred HHHHHhCCCCCeEEEECCc------h-----HHHHHHHHHhccCCEEEEE
Confidence 0 002246999986532 1 2567788999999998864
No 331
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.43 E-value=0.048 Score=45.03 Aligned_cols=108 Identities=13% Similarity=0.010 Sum_probs=63.8
Q ss_pred hhcCCCeEEEecCCC-chhHHHHHhhcCC-eEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccc-c--
Q 027388 81 YARRGDVVLDLACGK-GGDLIKWDKAKIG-YYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV-H-- 155 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~-G~~~~~l~~~~~~-~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~-~-- 155 (224)
...++.+||-+|+|. |.++.++++.... +++++|.++..++.+++.-. .++...-.+. .
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa----------------~~i~~~~~~~~~~~ 245 (398)
T 2dph_A 182 GVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGF----------------ETIDLRNSAPLRDQ 245 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTC----------------EEEETTSSSCHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCC----------------cEEcCCCcchHHHH
Confidence 456889999999976 7788888765444 89999999999888864311 1221111111 0
Q ss_pred cccccCCCCCeeEEEEccccccccC-C---HHHHHHHHHHHHhhccCCeEEEEE
Q 027388 156 LDKVLADDAPFDICSCQFAMHYSWS-T---EARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 156 ~~~~~~~~~~~D~i~~~~~l~~~~~-~---~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
..... ....+|+|+-.-.-..... . .......+....+.|++||.+++.
T Consensus 246 ~~~~~-~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 246 IDQIL-GKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp HHHHH-SSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECC
T ss_pred HHHHh-CCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEe
Confidence 00000 1237999985432210000 0 000123577888999999998753
No 332
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=95.38 E-value=0.036 Score=46.13 Aligned_cols=46 Identities=11% Similarity=0.060 Sum_probs=39.6
Q ss_pred cCCCeEEEecCCCchhHHHHH-hhc--CCeEEEEeCChhHHHHHHHhcc
Q 027388 83 RRGDVVLDLACGKGGDLIKWD-KAK--IGYYVGIDIAEGSIEDCRTRYN 128 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~-~~~--~~~~~gvD~s~~~~~~a~~~~~ 128 (224)
.++..++|+|++.|.++..++ ... .++|+++|+++...+..++++.
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~ 273 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLR 273 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHH
Confidence 578899999999999998876 333 3699999999999999998876
No 333
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.35 E-value=0.082 Score=42.79 Aligned_cols=99 Identities=15% Similarity=0.078 Sum_probs=62.0
Q ss_pred hhcCCCeEEEecCCC-chhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecc-ccccc--c
Q 027388 81 YARRGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGD-CYEVH--L 156 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d-~~~~~--~ 156 (224)
...++.+||-+|+|. |.++.++++....+++++|.++..++.+++.-. . .++..+ ..+.. .
T Consensus 165 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa------------~---~~~~~~~~~~~~~~i 229 (352)
T 1e3j_A 165 GVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGA------------D---VTLVVDPAKEEESSI 229 (352)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTC------------S---EEEECCTTTSCHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCC------------C---EEEcCcccccHHHHH
Confidence 456889999999865 667777776666679999999999988875422 1 111111 01110 0
Q ss_pred ccccCC---CCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 157 DKVLAD---DAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 157 ~~~~~~---~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
.... . ...+|+|+..-.. ...+....+.|+++|.+++.
T Consensus 230 ~~~~-~~~~g~g~D~vid~~g~----------~~~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 230 IERI-RSAIGDLPNVTIDCSGN----------EKCITIGINITRTGGTLMLV 270 (352)
T ss_dssp HHHH-HHHSSSCCSEEEECSCC----------HHHHHHHHHHSCTTCEEEEC
T ss_pred HHHh-ccccCCCCCEEEECCCC----------HHHHHHHHHHHhcCCEEEEE
Confidence 0000 1 2469999854321 12466778899999998864
No 334
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.34 E-value=0.038 Score=44.42 Aligned_cols=77 Identities=17% Similarity=0.237 Sum_probs=50.5
Q ss_pred CeeEEeccccccccccccCCCCCeeEEEEcccccccc----CC------HHHHHHHHHHHHhhccCCeEEEEEeCCh---
Q 027388 143 PARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSW----ST------EARARRALANVSALLRPGGTFIGTMPDA--- 209 (224)
Q Consensus 143 ~v~~~~~d~~~~~~~~~~~~~~~~D~i~~~~~l~~~~----~~------~~~~~~~l~~~~~~lk~gG~li~~~~~~--- 209 (224)
...++++|..+... .. +.++||+|++.-...... +. ...+...+..+.++|+|||.+++...+.
T Consensus 14 ~~~ii~gD~~~~l~-~l--~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~~~~ 90 (323)
T 1boo_A 14 NGSMYIGDSLELLE-SF--PEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYMK 90 (323)
T ss_dssp SEEEEESCHHHHGG-GS--CSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCEET
T ss_pred CceEEeCcHHHHHh-hC--CCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCEecC
Confidence 46788999765311 11 467899999875432110 00 1356788999999999999999976543
Q ss_pred ----------HHHHHHhhhcccc
Q 027388 210 ----------NVIIKKLREEHFC 222 (224)
Q Consensus 210 ----------~~~~~~~~~~gf~ 222 (224)
..+.+.+++.||.
T Consensus 91 g~~~~~~~~~~~i~~~~~~~Gf~ 113 (323)
T 1boo_A 91 GVPARSIYNFRVLIRMIDEVGFF 113 (323)
T ss_dssp TEEEECCHHHHHHHHHHHTTCCE
T ss_pred CCcccccchHHHHHHHHHhCCCE
Confidence 2344556777763
No 335
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=95.25 E-value=0.032 Score=45.12 Aligned_cols=97 Identities=18% Similarity=0.008 Sum_probs=61.9
Q ss_pred hhcCCCeEEEecCCC-chhHHHHHhhc--CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccc-ccccc
Q 027388 81 YARRGDVVLDLACGK-GGDLIKWDKAK--IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDC-YEVHL 156 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~-G~~~~~l~~~~--~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~-~~~~~ 156 (224)
.. ++.+||-+|+|. |.++.++++.. ..+++++|.++..++.+++.-. -.++...- .+. .
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa---------------~~vi~~~~~~~~-~ 230 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGA---------------DYVSEMKDAESL-I 230 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTC---------------SEEECHHHHHHH-H
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCC---------------CEEeccccchHH-H
Confidence 45 789999999965 66777777665 6789999999999998876432 11111000 000 0
Q ss_pred ccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 157 DKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 157 ~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
.... ....+|+|+-.-.. ...+....+.|+++|.++..
T Consensus 231 ~~~~-~g~g~D~vid~~g~----------~~~~~~~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 231 NKLT-DGLGASIAIDLVGT----------EETTYNLGKLLAQEGAIILV 268 (344)
T ss_dssp HHHH-TTCCEEEEEESSCC----------HHHHHHHHHHEEEEEEEEEC
T ss_pred HHhh-cCCCccEEEECCCC----------hHHHHHHHHHhhcCCEEEEe
Confidence 0000 12479999864321 13567788899999998764
No 336
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.09 E-value=0.058 Score=43.97 Aligned_cols=98 Identities=13% Similarity=-0.052 Sum_probs=62.9
Q ss_pred hhcCCCeEEEecCCC-chhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccc--cc
Q 027388 81 YARRGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH--LD 157 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~ 157 (224)
...++.+||=+|+|. |..+..+++....+++++|.++..++.+++.-. -.++..+-.++. ..
T Consensus 186 ~~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa---------------~~vi~~~~~~~~~~v~ 250 (363)
T 3uog_A 186 HLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGA---------------DHGINRLEEDWVERVY 250 (363)
T ss_dssp CCCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTC---------------SEEEETTTSCHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCC---------------CEEEcCCcccHHHHHH
Confidence 456789999999775 667777777666799999999999998876532 112221111110 00
Q ss_pred cccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 158 KVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 158 ~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
... ....+|+|+-.-.- ..+....+.|+++|.+++.
T Consensus 251 ~~~-~g~g~D~vid~~g~-----------~~~~~~~~~l~~~G~iv~~ 286 (363)
T 3uog_A 251 ALT-GDRGADHILEIAGG-----------AGLGQSLKAVAPDGRISVI 286 (363)
T ss_dssp HHH-TTCCEEEEEEETTS-----------SCHHHHHHHEEEEEEEEEE
T ss_pred HHh-CCCCceEEEECCCh-----------HHHHHHHHHhhcCCEEEEE
Confidence 000 23479999864321 1356678899999998864
No 337
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=95.07 E-value=0.065 Score=43.06 Aligned_cols=98 Identities=13% Similarity=0.027 Sum_probs=61.8
Q ss_pred hhcCCCeEEEecC--CCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccc--c
Q 027388 81 YARRGDVVLDLAC--GKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH--L 156 (224)
Q Consensus 81 ~~~~~~~iLDiGc--G~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~ 156 (224)
...++++||-.|+ |.|..+..++.....++++++.++..++.+.+.+. . ...+...-.++. .
T Consensus 146 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g-------------~-~~~~~~~~~~~~~~~ 211 (336)
T 4b7c_A 146 QPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELG-------------F-DGAIDYKNEDLAAGL 211 (336)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC-------------C-SEEEETTTSCHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC-------------C-CEEEECCCHHHHHHH
Confidence 4578899999998 34667777776666699999999988888843332 0 111111111110 0
Q ss_pred ccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 157 DKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 157 ~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
... ..+.+|+++.+-. . ..+....+.|+++|.+++.
T Consensus 212 ~~~--~~~~~d~vi~~~g-------~----~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 212 KRE--CPKGIDVFFDNVG-------G----EILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp HHH--CTTCEEEEEESSC-------H----HHHHHHHTTEEEEEEEEEC
T ss_pred HHh--cCCCceEEEECCC-------c----chHHHHHHHHhhCCEEEEE
Confidence 000 1357999986432 1 2577888999999998864
No 338
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=94.95 E-value=0.028 Score=46.38 Aligned_cols=108 Identities=10% Similarity=0.045 Sum_probs=64.2
Q ss_pred hhcCCCeEEEecCCC-chhHHHHHhhcCC-eEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccc-cc--
Q 027388 81 YARRGDVVLDLACGK-GGDLIKWDKAKIG-YYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYE-VH-- 155 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~-G~~~~~l~~~~~~-~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~-~~-- 155 (224)
...++.+||-+|+|. |.++.++++.... .++++|.++..++.+++.-. ..+...-.+ +.
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa----------------~~i~~~~~~~~~~~ 245 (398)
T 1kol_A 182 GVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGF----------------EIADLSLDTPLHEQ 245 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC----------------EEEETTSSSCHHHH
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCC----------------cEEccCCcchHHHH
Confidence 456789999999876 7778888766554 79999999999999875422 112111000 00
Q ss_pred cccccCCCCCeeEEEEcccccccc-----CCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 156 LDKVLADDAPFDICSCQFAMHYSW-----STEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 156 ~~~~~~~~~~~D~i~~~~~l~~~~-----~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
..... ....+|+|+-.-.-.... ....+....+....+.|++||.+++.
T Consensus 246 v~~~t-~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 246 IAALL-GEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp HHHHH-SSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEEC
T ss_pred HHHHh-CCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEe
Confidence 00000 124799998543211000 00011234677888999999998764
No 339
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.94 E-value=0.15 Score=42.08 Aligned_cols=46 Identities=20% Similarity=0.031 Sum_probs=36.1
Q ss_pred hcCCCeEEEecCCC-chhHHHHHhhcCC-eEEEEeCChhHHHHHHHhc
Q 027388 82 ARRGDVVLDLACGK-GGDLIKWDKAKIG-YYVGIDIAEGSIEDCRTRY 127 (224)
Q Consensus 82 ~~~~~~iLDiGcG~-G~~~~~l~~~~~~-~~~gvD~s~~~~~~a~~~~ 127 (224)
..++.+||=+|+|. |.++.++++.... +++++|.++..++.+++.-
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lG 258 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELG 258 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcC
Confidence 45788999999865 6677777765555 8999999999999987653
No 340
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=94.88 E-value=0.11 Score=42.51 Aligned_cols=98 Identities=11% Similarity=0.009 Sum_probs=61.5
Q ss_pred hhcCCCeEEEecCCC-chhHHHHHhhcCC-eEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecc-c-cccc-
Q 027388 81 YARRGDVVLDLACGK-GGDLIKWDKAKIG-YYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGD-C-YEVH- 155 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~-G~~~~~l~~~~~~-~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d-~-~~~~- 155 (224)
...++.+||=+|+|. |.++.++++.... +++++|.++..++.+++.-. -.++... . .++.
T Consensus 188 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa---------------~~vi~~~~~~~~~~~ 252 (373)
T 1p0f_A 188 KVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGA---------------TECLNPKDYDKPIYE 252 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTC---------------SEEECGGGCSSCHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCC---------------cEEEecccccchHHH
Confidence 456788999999865 6677777765444 79999999999998875422 1111111 0 0010
Q ss_pred -cccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCC-eEEEEE
Q 027388 156 -LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPG-GTFIGT 205 (224)
Q Consensus 156 -~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~g-G~li~~ 205 (224)
.... ..+.+|+|+-.-.- ...+....+.|+++ |.+++.
T Consensus 253 ~i~~~--t~gg~Dvvid~~g~----------~~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 253 VICEK--TNGGVDYAVECAGR----------IETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp HHHHH--TTSCBSEEEECSCC----------HHHHHHHHHTBCTTTCEEEEC
T ss_pred HHHHH--hCCCCCEEEECCCC----------HHHHHHHHHHHhcCCCEEEEE
Confidence 0000 12479999854321 13567788999999 988764
No 341
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=94.87 E-value=0.088 Score=43.10 Aligned_cols=98 Identities=15% Similarity=0.109 Sum_probs=61.5
Q ss_pred hhcCCCeEEEecCCC-chhHHHHHhhcCC-eEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecc--ccccc-
Q 027388 81 YARRGDVVLDLACGK-GGDLIKWDKAKIG-YYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGD--CYEVH- 155 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~-G~~~~~l~~~~~~-~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d--~~~~~- 155 (224)
...++.+||=+|+|. |.++.++++.... +|+++|.++..++.+++.-. -.++... -.++.
T Consensus 190 ~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa---------------~~vi~~~~~~~~~~~ 254 (378)
T 3uko_A 190 KVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGV---------------NEFVNPKDHDKPIQE 254 (378)
T ss_dssp CCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTC---------------CEEECGGGCSSCHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCC---------------cEEEccccCchhHHH
Confidence 456788999999864 6677777765444 89999999999998875422 1111111 00100
Q ss_pred -cccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCC-eEEEEE
Q 027388 156 -LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPG-GTFIGT 205 (224)
Q Consensus 156 -~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~g-G~li~~ 205 (224)
.... ..+.+|+|+-.-.- ...+....+.|++| |.+++.
T Consensus 255 ~i~~~--~~gg~D~vid~~g~----------~~~~~~~~~~l~~g~G~iv~~ 294 (378)
T 3uko_A 255 VIVDL--TDGGVDYSFECIGN----------VSVMRAALECCHKGWGTSVIV 294 (378)
T ss_dssp HHHHH--TTSCBSEEEECSCC----------HHHHHHHHHTBCTTTCEEEEC
T ss_pred HHHHh--cCCCCCEEEECCCC----------HHHHHHHHHHhhccCCEEEEE
Confidence 0000 12489999854321 23567788999996 988764
No 342
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=94.83 E-value=0.099 Score=42.69 Aligned_cols=98 Identities=11% Similarity=0.090 Sum_probs=61.4
Q ss_pred hhcCCCeEEEecCCC-chhHHHHHhhcCC-eEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecc-c-cccc-
Q 027388 81 YARRGDVVLDLACGK-GGDLIKWDKAKIG-YYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGD-C-YEVH- 155 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~-G~~~~~l~~~~~~-~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d-~-~~~~- 155 (224)
...++.+||-+|+|. |.++.++++.... +++++|.++..++.+++.-. -.++... . .++.
T Consensus 189 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa---------------~~vi~~~~~~~~~~~ 253 (374)
T 1cdo_A 189 KVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGA---------------TDFVNPNDHSEPISQ 253 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC---------------CEEECGGGCSSCHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCC---------------ceEEeccccchhHHH
Confidence 456788999999865 6677777765555 79999999999998875422 1111111 0 0010
Q ss_pred -cccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCC-eEEEEE
Q 027388 156 -LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPG-GTFIGT 205 (224)
Q Consensus 156 -~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~g-G~li~~ 205 (224)
.... ..+.+|+|+-.-.- ...+....+.|+++ |.+++.
T Consensus 254 ~~~~~--~~~g~D~vid~~g~----------~~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 254 VLSKM--TNGGVDFSLECVGN----------VGVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp HHHHH--HTSCBSEEEECSCC----------HHHHHHHHHTBCTTTCEEEEC
T ss_pred HHHHH--hCCCCCEEEECCCC----------HHHHHHHHHHhhcCCcEEEEE
Confidence 0000 12479999854321 13567788999999 988764
No 343
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=94.82 E-value=0.12 Score=42.16 Aligned_cols=98 Identities=15% Similarity=0.123 Sum_probs=61.5
Q ss_pred hhcCCCeEEEecCCC-chhHHHHHhhcCC-eEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecc-c-cccc-
Q 027388 81 YARRGDVVLDLACGK-GGDLIKWDKAKIG-YYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGD-C-YEVH- 155 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~-G~~~~~l~~~~~~-~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d-~-~~~~- 155 (224)
...++.+||=+|+|. |.++.++++.... +++++|.++..++.+++.-. -.++... . .++.
T Consensus 187 ~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa---------------~~vi~~~~~~~~~~~ 251 (373)
T 2fzw_A 187 KLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGA---------------TECINPQDFSKPIQE 251 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTC---------------SEEECGGGCSSCHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCC---------------ceEeccccccccHHH
Confidence 456788999999865 6677777765554 79999999999999876432 1111111 0 0010
Q ss_pred -cccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCC-eEEEEE
Q 027388 156 -LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPG-GTFIGT 205 (224)
Q Consensus 156 -~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~g-G~li~~ 205 (224)
.... ..+.+|+|+-.-.- ...+....+.|+++ |.+++.
T Consensus 252 ~v~~~--~~~g~D~vid~~g~----------~~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 252 VLIEM--TDGGVDYSFECIGN----------VKVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp HHHHH--TTSCBSEEEECSCC----------HHHHHHHHHTBCTTTCEEEEC
T ss_pred HHHHH--hCCCCCEEEECCCc----------HHHHHHHHHhhccCCcEEEEE
Confidence 0000 12479999854321 13567788999999 998764
No 344
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=94.82 E-value=0.13 Score=41.98 Aligned_cols=98 Identities=12% Similarity=0.122 Sum_probs=61.2
Q ss_pred hhcCCCeEEEecCCC-chhHHHHHhhcCC-eEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccc--cccc-
Q 027388 81 YARRGDVVLDLACGK-GGDLIKWDKAKIG-YYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDC--YEVH- 155 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~-G~~~~~l~~~~~~-~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~--~~~~- 155 (224)
...++.+||-+|+|. |.++.++++.... +++++|.++..++.+++.-. -.++...- .++.
T Consensus 188 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa---------------~~vi~~~~~~~~~~~ 252 (374)
T 2jhf_A 188 KVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGA---------------TECVNPQDYKKPIQE 252 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC---------------SEEECGGGCSSCHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC---------------ceEecccccchhHHH
Confidence 456788999999865 6677777765555 79999999999998875422 11111110 0010
Q ss_pred -cccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCC-eEEEEE
Q 027388 156 -LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPG-GTFIGT 205 (224)
Q Consensus 156 -~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~g-G~li~~ 205 (224)
.... ..+.+|+|+-.-.- ...+....+.|+++ |.+++.
T Consensus 253 ~~~~~--~~~g~D~vid~~g~----------~~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 253 VLTEM--SNGGVDFSFEVIGR----------LDTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp HHHHH--TTSCBSEEEECSCC----------HHHHHHHHHHBCTTTCEEEEC
T ss_pred HHHHH--hCCCCcEEEECCCC----------HHHHHHHHHHhhcCCcEEEEe
Confidence 0000 12479999854321 13567788899999 988764
No 345
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=94.80 E-value=0.23 Score=45.91 Aligned_cols=125 Identities=12% Similarity=0.120 Sum_probs=75.9
Q ss_pred CCCeEEEecCCCchhHHHHHhhcC-CeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccc-------
Q 027388 84 RGDVVLDLACGKGGDLIKWDKAKI-GYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH------- 155 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~~~~-~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~------- 155 (224)
...+++|+-||.|++...+...++ ..+.++|+++.+++..+.++. ...++..|+..+.
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~p--------------~~~~~~~DI~~l~~~~~~~d 604 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNP--------------GSTVFTEDCNILLKLVMAGE 604 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHCT--------------TSEEECSCHHHHHHHHHHTC
T ss_pred CCCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC--------------CCccccccHHHHhhhccchh
Confidence 345799999999999998876665 467799999999999888865 2345555543221
Q ss_pred ----cccccCCCCCeeEEEEccccccccC-C---H---HH----HHHHHHHHHhhccCCeEEEEEeCC---------hHH
Q 027388 156 ----LDKVLADDAPFDICSCQFAMHYSWS-T---E---AR----ARRALANVSALLRPGGTFIGTMPD---------ANV 211 (224)
Q Consensus 156 ----~~~~~~~~~~~D~i~~~~~l~~~~~-~---~---~~----~~~~l~~~~~~lk~gG~li~~~~~---------~~~ 211 (224)
........+.+|+|+....-+.+.. . . .+ +...+.++.+.++|.-+|+=.+++ ...
T Consensus 605 i~~~~~~~lp~~~~vDll~GGpPCQ~FS~ag~~~~~~~~d~R~~L~~~~~riv~~~rPk~~llENV~glls~~~~~~~~~ 684 (1002)
T 3swr_A 605 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKL 684 (1002)
T ss_dssp SBCTTCCBCCCTTTCSEEEECCCCTTCCSSSCCCHHHHHHHTTSHHHHHHHHHHHHCCSEEEEEEEGGGGTTGGGHHHHH
T ss_pred hhhhhhhhcccCCCeeEEEEcCCCcchhhhCCCCCCcccchhhHHHHHHHHHHHHhCCCEEEEeccHHHhccCcchHHHH
Confidence 0000112357999996542222100 0 0 11 112234555667887665545543 245
Q ss_pred HHHHhhhcccc
Q 027388 212 IIKKLREEHFC 222 (224)
Q Consensus 212 ~~~~~~~~gf~ 222 (224)
++..|.+.||.
T Consensus 685 i~~~L~~lGY~ 695 (1002)
T 3swr_A 685 TLRCLVRMGYQ 695 (1002)
T ss_dssp HHHHHHHHTCE
T ss_pred HHHHHHhcCCe
Confidence 67777888873
No 346
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=94.78 E-value=0.15 Score=41.07 Aligned_cols=98 Identities=16% Similarity=0.146 Sum_probs=61.5
Q ss_pred hhcCCCeEEEecCCC-chhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccc
Q 027388 81 YARRGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKV 159 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 159 (224)
...++.+||-+|+|. |..+..+++....+++++|.++..++.+++.-. ..+ .|..+......
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa---------------~~~--~d~~~~~~~~~ 223 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGA---------------DLV--VNPLKEDAAKF 223 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTC---------------SEE--ECTTTSCHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCC---------------CEE--ecCCCccHHHH
Confidence 456789999999854 667777776666699999999999888865321 011 12221111000
Q ss_pred c-CCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 160 L-ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 160 ~-~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
. ...+.+|+|+..-.. ...+....+.|+++|.+++.
T Consensus 224 ~~~~~~~~d~vid~~g~----------~~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 224 MKEKVGGVHAAVVTAVS----------KPAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp HHHHHSSEEEEEESSCC----------HHHHHHHHHHEEEEEEEEEC
T ss_pred HHHHhCCCCEEEECCCC----------HHHHHHHHHHhhcCCEEEEe
Confidence 0 001479999864321 13567788899999988764
No 347
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=94.75 E-value=0.078 Score=42.72 Aligned_cols=98 Identities=17% Similarity=0.176 Sum_probs=60.7
Q ss_pred hhcCCCeEEEecCCC--chhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccc--c
Q 027388 81 YARRGDVVLDLACGK--GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH--L 156 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~--G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~ 156 (224)
...++.+||=+|+|+ |..+..+++....+++++|.++..++.+++.-. -..+...-.++. .
T Consensus 141 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga---------------~~~~~~~~~~~~~~~ 205 (340)
T 3gms_A 141 NLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGA---------------AYVIDTSTAPLYETV 205 (340)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTC---------------SEEEETTTSCHHHHH
T ss_pred ccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCC---------------cEEEeCCcccHHHHH
Confidence 456789999999974 667777776666699999999999998876432 111111111110 0
Q ss_pred ccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 157 DKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 157 ~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
... .....+|+|+.+-.- ... ....+.|+++|.+++.
T Consensus 206 ~~~-~~~~g~Dvvid~~g~-------~~~----~~~~~~l~~~G~iv~~ 242 (340)
T 3gms_A 206 MEL-TNGIGADAAIDSIGG-------PDG----NELAFSLRPNGHFLTI 242 (340)
T ss_dssp HHH-TTTSCEEEEEESSCH-------HHH----HHHHHTEEEEEEEEEC
T ss_pred HHH-hCCCCCcEEEECCCC-------hhH----HHHHHHhcCCCEEEEE
Confidence 000 023579999864321 221 2344789999998864
No 348
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=94.74 E-value=0.092 Score=42.66 Aligned_cols=98 Identities=16% Similarity=0.054 Sum_probs=60.7
Q ss_pred hhcCCCeEEEecCCC-chhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccc-cccc
Q 027388 81 YARRGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV-HLDK 158 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~~~ 158 (224)
...++.+||-+|+|. |.++..+++....+++++|.++..++.+++.-. -.++. ..+. ....
T Consensus 176 ~~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa---------------~~v~~--~~~~~~~~~ 238 (360)
T 1piw_A 176 GCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGA---------------DHYIA--TLEEGDWGE 238 (360)
T ss_dssp TCSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTC---------------SEEEE--GGGTSCHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCC---------------CEEEc--CcCchHHHH
Confidence 456789999999854 667777776555689999999999998876422 11121 1111 1100
Q ss_pred ccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 159 VLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 159 ~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
.. .+.+|+|+..-.-. . ...+....+.|+++|.++..
T Consensus 239 ~~--~~~~D~vid~~g~~----~----~~~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 239 KY--FDTFDLIVVCASSL----T----DIDFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp HS--CSCEEEEEECCSCS----T----TCCTTTGGGGEEEEEEEEEC
T ss_pred Hh--hcCCCEEEECCCCC----c----HHHHHHHHHHhcCCCEEEEe
Confidence 11 15799998643220 0 01234567889999988753
No 349
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=94.69 E-value=0.08 Score=42.72 Aligned_cols=98 Identities=8% Similarity=0.056 Sum_probs=63.6
Q ss_pred hhcCCCeEEEecCCC-chhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEec--ccccccc
Q 027388 81 YARRGDVVLDLACGK-GGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICG--DCYEVHL 156 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~-G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~--d~~~~~~ 156 (224)
...++.+||=+|+|. |.++.++++.. ..+++++|.++..++.+++.-. ..++.. +..+.-.
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa---------------~~~i~~~~~~~~~v~ 232 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGA---------------DAAVKSGAGAADAIR 232 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTC---------------SEEEECSTTHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCC---------------CEEEcCCCcHHHHHH
Confidence 456789999999866 77777777654 6799999999999999876533 111111 1111000
Q ss_pred ccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 157 DKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 157 ~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
... ....+|+|+-.-.- ...+....+.|+++|.+++.
T Consensus 233 -~~t-~g~g~d~v~d~~G~----------~~~~~~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 233 -ELT-GGQGATAVFDFVGA----------QSTIDTAQQVVAVDGHISVV 269 (345)
T ss_dssp -HHH-GGGCEEEEEESSCC----------HHHHHHHHHHEEEEEEEEEC
T ss_pred -HHh-CCCCCeEEEECCCC----------HHHHHHHHHHHhcCCEEEEE
Confidence 000 12479999854321 23667788999999998864
No 350
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=94.57 E-value=0.21 Score=40.62 Aligned_cols=97 Identities=16% Similarity=0.043 Sum_probs=62.0
Q ss_pred hhcCCCeEEEec--CCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccc--c
Q 027388 81 YARRGDVVLDLA--CGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH--L 156 (224)
Q Consensus 81 ~~~~~~~iLDiG--cG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~ 156 (224)
...++.+||=+| .|.|..+..+++....++++++.++..++.+++.-. -.++..+-.++. .
T Consensus 160 ~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga---------------~~~~~~~~~~~~~~~ 224 (362)
T 2c0c_A 160 GLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGC---------------DRPINYKTEPVGTVL 224 (362)
T ss_dssp CCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC---------------SEEEETTTSCHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCC---------------cEEEecCChhHHHHH
Confidence 456788999999 355778888877666689999999988888875322 111111111110 0
Q ss_pred ccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 157 DKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 157 ~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
... ....+|+|+..-. . ..+..+.+.|+++|.+++.
T Consensus 225 ~~~--~~~g~D~vid~~g------~-----~~~~~~~~~l~~~G~iv~~ 260 (362)
T 2c0c_A 225 KQE--YPEGVDVVYESVG------G-----AMFDLAVDALATKGRLIVI 260 (362)
T ss_dssp HHH--CTTCEEEEEECSC------T-----HHHHHHHHHEEEEEEEEEC
T ss_pred HHh--cCCCCCEEEECCC------H-----HHHHHHHHHHhcCCEEEEE
Confidence 000 1257999986432 1 3567788999999988764
No 351
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=94.55 E-value=0.11 Score=41.75 Aligned_cols=97 Identities=19% Similarity=0.077 Sum_probs=59.7
Q ss_pred hhcCCCeEEEecC--CCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccc-cccc
Q 027388 81 YARRGDVVLDLAC--GKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYE-VHLD 157 (224)
Q Consensus 81 ~~~~~~~iLDiGc--G~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~ 157 (224)
...++++||-.|+ |.|..+..++.....+++++|.++..++.+++.-. .. ..|..+ ....
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~--------------~~---~~d~~~~~~~~ 204 (333)
T 1v3u_A 142 GVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGF--------------DA---AFNYKTVNSLE 204 (333)
T ss_dssp CCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC--------------SE---EEETTSCSCHH
T ss_pred CCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCC--------------cE---EEecCCHHHHH
Confidence 4567889999998 44556666665566699999999988888743211 01 112221 1100
Q ss_pred ccc--CCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 158 KVL--ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 158 ~~~--~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
... ...+.+|+++.+-. . ..+....+.|++||.+++.
T Consensus 205 ~~~~~~~~~~~d~vi~~~g-------~----~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 205 EALKKASPDGYDCYFDNVG-------G----EFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp HHHHHHCTTCEEEEEESSC-------H----HHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHHhCCCCeEEEECCC-------h----HHHHHHHHHHhcCCEEEEE
Confidence 000 01257999986542 1 2367788999999998763
No 352
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=94.39 E-value=0.46 Score=42.82 Aligned_cols=45 Identities=18% Similarity=0.138 Sum_probs=37.3
Q ss_pred CCCeEEEecCCCchhHHHHHhhc------CCeEEEEeCChhHHHHHHHhcc
Q 027388 84 RGDVVLDLACGKGGDLIKWDKAK------IGYYVGIDIAEGSIEDCRTRYN 128 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~~~------~~~~~gvD~s~~~~~~a~~~~~ 128 (224)
+..+|||+-||.|++..-+...+ +..+.++|+++.+++.-+.++.
T Consensus 211 k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp 261 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHP 261 (784)
T ss_dssp EEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHCT
T ss_pred CCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHCC
Confidence 44689999999999988876543 4567799999999999998865
No 353
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=94.38 E-value=0.11 Score=42.77 Aligned_cols=57 Identities=14% Similarity=0.074 Sum_probs=39.4
Q ss_pred HHHHHHHHHhhcCCCeEEEecCCCchhHHHHHhh--------cCCeEEEEeCChhHHHHHHHhcc
Q 027388 72 WIKSVLVQLYARRGDVVLDLACGKGGDLIKWDKA--------KIGYYVGIDIAEGSIEDCRTRYN 128 (224)
Q Consensus 72 ~~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~--------~~~~~~gvD~s~~~~~~a~~~~~ 128 (224)
|+......+....+..|+|+|+|+|.++..++.. ...+|+.||+|+...+.-++.+.
T Consensus 68 ~~~~~w~~~g~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 132 (387)
T 1zkd_A 68 WSASVWKAADEPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLA 132 (387)
T ss_dssp HHHHHHHHTTCCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHST
T ss_pred HHHHHHHHcCCCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhc
Confidence 3333333333334457999999999998877642 22379999999988887777665
No 354
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=94.35 E-value=0.11 Score=42.00 Aligned_cols=97 Identities=15% Similarity=0.100 Sum_probs=62.0
Q ss_pred hhcCCCeEEEecC--CCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccc--
Q 027388 81 YARRGDVVLDLAC--GKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHL-- 156 (224)
Q Consensus 81 ~~~~~~~iLDiGc--G~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-- 156 (224)
...++.+||=+|+ |.|..+..+++....++++++.++..++.+++.-. -.++..+ .++..
T Consensus 156 ~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga---------------~~v~~~~-~~~~~~v 219 (342)
T 4eye_A 156 QLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGA---------------DIVLPLE-EGWAKAV 219 (342)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTC---------------SEEEESS-TTHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC---------------cEEecCc-hhHHHHH
Confidence 3467889999997 34667777777666799999999999988876532 1122111 11110
Q ss_pred ccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 157 DKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 157 ~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
.... ....+|+|+..-.- ..+....+.|+++|.+++.
T Consensus 220 ~~~~-~~~g~Dvvid~~g~-----------~~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 220 REAT-GGAGVDMVVDPIGG-----------PAFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp HHHT-TTSCEEEEEESCC-------------CHHHHHHTEEEEEEEEEC
T ss_pred HHHh-CCCCceEEEECCch-----------hHHHHHHHhhcCCCEEEEE
Confidence 0000 23479999864321 1456788899999998864
No 355
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=94.32 E-value=0.13 Score=41.61 Aligned_cols=97 Identities=14% Similarity=0.191 Sum_probs=60.9
Q ss_pred hhcCCCeEEEecCCC--chhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccc--
Q 027388 81 YARRGDVVLDLACGK--GGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH-- 155 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~--G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~-- 155 (224)
...++.+||-.|+|+ |..+..++... ..+++++|.++..++.+++.-. . .++ |..+..
T Consensus 167 ~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~--------------~-~~~--~~~~~~~~ 229 (347)
T 1jvb_A 167 SLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGA--------------D-YVI--NASMQDPL 229 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTC--------------S-EEE--ETTTSCHH
T ss_pred CCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC--------------C-EEe--cCCCccHH
Confidence 456789999999983 55666666555 6689999999988888865422 0 111 111111
Q ss_pred --cccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 156 --LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 156 --~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
..... ..+.+|+++..-.- ...+....+.|+++|.+++.
T Consensus 230 ~~~~~~~-~~~~~d~vi~~~g~----------~~~~~~~~~~l~~~G~iv~~ 270 (347)
T 1jvb_A 230 AEIRRIT-ESKGVDAVIDLNNS----------EKTLSVYPKALAKQGKYVMV 270 (347)
T ss_dssp HHHHHHT-TTSCEEEEEESCCC----------HHHHTTGGGGEEEEEEEEEC
T ss_pred HHHHHHh-cCCCceEEEECCCC----------HHHHHHHHHHHhcCCEEEEE
Confidence 00000 11579999865321 13567788899999988763
No 356
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=94.30 E-value=0.1 Score=42.20 Aligned_cols=98 Identities=21% Similarity=0.131 Sum_probs=60.9
Q ss_pred hhcCCCeEEEecC--CCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccc-cccc
Q 027388 81 YARRGDVVLDLAC--GKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYE-VHLD 157 (224)
Q Consensus 81 ~~~~~~~iLDiGc--G~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~ 157 (224)
...++++||-+|+ |.|..+..++.....+++++|.++...+.+++.-. . ..+ |..+ ....
T Consensus 166 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~--------------~-~~~--d~~~~~~~~ 228 (347)
T 2hcy_A 166 NLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGG--------------E-VFI--DFTKEKDIV 228 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTC--------------C-EEE--ETTTCSCHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCC--------------c-eEE--ecCccHhHH
Confidence 4567899999998 34666667666556699999999888877765311 0 111 2221 0000
Q ss_pred ccc--CCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 158 KVL--ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 158 ~~~--~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
... ...+.+|+++.+-.. ...+..+.+.|+++|.+++.
T Consensus 229 ~~~~~~~~~~~D~vi~~~g~----------~~~~~~~~~~l~~~G~iv~~ 268 (347)
T 2hcy_A 229 GAVLKATDGGAHGVINVSVS----------EAAIEASTRYVRANGTTVLV 268 (347)
T ss_dssp HHHHHHHTSCEEEEEECSSC----------HHHHHHHTTSEEEEEEEEEC
T ss_pred HHHHHHhCCCCCEEEECCCc----------HHHHHHHHHHHhcCCEEEEE
Confidence 000 001279999865431 13567788999999988764
No 357
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=94.25 E-value=0.18 Score=41.08 Aligned_cols=96 Identities=10% Similarity=0.056 Sum_probs=60.4
Q ss_pred CCCeEEEec-CCC-chhHHHHHhh-cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccccc
Q 027388 84 RGDVVLDLA-CGK-GGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (224)
Q Consensus 84 ~~~~iLDiG-cG~-G~~~~~l~~~-~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (224)
++.+||=+| +|. |.++.++++. ...++++++.++..++.+++.-. -.++... .++......
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGa---------------d~vi~~~-~~~~~~v~~ 234 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGA---------------HHVIDHS-KPLAAEVAA 234 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTC---------------SEEECTT-SCHHHHHHT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCC---------------CEEEeCC-CCHHHHHHH
Confidence 577899888 443 7788888875 57799999999999988876422 1111110 011000000
Q ss_pred CCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
...+.+|+|+-.-. -...+..+.+.|+++|.+++.
T Consensus 235 ~~~~g~Dvvid~~g----------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 235 LGLGAPAFVFSTTH----------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp TCSCCEEEEEECSC----------HHHHHHHHHHHSCTTCEEEEC
T ss_pred hcCCCceEEEECCC----------chhhHHHHHHHhcCCCEEEEE
Confidence 02468999985422 124567788999999998864
No 358
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=94.25 E-value=0.16 Score=41.44 Aligned_cols=97 Identities=13% Similarity=0.058 Sum_probs=61.1
Q ss_pred hhcCCCeEEEecCCC-chhHHHHHhhcCC-eEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEec-----cccc
Q 027388 81 YARRGDVVLDLACGK-GGDLIKWDKAKIG-YYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICG-----DCYE 153 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~-G~~~~~l~~~~~~-~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~-----d~~~ 153 (224)
...++.+||=+|+|. |.++.++++.... +++++|.++..++.+++.-. -.++.. ++.+
T Consensus 192 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa---------------~~vi~~~~~~~~~~~ 256 (376)
T 1e3i_A 192 KVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGA---------------TDCLNPRELDKPVQD 256 (376)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC---------------SEEECGGGCSSCHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC---------------cEEEccccccchHHH
Confidence 456788999999865 6677777766555 79999999999998875422 111111 1110
Q ss_pred cccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCC-eEEEEE
Q 027388 154 VHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPG-GTFIGT 205 (224)
Q Consensus 154 ~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~g-G~li~~ 205 (224)
. .... ..+.+|+|+-.-.- ...+....+.|+++ |.+++.
T Consensus 257 ~-v~~~--~~~g~Dvvid~~G~----------~~~~~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 257 V-ITEL--TAGGVDYSLDCAGT----------AQTLKAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp H-HHHH--HTSCBSEEEESSCC----------HHHHHHHHHTBCTTTCEEEEC
T ss_pred H-HHHH--hCCCccEEEECCCC----------HHHHHHHHHHhhcCCCEEEEE
Confidence 0 0000 12479999854321 23567788999999 988763
No 359
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=94.23 E-value=0.11 Score=42.65 Aligned_cols=98 Identities=16% Similarity=0.045 Sum_probs=60.8
Q ss_pred hcCCCeEEEecCCC-chhHHHHHhhcC-CeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecc---ccccc-
Q 027388 82 ARRGDVVLDLACGK-GGDLIKWDKAKI-GYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGD---CYEVH- 155 (224)
Q Consensus 82 ~~~~~~iLDiGcG~-G~~~~~l~~~~~-~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d---~~~~~- 155 (224)
..++.+||-+|+|. |.++.++++... .++++++.++..++.+++.-. -.++..+ -.++.
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa---------------~~vi~~~~~~~~~~~~ 257 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGA---------------DLTLNRRETSVEERRK 257 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTC---------------SEEEETTTSCHHHHHH
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCC---------------cEEEeccccCcchHHH
Confidence 56788999999764 667777776655 599999999999988875322 1122111 00000
Q ss_pred -cccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 156 -LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 156 -~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
..... ....+|+|+-.-.- ...+....+.|+++|.++..
T Consensus 258 ~v~~~~-~g~g~Dvvid~~g~----------~~~~~~~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 258 AIMDIT-HGRGADFILEATGD----------SRALLEGSELLRRGGFYSVA 297 (380)
T ss_dssp HHHHHT-TTSCEEEEEECSSC----------TTHHHHHHHHEEEEEEEEEC
T ss_pred HHHHHh-CCCCCcEEEECCCC----------HHHHHHHHHHHhcCCEEEEE
Confidence 00000 12379999854321 12456778899999998764
No 360
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=94.22 E-value=0.16 Score=40.98 Aligned_cols=96 Identities=18% Similarity=0.014 Sum_probs=59.8
Q ss_pred CCCeEEEecCCC-chhHHHHHhhcCC-eEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccc--cccc
Q 027388 84 RGDVVLDLACGK-GGDLIKWDKAKIG-YYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH--LDKV 159 (224)
Q Consensus 84 ~~~~iLDiGcG~-G~~~~~l~~~~~~-~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~ 159 (224)
++.+||-+|+|. |..+.++++.... +++++|.++..++.+++.-. ..++..+-.++. ....
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga---------------~~~~~~~~~~~~~~v~~~ 231 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGA---------------DYVINPFEEDVVKEVMDI 231 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTC---------------SEEECTTTSCHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCC---------------CEEECCCCcCHHHHHHHH
Confidence 788999999954 6677777765555 89999999998888875422 111111101110 0000
Q ss_pred cCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 160 LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 160 ~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
. ....+|+|+..-.. ...+....+.|+++|.++..
T Consensus 232 ~-~g~g~D~vid~~g~----------~~~~~~~~~~l~~~G~iv~~ 266 (348)
T 2d8a_A 232 T-DGNGVDVFLEFSGA----------PKALEQGLQAVTPAGRVSLL 266 (348)
T ss_dssp T-TTSCEEEEEECSCC----------HHHHHHHHHHEEEEEEEEEC
T ss_pred c-CCCCCCEEEECCCC----------HHHHHHHHHHHhcCCEEEEE
Confidence 0 12479999864321 13567788899999988764
No 361
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=94.21 E-value=0.33 Score=39.27 Aligned_cols=97 Identities=14% Similarity=0.061 Sum_probs=60.8
Q ss_pred HhhcCC------CeEEEecCCC-chhH-HHHH-hhcCCe-EEEEeCChh---HHHHHHHhccCCcccccccccCCCCeeE
Q 027388 80 LYARRG------DVVLDLACGK-GGDL-IKWD-KAKIGY-YVGIDIAEG---SIEDCRTRYNGDADHHQRRKKFSFPARL 146 (224)
Q Consensus 80 ~~~~~~------~~iLDiGcG~-G~~~-~~l~-~~~~~~-~~gvD~s~~---~~~~a~~~~~~~~~~~~~~~~~~~~v~~ 146 (224)
....++ .+||=+|+|. |.++ .+++ +....+ ++++|.++. ..+.+++.-. ..
T Consensus 162 ~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa----------------~~ 225 (357)
T 2b5w_A 162 AYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDA----------------TY 225 (357)
T ss_dssp HHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTC----------------EE
T ss_pred cCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCC----------------cc
Confidence 345677 8999999854 6677 7777 655555 999999998 8888865322 11
Q ss_pred Eeccccccccccc-cCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 147 ICGDCYEVHLDKV-LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 147 ~~~d~~~~~~~~~-~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
+ |..+.+.... .. .+.+|+|+-.-.- ...+....+.|+++|.++..
T Consensus 226 v--~~~~~~~~~i~~~-~gg~Dvvid~~g~----------~~~~~~~~~~l~~~G~iv~~ 272 (357)
T 2b5w_A 226 V--DSRQTPVEDVPDV-YEQMDFIYEATGF----------PKHAIQSVQALAPNGVGALL 272 (357)
T ss_dssp E--ETTTSCGGGHHHH-SCCEEEEEECSCC----------HHHHHHHHHHEEEEEEEEEC
T ss_pred c--CCCccCHHHHHHh-CCCCCEEEECCCC----------hHHHHHHHHHHhcCCEEEEE
Confidence 1 2221111100 00 1379999854321 13567788999999998764
No 362
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.91 E-value=1.2 Score=31.96 Aligned_cols=111 Identities=17% Similarity=0.223 Sum_probs=62.4
Q ss_pred CCeEEEecCCC-chhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccc-ccccC
Q 027388 85 GDVVLDLACGK-GGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHL-DKVLA 161 (224)
Q Consensus 85 ~~~iLDiGcG~-G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~ 161 (224)
+.+|+=+|+|. |......+... ...|+++|.++..++.++.. .+.++.+|..+... ....
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~----------------g~~~~~gd~~~~~~l~~~~- 101 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSE----------------GRNVISGDATDPDFWERIL- 101 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHT----------------TCCEEECCTTCHHHHHTBC-
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHC----------------CCCEEEcCCCCHHHHHhcc-
Confidence 56788888764 33333333334 56899999999887776532 14556677654221 1100
Q ss_pred CCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCChHHHHHHhhhcc
Q 027388 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVIIKKLREEH 220 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~~~~~~~~~~~g 220 (224)
....+|+|+..-. . ......+-...+.+.|++.++....+.. ..+.+.+.|
T Consensus 102 ~~~~ad~vi~~~~------~-~~~~~~~~~~~~~~~~~~~ii~~~~~~~-~~~~l~~~G 152 (183)
T 3c85_A 102 DTGHVKLVLLAMP------H-HQGNQTALEQLQRRNYKGQIAAIAEYPD-QLEGLLESG 152 (183)
T ss_dssp SCCCCCEEEECCS------S-HHHHHHHHHHHHHTTCCSEEEEEESSHH-HHHHHHHHT
T ss_pred CCCCCCEEEEeCC------C-hHHHHHHHHHHHHHCCCCEEEEEECCHH-HHHHHHHcC
Confidence 1356898886431 1 2222333345556677778877765544 344566555
No 363
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=93.73 E-value=0.069 Score=42.74 Aligned_cols=97 Identities=14% Similarity=0.139 Sum_probs=61.1
Q ss_pred hcCCCeEEEecC--CCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccc--cc
Q 027388 82 ARRGDVVLDLAC--GKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH--LD 157 (224)
Q Consensus 82 ~~~~~~iLDiGc--G~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~ 157 (224)
..++.+||=+|+ |.|..+..+++....++++++.++..++.+++.-. -..+...-.++. ..
T Consensus 138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga---------------~~~~~~~~~~~~~~~~ 202 (325)
T 3jyn_A 138 VKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGA---------------WETIDYSHEDVAKRVL 202 (325)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTC---------------SEEEETTTSCHHHHHH
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC---------------CEEEeCCCccHHHHHH
Confidence 457889999983 34667777776666699999999999988876432 111111111110 00
Q ss_pred cccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 158 KVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 158 ~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
.. .....+|+|+.+-.- ..+....+.|+++|.+++.
T Consensus 203 ~~-~~~~g~Dvvid~~g~-----------~~~~~~~~~l~~~G~iv~~ 238 (325)
T 3jyn_A 203 EL-TDGKKCPVVYDGVGQ-----------DTWLTSLDSVAPRGLVVSF 238 (325)
T ss_dssp HH-TTTCCEEEEEESSCG-----------GGHHHHHTTEEEEEEEEEC
T ss_pred HH-hCCCCceEEEECCCh-----------HHHHHHHHHhcCCCEEEEE
Confidence 00 023579999864321 2456778899999998874
No 364
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=93.71 E-value=1 Score=30.43 Aligned_cols=110 Identities=15% Similarity=0.083 Sum_probs=59.6
Q ss_pred CCeEEEecCCCchhHHHHHh---hcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccC
Q 027388 85 GDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 85 ~~~iLDiGcG~G~~~~~l~~---~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (224)
+.+|+=+|+|. .+..++. ....+++++|.++..++...+... +.++.+|..+...-. ..
T Consensus 4 ~m~i~IiG~G~--iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~---------------~~~~~~d~~~~~~l~-~~ 65 (140)
T 1lss_A 4 GMYIIIAGIGR--VGYTLAKSLSEKGHDIVLIDIDKDICKKASAEID---------------ALVINGDCTKIKTLE-DA 65 (140)
T ss_dssp -CEEEEECCSH--HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCS---------------SEEEESCTTSHHHHH-HT
T ss_pred CCEEEEECCCH--HHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcC---------------cEEEEcCCCCHHHHH-Hc
Confidence 35788888754 4444332 344689999999887766654322 455666654322100 00
Q ss_pred CCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCChHHHHHHhhhccc
Q 027388 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVIIKKLREEHF 221 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~~~~~~~~~~~gf 221 (224)
....+|+|+..-.. ......+..+.+.+.++ .++....+.. ..+.+++.|+
T Consensus 66 ~~~~~d~vi~~~~~-------~~~~~~~~~~~~~~~~~-~ii~~~~~~~-~~~~l~~~g~ 116 (140)
T 1lss_A 66 GIEDADMYIAVTGK-------EEVNLMSSLLAKSYGIN-KTIARISEIE-YKDVFERLGV 116 (140)
T ss_dssp TTTTCSEEEECCSC-------HHHHHHHHHHHHHTTCC-CEEEECSSTT-HHHHHHHTTC
T ss_pred CcccCCEEEEeeCC-------chHHHHHHHHHHHcCCC-EEEEEecCHh-HHHHHHHcCC
Confidence 13578998875321 23334455556667775 4555444433 3445666664
No 365
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=93.61 E-value=0.33 Score=39.05 Aligned_cols=96 Identities=17% Similarity=0.086 Sum_probs=61.2
Q ss_pred hcCCCeEEEecC--CCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccc
Q 027388 82 ARRGDVVLDLAC--GKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKV 159 (224)
Q Consensus 82 ~~~~~~iLDiGc--G~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 159 (224)
..++.+||-+|+ |.|..+..++.....++++++.++..++.+++.-. ...+ |..+......
T Consensus 164 ~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga---------------~~~~--d~~~~~~~~~ 226 (343)
T 2eih_A 164 VRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGA---------------DETV--NYTHPDWPKE 226 (343)
T ss_dssp CCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTC---------------SEEE--ETTSTTHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCC---------------CEEE--cCCcccHHHH
Confidence 457889999998 55777777776666699999999998888865322 0111 2211110000
Q ss_pred ---cCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 160 ---LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 160 ---~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
......+|+|+..-. . ..+....+.|+++|.++..
T Consensus 227 ~~~~~~~~~~d~vi~~~g-~----------~~~~~~~~~l~~~G~~v~~ 264 (343)
T 2eih_A 227 VRRLTGGKGADKVVDHTG-A----------LYFEGVIKATANGGRIAIA 264 (343)
T ss_dssp HHHHTTTTCEEEEEESSC-S----------SSHHHHHHHEEEEEEEEES
T ss_pred HHHHhCCCCceEEEECCC-H----------HHHHHHHHhhccCCEEEEE
Confidence 001247999986543 2 1356678889999988764
No 366
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=93.56 E-value=0.18 Score=40.55 Aligned_cols=96 Identities=18% Similarity=0.178 Sum_probs=61.3
Q ss_pred hhcCCCeEEEecC--CCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccc---cc
Q 027388 81 YARRGDVVLDLAC--GKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYE---VH 155 (224)
Q Consensus 81 ~~~~~~~iLDiGc--G~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~---~~ 155 (224)
...++++||-.|+ |.|..+..++.....++++++.++..++.+++.+. .. ..+ |..+ +.
T Consensus 152 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g-------------~~-~~~--d~~~~~~~~ 215 (345)
T 2j3h_A 152 SPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFG-------------FD-DAF--NYKEESDLT 215 (345)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSC-------------CS-EEE--ETTSCSCSH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC-------------Cc-eEE--ecCCHHHHH
Confidence 3567889999997 44667777776666689999999988888864332 00 111 2211 10
Q ss_pred --cccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 156 --LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 156 --~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
.... ..+.+|+++.+-. . ..+....+.|+++|.+++.
T Consensus 216 ~~~~~~--~~~~~d~vi~~~g-------~----~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 216 AALKRC--FPNGIDIYFENVG-------G----KMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp HHHHHH--CTTCEEEEEESSC-------H----HHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHH--hCCCCcEEEECCC-------H----HHHHHHHHHHhcCCEEEEE
Confidence 0000 1257999986532 1 2567788999999998764
No 367
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=93.48 E-value=0.088 Score=42.25 Aligned_cols=99 Identities=17% Similarity=0.141 Sum_probs=61.3
Q ss_pred hhcCCCeEEEecC--CCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccc-
Q 027388 81 YARRGDVVLDLAC--GKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD- 157 (224)
Q Consensus 81 ~~~~~~~iLDiGc--G~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~- 157 (224)
...++.+||=+|+ |.|..+..+++....++++++.++..++.+++.-. -..+..+-.++...
T Consensus 145 ~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga---------------~~~~~~~~~~~~~~~ 209 (334)
T 3qwb_A 145 HVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGA---------------EYLINASKEDILRQV 209 (334)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC---------------SEEEETTTSCHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC---------------cEEEeCCCchHHHHH
Confidence 3467889999995 34667777776666799999999998888866422 11111111111000
Q ss_pred cccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 158 KVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 158 ~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
........+|+|+.+-.- ..+....+.|+++|.+++.
T Consensus 210 ~~~~~~~g~D~vid~~g~-----------~~~~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 210 LKFTNGKGVDASFDSVGK-----------DTFEISLAALKRKGVFVSF 246 (334)
T ss_dssp HHHTTTSCEEEEEECCGG-----------GGHHHHHHHEEEEEEEEEC
T ss_pred HHHhCCCCceEEEECCCh-----------HHHHHHHHHhccCCEEEEE
Confidence 000023579999864321 2456778899999998864
No 368
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.28 E-value=0.57 Score=32.86 Aligned_cols=113 Identities=14% Similarity=0.175 Sum_probs=59.7
Q ss_pred cCCCeEEEecCCC-chhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccc-cccc
Q 027388 83 RRGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHL-DKVL 160 (224)
Q Consensus 83 ~~~~~iLDiGcG~-G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~ 160 (224)
..+.+|+=+|+|. |......+......|+++|.++..++.++.. ..+.++.+|..+... ...
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~---------------~g~~~~~~d~~~~~~l~~~- 80 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSE---------------FSGFTVVGDAAEFETLKEC- 80 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTT---------------CCSEEEESCTTSHHHHHTT-
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhc---------------CCCcEEEecCCCHHHHHHc-
Confidence 4678899999865 3333333333455899999998655433211 113455566543211 000
Q ss_pred CCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCChHHHHHHhhhcc
Q 027388 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVIIKKLREEH 220 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~~~~~~~~~~~g 220 (224)
....+|+|+..-. .......+..+.+.+.+...++...-+... .+.+++.|
T Consensus 81 -~~~~ad~Vi~~~~-------~~~~~~~~~~~~~~~~~~~~iv~~~~~~~~-~~~l~~~G 131 (155)
T 2g1u_A 81 -GMEKADMVFAFTN-------DDSTNFFISMNARYMFNVENVIARVYDPEK-IKIFEENG 131 (155)
T ss_dssp -TGGGCSEEEECSS-------CHHHHHHHHHHHHHTSCCSEEEEECSSGGG-HHHHHTTT
T ss_pred -CcccCCEEEEEeC-------CcHHHHHHHHHHHHHCCCCeEEEEECCHHH-HHHHHHCC
Confidence 1246898886532 133344445555555666666666544432 34455444
No 369
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=93.24 E-value=0.23 Score=39.88 Aligned_cols=98 Identities=11% Similarity=0.040 Sum_probs=60.2
Q ss_pred hhcCCCeEEEecCCC-chhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEec---cccccc
Q 027388 81 YARRGDVVLDLACGK-GGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICG---DCYEVH 155 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~-G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~---d~~~~~ 155 (224)
...++.+||=.|+|. |.++.++++.. ...++++|.++..++.+++.-. ..++.. +..+..
T Consensus 157 ~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa---------------~~~i~~~~~~~~~~~ 221 (346)
T 4a2c_A 157 QGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGA---------------MQTFNSSEMSAPQMQ 221 (346)
T ss_dssp TCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC---------------SEEEETTTSCHHHHH
T ss_pred ccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCC---------------eEEEeCCCCCHHHHH
Confidence 456788999999876 44566666554 4567899999999999887543 112211 111110
Q ss_pred cccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 156 LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 156 ~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
. .......+|+|+..-.. ...+....+++++||.+++.
T Consensus 222 ~--~~~~~~g~d~v~d~~G~----------~~~~~~~~~~l~~~G~~v~~ 259 (346)
T 4a2c_A 222 S--VLRELRFNQLILETAGV----------PQTVELAVEIAGPHAQLALV 259 (346)
T ss_dssp H--HHGGGCSSEEEEECSCS----------HHHHHHHHHHCCTTCEEEEC
T ss_pred H--hhcccCCcccccccccc----------cchhhhhhheecCCeEEEEE
Confidence 0 00023578888754321 23566778899999998864
No 370
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=93.21 E-value=0.15 Score=40.28 Aligned_cols=92 Identities=16% Similarity=0.060 Sum_probs=59.8
Q ss_pred hcCCCeEEEecC--CCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccc-ccccc
Q 027388 82 ARRGDVVLDLAC--GKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYE-VHLDK 158 (224)
Q Consensus 82 ~~~~~~iLDiGc--G~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~ 158 (224)
..++.+||-+|+ |.|..+..+++....++++++.++..++.+++.-. -..+ |..+ .....
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga---------------~~~~--~~~~~~~~~~ 185 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGA---------------EEAA--TYAEVPERAK 185 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTC---------------SEEE--EGGGHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCC---------------CEEE--ECCcchhHHH
Confidence 567899999998 34667777776666699999999988888865321 1111 2211 11111
Q ss_pred ccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 159 VLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 159 ~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
....+|+|+. -.- ..+....+.|+++|.++..
T Consensus 186 ---~~~~~d~vid-~g~-----------~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 186 ---AWGGLDLVLE-VRG-----------KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp ---HTTSEEEEEE-CSC-----------TTHHHHHTTEEEEEEEEEC
T ss_pred ---HhcCceEEEE-CCH-----------HHHHHHHHhhccCCEEEEE
Confidence 1157999986 321 1456788999999988753
No 371
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=93.18 E-value=0.26 Score=39.73 Aligned_cols=94 Identities=15% Similarity=0.140 Sum_probs=59.4
Q ss_pred CCCeEEEec-CCC-chhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEec--cccccccccc
Q 027388 84 RGDVVLDLA-CGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICG--DCYEVHLDKV 159 (224)
Q Consensus 84 ~~~~iLDiG-cG~-G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~--d~~~~~~~~~ 159 (224)
++.+||=+| +|. |..+.++++....++++++.++..++.+++.-. -.++.. ++.+. ....
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa---------------~~vi~~~~~~~~~-~~~~ 213 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGA---------------DIVLNHKESLLNQ-FKTQ 213 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTC---------------SEEECTTSCHHHH-HHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC---------------cEEEECCccHHHH-HHHh
Confidence 688999884 443 667777776666699999999999998887432 011111 11100 0000
Q ss_pred cCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 160 LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 160 ~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
....+|+|+..-. -...+..+.+.|+++|.++..
T Consensus 214 --~~~g~Dvv~d~~g----------~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 214 --GIELVDYVFCTFN----------TDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp --TCCCEEEEEESSC----------HHHHHHHHHHHEEEEEEEEES
T ss_pred --CCCCccEEEECCC----------chHHHHHHHHHhccCCEEEEE
Confidence 2357999986422 123567788999999998753
No 372
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=93.16 E-value=0.1 Score=42.12 Aligned_cols=94 Identities=19% Similarity=0.068 Sum_probs=57.6
Q ss_pred CCCeEEEecCCC-chhHHHHHhhcCC-eEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccccc-
Q 027388 84 RGDVVLDLACGK-GGDLIKWDKAKIG-YYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL- 160 (224)
Q Consensus 84 ~~~~iLDiGcG~-G~~~~~l~~~~~~-~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~- 160 (224)
++.+||-+|+|. |..+.++++.... +++++|.++..++.+++. . ..++ |..+.......
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a---------------~~v~--~~~~~~~~~~~~ 225 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-A---------------DRLV--NPLEEDLLEVVR 225 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-C---------------SEEE--CTTTSCHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-H---------------Hhcc--CcCccCHHHHHH
Confidence 788999999854 6677777766555 899999998777666443 2 1111 11111100000
Q ss_pred -CCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 161 -ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 161 -~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
.....+|+|+..-.- ...+....+.|+++|.++..
T Consensus 226 ~~~~~g~D~vid~~g~----------~~~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 226 RVTGSGVEVLLEFSGN----------EAAIHQGLMALIPGGEARIL 261 (343)
T ss_dssp HHHSSCEEEEEECSCC----------HHHHHHHHHHEEEEEEEEEC
T ss_pred HhcCCCCCEEEECCCC----------HHHHHHHHHHHhcCCEEEEE
Confidence 002479999854321 13467788899999988764
No 373
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=93.03 E-value=0.22 Score=40.31 Aligned_cols=97 Identities=18% Similarity=0.066 Sum_probs=60.8
Q ss_pred hhcCCCeEEEecC--CCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccc--c
Q 027388 81 YARRGDVVLDLAC--GKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH--L 156 (224)
Q Consensus 81 ~~~~~~~iLDiGc--G~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~ 156 (224)
...++.+||=+|+ |.|..+..+++....++++++.++..++.+++.-. ...+..+-.+.. .
T Consensus 164 ~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa---------------~~~~~~~~~~~~~~~ 228 (353)
T 4dup_A 164 GLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGA---------------KRGINYRSEDFAAVI 228 (353)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTC---------------SEEEETTTSCHHHHH
T ss_pred CCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC---------------CEEEeCCchHHHHHH
Confidence 3467889999854 34667777776666799999999999988876432 111111111110 0
Q ss_pred ccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 157 DKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 157 ~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
... ....+|+++.+-.- ..+....+.|+++|.+++.
T Consensus 229 ~~~--~~~g~Dvvid~~g~-----------~~~~~~~~~l~~~G~iv~~ 264 (353)
T 4dup_A 229 KAE--TGQGVDIILDMIGA-----------AYFERNIASLAKDGCLSII 264 (353)
T ss_dssp HHH--HSSCEEEEEESCCG-----------GGHHHHHHTEEEEEEEEEC
T ss_pred HHH--hCCCceEEEECCCH-----------HHHHHHHHHhccCCEEEEE
Confidence 000 13579999865432 1456678899999988764
No 374
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=92.98 E-value=0.18 Score=40.00 Aligned_cols=89 Identities=13% Similarity=-0.038 Sum_probs=58.6
Q ss_pred hhcCCCeEEEecCCC-chhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccc
Q 027388 81 YARRGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKV 159 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 159 (224)
...++.+||=+|+|. |.++.++++....++++++ ++...+.+++.-. -.++ -| ...
T Consensus 139 ~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~lGa---------------~~v~-~d-----~~~- 195 (315)
T 3goh_A 139 PLTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKRGV---------------RHLY-RE-----PSQ- 195 (315)
T ss_dssp CCCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHHTE---------------EEEE-SS-----GGG-
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHcCC---------------CEEE-cC-----HHH-
Confidence 456789999999954 7777788776666999999 9999999876432 1222 12 111
Q ss_pred cCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 160 LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 160 ~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
-...+|+|+-.-.- + .+....+.|+++|.++..
T Consensus 196 --v~~g~Dvv~d~~g~-------~----~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 196 --VTQKYFAIFDAVNS-------Q----NAAALVPSLKANGHIICI 228 (315)
T ss_dssp --CCSCEEEEECC------------------TTGGGEEEEEEEEEE
T ss_pred --hCCCccEEEECCCc-------h----hHHHHHHHhcCCCEEEEE
Confidence 14689999843211 1 124568899999998865
No 375
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=92.75 E-value=0.27 Score=41.02 Aligned_cols=44 Identities=16% Similarity=0.183 Sum_probs=35.0
Q ss_pred CCeEEEecCCCchhHHHHHhh------cCCeEEEEeCChhHHHHHHHhcc
Q 027388 85 GDVVLDLACGKGGDLIKWDKA------KIGYYVGIDIAEGSIEDCRTRYN 128 (224)
Q Consensus 85 ~~~iLDiGcG~G~~~~~l~~~------~~~~~~gvD~s~~~~~~a~~~~~ 128 (224)
...|+|+|+|+|.++..++.. ...+++.||+|+...+.-++++.
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 187 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLG 187 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHh
Confidence 579999999999988877642 13479999999998877776654
No 376
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=92.71 E-value=1.3 Score=36.82 Aligned_cols=111 Identities=18% Similarity=0.138 Sum_probs=70.0
Q ss_pred CCeEEEecCCC-chhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCCC
Q 027388 85 GDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADD 163 (224)
Q Consensus 85 ~~~iLDiGcG~-G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 163 (224)
...|+=+|+|. |......+......|+++|.++..++.+++. .+.++.+|..+...-.. ...
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~----------------g~~vi~GDat~~~~L~~-agi 66 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKF----------------GMKVFYGDATRMDLLES-AGA 66 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHT----------------TCCCEESCTTCHHHHHH-TTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhC----------------CCeEEEcCCCCHHHHHh-cCC
Confidence 45678788765 3333333334556899999999999888643 15678899876432110 024
Q ss_pred CCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCChHHHHHHhhhcc
Q 027388 164 APFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVIIKKLREEH 220 (224)
Q Consensus 164 ~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~~~~~~~~~~~g 220 (224)
..+|+|++... .+.....+....+.+.|...++....+.. -...|.+.|
T Consensus 67 ~~A~~viv~~~-------~~~~n~~i~~~ar~~~p~~~Iiara~~~~-~~~~L~~~G 115 (413)
T 3l9w_A 67 AKAEVLINAID-------DPQTNLQLTEMVKEHFPHLQIIARARDVD-HYIRLRQAG 115 (413)
T ss_dssp TTCSEEEECCS-------SHHHHHHHHHHHHHHCTTCEEEEEESSHH-HHHHHHHTT
T ss_pred CccCEEEECCC-------ChHHHHHHHHHHHHhCCCCeEEEEECCHH-HHHHHHHCC
Confidence 67898876532 24455566667777888888887776644 344455555
No 377
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=92.68 E-value=0.49 Score=37.99 Aligned_cols=101 Identities=13% Similarity=0.072 Sum_probs=60.4
Q ss_pred hhcCCCeEEEecCCCc-hhHHHHHh-hcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccc
Q 027388 81 YARRGDVVLDLACGKG-GDLIKWDK-AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK 158 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~G-~~~~~l~~-~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 158 (224)
...++.+||=+|+|.+ .++..+++ ....+++++|.++..++.+++... ..-+.+...|..+.-..
T Consensus 160 ~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga------------~~~i~~~~~~~~~~v~~- 226 (348)
T 4eez_A 160 GVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGA------------DVTINSGDVNPVDEIKK- 226 (348)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTC------------SEEEEC-CCCHHHHHHH-
T ss_pred CCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCC------------eEEEeCCCCCHHHHhhh-
Confidence 4567889999999874 34445544 356799999999998888876644 11111112222111000
Q ss_pred ccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 159 VLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 159 ~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
.. ....+|.++....- ...+....+.++++|.+++.
T Consensus 227 ~t-~g~g~d~~~~~~~~----------~~~~~~~~~~l~~~G~~v~~ 262 (348)
T 4eez_A 227 IT-GGLGVQSAIVCAVA----------RIAFEQAVASLKPMGKMVAV 262 (348)
T ss_dssp HT-TSSCEEEEEECCSC----------HHHHHHHHHTEEEEEEEEEC
T ss_pred hc-CCCCceEEEEeccC----------cchhheeheeecCCceEEEE
Confidence 00 23467777643221 23567778899999988764
No 378
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=92.53 E-value=0.41 Score=38.73 Aligned_cols=97 Identities=11% Similarity=0.032 Sum_probs=59.1
Q ss_pred hhcCCCeEEEecC--CCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccc
Q 027388 81 YARRGDVVLDLAC--GKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK 158 (224)
Q Consensus 81 ~~~~~~~iLDiGc--G~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 158 (224)
...++.+||-.|+ |.|..+..++.....+++++|.++..++.+++.-. . ..+ |..+.....
T Consensus 159 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~--------------~-~~~--~~~~~~~~~ 221 (354)
T 2j8z_A 159 NVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGA--------------A-AGF--NYKKEDFSE 221 (354)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTC--------------S-EEE--ETTTSCHHH
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC--------------c-EEE--ecCChHHHH
Confidence 3457889999985 44666666666666689999999988888854322 0 111 111111000
Q ss_pred -c--cCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 159 -V--LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 159 -~--~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
. ......+|+++.+-.-. .+....+.|+++|.+++.
T Consensus 222 ~~~~~~~~~~~d~vi~~~G~~-----------~~~~~~~~l~~~G~iv~~ 260 (354)
T 2j8z_A 222 ATLKFTKGAGVNLILDCIGGS-----------YWEKNVNCLALDGRWVLY 260 (354)
T ss_dssp HHHHHTTTSCEEEEEESSCGG-----------GHHHHHHHEEEEEEEEEC
T ss_pred HHHHHhcCCCceEEEECCCch-----------HHHHHHHhccCCCEEEEE
Confidence 0 00234799998654321 356677889999998864
No 379
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=92.51 E-value=1.7 Score=29.64 Aligned_cols=108 Identities=8% Similarity=-0.042 Sum_probs=60.7
Q ss_pred CCeEEEecCCCchhHHHHHh---hcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccC
Q 027388 85 GDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 85 ~~~iLDiGcG~G~~~~~l~~---~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (224)
..+|+=+|+|. ++..++. .....++++|.++..++.++.. .+.++.+|..+...-...
T Consensus 6 ~~~v~I~G~G~--iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~----------------~~~~~~gd~~~~~~l~~~- 66 (141)
T 3llv_A 6 RYEYIVIGSEA--AGVGLVRELTAAGKKVLAVDKSKEKIELLEDE----------------GFDAVIADPTDESFYRSL- 66 (141)
T ss_dssp CCSEEEECCSH--HHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT----------------TCEEEECCTTCHHHHHHS-
T ss_pred CCEEEEECCCH--HHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC----------------CCcEEECCCCCHHHHHhC-
Confidence 45788899854 4444332 3456899999999888777543 156778887653221000
Q ss_pred CCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCChHHHHHHhhhcc
Q 027388 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVIIKKLREEH 220 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~~~~~~~~~~~g 220 (224)
....+|+|+..-. . ......+....+.+. ...++....+.. ..+.+.+.|
T Consensus 67 ~~~~~d~vi~~~~------~-~~~n~~~~~~a~~~~-~~~iia~~~~~~-~~~~l~~~G 116 (141)
T 3llv_A 67 DLEGVSAVLITGS------D-DEFNLKILKALRSVS-DVYAIVRVSSPK-KKEEFEEAG 116 (141)
T ss_dssp CCTTCSEEEECCS------C-HHHHHHHHHHHHHHC-CCCEEEEESCGG-GHHHHHHTT
T ss_pred CcccCCEEEEecC------C-HHHHHHHHHHHHHhC-CceEEEEEcChh-HHHHHHHcC
Confidence 2357898876432 1 223333344444455 555655554433 334455555
No 380
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=92.33 E-value=0.38 Score=38.32 Aligned_cols=96 Identities=14% Similarity=0.093 Sum_probs=59.3
Q ss_pred hcCCCeEEEecC--CCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccc
Q 027388 82 ARRGDVVLDLAC--GKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKV 159 (224)
Q Consensus 82 ~~~~~~iLDiGc--G~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 159 (224)
..++++||-.|+ |.|..+..++.....+++++|.++..++.+++.-. . ..+ |..+......
T Consensus 138 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~--------------~-~~~--~~~~~~~~~~ 200 (327)
T 1qor_A 138 IKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGA--------------W-QVI--NYREEDLVER 200 (327)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTC--------------S-EEE--ETTTSCHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC--------------C-EEE--ECCCccHHHH
Confidence 457889999994 44666666665555699999999988888865321 0 111 2111110000
Q ss_pred ---cCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 160 ---LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 160 ---~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
......+|+++.+-. . ..+..+.+.|+++|.+++.
T Consensus 201 ~~~~~~~~~~D~vi~~~g-~----------~~~~~~~~~l~~~G~iv~~ 238 (327)
T 1qor_A 201 LKEITGGKKVRVVYDSVG-R----------DTWERSLDCLQRRGLMVSF 238 (327)
T ss_dssp HHHHTTTCCEEEEEECSC-G----------GGHHHHHHTEEEEEEEEEC
T ss_pred HHHHhCCCCceEEEECCc-h----------HHHHHHHHHhcCCCEEEEE
Confidence 001347999986543 1 2457788899999988764
No 381
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=92.28 E-value=0.17 Score=41.01 Aligned_cols=97 Identities=20% Similarity=0.130 Sum_probs=59.5
Q ss_pred hhcCCCeEEEecC--CCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccc
Q 027388 81 YARRGDVVLDLAC--GKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK 158 (224)
Q Consensus 81 ~~~~~~~iLDiGc--G~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 158 (224)
...++.+||-.|+ |.|..+..++.....++++++.++..++.+++.-. . ..+ |..+.....
T Consensus 167 ~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga--------------~-~~~--d~~~~~~~~ 229 (351)
T 1yb5_A 167 CVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGA--------------H-EVF--NHREVNYID 229 (351)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC--------------S-EEE--ETTSTTHHH
T ss_pred CCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCC--------------C-EEE--eCCCchHHH
Confidence 3467889999997 34666666666566689999999988887754321 0 111 211111000
Q ss_pred c---cCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 159 V---LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 159 ~---~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
. ......+|+++.+-. . ..+....+.|+++|.+++.
T Consensus 230 ~~~~~~~~~~~D~vi~~~G--------~---~~~~~~~~~l~~~G~iv~~ 268 (351)
T 1yb5_A 230 KIKKYVGEKGIDIIIEMLA--------N---VNLSKDLSLLSHGGRVIVV 268 (351)
T ss_dssp HHHHHHCTTCEEEEEESCH--------H---HHHHHHHHHEEEEEEEEEC
T ss_pred HHHHHcCCCCcEEEEECCC--------h---HHHHHHHHhccCCCEEEEE
Confidence 0 002347999986532 1 2456778999999998764
No 382
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=92.25 E-value=1.5 Score=41.79 Aligned_cols=45 Identities=20% Similarity=0.168 Sum_probs=37.7
Q ss_pred CCCeEEEecCCCchhHHHHHhhcC-CeEEEEeCChhHHHHHHHhcc
Q 027388 84 RGDVVLDLACGKGGDLIKWDKAKI-GYYVGIDIAEGSIEDCRTRYN 128 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~~~~-~~~~gvD~s~~~~~~a~~~~~ 128 (224)
...+++|+-||.|++...+...+. ..+.++|+++.+++..+.++.
T Consensus 850 ~~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~p 895 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNP 895 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHCT
T ss_pred CCceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC
Confidence 456899999999999998876665 457799999999999888765
No 383
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=91.94 E-value=2.2 Score=33.89 Aligned_cols=90 Identities=20% Similarity=0.123 Sum_probs=53.6
Q ss_pred CeEEEecCCC-ch-hHHHHHhhcC-CeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCC
Q 027388 86 DVVLDLACGK-GG-DLIKWDKAKI-GYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (224)
Q Consensus 86 ~~iLDiGcG~-G~-~~~~l~~~~~-~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (224)
.+|.=||+|. |. ++..+...+. .+|+++|.++..++.+.+.-. +.....+..+..
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~---------------~~~~~~~~~~~~------- 91 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGI---------------IDEGTTSIAKVE------- 91 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTS---------------CSEEESCTTGGG-------
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCC---------------cchhcCCHHHHh-------
Confidence 6788898775 22 3333332232 289999999988877764311 111222332200
Q ss_pred CCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEE
Q 027388 163 DAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIG 204 (224)
Q Consensus 163 ~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~ 204 (224)
....|+|+..-.. .....++.++...+++|.+++-
T Consensus 92 ~~~aDvVilavp~-------~~~~~vl~~l~~~l~~~~iv~d 126 (314)
T 3ggo_A 92 DFSPDFVMLSSPV-------RTFREIAKKLSYILSEDATVTD 126 (314)
T ss_dssp GGCCSEEEECSCG-------GGHHHHHHHHHHHSCTTCEEEE
T ss_pred hccCCEEEEeCCH-------HHHHHHHHHHhhccCCCcEEEE
Confidence 2467999865432 3356778888888999876654
No 384
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=91.87 E-value=0.29 Score=39.14 Aligned_cols=95 Identities=20% Similarity=0.242 Sum_probs=60.1
Q ss_pred hcCCCeEEEecC--CCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccc--
Q 027388 82 ARRGDVVLDLAC--GKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD-- 157 (224)
Q Consensus 82 ~~~~~~iLDiGc--G~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-- 157 (224)
..++.+||-.|+ |.|..+..++.....+++++|.++..++.+++.-. . ..+ |..+....
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~--------------~-~~~--d~~~~~~~~~ 205 (333)
T 1wly_A 143 VKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGC--------------H-HTI--NYSTQDFAEV 205 (333)
T ss_dssp CCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTC--------------S-EEE--ETTTSCHHHH
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC--------------C-EEE--ECCCHHHHHH
Confidence 457889999995 55667777766666699999999988888765321 0 111 22111100
Q ss_pred --cccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 158 --KVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 158 --~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
... ....+|+++.+-.- ..+....+.|+++|.++..
T Consensus 206 i~~~~-~~~~~d~vi~~~g~-----------~~~~~~~~~l~~~G~iv~~ 243 (333)
T 1wly_A 206 VREIT-GGKGVDVVYDSIGK-----------DTLQKSLDCLRPRGMCAAY 243 (333)
T ss_dssp HHHHH-TTCCEEEEEECSCT-----------TTHHHHHHTEEEEEEEEEC
T ss_pred HHHHh-CCCCCeEEEECCcH-----------HHHHHHHHhhccCCEEEEE
Confidence 000 13479999865321 2456788899999988764
No 385
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=91.80 E-value=0.24 Score=38.35 Aligned_cols=76 Identities=14% Similarity=0.215 Sum_probs=47.3
Q ss_pred eeEEeccccccccccccCCCCCeeEEEEccccccc---cC---CH----HHHHHHHHHHHhhccCCeEEEEEeCCh--HH
Q 027388 144 ARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYS---WS---TE----ARARRALANVSALLRPGGTFIGTMPDA--NV 211 (224)
Q Consensus 144 v~~~~~d~~~~~~~~~~~~~~~~D~i~~~~~l~~~---~~---~~----~~~~~~l~~~~~~lk~gG~li~~~~~~--~~ 211 (224)
..++++|..+... .. +.++||+|++.-....- .+ +. ......+..+.++|++||.+++...+. ..
T Consensus 5 ~~l~~gD~~~~l~-~l--~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~~d~~~~~ 81 (260)
T 1g60_A 5 NKIHQMNCFDFLD-QV--ENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFNTPFNCAF 81 (260)
T ss_dssp SSEEECCHHHHHH-HS--CTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEECHHHHHH
T ss_pred CeEEechHHHHHH-hc--cccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEcCcHHHHH
Confidence 4677888754321 11 35789999987543211 00 11 235667888899999999999885432 33
Q ss_pred HHHHhhhcccc
Q 027388 212 IIKKLREEHFC 222 (224)
Q Consensus 212 ~~~~~~~~gf~ 222 (224)
+...+.+.||.
T Consensus 82 ~~~~~~~~gf~ 92 (260)
T 1g60_A 82 ICQYLVSKGMI 92 (260)
T ss_dssp HHHHHHHTTCE
T ss_pred HHHHHHhhccc
Confidence 45567777763
No 386
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=91.56 E-value=0.62 Score=37.66 Aligned_cols=96 Identities=20% Similarity=0.114 Sum_probs=58.5
Q ss_pred hhc-CCCeEEEecCCC-chhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEec-cccccccc
Q 027388 81 YAR-RGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICG-DCYEVHLD 157 (224)
Q Consensus 81 ~~~-~~~~iLDiGcG~-G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~-d~~~~~~~ 157 (224)
... ++.+||=+|+|. |.++.++++....++++++.++..++.+++.+-. . .++.. +...+.
T Consensus 176 ~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa-----------~---~vi~~~~~~~~~-- 239 (357)
T 2cf5_A 176 GLKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGA-----------D---DYVIGSDQAKMS-- 239 (357)
T ss_dssp STTSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCC-----------S---CEEETTCHHHHH--
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCC-----------c---eeeccccHHHHH--
Confidence 345 788999999764 5566677665556899999999888887744320 0 11111 100010
Q ss_pred cccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 158 KVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 158 ~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
. ..+.+|+|+-.-.-. ..+....+.|+++|.++..
T Consensus 240 ~---~~~g~D~vid~~g~~----------~~~~~~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 240 E---LADSLDYVIDTVPVH----------HALEPYLSLLKLDGKLILM 274 (357)
T ss_dssp H---STTTEEEEEECCCSC----------CCSHHHHTTEEEEEEEEEC
T ss_pred H---hcCCCCEEEECCCCh----------HHHHHHHHHhccCCEEEEe
Confidence 0 124799998543211 1234567899999998764
No 387
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=91.56 E-value=1 Score=36.57 Aligned_cols=96 Identities=15% Similarity=0.116 Sum_probs=58.5
Q ss_pred hhc-CCCeEEEecCCC-chhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccc-cc
Q 027388 81 YAR-RGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH-LD 157 (224)
Q Consensus 81 ~~~-~~~~iLDiGcG~-G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~ 157 (224)
... ++.+||=+|+|. |..+.++++....++++++.++..++.+++.+.. ..++ |..+.. ..
T Consensus 183 ~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa--------------~~v~--~~~~~~~~~ 246 (366)
T 1yqd_A 183 GLDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGA--------------DSFL--VSRDQEQMQ 246 (366)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCC--------------SEEE--ETTCHHHHH
T ss_pred CcCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCC--------------ceEE--eccCHHHHH
Confidence 345 788999999754 5566667666566899999999888887644330 0111 111110 10
Q ss_pred cccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 158 KVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 158 ~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
. ..+.+|+|+..-.... .+....+.|+++|.++..
T Consensus 247 ~---~~~~~D~vid~~g~~~----------~~~~~~~~l~~~G~iv~~ 281 (366)
T 1yqd_A 247 A---AAGTLDGIIDTVSAVH----------PLLPLFGLLKSHGKLILV 281 (366)
T ss_dssp H---TTTCEEEEEECCSSCC----------CSHHHHHHEEEEEEEEEC
T ss_pred H---hhCCCCEEEECCCcHH----------HHHHHHHHHhcCCEEEEE
Confidence 0 1247999986533211 234566788999988763
No 388
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=91.51 E-value=0.62 Score=36.98 Aligned_cols=90 Identities=13% Similarity=0.045 Sum_probs=58.4
Q ss_pred eEEEecC--CCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCCCC
Q 027388 87 VVLDLAC--GKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDA 164 (224)
Q Consensus 87 ~iLDiGc--G~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~ 164 (224)
+||=+|+ |.|.++.++++....++++++.++...+.+++.-. . ..+-..+... .... ..+
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa------------~--~vi~~~~~~~--~~~~--~~~ 210 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGA------------N--RILSRDEFAE--SRPL--EKQ 210 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTC------------S--EEEEGGGSSC--CCSS--CCC
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC------------C--EEEecCCHHH--HHhh--cCC
Confidence 4888887 44778888887766699999999999999976532 1 1111111111 1000 235
Q ss_pred CeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 165 PFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 165 ~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
.+|+++-.- .. ..+....+.|+++|.++..
T Consensus 211 ~~d~v~d~~-------g~----~~~~~~~~~l~~~G~iv~~ 240 (324)
T 3nx4_A 211 LWAGAIDTV-------GD----KVLAKVLAQMNYGGCVAAC 240 (324)
T ss_dssp CEEEEEESS-------CH----HHHHHHHHTEEEEEEEEEC
T ss_pred CccEEEECC-------Cc----HHHHHHHHHHhcCCEEEEE
Confidence 799887432 22 2678888999999998864
No 389
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=91.49 E-value=0.52 Score=37.53 Aligned_cols=96 Identities=15% Similarity=0.075 Sum_probs=57.5
Q ss_pred hcCCC-eEEEecC--CCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEe-ccccccccc
Q 027388 82 ARRGD-VVLDLAC--GKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLIC-GDCYEVHLD 157 (224)
Q Consensus 82 ~~~~~-~iLDiGc--G~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~-~d~~~~~~~ 157 (224)
..++. +||=+|+ |.|..+.++++....++++++.++..++.+++.-. . .++. .+.......
T Consensus 146 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa------------~---~~i~~~~~~~~~~~ 210 (328)
T 1xa0_A 146 LTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGA------------K---EVLAREDVMAERIR 210 (328)
T ss_dssp CCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTC------------S---EEEECC--------
T ss_pred CCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCC------------c---EEEecCCcHHHHHH
Confidence 34554 7999997 44667777776666689999999888888865322 0 1111 111000000
Q ss_pred cccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 158 KVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 158 ~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
.. ....+|+|+-.-.- ..+....+.++++|.+++.
T Consensus 211 ~~--~~~~~d~vid~~g~-----------~~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 211 PL--DKQRWAAAVDPVGG-----------RTLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp -C--CSCCEEEEEECSTT-----------TTHHHHHHTEEEEEEEEEC
T ss_pred Hh--cCCcccEEEECCcH-----------HHHHHHHHhhccCCEEEEE
Confidence 00 23479998754321 1356778899999998864
No 390
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=91.35 E-value=0.4 Score=38.36 Aligned_cols=62 Identities=21% Similarity=0.311 Sum_probs=40.8
Q ss_pred eeEE-eccccccccccccCCCCCeeEEEEccccccc---c---C-CHHHHHHHHHHHHhhccCCeEEEEEeCC
Q 027388 144 ARLI-CGDCYEVHLDKVLADDAPFDICSCQFAMHYS---W---S-TEARARRALANVSALLRPGGTFIGTMPD 208 (224)
Q Consensus 144 v~~~-~~d~~~~~~~~~~~~~~~~D~i~~~~~l~~~---~---~-~~~~~~~~l~~~~~~lk~gG~li~~~~~ 208 (224)
..++ ++|..+... .. +.++||+|++.-..... + . -.......+..+.++|+|||.+++....
T Consensus 39 ~~l~i~gD~l~~L~-~l--~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~ 108 (319)
T 1eg2_A 39 RHVYDVCDCLDTLA-KL--PDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGL 108 (319)
T ss_dssp EEEEEECCHHHHHH-TS--CTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred ceEEECCcHHHHHH-hC--ccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCc
Confidence 5667 898765321 11 45789999987543211 0 0 0134677888999999999999987553
No 391
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=91.31 E-value=0.91 Score=36.59 Aligned_cols=98 Identities=11% Similarity=-0.028 Sum_probs=59.9
Q ss_pred hhcCC--CeEEEecC--CCchhHHHHHhhcCC-eEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccc
Q 027388 81 YARRG--DVVLDLAC--GKGGDLIKWDKAKIG-YYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH 155 (224)
Q Consensus 81 ~~~~~--~~iLDiGc--G~G~~~~~l~~~~~~-~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 155 (224)
...++ .+||=.|+ |.|..+..++..... ++++++.++..++.+++.+. .. .. .|..+..
T Consensus 155 ~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g-------------~~-~~--~d~~~~~ 218 (357)
T 2zb4_A 155 HITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELG-------------FD-AA--INYKKDN 218 (357)
T ss_dssp CCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSC-------------CS-EE--EETTTSC
T ss_pred CCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcC-------------Cc-eE--EecCchH
Confidence 45677 89999998 335566666655555 89999999988887765332 00 11 1221111
Q ss_pred ccccc--CCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 156 LDKVL--ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 156 ~~~~~--~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
..... ...+.+|+++.+-. . ..+....+.|+++|.+++.
T Consensus 219 ~~~~~~~~~~~~~d~vi~~~G-------~----~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 219 VAEQLRESCPAGVDVYFDNVG-------G----NISDTVISQMNENSHIILC 259 (357)
T ss_dssp HHHHHHHHCTTCEEEEEESCC-------H----HHHHHHHHTEEEEEEEEEC
T ss_pred HHHHHHHhcCCCCCEEEECCC-------H----HHHHHHHHHhccCcEEEEE
Confidence 00000 01237999986532 1 3567788999999998764
No 392
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=91.10 E-value=2.1 Score=31.74 Aligned_cols=107 Identities=10% Similarity=0.038 Sum_probs=62.6
Q ss_pred eEEEecCCCchhHHHHHh---hcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccc-ccccCC
Q 027388 87 VVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHL-DKVLAD 162 (224)
Q Consensus 87 ~iLDiGcG~G~~~~~l~~---~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~~ 162 (224)
+|+=+|+ |.++..++. .....++++|.++..++...+... +.++.+|..+... ... .
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~---------------~~~i~gd~~~~~~l~~a--~ 62 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLK---------------ATIIHGDGSHKEILRDA--E 62 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSS---------------SEEEESCTTSHHHHHHH--T
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcC---------------CeEEEcCCCCHHHHHhc--C
Confidence 3555665 556655543 345689999999988877654432 5678888765321 111 2
Q ss_pred CCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCChHHHHHHhhhcc
Q 027388 163 DAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVIIKKLREEH 220 (224)
Q Consensus 163 ~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~~~~~~~~~~~g 220 (224)
...+|+|++... .+.....+....+.+.+...++....+.. ..+.++..|
T Consensus 63 i~~ad~vi~~~~-------~d~~n~~~~~~a~~~~~~~~iia~~~~~~-~~~~l~~~G 112 (218)
T 3l4b_C 63 VSKNDVVVILTP-------RDEVNLFIAQLVMKDFGVKRVVSLVNDPG-NMEIFKKMG 112 (218)
T ss_dssp CCTTCEEEECCS-------CHHHHHHHHHHHHHTSCCCEEEECCCSGG-GHHHHHHHT
T ss_pred cccCCEEEEecC-------CcHHHHHHHHHHHHHcCCCeEEEEEeCcc-hHHHHHHCC
Confidence 357898886532 23444555556666666666666544432 234445554
No 393
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=90.99 E-value=5.2 Score=32.11 Aligned_cols=119 Identities=8% Similarity=-0.017 Sum_probs=71.4
Q ss_pred CCCeEEEecCCCchhHHHHHhh--cCCeEEEEeCChhHHHHHHHhccCCcccc-----------ccc---ccCCCCeeEE
Q 027388 84 RGDVVLDLACGKGGDLIKWDKA--KIGYYVGIDIAEGSIEDCRTRYNGDADHH-----------QRR---KKFSFPARLI 147 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~~--~~~~~~gvD~s~~~~~~a~~~~~~~~~~~-----------~~~---~~~~~~v~~~ 147 (224)
+...|+-+|||.-.....+... ....++=||.-. .++.-++.+...+... ... .-...+.+++
T Consensus 90 ~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~P~-vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v 168 (334)
T 3iei_A 90 CHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDFPM-IVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVI 168 (334)
T ss_dssp TCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEECHH-HHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEE
T ss_pred CCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCcHH-HHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEE
Confidence 4678999999998877777543 234677777744 3333222222100000 000 0014567888
Q ss_pred eccccccccc-c----ccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 148 CGDCYEVHLD-K----VLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 148 ~~d~~~~~~~-~----~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
.+|+.+.... . ........-++++=+++.|+ +.+...++|+.+.+...+|..++..
T Consensus 169 ~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL--~~~~~~~ll~~ia~~f~~~~~i~yE 229 (334)
T 3iei_A 169 GADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYM--TPEQSANLLKWAANSFERAMFINYE 229 (334)
T ss_dssp ECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGS--CHHHHHHHHHHHHHHCSSEEEEEEE
T ss_pred ccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCC--CHHHHHHHHHHHHHhCCCceEEEEe
Confidence 9998764211 1 01133455677788889998 7888999999999887665555554
No 394
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=90.90 E-value=2.1 Score=35.42 Aligned_cols=44 Identities=9% Similarity=-0.003 Sum_probs=36.2
Q ss_pred CCeEEEecCCCchhHHHHHhhc--CCe----EEEEeCChhHHHHHHHhcc
Q 027388 85 GDVVLDLACGKGGDLIKWDKAK--IGY----YVGIDIAEGSIEDCRTRYN 128 (224)
Q Consensus 85 ~~~iLDiGcG~G~~~~~l~~~~--~~~----~~gvD~s~~~~~~a~~~~~ 128 (224)
..+++|+-||.|++...+...+ ... +.++|+++.+++.-+.++.
T Consensus 10 ~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~ 59 (403)
T 4dkj_A 10 VIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHS 59 (403)
T ss_dssp EEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHC
T ss_pred cceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcC
Confidence 3589999999999998876554 334 7799999999999888876
No 395
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=90.76 E-value=1.5 Score=34.67 Aligned_cols=94 Identities=17% Similarity=0.080 Sum_probs=57.8
Q ss_pred HhhcCCCeEEEec-CCC-chhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccc-ccc
Q 027388 80 LYARRGDVVLDLA-CGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYE-VHL 156 (224)
Q Consensus 80 ~~~~~~~~iLDiG-cG~-G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~ 156 (224)
....++.+||=+| +|. |.++.++++....++++++ ++...+.+++.-. -.++...-.+ +..
T Consensus 148 ~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~lGa---------------~~~i~~~~~~~~~~ 211 (321)
T 3tqh_A 148 AEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKALGA---------------EQCINYHEEDFLLA 211 (321)
T ss_dssp TTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHHHHTC---------------SEEEETTTSCHHHH
T ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHHHcCC---------------CEEEeCCCcchhhh
Confidence 3567889999886 443 7777788776666888887 5555777765422 1122111111 111
Q ss_pred ccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 157 DKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 157 ~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
....+|+|+-.-. .+ .+....+.|+++|.++..
T Consensus 212 -----~~~g~D~v~d~~g-------~~----~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 212 -----ISTPVDAVIDLVG-------GD----VGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp -----CCSCEEEEEESSC-------HH----HHHHHGGGEEEEEEEEEC
T ss_pred -----hccCCCEEEECCC-------cH----HHHHHHHhccCCCEEEEe
Confidence 2257999985422 11 236788999999998865
No 396
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=90.53 E-value=1.4 Score=36.96 Aligned_cols=46 Identities=22% Similarity=0.206 Sum_probs=36.1
Q ss_pred hhcCCCeEEEecC-C-CchhHHHHHhhcCCeEEEEeCChhHHHHHHHh
Q 027388 81 YARRGDVVLDLAC-G-KGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTR 126 (224)
Q Consensus 81 ~~~~~~~iLDiGc-G-~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~ 126 (224)
...++.+||=+|+ | .|.++.++++....++++++.++..++.+++.
T Consensus 225 ~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~l 272 (456)
T 3krt_A 225 GMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAM 272 (456)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhh
Confidence 3467889999997 3 36677777776677899999999999988764
No 397
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=90.37 E-value=2.2 Score=37.87 Aligned_cols=116 Identities=12% Similarity=0.099 Sum_probs=64.2
Q ss_pred CCCeEEEecCCCchhHHHHHhh-c--------CCeEEEEeCChhHHHHHHHhccCCcccc-------ccc--------cc
Q 027388 84 RGDVVLDLACGKGGDLIKWDKA-K--------IGYYVGIDIAEGSIEDCRTRYNGDADHH-------QRR--------KK 139 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~~-~--------~~~~~gvD~s~~~~~~a~~~~~~~~~~~-------~~~--------~~ 139 (224)
+...|+-+|||.-.....+... . ...++=||..+.+... ++.+....... ... .-
T Consensus 107 ~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~p~v~~~K-~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~ 185 (695)
T 2zwa_A 107 KKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDYSDLLKIK-IELIKTIPELSKIIGLSEDKDYVDDSNVDFL 185 (695)
T ss_dssp SEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEECHHHHHHH-HHHHHHCHHHHHHTTCCSSCSSCSCTTCCCE
T ss_pred CCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECccHHHHHHH-HHHHHcChHHHHhhccccccccccccccccc
Confidence 4568999999998888777543 1 2244555554432222 22222110000 000 00
Q ss_pred CCCCeeEEecccccccc-ccc----cC-CCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEE
Q 027388 140 FSFPARLICGDCYEVHL-DKV----LA-DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIG 204 (224)
Q Consensus 140 ~~~~v~~~~~d~~~~~~-~~~----~~-~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~ 204 (224)
...+.+++.+|+.+... ... .+ ....--++++=.++.|+ +.+...++|+.+.+. ++|.+++
T Consensus 186 ~s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl--~~~~~~~ll~~~~~~--~~~~~~~ 252 (695)
T 2zwa_A 186 TTPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYM--KPERSDSIIEATSKM--ENSHFII 252 (695)
T ss_dssp ECSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGS--CHHHHHHHHHHHHTS--SSEEEEE
T ss_pred cCCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEc--CHHHHHHHHHHHhhC--CCceEEE
Confidence 01357888999987421 111 11 22344566677788888 778889999888854 5666555
No 398
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=90.19 E-value=1.4 Score=35.71 Aligned_cols=91 Identities=14% Similarity=-0.046 Sum_probs=56.5
Q ss_pred CCeEEEecCCC-chhHHHHHhhcCCeEEEEeCCh---hHHHHHHHhccCCcccccccccCCCCeeEEecccccccccccc
Q 027388 85 GDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAE---GSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (224)
Q Consensus 85 ~~~iLDiGcG~-G~~~~~l~~~~~~~~~gvD~s~---~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (224)
+.+||=+|+|. |..+..+++....+++++|.++ ..++.+++.-. ..+ | .+ ......
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga----------------~~v--~-~~-~~~~~~ 240 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKT----------------NYY--N-SS-NGYDKL 240 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTC----------------EEE--E-CT-TCSHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCC----------------cee--c-hH-HHHHHH
Confidence 88999999843 5556666655555999999998 77777765422 111 2 21 110000
Q ss_pred -CCCCCeeEEEEccccccccCCHHHHHHHH-HHHHhhccCCeEEEEE
Q 027388 161 -ADDAPFDICSCQFAMHYSWSTEARARRAL-ANVSALLRPGGTFIGT 205 (224)
Q Consensus 161 -~~~~~~D~i~~~~~l~~~~~~~~~~~~~l-~~~~~~lk~gG~li~~ 205 (224)
.....+|+|+..-... ..+ ....+.|+++|.+++.
T Consensus 241 ~~~~~~~d~vid~~g~~----------~~~~~~~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 241 KDSVGKFDVIIDATGAD----------VNILGNVIPLLGRNGVLGLF 277 (366)
T ss_dssp HHHHCCEEEEEECCCCC----------THHHHHHGGGEEEEEEEEEC
T ss_pred HHhCCCCCEEEECCCCh----------HHHHHHHHHHHhcCCEEEEE
Confidence 0015799998654321 134 7788999999988764
No 399
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=89.96 E-value=0.76 Score=36.58 Aligned_cols=96 Identities=16% Similarity=0.133 Sum_probs=58.2
Q ss_pred hcCCC-eEEEecC--CCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEec-cccccccc
Q 027388 82 ARRGD-VVLDLAC--GKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICG-DCYEVHLD 157 (224)
Q Consensus 82 ~~~~~-~iLDiGc--G~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~-d~~~~~~~ 157 (224)
..++. +||=+|+ |.|..+.++++....++++++.++..++.+++.-. . ..+.. +.......
T Consensus 147 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa------------~---~v~~~~~~~~~~~~ 211 (330)
T 1tt7_A 147 LSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGA------------S---EVISREDVYDGTLK 211 (330)
T ss_dssp CCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTC------------S---EEEEHHHHCSSCCC
T ss_pred cCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC------------c---EEEECCCchHHHHH
Confidence 34554 8999997 34667777776655689999999888888876422 0 11111 11000000
Q ss_pred cccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 158 KVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 158 ~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
.. ....+|+|+..-. . ..+....+.++++|.+++.
T Consensus 212 ~~--~~~~~d~vid~~g-------~----~~~~~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 212 AL--SKQQWQGAVDPVG-------G----KQLASLLSKIQYGGSVAVS 246 (330)
T ss_dssp SS--CCCCEEEEEESCC-------T----HHHHHHHTTEEEEEEEEEC
T ss_pred Hh--hcCCccEEEECCc-------H----HHHHHHHHhhcCCCEEEEE
Confidence 00 2347999875431 1 2467788899999998764
No 400
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=89.91 E-value=0.86 Score=32.37 Aligned_cols=103 Identities=16% Similarity=0.127 Sum_probs=60.0
Q ss_pred CCCeEEEecCCCchhHHHHHhh-cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCC
Q 027388 84 RGDVVLDLACGKGGDLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~~-~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (224)
-..-|||+|-|+|+.--.+.+. ...+++.+|--- . .+....+..-.++.+|+.+........-
T Consensus 40 ~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~----------~------~hp~~~P~~e~~ilGdi~~tL~~~~~r~ 103 (174)
T 3iht_A 40 LSGPVYELGLGNGRTYHHLRQHVQGREIYVFERAV----------A------SHPDSTPPEAQLILGDIRETLPATLERF 103 (174)
T ss_dssp CCSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSC----------C------CCGGGCCCGGGEEESCHHHHHHHHHHHH
T ss_pred CCCceEEecCCCChhHHHHHHhCCCCcEEEEEeee----------c------cCCCCCCchHheecccHHHHHHHHHHhc
Confidence 4567999999999988887764 456799999422 1 0122334445788888876432100000
Q ss_pred CCCeeEEEEccccccccCCHHHHHHHH-----HHHHhhccCCeEEEEEeC
Q 027388 163 DAPFDICSCQFAMHYSWSTEARARRAL-----ANVSALLRPGGTFIGTMP 207 (224)
Q Consensus 163 ~~~~D~i~~~~~l~~~~~~~~~~~~~l-----~~~~~~lk~gG~li~~~~ 207 (224)
....-++.+....++ ++...+. --+..+|.|||+++-..|
T Consensus 104 g~~a~LaHaD~G~g~-----~~~d~a~a~~lsplI~~~la~GGi~vS~~p 148 (174)
T 3iht_A 104 GATASLVHADLGGHN-----REKNDRFARLISPLIEPHLAQGGLMVSSDR 148 (174)
T ss_dssp CSCEEEEEECCCCSC-----HHHHHHHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred CCceEEEEeecCCCC-----cchhHHHHHhhhHHHHHHhcCCcEEEeCCc
Confidence 345555555544443 2222222 235568899998886543
No 401
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=89.20 E-value=0.38 Score=39.19 Aligned_cols=97 Identities=21% Similarity=0.125 Sum_probs=56.9
Q ss_pred hcCCCeEEEecC-C-CchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccc
Q 027388 82 ARRGDVVLDLAC-G-KGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKV 159 (224)
Q Consensus 82 ~~~~~~iLDiGc-G-~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 159 (224)
..++.+||=.|+ | .|..+.++++....++++++ ++...+.+++.-. -.++ |..+......
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa---------------~~v~--~~~~~~~~~~ 242 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRKLGA---------------DDVI--DYKSGSVEEQ 242 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTC---------------SEEE--ETTSSCHHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHHcCC---------------CEEE--ECCchHHHHH
Confidence 467889999983 3 46677777766666899988 7777777754321 1111 1111111000
Q ss_pred cCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 160 LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 160 ~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
......+|+|+..-.-. ...+....+.++++|.++..
T Consensus 243 ~~~~~g~D~vid~~g~~---------~~~~~~~~~~l~~~G~iv~~ 279 (375)
T 2vn8_A 243 LKSLKPFDFILDNVGGS---------TETWAPDFLKKWSGATYVTL 279 (375)
T ss_dssp HHTSCCBSEEEESSCTT---------HHHHGGGGBCSSSCCEEEES
T ss_pred HhhcCCCCEEEECCCCh---------hhhhHHHHHhhcCCcEEEEe
Confidence 00125799998543211 12345677889999998865
No 402
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=89.17 E-value=1.8 Score=35.18 Aligned_cols=97 Identities=7% Similarity=-0.035 Sum_probs=57.3
Q ss_pred cCCCeEEEecCC--CchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccccc
Q 027388 83 RRGDVVLDLACG--KGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (224)
Q Consensus 83 ~~~~~iLDiGcG--~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (224)
.++.+||=+|++ .|.++.++++....+++++. ++..++.+++.-. ..++...-.++......
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa---------------~~vi~~~~~~~~~~v~~ 226 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSRGA---------------EEVFDYRAPNLAQTIRT 226 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTC---------------SEEEETTSTTHHHHHHH
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHcCC---------------cEEEECCCchHHHHHHH
Confidence 677899999984 57788888877666888875 8888888865422 11221111111000000
Q ss_pred CCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhc-cCCeEEEEE
Q 027388 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALL-RPGGTFIGT 205 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~l-k~gG~li~~ 205 (224)
...+.+|+|+-.-.- ...+....+.| ++||.++..
T Consensus 227 ~t~g~~d~v~d~~g~----------~~~~~~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 227 YTKNNLRYALDCITN----------VESTTFCFAAIGRAGGHYVSL 262 (371)
T ss_dssp HTTTCCCEEEESSCS----------HHHHHHHHHHSCTTCEEEEES
T ss_pred HccCCccEEEECCCc----------hHHHHHHHHHhhcCCCEEEEE
Confidence 012459999853221 13456677778 689988764
No 403
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=89.10 E-value=0.53 Score=37.85 Aligned_cols=95 Identities=16% Similarity=0.077 Sum_probs=59.9
Q ss_pred hhcCCCeEEEecC--CCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccc--
Q 027388 81 YARRGDVVLDLAC--GKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHL-- 156 (224)
Q Consensus 81 ~~~~~~~iLDiGc--G~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-- 156 (224)
...++.+||=+|+ |.|..+..+++....+++++ .++..++.+++.-. ..+. +-.+...
T Consensus 147 ~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lGa----------------~~i~-~~~~~~~~~ 208 (343)
T 3gaz_A 147 QVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLGA----------------TPID-ASREPEDYA 208 (343)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHTS----------------EEEE-TTSCHHHHH
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcCC----------------CEec-cCCCHHHHH
Confidence 4567899999995 33777777777666689999 88888888866432 1121 1111100
Q ss_pred ccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 157 DKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 157 ~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
.... ....+|+|+-.-. . ..+....+.|+++|.++..
T Consensus 209 ~~~~-~~~g~D~vid~~g-------~----~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 209 AEHT-AGQGFDLVYDTLG-------G----PVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp HHHH-TTSCEEEEEESSC-------T----HHHHHHHHHEEEEEEEEES
T ss_pred HHHh-cCCCceEEEECCC-------c----HHHHHHHHHHhcCCeEEEE
Confidence 0000 2357999985422 1 2567778899999998863
No 404
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=88.92 E-value=3.1 Score=31.12 Aligned_cols=107 Identities=11% Similarity=0.005 Sum_probs=63.6
Q ss_pred CCCeEEEecCCCchhHHHHHhh---cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccc-ccc
Q 027388 84 RGDVVLDLACGKGGDLIKWDKA---KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHL-DKV 159 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~~---~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~ 159 (224)
...+|+=+|+| ..+..+++. ... ++++|.++..++.+. . .+.++.+|..+... ...
T Consensus 8 ~~~~viI~G~G--~~G~~la~~L~~~g~-v~vid~~~~~~~~~~---~--------------~~~~i~gd~~~~~~l~~a 67 (234)
T 2aef_A 8 KSRHVVICGWS--ESTLECLRELRGSEV-FVLAEDENVRKKVLR---S--------------GANFVHGDPTRVSDLEKA 67 (234)
T ss_dssp --CEEEEESCC--HHHHHHHHHSTTSEE-EEEESCGGGHHHHHH---T--------------TCEEEESCTTCHHHHHHT
T ss_pred CCCEEEEECCC--hHHHHHHHHHHhCCe-EEEEECCHHHHHHHh---c--------------CCeEEEcCCCCHHHHHhc
Confidence 34578888875 555555442 234 889999998777665 2 26788898865321 111
Q ss_pred cCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCChHHHHHHhhhcc
Q 027388 160 LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVIIKKLREEH 220 (224)
Q Consensus 160 ~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~~~~~~~~~~~g 220 (224)
.-..+|+|++... .+.....+....+.+.++..++....+.... +.+++.|
T Consensus 68 --~i~~ad~vi~~~~-------~d~~n~~~~~~a~~~~~~~~iia~~~~~~~~-~~l~~~G 118 (234)
T 2aef_A 68 --NVRGARAVIVDLE-------SDSETIHCILGIRKIDESVRIIAEAERYENI-EQLRMAG 118 (234)
T ss_dssp --TCTTCSEEEECCS-------CHHHHHHHHHHHHHHCSSSEEEEECSSGGGH-HHHHHHT
T ss_pred --CcchhcEEEEcCC-------CcHHHHHHHHHHHHHCCCCeEEEEECCHhHH-HHHHHCC
Confidence 2467898886532 1334445555666678877777766554432 4444554
No 405
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=88.81 E-value=4.4 Score=28.03 Aligned_cols=111 Identities=13% Similarity=0.010 Sum_probs=62.7
Q ss_pred CCeEEEecCCCchhHHHHHh---hcCCeEEEEeCC-hhHHHHHHHhccCCcccccccccCCCCeeEEecccccccc-ccc
Q 027388 85 GDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIA-EGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHL-DKV 159 (224)
Q Consensus 85 ~~~iLDiGcG~G~~~~~l~~---~~~~~~~gvD~s-~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~ 159 (224)
..+|+=+|+ |..+..++. .....++.+|.+ +...+....... ..+.++.+|..+... ...
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~-------------~~~~~i~gd~~~~~~l~~a 67 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG-------------DNADVIPGDSNDSSVLKKA 67 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC-------------TTCEEEESCTTSHHHHHHH
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc-------------CCCeEEEcCCCCHHHHHHc
Confidence 346776776 555555443 345689999997 454444443322 126788888764321 111
Q ss_pred cCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCChHHHHHHhhhcc
Q 027388 160 LADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVIIKKLREEH 220 (224)
Q Consensus 160 ~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~~~~~~~~~~~g 220 (224)
.-..+|+|++.-. .+.....+....+.+.|...++....+.. ..+.++..|
T Consensus 68 --~i~~ad~vi~~~~-------~d~~n~~~~~~a~~~~~~~~ii~~~~~~~-~~~~l~~~G 118 (153)
T 1id1_A 68 --GIDRCRAILALSD-------NDADNAFVVLSAKDMSSDVKTVLAVSDSK-NLNKIKMVH 118 (153)
T ss_dssp --TTTTCSEEEECSS-------CHHHHHHHHHHHHHHTSSSCEEEECSSGG-GHHHHHTTC
T ss_pred --ChhhCCEEEEecC-------ChHHHHHHHHHHHHHCCCCEEEEEECCHH-HHHHHHHcC
Confidence 2357888886532 13445555666667777777776654433 233445554
No 406
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=88.49 E-value=7.1 Score=30.02 Aligned_cols=88 Identities=18% Similarity=0.047 Sum_probs=50.1
Q ss_pred eEEEecCCC-chhHHHHHhhcCC--eEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCCC
Q 027388 87 VVLDLACGK-GGDLIKWDKAKIG--YYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADD 163 (224)
Q Consensus 87 ~iLDiGcG~-G~~~~~l~~~~~~--~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 163 (224)
+|.=||+|. |......+..... +|+++|.++..++.+++.-. . .. ...+..+ ..
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~------------~--~~-~~~~~~~--------~~ 59 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGI------------I--DE-GTTSIAK--------VE 59 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTS------------C--SE-EESCGGG--------GG
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCC------------c--cc-ccCCHHH--------Hh
Confidence 567788765 3322222222333 79999999988777653211 0 01 1122211 12
Q ss_pred C-CeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEE
Q 027388 164 A-PFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIG 204 (224)
Q Consensus 164 ~-~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~ 204 (224)
. ..|+|+..- +......++..+...++++.+++.
T Consensus 60 ~~~aDvVilav-------p~~~~~~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 60 DFSPDFVMLSS-------PVRTFREIAKKLSYILSEDATVTD 94 (281)
T ss_dssp GTCCSEEEECS-------CHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred cCCCCEEEEcC-------CHHHHHHHHHHHHhhCCCCcEEEE
Confidence 3 689988653 334556778888888998876654
No 407
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=86.45 E-value=8.1 Score=29.62 Aligned_cols=87 Identities=13% Similarity=0.035 Sum_probs=49.8
Q ss_pred eEEEecCCC-chh-HHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCCCC
Q 027388 87 VVLDLACGK-GGD-LIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDA 164 (224)
Q Consensus 87 ~iLDiGcG~-G~~-~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~ 164 (224)
+|.=||||. |.. +..+. ....+++++|.++..++.+.+.-. . .. ...+..+ . .
T Consensus 2 ~i~iiG~G~~G~~~a~~l~-~~g~~V~~~~~~~~~~~~~~~~g~------------~--~~-~~~~~~~--------~-~ 56 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLR-RRGHYLIGVSRQQSTCEKAVERQL------------V--DE-AGQDLSL--------L-Q 56 (279)
T ss_dssp EEEEECCSHHHHHHHHHHH-HTTCEEEEECSCHHHHHHHHHTTS------------C--SE-EESCGGG--------G-T
T ss_pred EEEEEcCcHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHhCCC------------C--cc-ccCCHHH--------h-C
Confidence 466688765 222 22232 334489999999987776643211 0 01 1122211 2 4
Q ss_pred CeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEe
Q 027388 165 PFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (224)
Q Consensus 165 ~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~ 206 (224)
..|+|+..- +......++..+...++++..++ ++
T Consensus 57 ~~D~vi~av-------~~~~~~~~~~~l~~~~~~~~~vv-~~ 90 (279)
T 2f1k_A 57 TAKIIFLCT-------PIQLILPTLEKLIPHLSPTAIVT-DV 90 (279)
T ss_dssp TCSEEEECS-------CHHHHHHHHHHHGGGSCTTCEEE-EC
T ss_pred CCCEEEEEC-------CHHHHHHHHHHHHhhCCCCCEEE-EC
Confidence 679888653 33456778888888888877554 44
No 408
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=86.37 E-value=2.7 Score=34.98 Aligned_cols=46 Identities=22% Similarity=0.221 Sum_probs=35.5
Q ss_pred hhcCCCeEEEecCC--CchhHHHHHhhcCCeEEEEeCChhHHHHHHHh
Q 027388 81 YARRGDVVLDLACG--KGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTR 126 (224)
Q Consensus 81 ~~~~~~~iLDiGcG--~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~ 126 (224)
...++.+||=.|++ .|..+..+++....++++++.++..++.+++.
T Consensus 217 ~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~l 264 (447)
T 4a0s_A 217 QMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRAL 264 (447)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc
Confidence 35678899999973 36677777766677899999999988888654
No 409
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=86.28 E-value=0.61 Score=38.02 Aligned_cols=100 Identities=10% Similarity=0.071 Sum_probs=53.1
Q ss_pred CCCeEEEecCCC-chhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCC
Q 027388 84 RGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (224)
Q Consensus 84 ~~~~iLDiGcG~-G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (224)
++++|+=+|+|. |..+...+.....+|+++|.++..++.+.+.+. ..+.....+...+. . .
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g-------------~~~~~~~~~~~~l~--~---~ 226 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFG-------------GRVITLTATEANIK--K---S 226 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTT-------------TSEEEEECCHHHHH--H---H
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcC-------------ceEEEecCCHHHHH--H---H
Confidence 468899999853 333333443455689999999988777765432 11211111111111 0 0
Q ss_pred CCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 163 DAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 163 ~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
...+|+|+..-.... ...+.-+.+...+.+++||+++..
T Consensus 227 ~~~~DvVi~~~g~~~----~~~~~li~~~~l~~mk~gg~iV~v 265 (369)
T 2eez_A 227 VQHADLLIGAVLVPG----AKAPKLVTRDMLSLMKEGAVIVDV 265 (369)
T ss_dssp HHHCSEEEECCC-----------CCSCHHHHTTSCTTCEEEEC
T ss_pred HhCCCEEEECCCCCc----cccchhHHHHHHHhhcCCCEEEEE
Confidence 136899886543211 001111245677788999987754
No 410
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=84.99 E-value=4.2 Score=34.19 Aligned_cols=99 Identities=11% Similarity=0.095 Sum_probs=60.6
Q ss_pred CCeEEEecCCCchhHHHHHhh---cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccc-cccc
Q 027388 85 GDVVLDLACGKGGDLIKWDKA---KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHL-DKVL 160 (224)
Q Consensus 85 ~~~iLDiGcG~G~~~~~l~~~---~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~ 160 (224)
..+|+=+||| ..+..+++. ....++.+|.++..++.+...+. +..+++|...... ...
T Consensus 3 ~M~iiI~G~G--~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~---------------~~~i~Gd~~~~~~L~~A- 64 (461)
T 4g65_A 3 AMKIIILGAG--QVGGTLAENLVGENNDITIVDKDGDRLRELQDKYD---------------LRVVNGHASHPDVLHEA- 64 (461)
T ss_dssp CEEEEEECCS--HHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSS---------------CEEEESCTTCHHHHHHH-
T ss_pred cCEEEEECCC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcC---------------cEEEEEcCCCHHHHHhc-
Confidence 3466666665 455555542 44579999999999998877665 7889999876432 111
Q ss_pred CCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCCh
Q 027388 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDA 209 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~ 209 (224)
.-..+|++++.- +.++..-+...+.+.+.+.-..+....+.
T Consensus 65 -gi~~ad~~ia~t-------~~De~Nl~~~~~Ak~~~~~~~~iar~~~~ 105 (461)
T 4g65_A 65 -GAQDADMLVAVT-------NTDETNMAACQVAFTLFNTPNRIARIRSP 105 (461)
T ss_dssp -TTTTCSEEEECC-------SCHHHHHHHHHHHHHHHCCSSEEEECCCH
T ss_pred -CCCcCCEEEEEc-------CChHHHHHHHHHHHHhcCCccceeEeccc
Confidence 346889988642 12333444444555555544455544443
No 411
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=84.88 E-value=4.2 Score=32.51 Aligned_cols=93 Identities=8% Similarity=-0.080 Sum_probs=52.9
Q ss_pred CeEEEe-cCC-CchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccc--ccccC
Q 027388 86 DVVLDL-ACG-KGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHL--DKVLA 161 (224)
Q Consensus 86 ~~iLDi-GcG-~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~--~~~~~ 161 (224)
.+||=. |+| .|..+.++++....++++++.++..++.+++.-. ...+..+-.++.. ....
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga---------------~~~~~~~~~~~~~~v~~~~- 229 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGA---------------AHVLNEKAPDFEATLREVM- 229 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTC---------------SEEEETTSTTHHHHHHHHH-
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC---------------CEEEECCcHHHHHHHHHHh-
Confidence 556543 333 3556666666556699999999999998876432 1122111111100 0000
Q ss_pred CCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
....+|+|+-.-.- . .+....+.|+++|.+++.
T Consensus 230 ~~~g~D~vid~~g~-------~----~~~~~~~~l~~~G~iv~~ 262 (349)
T 3pi7_A 230 KAEQPRIFLDAVTG-------P----LASAIFNAMPKRARWIIY 262 (349)
T ss_dssp HHHCCCEEEESSCH-------H----HHHHHHHHSCTTCEEEEC
T ss_pred cCCCCcEEEECCCC-------h----hHHHHHhhhcCCCEEEEE
Confidence 11479999854321 2 236677899999998864
No 412
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=84.69 E-value=0.39 Score=39.38 Aligned_cols=44 Identities=11% Similarity=0.142 Sum_probs=30.9
Q ss_pred CCCeEEEecCCC-chhHHHHHhhcCCeEEEEeCChhHHHHHHHhc
Q 027388 84 RGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRY 127 (224)
Q Consensus 84 ~~~~iLDiGcG~-G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~ 127 (224)
++++|+=+|+|. |..+...+.....+|+++|.++..++.+.+.+
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~ 211 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF 211 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc
Confidence 578899999854 33333444344558999999998888776643
No 413
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=84.40 E-value=1.4 Score=35.26 Aligned_cols=110 Identities=11% Similarity=-0.005 Sum_probs=62.5
Q ss_pred CCCeEEEecCCC-ch-hHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCC---------CeeEEecccc
Q 027388 84 RGDVVLDLACGK-GG-DLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSF---------PARLICGDCY 152 (224)
Q Consensus 84 ~~~~iLDiGcG~-G~-~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~---------~v~~~~~d~~ 152 (224)
...+|.=||+|+ |. ++..++ .....|+.+|+++..++.+.+++...-..-.+...+.. ++.+ ..|+.
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a-~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~-~~~l~ 82 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFA-SGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTNLA 82 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHH-HTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECCHH
T ss_pred CCCeEEEECCcHHHHHHHHHHH-hCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhccc-ccchH
Confidence 346788899986 32 233333 34558999999999888776655311000000000110 1111 11211
Q ss_pred ccccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCC
Q 027388 153 EVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (224)
Q Consensus 153 ~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~ 208 (224)
+ .....|+|+ +-+++..+-..++++++-++++|+.+|.-+|..
T Consensus 83 ~--------a~~~ad~Vi-----Eav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSs 125 (319)
T 3ado_A 83 E--------AVEGVVHIQ-----ECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC 125 (319)
T ss_dssp H--------HTTTEEEEE-----ECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS
T ss_pred h--------HhccCcEEe-----eccccHHHHHHHHHHHHHHHhhhcceeehhhhh
Confidence 1 124677776 333445578899999999999999988876553
No 414
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=84.09 E-value=12 Score=28.33 Aligned_cols=108 Identities=13% Similarity=0.093 Sum_probs=63.6
Q ss_pred CCCeEEEecCCCchhHHHHHh---hcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccc-c
Q 027388 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK-V 159 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~---~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~-~ 159 (224)
.++++|=.|++.| ++..+++ ....+|+.++.++..++...+.+. .++.++.+|+.+..... .
T Consensus 7 ~gk~~lVTGas~g-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-------------~~~~~~~~Dv~~~~~v~~~ 72 (255)
T 4eso_A 7 QGKKAIVIGGTHG-MGLATVRRLVEGGAEVLLTGRNESNIARIREEFG-------------PRVHALRSDIADLNEIAVL 72 (255)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-------------GGEEEEECCTTCHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-------------CcceEEEccCCCHHHHHHH
Confidence 5678888887665 5554443 245689999999887776655432 24788899987643110 0
Q ss_pred ----cCCCCCeeEEEEcccccccc----CCHHHHH-----------HHHHHHHhhccCCeEEEEE
Q 027388 160 ----LADDAPFDICSCQFAMHYSW----STEARAR-----------RALANVSALLRPGGTFIGT 205 (224)
Q Consensus 160 ----~~~~~~~D~i~~~~~l~~~~----~~~~~~~-----------~~l~~~~~~lk~gG~li~~ 205 (224)
....+..|+++.+-.+...- .+.++.. .+++.+...++++|.++..
T Consensus 73 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~i 137 (255)
T 4eso_A 73 GAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFT 137 (255)
T ss_dssp HHHHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred HHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 00125799998765332110 0333332 2345566667778877754
No 415
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=83.92 E-value=0.46 Score=38.66 Aligned_cols=45 Identities=18% Similarity=0.089 Sum_probs=31.2
Q ss_pred CCCeEEEecCCC-chhHHHHHhhcCCeEEEEeCChhHHHHHHHhcc
Q 027388 84 RGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYN 128 (224)
Q Consensus 84 ~~~~iLDiGcG~-G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~ 128 (224)
++.+|+=+|+|. |..+..++.....+|+++|.++..++.+.+...
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~ 211 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG 211 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhC
Confidence 357899999854 334444444444589999999988888766543
No 416
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=83.91 E-value=7.6 Score=25.99 Aligned_cols=108 Identities=11% Similarity=-0.015 Sum_probs=55.0
Q ss_pred CCeEEEecCCCchhHHHHHh---hcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccc-ccccc
Q 027388 85 GDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH-LDKVL 160 (224)
Q Consensus 85 ~~~iLDiGcG~G~~~~~l~~---~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~ 160 (224)
.++|+=+|+| ..+..++. ....+++++|.++..++.+++. ...++.+|..+.. +...
T Consensus 6 ~~~v~I~G~G--~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~----------------~~~~~~~d~~~~~~l~~~- 66 (144)
T 2hmt_A 6 NKQFAVIGLG--RFGGSIVKELHRMGHEVLAVDINEEKVNAYASY----------------ATHAVIANATEENELLSL- 66 (144)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTT----------------CSEEEECCTTCHHHHHTT-
T ss_pred CCcEEEECCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----------------CCEEEEeCCCCHHHHHhc-
Confidence 4578888874 44444432 3445799999987654433211 1345666654321 1000
Q ss_pred CCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCChHHHHHHhhhcc
Q 027388 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVIIKKLREEH 220 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~~~~~~~~~~~g 220 (224)
....+|+|+..-... ......+....+.+.+. .++....+... .+.+++.|
T Consensus 67 -~~~~~d~vi~~~~~~------~~~~~~~~~~~~~~~~~-~ii~~~~~~~~-~~~l~~~g 117 (144)
T 2hmt_A 67 -GIRNFEYVIVAIGAN------IQASTLTTLLLKELDIP-NIWVKAQNYYH-HKVLEKIG 117 (144)
T ss_dssp -TGGGCSEEEECCCSC------HHHHHHHHHHHHHTTCS-EEEEECCSHHH-HHHHHHHT
T ss_pred -CCCCCCEEEECCCCc------hHHHHHHHHHHHHcCCC-eEEEEeCCHHH-HHHHHHcC
Confidence 135789988654211 12222334444455665 66655544432 34555555
No 417
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=83.34 E-value=2.9 Score=35.59 Aligned_cols=89 Identities=11% Similarity=-0.068 Sum_probs=53.6
Q ss_pred hcCCCeEEEecCCC-chhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccccc
Q 027388 82 ARRGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (224)
Q Consensus 82 ~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (224)
...+++|+=+|+|. |......++....+|+++|.++...+.+.+.- +.+ .++.+.
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~G----------------a~~--~~l~e~------ 326 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEG----------------FDV--VTVEEA------ 326 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT----------------CEE--CCHHHH------
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC----------------CEE--ecHHHH------
Confidence 35788999999865 44444444445568999999998777665431 111 122111
Q ss_pred CCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
...+|+|+..-.-.+++ -....+.+++||+++..
T Consensus 327 --l~~aDvVi~atgt~~~i---------~~~~l~~mk~ggilvnv 360 (494)
T 3ce6_A 327 --IGDADIVVTATGNKDII---------MLEHIKAMKDHAILGNI 360 (494)
T ss_dssp --GGGCSEEEECSSSSCSB---------CHHHHHHSCTTCEEEEC
T ss_pred --HhCCCEEEECCCCHHHH---------HHHHHHhcCCCcEEEEe
Confidence 14689998753222210 12456778999988754
No 418
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=82.79 E-value=13 Score=28.41 Aligned_cols=111 Identities=15% Similarity=0.083 Sum_probs=62.9
Q ss_pred CCCeEEEecCCCchhHHHHHh---hcCCeEEEEeCC------------hhHHHHHHHhccCCcccccccccCCCCeeEEe
Q 027388 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIA------------EGSIEDCRTRYNGDADHHQRRKKFSFPARLIC 148 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~---~~~~~~~gvD~s------------~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~ 148 (224)
.++++|=.|++.| ++..+++ ....+|+.+|.+ ...++.+...+. ....++.++.
T Consensus 9 ~gk~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~ 77 (287)
T 3pxx_A 9 QDKVVLVTGGARG-QGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVE----------KTGRKAYTAE 77 (287)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHH----------HTTSCEEEEE
T ss_pred CCCEEEEeCCCCh-HHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHH----------hcCCceEEEE
Confidence 5678888887765 5554443 345689999987 555555444433 1234588899
Q ss_pred ccccccccc-ccc----CCCCCeeEEEEccccccc--cCCHHHHH-----------HHHHHHHhhccCCeEEEEE
Q 027388 149 GDCYEVHLD-KVL----ADDAPFDICSCQFAMHYS--WSTEARAR-----------RALANVSALLRPGGTFIGT 205 (224)
Q Consensus 149 ~d~~~~~~~-~~~----~~~~~~D~i~~~~~l~~~--~~~~~~~~-----------~~l~~~~~~lk~gG~li~~ 205 (224)
+|+.+...- ... ..-+..|+++.+-.+... ..+.++.. .+++.+...++.+|.++..
T Consensus 78 ~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 152 (287)
T 3pxx_A 78 VDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITT 152 (287)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEe
Confidence 998764311 000 011478999876543221 01223332 2445566677778877754
No 419
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=82.29 E-value=12 Score=29.52 Aligned_cols=106 Identities=10% Similarity=-0.016 Sum_probs=64.6
Q ss_pred CCeEEEecCCCchhHHHHHhh---cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccc-cccc
Q 027388 85 GDVVLDLACGKGGDLIKWDKA---KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHL-DKVL 160 (224)
Q Consensus 85 ~~~iLDiGcG~G~~~~~l~~~---~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~ 160 (224)
...++=+|+ |..+..+++. ... ++.+|.+++.++ ++.. .+.++.+|..+... ...
T Consensus 115 ~~~viI~G~--G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~~----------------~~~~i~gd~~~~~~L~~a- 173 (336)
T 1lnq_A 115 SRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKK-VLRS----------------GANFVHGDPTRVSDLEKA- 173 (336)
T ss_dssp -CEEEEESC--CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHHT----------------TCEEEESCTTSHHHHHHT-
T ss_pred cCCEEEECC--cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHhC----------------CcEEEEeCCCCHHHHHhc-
Confidence 456777776 5666666542 334 889999998888 5431 26789999875432 111
Q ss_pred CCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCChHHHHHHhhhcc
Q 027388 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVIIKKLREEH 220 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~~~~~~~~~~~g 220 (224)
....+|.+++.. +.+...-......+.+.|...++....+... .+.+++.|
T Consensus 174 -~i~~a~~vi~~~-------~~d~~n~~~~~~ar~~~~~~~iiar~~~~~~-~~~l~~~G 224 (336)
T 1lnq_A 174 -NVRGARAVIVDL-------ESDSETIHCILGIRKIDESVRIIAEAERYEN-IEQLRMAG 224 (336)
T ss_dssp -CSTTEEEEEECC-------SSHHHHHHHHHHHHTTCTTSEEEEECSSGGG-HHHHHHTT
T ss_pred -ChhhccEEEEcC-------CccHHHHHHHHHHHHHCCCCeEEEEECCHHH-HHHHHHcC
Confidence 346889888753 1233444455566677787777776655443 24444444
No 420
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=81.82 E-value=0.55 Score=38.55 Aligned_cols=42 Identities=21% Similarity=0.193 Sum_probs=31.7
Q ss_pred CCCeEEEecCCC-chhHHHHHhhcCCeEEEEeCChhHHHHHHH
Q 027388 84 RGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRT 125 (224)
Q Consensus 84 ~~~~iLDiGcG~-G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~ 125 (224)
++.+|+=+|+|. |..+..++.....+|+++|.++..++.+.+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~ 225 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS 225 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 568999999986 444445554455689999999988888865
No 421
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=81.81 E-value=15 Score=27.80 Aligned_cols=112 Identities=5% Similarity=-0.065 Sum_probs=63.2
Q ss_pred CCCeEEEecCC--CchhHHHHHh---hcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccc-
Q 027388 84 RGDVVLDLACG--KGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD- 157 (224)
Q Consensus 84 ~~~~iLDiGcG--~G~~~~~l~~---~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~- 157 (224)
.++++|=.|++ .| ++..+++ ....+|+.++.+....+.+.+..... ...++.++.+|+.+...-
T Consensus 6 ~~k~vlVTGasg~~G-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---------~~~~~~~~~~D~~~~~~v~ 75 (266)
T 3oig_A 6 EGRNIVVMGVANKRS-IAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTL---------DRNDSIILPCDVTNDAEIE 75 (266)
T ss_dssp TTCEEEEECCCSTTS-HHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTS---------SSCCCEEEECCCSSSHHHH
T ss_pred CCCEEEEEcCCCCCc-HHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhc---------CCCCceEEeCCCCCHHHHH
Confidence 46788888876 33 4433332 34568999998876666555544311 122588899998764311
Q ss_pred ccc----CCCCCeeEEEEcccccc-------c-cCCHHHHH-----------HHHHHHHhhccCCeEEEEE
Q 027388 158 KVL----ADDAPFDICSCQFAMHY-------S-WSTEARAR-----------RALANVSALLRPGGTFIGT 205 (224)
Q Consensus 158 ~~~----~~~~~~D~i~~~~~l~~-------~-~~~~~~~~-----------~~l~~~~~~lk~gG~li~~ 205 (224)
... ...+.+|+++.+-.+.. + ..+.++.. .+++.+...++++|.++..
T Consensus 76 ~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~i 146 (266)
T 3oig_A 76 TCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTL 146 (266)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEE
T ss_pred HHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEE
Confidence 000 01247899887654321 0 01333332 2455667777788877764
No 422
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=81.11 E-value=16 Score=28.23 Aligned_cols=111 Identities=15% Similarity=0.088 Sum_probs=62.3
Q ss_pred CCCeEEEecCCCchhHHHHHh---hcCCeEEEEeCChhH-HHHHHHhccCCcccccccccCCCCeeEEeccccccccc-c
Q 027388 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGS-IEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD-K 158 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~---~~~~~~~gvD~s~~~-~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~ 158 (224)
.++++|=.|++.| ++..+++ ....+|+.++.+... .+...+... ....++.++.+|+.+.... .
T Consensus 46 ~gk~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~----------~~~~~~~~~~~Dv~d~~~v~~ 114 (291)
T 3ijr_A 46 KGKNVLITGGDSG-IGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVE----------KEGVKCVLLPGDLSDEQHCKD 114 (291)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH----------TTTCCEEEEESCTTSHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHH----------hcCCcEEEEECCCCCHHHHHH
Confidence 5678888887765 5554443 245689999987653 333333332 2244588899998764310 0
Q ss_pred ----ccCCCCCeeEEEEcccccccc-----CCHHHH-----------HHHHHHHHhhccCCeEEEEE
Q 027388 159 ----VLADDAPFDICSCQFAMHYSW-----STEARA-----------RRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 159 ----~~~~~~~~D~i~~~~~l~~~~-----~~~~~~-----------~~~l~~~~~~lk~gG~li~~ 205 (224)
.....+..|+++.+-...... .+.++. ..+++.+...++.+|.++..
T Consensus 115 ~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~i 181 (291)
T 3ijr_A 115 IVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINT 181 (291)
T ss_dssp HHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred HHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEE
Confidence 000124789999764322110 023333 23455666777788877764
No 423
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=80.47 E-value=0.81 Score=37.52 Aligned_cols=42 Identities=19% Similarity=0.146 Sum_probs=30.5
Q ss_pred CCCeEEEecCCC-chhHHHHHhhcCCeEEEEeCChhHHHHHHH
Q 027388 84 RGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRT 125 (224)
Q Consensus 84 ~~~~iLDiGcG~-G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~ 125 (224)
++.+|+=+|+|. |..+..++.....+|+.+|.++...+.++.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVES 213 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 578999999875 444444544455689999999887777755
No 424
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=79.71 E-value=8.9 Score=29.96 Aligned_cols=88 Identities=14% Similarity=0.075 Sum_probs=50.5
Q ss_pred CCCeEEEecCCC-chhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEe-ccccccccccccC
Q 027388 84 RGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLIC-GDCYEVHLDKVLA 161 (224)
Q Consensus 84 ~~~~iLDiGcG~-G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~-~d~~~~~~~~~~~ 161 (224)
.+++|+=||+|. |......+.....+++++|.+....+.+.+. . +.... .++.+
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~-g---------------~~~~~~~~l~~-------- 211 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITEM-G---------------LVPFHTDELKE-------- 211 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT-T---------------CEEEEGGGHHH--------
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC-C---------------CeEEchhhHHH--------
Confidence 578999999865 3333333333455899999998655444321 1 22211 12111
Q ss_pred CCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
....+|+|+..-..+.+ .. .....+++|++++-.
T Consensus 212 ~l~~aDvVi~~~p~~~i--~~--------~~~~~mk~g~~lin~ 245 (300)
T 2rir_A 212 HVKDIDICINTIPSMIL--NQ--------TVLSSMTPKTLILDL 245 (300)
T ss_dssp HSTTCSEEEECCSSCCB--CH--------HHHTTSCTTCEEEEC
T ss_pred HhhCCCEEEECCChhhh--CH--------HHHHhCCCCCEEEEE
Confidence 13578999987666443 21 244678888877644
No 425
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=79.60 E-value=15 Score=28.69 Aligned_cols=90 Identities=16% Similarity=0.073 Sum_probs=51.1
Q ss_pred CCeEEEecCCC-ch-hHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCC
Q 027388 85 GDVVLDLACGK-GG-DLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (224)
Q Consensus 85 ~~~iLDiGcG~-G~-~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (224)
..+|.=||+|. |. ++..++ ....+|+++|.++..++.+.+.-. .....+..+.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~-~~G~~V~~~dr~~~~~~~~~~~g~----------------~~~~~~~~e~-------- 61 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCL-RAGLSTWGADLNPQACANLLAEGA----------------CGAAASAREF-------- 61 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HTTCEEEEECSCHHHHHHHHHTTC----------------SEEESSSTTT--------
T ss_pred CCeEEEECCCHHHHHHHHHHH-HCCCeEEEEECCHHHHHHHHHcCC----------------ccccCCHHHH--------
Confidence 35788888775 22 222222 344589999999988777654311 1112222221
Q ss_pred CCCeeEEEEccccccccCCHHHHHHHH---HHHHhhccCCeEEEEE
Q 027388 163 DAPFDICSCQFAMHYSWSTEARARRAL---ANVSALLRPGGTFIGT 205 (224)
Q Consensus 163 ~~~~D~i~~~~~l~~~~~~~~~~~~~l---~~~~~~lk~gG~li~~ 205 (224)
....|+|+..-. .......++ ..+...+++|..++-.
T Consensus 62 ~~~aDvvi~~vp------~~~~~~~v~~~~~~l~~~l~~g~ivv~~ 101 (303)
T 3g0o_A 62 AGVVDALVILVV------NAAQVRQVLFGEDGVAHLMKPGSAVMVS 101 (303)
T ss_dssp TTTCSEEEECCS------SHHHHHHHHC--CCCGGGSCTTCEEEEC
T ss_pred HhcCCEEEEECC------CHHHHHHHHhChhhHHhhCCCCCEEEec
Confidence 246788886532 223445555 5667778887766643
No 426
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=79.58 E-value=9.7 Score=29.65 Aligned_cols=89 Identities=15% Similarity=0.018 Sum_probs=50.4
Q ss_pred CCCeEEEecCCC-chhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCC
Q 027388 84 RGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (224)
Q Consensus 84 ~~~~iLDiGcG~-G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (224)
.+++|+=+|+|. |......+.....+++++|.+....+.+.+. . +.+.. ...+.. .
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~-g---------------~~~~~--~~~l~~-----~ 210 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAEM-G---------------MEPFH--ISKAAQ-----E 210 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT-T---------------SEEEE--GGGHHH-----H
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHC-C---------------CeecC--hhhHHH-----H
Confidence 578999999875 3333333333445899999998665544321 1 22221 111111 1
Q ss_pred CCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 163 DAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 163 ~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
...+|+|+..-..+.+ .. .....+++|++++-.
T Consensus 211 l~~aDvVi~~~p~~~i--~~--------~~l~~mk~~~~lin~ 243 (293)
T 3d4o_A 211 LRDVDVCINTIPALVV--TA--------NVLAEMPSHTFVIDL 243 (293)
T ss_dssp TTTCSEEEECCSSCCB--CH--------HHHHHSCTTCEEEEC
T ss_pred hcCCCEEEECCChHHh--CH--------HHHHhcCCCCEEEEe
Confidence 3578999987655433 21 234567898877754
No 427
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=79.14 E-value=13 Score=28.70 Aligned_cols=117 Identities=13% Similarity=0.062 Sum_probs=60.3
Q ss_pred CeEEEecCCC-chhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccc-cCC--------CCeeEEeccccccc
Q 027388 86 DVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRK-KFS--------FPARLICGDCYEVH 155 (224)
Q Consensus 86 ~~iLDiGcG~-G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~-~~~--------~~v~~~~~d~~~~~ 155 (224)
.+|.=||+|. |.-....+.....+|+++|.++..++.+.+.+........+.. .+. .++.+ ..++.+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~~-- 81 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLAQ-- 81 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHHH--
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHHH--
Confidence 4677788765 2222222223455899999999998887765320000000000 000 00111 122111
Q ss_pred cccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEe--CChHHHHHHh
Q 027388 156 LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM--PDANVIIKKL 216 (224)
Q Consensus 156 ~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~--~~~~~~~~~~ 216 (224)
.....|+|+..-. ...+....++.++...++++.+++-.+ .....+...+
T Consensus 82 ------~~~~aDlVi~av~-----~~~~~~~~v~~~l~~~~~~~~il~s~tS~~~~~~la~~~ 133 (283)
T 4e12_A 82 ------AVKDADLVIEAVP-----ESLDLKRDIYTKLGELAPAKTIFATNSSTLLPSDLVGYT 133 (283)
T ss_dssp ------HTTTCSEEEECCC-----SCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHHHH
T ss_pred ------HhccCCEEEEecc-----CcHHHHHHHHHHHHhhCCCCcEEEECCCCCCHHHHHhhc
Confidence 1256899886432 233466778899999999988766332 2334444444
No 428
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=78.93 E-value=17 Score=27.56 Aligned_cols=89 Identities=10% Similarity=0.077 Sum_probs=51.2
Q ss_pred CCeEEEecCCC-chh-HHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCC
Q 027388 85 GDVVLDLACGK-GGD-LIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (224)
Q Consensus 85 ~~~iLDiGcG~-G~~-~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (224)
+.+|.=||||. |.. +..+...+...++++|.++...+.+.+... +.. ..+..+.
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g---------------~~~-~~~~~~~-------- 65 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVE---------------AEY-TTDLAEV-------- 65 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTT---------------CEE-ESCGGGS--------
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcC---------------Cce-eCCHHHH--------
Confidence 35788899874 332 222332333238899999987776655432 221 2222211
Q ss_pred CCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEE
Q 027388 163 DAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIG 204 (224)
Q Consensus 163 ~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~ 204 (224)
....|+|+..- +......++..+...+++|..++-
T Consensus 66 ~~~~Dvvi~av-------~~~~~~~v~~~l~~~~~~~~ivv~ 100 (266)
T 3d1l_A 66 NPYAKLYIVSL-------KDSAFAELLQGIVEGKREEALMVH 100 (266)
T ss_dssp CSCCSEEEECC-------CHHHHHHHHHHHHTTCCTTCEEEE
T ss_pred hcCCCEEEEec-------CHHHHHHHHHHHHhhcCCCcEEEE
Confidence 24689988653 234456777788777877765554
No 429
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=78.86 E-value=20 Score=27.63 Aligned_cols=103 Identities=9% Similarity=-0.056 Sum_probs=53.3
Q ss_pred CeEEEecCCC-chhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCCCC
Q 027388 86 DVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDA 164 (224)
Q Consensus 86 ~~iLDiGcG~-G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~ 164 (224)
.+|.=||+|. |......+.....+|+++|.++..++..++.... ...... .....+......+......
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~-------~~~~~~---~~~~~~~~~~~~~~~~~~~ 73 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLI-------ADFNGE---EVVANLPIFSPEEIDHQNE 73 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEE-------EEETTE---EEEECCCEECGGGCCTTSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEE-------EEeCCC---eeEecceeecchhhcccCC
Confidence 4688888875 3222222223445899999999877776654210 000000 0001111000000000113
Q ss_pred CeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 165 PFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 165 ~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
.+|+|+..- +......++..+...++++..++..
T Consensus 74 ~~d~vi~~v-------~~~~~~~v~~~l~~~l~~~~~iv~~ 107 (316)
T 2ew2_A 74 QVDLIIALT-------KAQQLDAMFKAIQPMITEKTYVLCL 107 (316)
T ss_dssp CCSEEEECS-------CHHHHHHHHHHHGGGCCTTCEEEEC
T ss_pred CCCEEEEEe-------ccccHHHHHHHHHHhcCCCCEEEEe
Confidence 789988654 2345677888888888887765543
No 430
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=78.83 E-value=18 Score=27.88 Aligned_cols=85 Identities=16% Similarity=0.180 Sum_probs=49.8
Q ss_pred CeEEEecC-CC-chhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCCC
Q 027388 86 DVVLDLAC-GK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADD 163 (224)
Q Consensus 86 ~~iLDiGc-G~-G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 163 (224)
.+|.=||+ |. |......+.....+++++|.++..++.+.+. + +.. .+..+ ..
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~--------------g--~~~--~~~~~--------~~ 65 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGM--------------G--IPL--TDGDG--------WI 65 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHT--------------T--CCC--CCSSG--------GG
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhc--------------C--CCc--CCHHH--------Hh
Confidence 47888988 75 3322222223445899999998777666541 1 111 12111 12
Q ss_pred CCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEE
Q 027388 164 APFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFI 203 (224)
Q Consensus 164 ~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li 203 (224)
...|+|+..- +......++..+...+++|..++
T Consensus 66 ~~aDvVi~av-------~~~~~~~v~~~l~~~l~~~~ivv 98 (286)
T 3c24_A 66 DEADVVVLAL-------PDNIIEKVAEDIVPRVRPGTIVL 98 (286)
T ss_dssp GTCSEEEECS-------CHHHHHHHHHHHGGGSCTTCEEE
T ss_pred cCCCEEEEcC-------CchHHHHHHHHHHHhCCCCCEEE
Confidence 4689988653 23446777888888888776544
No 431
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=78.75 E-value=25 Score=28.59 Aligned_cols=99 Identities=16% Similarity=0.164 Sum_probs=60.9
Q ss_pred CCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCCC
Q 027388 84 RGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADD 163 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 163 (224)
.+.+||.++-+-|.+...+. ....++.+.-|.......+.+ ++. +.. .+ .... ..
T Consensus 45 ~~~~~l~~n~~~g~~~~~~~--~~~~~~~~~~~~~~~~~l~~~------------~~~--~~~--~~--~~~~-----~~ 99 (381)
T 3dmg_A 45 FGERALDLNPGVGWGSLPLE--GRMAVERLETSRAAFRCLTAS------------GLQ--ARL--AL--PWEA-----AA 99 (381)
T ss_dssp CSSEEEESSCTTSTTTGGGB--TTBEEEEEECBHHHHHHHHHT------------TCC--CEE--CC--GGGS-----CT
T ss_pred hCCcEEEecCCCCccccccC--CCCceEEEeCcHHHHHHHHHc------------CCC--ccc--cC--CccC-----Cc
Confidence 45689999999997665542 235677776666555443332 111 211 11 1111 35
Q ss_pred CCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCChH
Q 027388 164 APFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDAN 210 (224)
Q Consensus 164 ~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~~ 210 (224)
..||+|+....=. .........|..+.+.|++||.+++.-.+..
T Consensus 100 ~~~d~v~~~~Pk~---k~~~~~~~~l~~~~~~l~~g~~i~~~g~~~~ 143 (381)
T 3dmg_A 100 GAYDLVVLALPAG---RGTAYVQASLVAAARALRMGGRLYLAGDKNK 143 (381)
T ss_dssp TCEEEEEEECCGG---GCHHHHHHHHHHHHHHEEEEEEEEEEEEGGG
T ss_pred CCCCEEEEECCcc---hhHHHHHHHHHHHHHhCCCCCEEEEEEccHH
Confidence 7899998654321 0224578889999999999999988765443
No 432
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=78.39 E-value=19 Score=30.20 Aligned_cols=107 Identities=13% Similarity=0.120 Sum_probs=58.1
Q ss_pred CeEEEecCCC-ch-hHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCccc---ccc--cccCCCCeeEEecccccccccc
Q 027388 86 DVVLDLACGK-GG-DLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADH---HQR--RKKFSFPARLICGDCYEVHLDK 158 (224)
Q Consensus 86 ~~iLDiGcG~-G~-~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~---~~~--~~~~~~~v~~~~~d~~~~~~~~ 158 (224)
.+|.=||+|. |. ++..++ .....|+++|.++..++.+++.....-.. ... ..........+..|..
T Consensus 38 ~kV~VIGaG~MG~~iA~~la-~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~------ 110 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFA-RVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTK------ 110 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCGG------
T ss_pred CEEEEECcCHHHHHHHHHHH-hCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCHH------
Confidence 5688899886 33 333333 34458999999999888776532200000 000 0000000111122321
Q ss_pred ccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeC
Q 027388 159 VLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (224)
Q Consensus 159 ~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~ 207 (224)
....+|+|+..-. . ...-...++.++...++++.+++.++.
T Consensus 111 ---~~~~aDlVIeaVp-e----~~~~k~~v~~~l~~~~~~~~ii~snTs 151 (463)
T 1zcj_A 111 ---ELSTVDLVVEAVF-E----DMNLKKKVFAELSALCKPGAFLCTNTS 151 (463)
T ss_dssp ---GGTTCSEEEECCC-S----CHHHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred ---HHCCCCEEEEcCC-C----CHHHHHHHHHHHHhhCCCCeEEEeCCC
Confidence 1246899886432 2 224456788889999999888776554
No 433
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=77.76 E-value=3.2 Score=33.23 Aligned_cols=96 Identities=18% Similarity=0.085 Sum_probs=51.6
Q ss_pred hhcCCCeEEEecCC--CchhHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccc
Q 027388 81 YARRGDVVLDLACG--KGGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD 157 (224)
Q Consensus 81 ~~~~~~~iLDiGcG--~G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 157 (224)
...++.+||=.|++ .|..+.++++.. ...+++++ ++...+.++ .-. ..++..+ .++...
T Consensus 139 ~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-~ga---------------~~~~~~~-~~~~~~ 200 (349)
T 4a27_A 139 NLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-DSV---------------THLFDRN-ADYVQE 200 (349)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-GGS---------------SEEEETT-SCHHHH
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-cCC---------------cEEEcCC-ccHHHH
Confidence 45678999999983 366777776543 46888888 665566554 211 1122111 111000
Q ss_pred cccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 158 KVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 158 ~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
......+.+|+|+-.-.- + .+....+.|+++|.+++.
T Consensus 201 ~~~~~~~g~Dvv~d~~g~-------~----~~~~~~~~l~~~G~~v~~ 237 (349)
T 4a27_A 201 VKRISAEGVDIVLDCLCG-------D----NTGKGLSLLKPLGTYILY 237 (349)
T ss_dssp HHHHCTTCEEEEEEECC------------------CTTEEEEEEEEEE
T ss_pred HHHhcCCCceEEEECCCc-------h----hHHHHHHHhhcCCEEEEE
Confidence 000023589999853211 1 125678999999998864
No 434
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=77.06 E-value=23 Score=27.21 Aligned_cols=88 Identities=13% Similarity=0.027 Sum_probs=50.8
Q ss_pred CeEEEecCCC-ch-hHHHHHhhc-CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCC
Q 027388 86 DVVLDLACGK-GG-DLIKWDKAK-IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (224)
Q Consensus 86 ~~iLDiGcG~-G~-~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (224)
.+|.=||+|. |. ++..+...+ ..+++++|.++..++.+.+.-. ......+..+.
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~---------------~~~~~~~~~~~-------- 63 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGI---------------VDEATADFKVF-------- 63 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTS---------------CSEEESCTTTT--------
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCC---------------cccccCCHHHh--------
Confidence 5688888876 22 223333332 4589999999887776654211 10112222111
Q ss_pred CCCeeEEEEccccccccCCHHHHHHHHHHHHhh-ccCCeEEE
Q 027388 163 DAPFDICSCQFAMHYSWSTEARARRALANVSAL-LRPGGTFI 203 (224)
Q Consensus 163 ~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~-lk~gG~li 203 (224)
....|+|+..- +......++..+... ++++.+++
T Consensus 64 ~~~aDvVilav-------p~~~~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 64 AALADVIILAV-------PIKKTIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp GGGCSEEEECS-------CHHHHHHHHHHHHTSCCCTTCEEE
T ss_pred hcCCCEEEEcC-------CHHHHHHHHHHHHhcCCCCCCEEE
Confidence 24679888653 234457778888887 88876655
No 435
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=76.59 E-value=18 Score=29.34 Aligned_cols=110 Identities=10% Similarity=-0.025 Sum_probs=67.6
Q ss_pred CCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCC-CeeEEeccccccccccccCC
Q 027388 84 RGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSF-PARLICGDCYEVHLDKVLAD 162 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~-~v~~~~~d~~~~~~~~~~~~ 162 (224)
.+.+||.++.+.|.++..++.. .++.+.-|--.....+.++.. .++.. .+++... ... .
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~---~~~~~~ds~~~~~~~~~n~~~--------~~~~~~~~~~~~~-~~~--------~ 97 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH---KPYSIGDSYISELATRENLRL--------NGIDESSVKFLDS-TAD--------Y 97 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG---CCEEEESCHHHHHHHHHHHHH--------TTCCGGGSEEEET-TSC--------C
T ss_pred CCCCEEEECCCCCHHHHhhccC---CceEEEhHHHHHHHHHHHHHH--------cCCCccceEeccc-ccc--------c
Confidence 4568999999999998877532 334443355444555555542 22222 2333221 111 3
Q ss_pred CCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCCh---HHHHHHhhh
Q 027388 163 DAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDA---NVIIKKLRE 218 (224)
Q Consensus 163 ~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~---~~~~~~~~~ 218 (224)
...||+|+.... .+.......|..+...|++|+.+++...+. ..+.+.|.+
T Consensus 98 ~~~~~~v~~~lp-----k~~~~l~~~L~~l~~~l~~~~~i~~~g~~~~~~~~~~~~l~~ 151 (375)
T 4dcm_A 98 PQQPGVVLIKVP-----KTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEK 151 (375)
T ss_dssp CSSCSEEEEECC-----SCHHHHHHHHHHHHTTCCTTSEEEEEEEGGGCCHHHHHHHHH
T ss_pred ccCCCEEEEEcC-----CCHHHHHHHHHHHHhhCCCCCEEEEEecccchHHHHHHHHHh
Confidence 568999886443 345778889999999999999988765443 334444443
No 436
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=76.46 E-value=21 Score=28.06 Aligned_cols=114 Identities=9% Similarity=-0.032 Sum_probs=56.4
Q ss_pred CCCeEEEecCCC-ch-hHHHHHhh-cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccccc
Q 027388 84 RGDVVLDLACGK-GG-DLIKWDKA-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (224)
Q Consensus 84 ~~~~iLDiGcG~-G~-~~~~l~~~-~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (224)
+..+|.=||+|. |. ++..++.. ...+++.+|+++.....+..... -...+++. ..|...
T Consensus 13 ~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~----------~~~~~i~~-t~d~~~------- 74 (303)
T 2i6t_A 13 TVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEI----------FNLPNVEI-SKDLSA------- 74 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHH----------HTCTTEEE-ESCGGG-------
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhh----------hcCCCeEE-eCCHHH-------
Confidence 346899999985 32 33333333 33479999999853223322211 00113443 244322
Q ss_pred CCCCCeeEEEEccccc--------cccCCHHHHHHHHHHHHhhccCCeEEEEEeCChHHHHHHhhh
Q 027388 161 ADDAPFDICSCQFAMH--------YSWSTEARARRALANVSALLRPGGTFIGTMPDANVIIKKLRE 218 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~--------~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~~~~~~~~~~ 218 (224)
-...|+|+...... .+....+-...++..+.+.. |++++++.+-..+.+-..+.+
T Consensus 75 --l~~aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~sNP~~~~t~~~~~ 137 (303)
T 2i6t_A 75 --SAHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLVASQPVEIMTYVTWK 137 (303)
T ss_dssp --GTTCSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEECSSSHHHHHHHHHH
T ss_pred --HCCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEcCChHHHHHHHHHH
Confidence 25689998764111 00001133566677777775 899887755333444444443
No 437
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=76.30 E-value=21 Score=28.04 Aligned_cols=100 Identities=8% Similarity=-0.090 Sum_probs=53.5
Q ss_pred CCCeEEEecCCC-chhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccc-ccccccC
Q 027388 84 RGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV-HLDKVLA 161 (224)
Q Consensus 84 ~~~~iLDiGcG~-G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~~ 161 (224)
...+|.=||+|. |......+.....+|+.+ .++..++..++.-.. ... ....+. ..+... +..
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~-------~~~--~~~~~~-~~~~~~~~~~---- 82 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEATGLR-------LET--QSFDEQ-VKVSASSDPS---- 82 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEE-------EEC--SSCEEE-ECCEEESCGG----
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeE-------EEc--CCCcEE-EeeeeeCCHH----
Confidence 456899999886 332222222345588888 888777777654210 000 001110 011000 010
Q ss_pred CCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE
Q 027388 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~ 205 (224)
....+|+|+..-- ......++..+...++++..++..
T Consensus 83 ~~~~~D~vilavk-------~~~~~~~l~~l~~~l~~~~~iv~~ 119 (318)
T 3hwr_A 83 AVQGADLVLFCVK-------STDTQSAALAMKPALAKSALVLSL 119 (318)
T ss_dssp GGTTCSEEEECCC-------GGGHHHHHHHHTTTSCTTCEEEEE
T ss_pred HcCCCCEEEEEcc-------cccHHHHHHHHHHhcCCCCEEEEe
Confidence 1257899886532 234577888898899888766554
No 438
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=75.76 E-value=10 Score=29.35 Aligned_cols=87 Identities=5% Similarity=-0.036 Sum_probs=49.8
Q ss_pred CeEEEecCCC-ch-hHHHHHhhc--CCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccC
Q 027388 86 DVVLDLACGK-GG-DLIKWDKAK--IGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 86 ~~iLDiGcG~-G~-~~~~l~~~~--~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (224)
.+|.=||||. |. ++..+...+ ...++.+|.++..++.+.+... +.. ..+..+.
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~g---------------i~~-~~~~~~~------- 60 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCG---------------VHT-TQDNRQG------- 60 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTC---------------CEE-ESCHHHH-------
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcC---------------CEE-eCChHHH-------
Confidence 5678888875 22 233333222 2279999999988877765432 222 1121111
Q ss_pred CCCCeeEEEEccccccccCCHHHHHHHHHHHHhh-ccCCeEEE
Q 027388 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSAL-LRPGGTFI 203 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~-lk~gG~li 203 (224)
....|+|+..-- ......++.++... ++++..++
T Consensus 61 -~~~aDvVilav~-------p~~~~~vl~~l~~~~l~~~~iii 95 (280)
T 3tri_A 61 -ALNADVVVLAVK-------PHQIKMVCEELKDILSETKILVI 95 (280)
T ss_dssp -HSSCSEEEECSC-------GGGHHHHHHHHHHHHHTTTCEEE
T ss_pred -HhcCCeEEEEeC-------HHHHHHHHHHHHhhccCCCeEEE
Confidence 245788886542 23456777888877 77654444
No 439
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=74.87 E-value=11 Score=28.82 Aligned_cols=80 Identities=11% Similarity=0.074 Sum_probs=53.5
Q ss_pred CCCeEEEecCCCchhHHHHHh---hcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccc--
Q 027388 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK-- 158 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~---~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~-- 158 (224)
+++.+|=-|++.| ++..++. ....+|+.+|.+++.++...+.+. ..+.++.++.+|+.+.....
T Consensus 6 ~gKvalVTGas~G-IG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~----------~~g~~~~~~~~Dvt~~~~v~~~ 74 (254)
T 4fn4_A 6 KNKVVIVTGAGSG-IGRAIAKKFALNDSIVVAVELLEDRLNQIVQELR----------GMGKEVLGVKADVSKKKDVEEF 74 (254)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH----------HTTCCEEEEECCTTSHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHH----------hcCCcEEEEEccCCCHHHHHHH
Confidence 6788888888776 4444433 355689999999998887777665 22445888999987643110
Q ss_pred ---ccCCCCCeeEEEEccc
Q 027388 159 ---VLADDAPFDICSCQFA 174 (224)
Q Consensus 159 ---~~~~~~~~D~i~~~~~ 174 (224)
....-+..|+++.+-.
T Consensus 75 ~~~~~~~~G~iDiLVNNAG 93 (254)
T 4fn4_A 75 VRRTFETYSRIDVLCNNAG 93 (254)
T ss_dssp HHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHcCCCCEEEECCc
Confidence 0002368999997653
No 440
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=74.72 E-value=3.4 Score=32.38 Aligned_cols=45 Identities=18% Similarity=0.216 Sum_probs=29.7
Q ss_pred CCeeEEEEccccccc-------cCCHHHHHHHHHHHHhhccCCeEEEEEeCC
Q 027388 164 APFDICSCQFAMHYS-------WSTEARARRALANVSALLRPGGTFIGTMPD 208 (224)
Q Consensus 164 ~~~D~i~~~~~l~~~-------~~~~~~~~~~l~~~~~~lk~gG~li~~~~~ 208 (224)
+.+|+|++.....+- .+......-+++...++|+|||.+++....
T Consensus 205 ~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kvyg 256 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYG 256 (320)
T ss_dssp CCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECC
T ss_pred CcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEec
Confidence 679999998753321 011112233677888999999999987553
No 441
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=74.60 E-value=20 Score=26.88 Aligned_cols=111 Identities=12% Similarity=0.070 Sum_probs=60.7
Q ss_pred CCCeEEEecCCCchhHHHHHh---h-cCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccc-cc
Q 027388 84 RGDVVLDLACGKGGDLIKWDK---A-KIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHL-DK 158 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~---~-~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~ 158 (224)
.+++||=.|++ |.++..+++ . ...+|++++.+....+...+.+.. ...++.++.+|+.+... ..
T Consensus 3 ~~k~vlITGas-ggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~----------~~~~~~~~~~Dl~~~~~~~~ 71 (276)
T 1wma_A 3 GIHVALVTGGN-KGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQA----------EGLSPRFHQLDIDDLQSIRA 71 (276)
T ss_dssp CCCEEEESSCS-SHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHH----------TTCCCEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHh----------cCCeeEEEECCCCCHHHHHH
Confidence 45677766654 556555443 2 456899999988766665555431 12347888999876421 00
Q ss_pred cc----CCCCCeeEEEEccccccc---cCC-HHHH-----------HHHHHHHHhhccCCeEEEEE
Q 027388 159 VL----ADDAPFDICSCQFAMHYS---WST-EARA-----------RRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 159 ~~----~~~~~~D~i~~~~~l~~~---~~~-~~~~-----------~~~l~~~~~~lk~gG~li~~ 205 (224)
.. ...+.+|+++.+-..... ... ..+. ..+++.+...++++|.++..
T Consensus 72 ~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~ 137 (276)
T 1wma_A 72 LRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNV 137 (276)
T ss_dssp HHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred HHHHHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEE
Confidence 00 011379999876533211 001 1222 22445556666666776654
No 442
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=74.13 E-value=13 Score=28.79 Aligned_cols=111 Identities=13% Similarity=0.009 Sum_probs=61.5
Q ss_pred CCCeEEEecCCCchhHHHHHh---hcCCeEEEEeCCh--hHHHHHHHhccCCcccccccccCCCCeeEEecccccccccc
Q 027388 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAE--GSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK 158 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~---~~~~~~~gvD~s~--~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 158 (224)
.++++|=.|++.| ++..+++ ....+|+.++.+. ...+...+... ....++.++.+|+.+.....
T Consensus 48 ~~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~Dv~d~~~v~ 116 (294)
T 3r3s_A 48 KDRKALVTGGDSG-IGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIE----------ECGRKAVLLPGDLSDESFAR 116 (294)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHH----------HTTCCEEECCCCTTSHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHH----------HcCCcEEEEEecCCCHHHHH
Confidence 5678888887665 5555443 2456888888763 33343333322 12345788889987642100
Q ss_pred -c----cCCCCCeeEEEEcccccccc-----CCHHHH-----------HHHHHHHHhhccCCeEEEEE
Q 027388 159 -V----LADDAPFDICSCQFAMHYSW-----STEARA-----------RRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 159 -~----~~~~~~~D~i~~~~~l~~~~-----~~~~~~-----------~~~l~~~~~~lk~gG~li~~ 205 (224)
. ....+..|+++.+-...... .+.++. ..+++.+...++++|.++..
T Consensus 117 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~i 184 (294)
T 3r3s_A 117 SLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITT 184 (294)
T ss_dssp HHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred HHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEE
Confidence 0 00125789998765432210 122332 23455666777788887764
No 443
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=73.91 E-value=22 Score=27.53 Aligned_cols=103 Identities=15% Similarity=0.142 Sum_probs=57.8
Q ss_pred CeEEEecCCC-chhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCCCC
Q 027388 86 DVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDA 164 (224)
Q Consensus 86 ~~iLDiGcG~-G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~ 164 (224)
.+|.=||+|. |......+.....+|+++|.++..++.+.+.- +.+ ..+..+. ..
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g----------------~~~-~~~~~~~--------~~ 70 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAG----------------ATL-ADSVADV--------AA 70 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTT----------------CEE-CSSHHHH--------TT
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCC----------------CEE-cCCHHHH--------Hh
Confidence 5788888875 32222222234458999999998777665431 111 1121111 23
Q ss_pred CeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeC-Ch---HHHHHHhhhcc
Q 027388 165 PFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP-DA---NVIIKKLREEH 220 (224)
Q Consensus 165 ~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~-~~---~~~~~~~~~~g 220 (224)
.|+|+..-. .......++..+...+++|..++-..- .. ..+.+.+.+.|
T Consensus 71 -aDvvi~~vp------~~~~~~~v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g 123 (296)
T 3qha_A 71 -ADLIHITVL------DDAQVREVVGELAGHAKPGTVIAIHSTISDTTAVELARDLKARD 123 (296)
T ss_dssp -SSEEEECCS------SHHHHHHHHHHHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGT
T ss_pred -CCEEEEECC------ChHHHHHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcC
Confidence 788886432 234566777888888888876664322 22 23444555444
No 444
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=73.78 E-value=14 Score=28.70 Aligned_cols=111 Identities=9% Similarity=-0.028 Sum_probs=61.3
Q ss_pred CCCeEEEecCCC-chhHHHHHh---hcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccc-c
Q 027388 84 RGDVVLDLACGK-GGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD-K 158 (224)
Q Consensus 84 ~~~~iLDiGcG~-G~~~~~l~~---~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~ 158 (224)
.++++|=.|++. ..++..+++ ....+|+.++.++...+.+.+.... ...+.++.+|+.+...- .
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-----------~~~~~~~~~Dv~d~~~v~~ 97 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAES-----------LGVKLTVPCDVSDAESVDN 97 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH-----------HTCCEEEECCTTCHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHh-----------cCCeEEEEcCCCCHHHHHH
Confidence 467888888754 224443332 3456899999987655555443321 11257888998764310 0
Q ss_pred cc----CCCCCeeEEEEcccccc-------c-cCCHHHHH-----------HHHHHHHhhccCCeEEEEE
Q 027388 159 VL----ADDAPFDICSCQFAMHY-------S-WSTEARAR-----------RALANVSALLRPGGTFIGT 205 (224)
Q Consensus 159 ~~----~~~~~~D~i~~~~~l~~-------~-~~~~~~~~-----------~~l~~~~~~lk~gG~li~~ 205 (224)
.. ..-+..|+++.+-.+.. + ..+.++.. .+++.+...++.+|.++..
T Consensus 98 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~i 167 (296)
T 3k31_A 98 MFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTL 167 (296)
T ss_dssp HHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEE
T ss_pred HHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEE
Confidence 00 01257899997654321 0 11233332 2445566677778877764
No 445
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=73.31 E-value=15 Score=23.42 Aligned_cols=69 Identities=9% Similarity=-0.179 Sum_probs=41.4
Q ss_pred CCeEEEecCCCchhHHHHHh---hcC-CeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccc-ccc
Q 027388 85 GDVVLDLACGKGGDLIKWDK---AKI-GYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHL-DKV 159 (224)
Q Consensus 85 ~~~iLDiGcG~G~~~~~l~~---~~~-~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~ 159 (224)
..+|+=+|+ |..+..++. ... .+++++|.++..++..... .+.+...|+.+... ..
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~----------------~~~~~~~d~~~~~~~~~- 65 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRM----------------GVATKQVDAKDEAGLAK- 65 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTT----------------TCEEEECCTTCHHHHHH-
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhC----------------CCcEEEecCCCHHHHHH-
Confidence 457888888 444444332 233 6799999998777665411 25666777654321 11
Q ss_pred cCCCCCeeEEEEccc
Q 027388 160 LADDAPFDICSCQFA 174 (224)
Q Consensus 160 ~~~~~~~D~i~~~~~ 174 (224)
....+|+|+..-.
T Consensus 66 --~~~~~d~vi~~~~ 78 (118)
T 3ic5_A 66 --ALGGFDAVISAAP 78 (118)
T ss_dssp --HTTTCSEEEECSC
T ss_pred --HHcCCCEEEECCC
Confidence 1247899987653
No 446
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=73.24 E-value=15 Score=29.19 Aligned_cols=103 Identities=16% Similarity=0.102 Sum_probs=53.6
Q ss_pred CeEEEecCCC-chhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCC--CeeEEeccccccccccccCC
Q 027388 86 DVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSF--PARLICGDCYEVHLDKVLAD 162 (224)
Q Consensus 86 ~~iLDiGcG~-G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~--~v~~~~~d~~~~~~~~~~~~ 162 (224)
.+|.=||+|. |......+.....+|+++|.++..++..++.... . .. ...... ++.....+..+ .
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~-~~--~~~~~~~~~~~~~~~~~~~--------~ 72 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAI-I-AE--GPGLAGTAHPDLLTSDIGL--------A 72 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSE-E-EE--SSSCCEEECCSEEESCHHH--------H
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCe-E-Ee--ccccccccccceecCCHHH--------H
Confidence 5788888876 3222222223445899999998877776654210 0 00 000000 00001111111 0
Q ss_pred CCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCC
Q 027388 163 DAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (224)
Q Consensus 163 ~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~ 208 (224)
...+|+|+..--. .....++..+...++++..++.. ++
T Consensus 73 ~~~~D~vi~~v~~-------~~~~~~~~~l~~~l~~~~~vv~~-~~ 110 (359)
T 1bg6_A 73 VKDADVILIVVPA-------IHHASIAANIASYISEGQLIILN-PG 110 (359)
T ss_dssp HTTCSEEEECSCG-------GGHHHHHHHHGGGCCTTCEEEES-SC
T ss_pred HhcCCEEEEeCCc-------hHHHHHHHHHHHhCCCCCEEEEc-CC
Confidence 2468988865432 22356778888889888765554 44
No 447
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=72.67 E-value=7.7 Score=34.76 Aligned_cols=107 Identities=13% Similarity=0.109 Sum_probs=62.6
Q ss_pred CeEEEecCCCch--hHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccc------cccCCCCeeEEeccccccccc
Q 027388 86 DVVLDLACGKGG--DLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQR------RKKFSFPARLICGDCYEVHLD 157 (224)
Q Consensus 86 ~~iLDiGcG~G~--~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~------~~~~~~~v~~~~~d~~~~~~~ 157 (224)
++|-=||+|+=+ ++..++ .....|+.+|+++..++.+++.....-..... .......+ ....+...
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a-~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~---- 390 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFA-RVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKL-RFSSSTKE---- 390 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCE-EEESCGGG----
T ss_pred cEEEEEcccHHHHHHHHHHH-hCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhh-cccCcHHH----
Confidence 478888888722 233332 35568999999999988887765311000000 00000111 11222211
Q ss_pred cccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCC
Q 027388 158 KVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPD 208 (224)
Q Consensus 158 ~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~ 208 (224)
...+|+|+ +-+++..+-..++++++-.+++|+.+|.-+|..
T Consensus 391 -----l~~aDlVI-----EAV~E~l~iK~~vf~~le~~~~~~aIlASNTSs 431 (742)
T 3zwc_A 391 -----LSTVDLVV-----EAVFEDMNLKKKVFAELSALCKPGAFLCTNTSA 431 (742)
T ss_dssp -----GGSCSEEE-----ECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS
T ss_pred -----HhhCCEEE-----EeccccHHHHHHHHHHHhhcCCCCceEEecCCc
Confidence 24577776 333445588899999999999999988876553
No 448
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=72.40 E-value=20 Score=26.38 Aligned_cols=81 Identities=6% Similarity=-0.136 Sum_probs=48.4
Q ss_pred CCeEEEecCCCchhHHHHHh---hcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccc-ccc
Q 027388 85 GDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD-KVL 160 (224)
Q Consensus 85 ~~~iLDiGcG~G~~~~~l~~---~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~ 160 (224)
++++|=.|++.| ++..+++ ....+|+.++.+...++...+.+.. ....++.++.+|+.+...- ...
T Consensus 2 ~k~vlITGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---------~~~~~~~~~~~D~~~~~~v~~~~ 71 (235)
T 3l77_A 2 MKVAVITGASRG-IGEAIARALARDGYALALGARSVDRLEKIAHELMQ---------EQGVEVFYHHLDVSKAESVEEFS 71 (235)
T ss_dssp CCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH---------HHCCCEEEEECCTTCHHHHHHHC
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---------hcCCeEEEEEeccCCHHHHHHHH
Confidence 456777776554 5555443 2456899999998877666554420 1134588899998764311 110
Q ss_pred C----CCCCeeEEEEcccc
Q 027388 161 A----DDAPFDICSCQFAM 175 (224)
Q Consensus 161 ~----~~~~~D~i~~~~~l 175 (224)
. ..+..|+++.+-.+
T Consensus 72 ~~~~~~~g~id~li~~Ag~ 90 (235)
T 3l77_A 72 KKVLERFGDVDVVVANAGL 90 (235)
T ss_dssp C-HHHHHSSCSEEEECCCC
T ss_pred HHHHHhcCCCCEEEECCcc
Confidence 0 11478999977543
No 449
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=72.10 E-value=25 Score=26.78 Aligned_cols=77 Identities=18% Similarity=-0.045 Sum_probs=46.3
Q ss_pred CCCeEEEecCCCchhHHHHHh---hcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccccc
Q 027388 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~---~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (224)
+++++|=-|++.| ++...+. ....+|+.+|.+.. +.+.+.+. ....++.++.+|+.+.......
T Consensus 8 ~GKvalVTGas~G-IG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~----------~~g~~~~~~~~Dv~d~~~v~~~ 74 (247)
T 4hp8_A 8 EGRKALVTGANTG-LGQAIAVGLAAAGAEVVCAARRAP--DETLDIIA----------KDGGNASALLIDFADPLAAKDS 74 (247)
T ss_dssp TTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHH----------HTTCCEEEEECCTTSTTTTTTS
T ss_pred CCCEEEEeCcCCH-HHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHH----------HhCCcEEEEEccCCCHHHHHHH
Confidence 5778888887776 4444433 35568998998753 12222222 1134578889998764332222
Q ss_pred CCCCCeeEEEEcc
Q 027388 161 ADDAPFDICSCQF 173 (224)
Q Consensus 161 ~~~~~~D~i~~~~ 173 (224)
...+..|+++.+-
T Consensus 75 ~~~g~iDiLVNNA 87 (247)
T 4hp8_A 75 FTDAGFDILVNNA 87 (247)
T ss_dssp STTTCCCEEEECC
T ss_pred HHhCCCCEEEECC
Confidence 2457899999765
No 450
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=71.93 E-value=31 Score=27.30 Aligned_cols=105 Identities=10% Similarity=0.002 Sum_probs=57.2
Q ss_pred CeEEEecCCC-c-hhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccC-C---------CCeeEEeccccc
Q 027388 86 DVVLDLACGK-G-GDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKF-S---------FPARLICGDCYE 153 (224)
Q Consensus 86 ~~iLDiGcG~-G-~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~-~---------~~v~~~~~d~~~ 153 (224)
.+|-=||+|. | .++..++ .....|++.|.++..++.+.+.....- ......+. . .++++ ..|+.+
T Consensus 7 ~kI~vIGaG~MG~~iA~~la-~~G~~V~l~d~~~~~~~~~~~~i~~~l-~~l~~~G~~~g~~~~~~~~~~i~~-~~~~~e 83 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFA-SGGFRVKLYDIEPRQITGALENIRKEM-KSLQQSGSLKGSLSAEEQLSLISS-CTNLAE 83 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCCEEEECSCHHHHHHHHHHHHHHH-HHHHHTTCCCSSSCHHHHHHTEEE-ECCHHH
T ss_pred ceEEEEeeCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHHHH-HHHHHcCccccccchHHHhhceEE-eCCHHH
Confidence 5677788875 2 2333343 344589999999999888865432000 00000000 0 01221 122211
Q ss_pred cccccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEe
Q 027388 154 VHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM 206 (224)
Q Consensus 154 ~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~ 206 (224)
.....|+|+..-. +.......++.++...++++.+++-.+
T Consensus 84 --------av~~aDlVieavp-----e~~~~k~~v~~~l~~~~~~~~Ii~s~t 123 (319)
T 2dpo_A 84 --------AVEGVVHIQECVP-----ENLDLKRKIFAQLDSIVDDRVVLSSSS 123 (319)
T ss_dssp --------HTTTEEEEEECCC-----SCHHHHHHHHHHHHTTCCSSSEEEECC
T ss_pred --------HHhcCCEEEEecc-----CCHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 1357899886432 223455678899999999988766443
No 451
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=71.70 E-value=12 Score=31.20 Aligned_cols=40 Identities=18% Similarity=0.009 Sum_probs=28.3
Q ss_pred CCCeEEEecCCC-chhHHHHHhhcCCeEEEEeCChhHHHHH
Q 027388 84 RGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDC 123 (224)
Q Consensus 84 ~~~~iLDiGcG~-G~~~~~l~~~~~~~~~gvD~s~~~~~~a 123 (224)
.+++|+=+|+|. |......+.....+|+++|.++.....+
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A 259 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQA 259 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHH
Confidence 678999999987 4444444445566899999998654444
No 452
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=71.56 E-value=31 Score=27.08 Aligned_cols=91 Identities=14% Similarity=0.091 Sum_probs=51.4
Q ss_pred CCCeEEEecCCC-chhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCC
Q 027388 84 RGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (224)
Q Consensus 84 ~~~~iLDiGcG~-G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (224)
...+|.=||+|. |......+......|+++|.++..++.+.+. .+.+ ..+..+.
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~----------------g~~~-~~~~~e~-------- 84 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAAL----------------GATI-HEQARAA-------- 84 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT----------------TCEE-ESSHHHH--------
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHC----------------CCEe-eCCHHHH--------
Confidence 346888898875 3322222223445899999999877665432 0211 1222111
Q ss_pred CCCeeEEEEccccccccCCHHHHHHHHH--HHHhhccCCeEEEEE
Q 027388 163 DAPFDICSCQFAMHYSWSTEARARRALA--NVSALLRPGGTFIGT 205 (224)
Q Consensus 163 ~~~~D~i~~~~~l~~~~~~~~~~~~~l~--~~~~~lk~gG~li~~ 205 (224)
....|+|+..-. .......++. .+...+++|..++-.
T Consensus 85 ~~~aDvVi~~vp------~~~~~~~v~~~~~~~~~l~~~~~vi~~ 123 (320)
T 4dll_A 85 ARDADIVVSMLE------NGAVVQDVLFAQGVAAAMKPGSLFLDM 123 (320)
T ss_dssp HTTCSEEEECCS------SHHHHHHHHTTTCHHHHCCTTCEEEEC
T ss_pred HhcCCEEEEECC------CHHHHHHHHcchhHHhhCCCCCEEEec
Confidence 245788876432 2244555665 677778887766543
No 453
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=71.45 E-value=31 Score=26.24 Aligned_cols=84 Identities=11% Similarity=-0.051 Sum_probs=48.5
Q ss_pred eEEEecCCC-chh-HHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCCCC
Q 027388 87 VVLDLACGK-GGD-LIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDA 164 (224)
Q Consensus 87 ~iLDiGcG~-G~~-~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~ 164 (224)
+|.=||+|. |.. +..+. . ..+|+++|.++...+.+.+.- +... +..+. ..
T Consensus 3 ~i~iiG~G~~G~~~a~~l~-~-g~~V~~~~~~~~~~~~~~~~g----------------~~~~--~~~~~--------~~ 54 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLA-R-RFPTLVWNRTFEKALRHQEEF----------------GSEA--VPLER--------VA 54 (289)
T ss_dssp CEEEECCSTTHHHHHHHHH-T-TSCEEEECSSTHHHHHHHHHH----------------CCEE--CCGGG--------GG
T ss_pred eEEEEcccHHHHHHHHHHh-C-CCeEEEEeCCHHHHHHHHHCC----------------Cccc--CHHHH--------Hh
Confidence 567788876 332 33343 3 457999999987776655431 1111 11111 23
Q ss_pred CeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEE
Q 027388 165 PFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIG 204 (224)
Q Consensus 165 ~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~ 204 (224)
.+|+|+..-. .......++..+...+++|..++.
T Consensus 55 ~~D~vi~~v~------~~~~~~~v~~~l~~~l~~~~~vv~ 88 (289)
T 2cvz_A 55 EARVIFTCLP------TTREVYEVAEALYPYLREGTYWVD 88 (289)
T ss_dssp GCSEEEECCS------SHHHHHHHHHHHTTTCCTTEEEEE
T ss_pred CCCEEEEeCC------ChHHHHHHHHHHHhhCCCCCEEEE
Confidence 5788886532 123355677778788888776553
No 454
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=70.74 E-value=23 Score=28.17 Aligned_cols=45 Identities=18% Similarity=0.123 Sum_probs=28.7
Q ss_pred hhcCCCeEEEecC--CCchhHHHHHhhcCCeEE-EEeCChh---HHHHHHH
Q 027388 81 YARRGDVVLDLAC--GKGGDLIKWDKAKIGYYV-GIDIAEG---SIEDCRT 125 (224)
Q Consensus 81 ~~~~~~~iLDiGc--G~G~~~~~l~~~~~~~~~-gvD~s~~---~~~~a~~ 125 (224)
...++.+||=+|+ |.|.++.++++....+++ .++.++. ..+.+++
T Consensus 164 ~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~ 214 (357)
T 1zsy_A 164 QLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKS 214 (357)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHH
T ss_pred ccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHh
Confidence 4567899999997 347778888766555555 5555443 3455543
No 455
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=70.62 E-value=15 Score=28.03 Aligned_cols=82 Identities=11% Similarity=0.067 Sum_probs=48.3
Q ss_pred CCCeEEEecCCCchhHHHHHh---hcCCeEEEEeCC------------hhHHHHHHHhccCCcccccccccCCCCeeEEe
Q 027388 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIA------------EGSIEDCRTRYNGDADHHQRRKKFSFPARLIC 148 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~---~~~~~~~gvD~s------------~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~ 148 (224)
.++++|=.|++.| ++..+++ ....+|+++|.+ ...++...+.+. ....++.++.
T Consensus 12 ~gk~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~ 80 (278)
T 3sx2_A 12 TGKVAFITGAARG-QGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVE----------DIGSRIVARQ 80 (278)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHH----------HHTCCEEEEE
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHH----------hcCCeEEEEe
Confidence 5678888887665 5544443 345689999976 444544444332 1134588899
Q ss_pred ccccccccc-ccc----CCCCCeeEEEEccccc
Q 027388 149 GDCYEVHLD-KVL----ADDAPFDICSCQFAMH 176 (224)
Q Consensus 149 ~d~~~~~~~-~~~----~~~~~~D~i~~~~~l~ 176 (224)
+|+.+...- ... ..-+..|+++.+-.+.
T Consensus 81 ~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 113 (278)
T 3sx2_A 81 ADVRDRESLSAALQAGLDELGRLDIVVANAGIA 113 (278)
T ss_dssp CCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCC
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 998764311 000 0114789999876543
No 456
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=70.45 E-value=7.2 Score=31.29 Aligned_cols=46 Identities=15% Similarity=0.130 Sum_probs=35.3
Q ss_pred hhcCCCeEEEecCCC-chhHHHHHhhc-CCeEEEEeCChhHHHHHHHh
Q 027388 81 YARRGDVVLDLACGK-GGDLIKWDKAK-IGYYVGIDIAEGSIEDCRTR 126 (224)
Q Consensus 81 ~~~~~~~iLDiGcG~-G~~~~~l~~~~-~~~~~gvD~s~~~~~~a~~~ 126 (224)
...++.+||=+|+|. |.++.++++.. ..+++++|.++..++.+++.
T Consensus 183 ~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~l 230 (359)
T 1h2b_A 183 TLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERL 230 (359)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHh
Confidence 456788999999853 55666666655 66899999999999888754
No 457
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=70.44 E-value=35 Score=26.34 Aligned_cols=87 Identities=9% Similarity=0.068 Sum_probs=49.7
Q ss_pred CeEEEecCCC-ch-hHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCCC
Q 027388 86 DVVLDLACGK-GG-DLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADD 163 (224)
Q Consensus 86 ~~iLDiGcG~-G~-~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 163 (224)
.+|.=||+|. |. ++..++ ....+|+++|.++..++.+.+.- +.. ..+..+. .
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~-~~G~~V~~~d~~~~~~~~~~~~g----------------~~~-~~~~~~~--------~ 57 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLL-KAGYLLNVFDLVQSAVDGLVAAG----------------ASA-ARSARDA--------V 57 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHH-HTTCEEEEECSSHHHHHHHHHTT----------------CEE-CSSHHHH--------H
T ss_pred CEEEEEeecHHHHHHHHHHH-hCCCeEEEEcCCHHHHHHHHHCC----------------CeE-cCCHHHH--------H
Confidence 4677888876 33 222233 34458999999998777665431 111 1121111 2
Q ss_pred CCeeEEEEccccccccCCHHHHHHHHH---HHHhhccCCeEEEE
Q 027388 164 APFDICSCQFAMHYSWSTEARARRALA---NVSALLRPGGTFIG 204 (224)
Q Consensus 164 ~~~D~i~~~~~l~~~~~~~~~~~~~l~---~~~~~lk~gG~li~ 204 (224)
...|+|+..-. .......++. .+...+++|..++-
T Consensus 58 ~~aDvvi~~vp------~~~~~~~v~~~~~~~~~~l~~~~~vi~ 95 (302)
T 2h78_A 58 QGADVVISMLP------ASQHVEGLYLDDDGLLAHIAPGTLVLE 95 (302)
T ss_dssp TTCSEEEECCS------CHHHHHHHHHSSSCGGGSSCSSCEEEE
T ss_pred hCCCeEEEECC------CHHHHHHHHcCchhHHhcCCCCcEEEE
Confidence 45788876432 2244566666 67777888776654
No 458
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=70.11 E-value=8.2 Score=31.17 Aligned_cols=106 Identities=14% Similarity=0.156 Sum_probs=59.2
Q ss_pred CCCeEEEecCCC-chhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCC
Q 027388 84 RGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (224)
Q Consensus 84 ~~~~iLDiGcG~-G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (224)
.+++|.=||.|. |......+.....+|++.|.++...+.+...- +.. ..++.++
T Consensus 163 ~gktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g----------------~~~-~~~l~el-------- 217 (351)
T 3jtm_A 163 EGKTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETG----------------AKF-VEDLNEM-------- 217 (351)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHC----------------CEE-CSCHHHH--------
T ss_pred cCCEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCC----------------CeE-cCCHHHH--------
Confidence 577888888775 33333333345568999998865444443321 111 1122221
Q ss_pred CCCeeEEEEccccccccCCHHHHHH-HHHHHHhhccCCeEEEEE----eCChHHHHHHhhhcc
Q 027388 163 DAPFDICSCQFAMHYSWSTEARARR-ALANVSALLRPGGTFIGT----MPDANVIIKKLREEH 220 (224)
Q Consensus 163 ~~~~D~i~~~~~l~~~~~~~~~~~~-~l~~~~~~lk~gG~li~~----~~~~~~~~~~~~~~g 220 (224)
....|+|+..-.+.- .... +-......||+|++|+=. .-+...+.+.|++.+
T Consensus 218 l~~aDvV~l~~Plt~------~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~ 274 (351)
T 3jtm_A 218 LPKCDVIVINMPLTE------KTRGMFNKELIGKLKKGVLIVNNARGAIMERQAVVDAVESGH 274 (351)
T ss_dssp GGGCSEEEECSCCCT------TTTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTS
T ss_pred HhcCCEEEECCCCCH------HHHHhhcHHHHhcCCCCCEEEECcCchhhCHHHHHHHHHhCC
Confidence 246799987654320 0111 124566778998777643 336778888887643
No 459
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=70.11 E-value=9.1 Score=31.11 Aligned_cols=103 Identities=15% Similarity=0.046 Sum_probs=57.2
Q ss_pred CCCeEEEecCCC-chhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCC
Q 027388 84 RGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (224)
Q Consensus 84 ~~~~iLDiGcG~-G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (224)
.+++|.=||.|. |......+.....+|++.|.+... +.+... . +. ..++.++
T Consensus 175 ~gktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~~~-~~~~~~-g---------------~~--~~~l~el-------- 227 (365)
T 4hy3_A 175 AGSEIGIVGFGDLGKALRRVLSGFRARIRVFDPWLPR-SMLEEN-G---------------VE--PASLEDV-------- 227 (365)
T ss_dssp SSSEEEEECCSHHHHHHHHHHTTSCCEEEEECSSSCH-HHHHHT-T---------------CE--ECCHHHH--------
T ss_pred CCCEEEEecCCcccHHHHHhhhhCCCEEEEECCCCCH-HHHhhc-C---------------ee--eCCHHHH--------
Confidence 467888887765 333333333355689999988533 222211 1 22 1233222
Q ss_pred CCCeeEEEEccccccccCCHHHHHHH-HHHHHhhccCCeEEEEE----eCChHHHHHHhhhc
Q 027388 163 DAPFDICSCQFAMHYSWSTEARARRA-LANVSALLRPGGTFIGT----MPDANVIIKKLREE 219 (224)
Q Consensus 163 ~~~~D~i~~~~~l~~~~~~~~~~~~~-l~~~~~~lk~gG~li~~----~~~~~~~~~~~~~~ 219 (224)
....|+|+....+.- +...+ -......+|||++|+-. .-+...+.+.+++.
T Consensus 228 l~~aDvV~l~~Plt~------~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g 283 (365)
T 4hy3_A 228 LTKSDFIFVVAAVTS------ENKRFLGAEAFSSMRRGAAFILLSRADVVDFDALMAAVSSG 283 (365)
T ss_dssp HHSCSEEEECSCSSC------C---CCCHHHHHTSCTTCEEEECSCGGGSCHHHHHHHHHTT
T ss_pred HhcCCEEEEcCcCCH------HHHhhcCHHHHhcCCCCcEEEECcCCchhCHHHHHHHHHcC
Confidence 246799987654321 11111 24677889999887754 34677888888754
No 460
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=69.15 E-value=5.7 Score=32.01 Aligned_cols=35 Identities=23% Similarity=0.341 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHhhccCCeEEEEEeCCh--HHHHHHhh
Q 027388 183 ARARRALANVSALLRPGGTFIGTMPDA--NVIIKKLR 217 (224)
Q Consensus 183 ~~~~~~l~~~~~~lk~gG~li~~~~~~--~~~~~~~~ 217 (224)
..+..+|..+.++|+|||+|++.+.+. +.|.+.+-
T Consensus 251 ~~L~~~L~~a~~~L~~gGRl~VISFHSLEDRiVK~~f 287 (347)
T 3tka_A 251 EEIEQALKSSLNVLAPGGRLSIISFHSLEDRIVKRFM 287 (347)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEESSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEecCchhHHHHHHHH
Confidence 456788999999999999999998885 56666443
No 461
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=68.87 E-value=19 Score=30.89 Aligned_cols=107 Identities=9% Similarity=-0.020 Sum_probs=60.2
Q ss_pred CeEEEecCCCchhHHHHHh---hcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCC
Q 027388 86 DVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (224)
Q Consensus 86 ~~iLDiGcG~G~~~~~l~~---~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (224)
..++=+|+| ..+..+++ .....++.+|.+++.++.++..+. +.++.+|..+...-.. ..
T Consensus 128 ~hviI~G~g--~~g~~la~~L~~~~~~vvvid~~~~~~~~~~~~~~---------------~~~i~Gd~~~~~~L~~-a~ 189 (565)
T 4gx0_A 128 GHILIFGID--PITRTLIRKLESRNHLFVVVTDNYDQALHLEEQEG---------------FKVVYGSPTDAHVLAG-LR 189 (565)
T ss_dssp SCEEEESCC--HHHHHHHHHTTTTTCCEEEEESCHHHHHHHHHSCS---------------SEEEESCTTCHHHHHH-TT
T ss_pred CeEEEECCC--hHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcC---------------CeEEEeCCCCHHHHHh-cC
Confidence 457777665 45555544 345579999999998888765422 6889999876432100 13
Q ss_pred CCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeCChHHHHHHhhhcc
Q 027388 163 DAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVIIKKLREEH 220 (224)
Q Consensus 163 ~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~~~~~~~~~~~g 220 (224)
...+|.+++. .. +.....+-...+.+. ...++....+.. -.+.++..|
T Consensus 190 i~~a~~vi~t--~~------D~~n~~~~~~ar~~~-~~~iiar~~~~~-~~~~l~~~G 237 (565)
T 4gx0_A 190 VAAARSIIAN--LS------DPDNANLCLTVRSLC-QTPIIAVVKEPV-HGELLRLAG 237 (565)
T ss_dssp GGGCSEEEEC--SC------HHHHHHHHHHHHTTC-CCCEEEECSSGG-GHHHHHHHT
T ss_pred cccCCEEEEe--CC------cHHHHHHHHHHHHhc-CceEEEEECCHH-HHHHHHHcC
Confidence 4678888862 21 222223333445555 555555544332 233344444
No 462
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=68.84 E-value=28 Score=26.33 Aligned_cols=78 Identities=12% Similarity=0.003 Sum_probs=45.3
Q ss_pred CCCeEEEecC-CCchhHHHHHh---hcCCeEEEEeCChhH-HHHHHHhccCCcccccccccCCCCeeEEecccccccc-c
Q 027388 84 RGDVVLDLAC-GKGGDLIKWDK---AKIGYYVGIDIAEGS-IEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHL-D 157 (224)
Q Consensus 84 ~~~~iLDiGc-G~G~~~~~l~~---~~~~~~~gvD~s~~~-~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~ 157 (224)
.++++|=.|+ |+|.++..++. ....+|+.++.+... ++...+.+ ..++.++.+|+.+... .
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~v~ 72 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL-------------PAKAPLLELDVQNEEHLA 72 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS-------------SSCCCEEECCTTCHHHHH
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc-------------CCCceEEEccCCCHHHHH
Confidence 4678888887 35556665544 245689999988743 23332222 2347788889876431 0
Q ss_pred ccc----CCCC---CeeEEEEccc
Q 027388 158 KVL----ADDA---PFDICSCQFA 174 (224)
Q Consensus 158 ~~~----~~~~---~~D~i~~~~~ 174 (224)
... ..-+ .+|+++.+-.
T Consensus 73 ~~~~~~~~~~g~~~~iD~lv~nAg 96 (269)
T 2h7i_A 73 SLAGRVTEAIGAGNKLDGVVHSIG 96 (269)
T ss_dssp HHHHHHHHHHCTTCCEEEEEECCC
T ss_pred HHHHHHHHHhCCCCCceEEEECCc
Confidence 000 0112 7999997654
No 463
>1ej6_A Lambda2; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_U
Probab=68.70 E-value=13 Score=34.75 Aligned_cols=103 Identities=16% Similarity=0.176 Sum_probs=66.8
Q ss_pred hcCCCeEEEecCCCchhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccC
Q 027388 82 ARRGDVVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (224)
...+..+||+|+|.---...+. .....++.+|.-+.. +. ...+...-.|++.|.......
T Consensus 819 ~~~~~~~lDlGTGPE~RiLsLi-P~~~pvtm~D~RP~a--------e~-------~~~w~~~T~f~~~DyL~~~~~---- 878 (1289)
T 1ej6_A 819 VYDGDVVLDLGTGPEAKILELI-PATSPVTCVDIRPTA--------QP-------SGCWNVRTTFLELDYLSDGWI---- 878 (1289)
T ss_dssp CCTTCCEEEESCCSSCGGGGTS-CTTSCEEEEESSCCC--------SC-------STTBSSCEEEEESCTTSSSCG----
T ss_pred ecccceEEEccCCCcceeeeec-CCCCceEEecccCch--------hh-------hccccccceeeEcccccccee----
Confidence 4578899999999976555554 344579999987721 10 123344468999998765442
Q ss_pred CCCCeeEEEEccccccccC-CHHHHHHHHHHHHhhccCCe--EEEE
Q 027388 162 DDAPFDICSCQFAMHYSWS-TEARARRALANVSALLRPGG--TFIG 204 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~~~~~-~~~~~~~~l~~~~~~lk~gG--~li~ 204 (224)
-..++|.++|.+.|.-... ....+.+.++++.+.+++.| .+++
T Consensus 879 ~~~~~D~vt~i~SLGAA~A~a~~tl~~~~~q~l~~~~~~~~~~l~l 924 (1289)
T 1ej6_A 879 TGVRGDIVTCMLSLGAAAAGKSMTFDAAFQQLIKVLSKSTANVVLV 924 (1289)
T ss_dssp GGCCCSEEEECSCHHHHHHHHTCCHHHHHHHHHHHHHTSCCSEEEE
T ss_pred ecCCCcEEEEEeechhhhhccCCcHHHHHHHHHHHHHhcCccEEEE
Confidence 2468999999987763200 00135677888888887765 3544
No 464
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=68.68 E-value=4.8 Score=30.45 Aligned_cols=41 Identities=12% Similarity=0.229 Sum_probs=25.2
Q ss_pred CeEEEecCCC-ch-hHHHHHhhcC---CeEEEEeCChhHHHHHHHh
Q 027388 86 DVVLDLACGK-GG-DLIKWDKAKI---GYYVGIDIAEGSIEDCRTR 126 (224)
Q Consensus 86 ~~iLDiGcG~-G~-~~~~l~~~~~---~~~~gvD~s~~~~~~a~~~ 126 (224)
.+|.=||||. |. ++..+...+. ..++++|.++..++.+.+.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~ 48 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEK 48 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHH
Confidence 3577788775 22 2223332222 2899999999887776544
No 465
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=68.49 E-value=5.5 Score=31.17 Aligned_cols=35 Identities=17% Similarity=0.389 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHhhccCCeEEEEEeCCh--HHHHHHhh
Q 027388 183 ARARRALANVSALLRPGGTFIGTMPDA--NVIIKKLR 217 (224)
Q Consensus 183 ~~~~~~l~~~~~~lk~gG~li~~~~~~--~~~~~~~~ 217 (224)
..+..+|....++|+|||+|++.+.+. +.|.+.+-
T Consensus 210 ~~L~~~L~~a~~~L~~gGrl~visfHSLEDRiVK~~~ 246 (285)
T 1wg8_A 210 NALKEFLEQAAEVLAPGGRLVVIAFHSLEDRVVKRFL 246 (285)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEECSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEecCcHHHHHHHHHH
Confidence 457889999999999999999988875 56665443
No 466
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=67.48 E-value=22 Score=28.69 Aligned_cols=105 Identities=10% Similarity=-0.042 Sum_probs=57.9
Q ss_pred CCeEEEecCCCchhHHHHHh---hcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccC
Q 027388 85 GDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 85 ~~~iLDiGcG~G~~~~~l~~---~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (224)
..+|.=||+|. ++..++. .....|+++|.++..++.+.+.- +.. ..+..+...
T Consensus 22 ~mkIgiIGlG~--mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g----------------~~~-~~s~~e~~~----- 77 (358)
T 4e21_A 22 SMQIGMIGLGR--MGADMVRRLRKGGHECVVYDLNVNAVQALEREG----------------IAG-ARSIEEFCA----- 77 (358)
T ss_dssp CCEEEEECCSH--HHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTT----------------CBC-CSSHHHHHH-----
T ss_pred CCEEEEECchH--HHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCC----------------CEE-eCCHHHHHh-----
Confidence 46788888764 3333322 34458999999998777665321 111 112222111
Q ss_pred CCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEe-CC---hHHHHHHhhhcc
Q 027388 162 DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTM-PD---ANVIIKKLREEH 220 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~-~~---~~~~~~~~~~~g 220 (224)
.....|+|+..-.. .....++..+...+++|.+++-.. .. ...+.+.+.+.|
T Consensus 78 ~a~~~DvVi~~vp~-------~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g 133 (358)
T 4e21_A 78 KLVKPRVVWLMVPA-------AVVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQG 133 (358)
T ss_dssp HSCSSCEEEECSCG-------GGHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTT
T ss_pred cCCCCCEEEEeCCH-------HHHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCC
Confidence 12345888865322 245667788888888877665432 22 234445555544
No 467
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=67.37 E-value=10 Score=30.31 Aligned_cols=103 Identities=15% Similarity=0.113 Sum_probs=56.5
Q ss_pred CCCeEEEecCCC-chhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCC
Q 027388 84 RGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (224)
Q Consensus 84 ~~~~iLDiGcG~-G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (224)
.+++|.=||.|. |......+.....+|+++|.+... +.+... . +.. .++.++
T Consensus 164 ~g~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~-g---------------~~~--~~l~el-------- 216 (335)
T 2g76_A 164 NGKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISP-EVSASF-G---------------VQQ--LPLEEI-------- 216 (335)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCH-HHHHHT-T---------------CEE--CCHHHH--------
T ss_pred CcCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcch-hhhhhc-C---------------cee--CCHHHH--------
Confidence 567888888764 332222333345689999988754 222211 1 221 222221
Q ss_pred CCCeeEEEEccccccccCCHHHHHHHH-HHHHhhccCCeEEEEE----eCChHHHHHHhhhc
Q 027388 163 DAPFDICSCQFAMHYSWSTEARARRAL-ANVSALLRPGGTFIGT----MPDANVIIKKLREE 219 (224)
Q Consensus 163 ~~~~D~i~~~~~l~~~~~~~~~~~~~l-~~~~~~lk~gG~li~~----~~~~~~~~~~~~~~ 219 (224)
....|+|+....+.- ....++ ......+|+|++|+-. .-+...+.+.+++.
T Consensus 217 l~~aDvV~l~~P~t~------~t~~li~~~~l~~mk~gailIN~arg~vvd~~aL~~aL~~g 272 (335)
T 2g76_A 217 WPLCDFITVHTPLLP------STTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSG 272 (335)
T ss_dssp GGGCSEEEECCCCCT------TTTTSBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHT
T ss_pred HhcCCEEEEecCCCH------HHHHhhCHHHHhhCCCCcEEEECCCccccCHHHHHHHHHhC
Confidence 246799987654321 111222 4567889998877643 22456778887764
No 468
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=67.36 E-value=32 Score=25.76 Aligned_cols=112 Identities=7% Similarity=-0.112 Sum_probs=62.8
Q ss_pred cCCCeEEEecCC-CchhHHHHHh---hcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccc
Q 027388 83 RRGDVVLDLACG-KGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK 158 (224)
Q Consensus 83 ~~~~~iLDiGcG-~G~~~~~l~~---~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 158 (224)
.++++||=.|++ +|.++..+++ ....+|+.++.+....+.+++... . ...+.++.+|+.+.....
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------~-~~~~~~~~~Dv~~~~~v~ 80 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAA----------E-FGSELVFPCDVADDAQID 80 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHH----------H-TTCCCEEECCTTCHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHH----------H-cCCcEEEECCCCCHHHHH
Confidence 467889988875 2335554443 345689999988665555544432 1 113778899987643100
Q ss_pred -c----cCCCCCeeEEEEccccccc-------c--CCHHHHH-----------HHHHHHHhhccCCeEEEEE
Q 027388 159 -V----LADDAPFDICSCQFAMHYS-------W--STEARAR-----------RALANVSALLRPGGTFIGT 205 (224)
Q Consensus 159 -~----~~~~~~~D~i~~~~~l~~~-------~--~~~~~~~-----------~~l~~~~~~lk~gG~li~~ 205 (224)
. ....+..|+++.+-.+... + .+.++.. .+++.+...++++|.++..
T Consensus 81 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~i 152 (271)
T 3ek2_A 81 ALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTL 152 (271)
T ss_dssp HHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEE
Confidence 0 0012579999976543221 0 1333332 2445566666667776654
No 469
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=67.29 E-value=44 Score=26.36 Aligned_cols=111 Identities=9% Similarity=-0.022 Sum_probs=54.3
Q ss_pred CCeEEEecCCCchhHH--HHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEe-ccccccccccccC
Q 027388 85 GDVVLDLACGKGGDLI--KWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLIC-GDCYEVHLDKVLA 161 (224)
Q Consensus 85 ~~~iLDiGcG~G~~~~--~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~-~d~~~~~~~~~~~ 161 (224)
..+|.=||+|.=.... .++..+...++.+|+++..++.....+.... .......++.. .|...
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~------~~~~~~~~i~~t~d~~a-------- 69 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTN------VMAYSNCKVSGSNTYDD-------- 69 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHH------HHHTCCCCEEEECCGGG--------
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhh------hhcCCCcEEEECCCHHH--------
Confidence 3578888885522221 1222233259999999987765433332100 00011122222 34321
Q ss_pred CCCCeeEEEEcccc--------------ccccCCHHHHHHHHHHHHhhccCCeEEEEEeCChHHH
Q 027388 162 DDAPFDICSCQFAM--------------HYSWSTEARARRALANVSALLRPGGTFIGTMPDANVI 212 (224)
Q Consensus 162 ~~~~~D~i~~~~~l--------------~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~~~~~~ 212 (224)
-...|+|+..-.. ..+....+-...+++.+.+.. |++++++.+ |+..+
T Consensus 70 -l~~aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~t-NP~~~ 131 (322)
T 1t2d_A 70 -LAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIVVT-NPVDV 131 (322)
T ss_dssp -GTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECS-SSHHH
T ss_pred -hCCCCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEec-CChHH
Confidence 2467888865411 111001123556667777775 899887754 44333
No 470
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=66.83 E-value=23 Score=26.62 Aligned_cols=80 Identities=14% Similarity=0.012 Sum_probs=50.8
Q ss_pred CCCeEEEecCCCchhHHHHHh---hcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccc-cc
Q 027388 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD-KV 159 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~---~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~~ 159 (224)
.++++|=.|++.| ++..+++ ....+|+.++.++..++.+...+.. ...++.++.+|+.+...- ..
T Consensus 5 ~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----------~~~~~~~~~~Dv~~~~~v~~~ 73 (257)
T 3imf_A 5 KEKVVIITGGSSG-MGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQ----------FPGQILTVQMDVRNTDDIQKM 73 (257)
T ss_dssp TTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC----------STTCEEEEECCTTCHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh----------cCCcEEEEEccCCCHHHHHHH
Confidence 4677887777655 5554443 2456899999999888877766552 234588899998764210 00
Q ss_pred c----CCCCCeeEEEEccc
Q 027388 160 L----ADDAPFDICSCQFA 174 (224)
Q Consensus 160 ~----~~~~~~D~i~~~~~ 174 (224)
. ...+..|+++.+-.
T Consensus 74 ~~~~~~~~g~id~lv~nAg 92 (257)
T 3imf_A 74 IEQIDEKFGRIDILINNAA 92 (257)
T ss_dssp HHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHcCCCCEEEECCC
Confidence 0 01247899987654
No 471
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=66.63 E-value=7.7 Score=31.47 Aligned_cols=106 Identities=14% Similarity=0.155 Sum_probs=57.5
Q ss_pred CCCeEEEecCCC-chhHHHHHhhcCCe-EEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccC
Q 027388 84 RGDVVLDLACGK-GGDLIKWDKAKIGY-YVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 84 ~~~~iLDiGcG~-G~~~~~l~~~~~~~-~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (224)
.+++|.=||+|. |......+.....+ +++.|.+....+.+... . +.. ..++.++
T Consensus 163 ~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~-g---------------~~~-~~~l~el------- 218 (364)
T 2j6i_A 163 EGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKV-G---------------ARR-VENIEEL------- 218 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHT-T---------------EEE-CSSHHHH-------
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhc-C---------------cEe-cCCHHHH-------
Confidence 577888888765 33222233334455 99999887544444321 1 221 1122211
Q ss_pred CCCCeeEEEEccccccccCCHHHHHHHH-HHHHhhccCCeEEEEE----eCChHHHHHHhhhcc
Q 027388 162 DDAPFDICSCQFAMHYSWSTEARARRAL-ANVSALLRPGGTFIGT----MPDANVIIKKLREEH 220 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~~~~~~~~~~~~~l-~~~~~~lk~gG~li~~----~~~~~~~~~~~~~~g 220 (224)
....|+|+..-.+.- ....++ ......|++|++|+-. .-+...+.+.+++.+
T Consensus 219 -l~~aDvV~l~~P~t~------~t~~li~~~~l~~mk~ga~lIn~arG~~vd~~aL~~aL~~g~ 275 (364)
T 2j6i_A 219 -VAQADIVTVNAPLHA------GTKGLINKELLSKFKKGAWLVNTARGAICVAEDVAAALESGQ 275 (364)
T ss_dssp -HHTCSEEEECCCCST------TTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTS
T ss_pred -HhcCCEEEECCCCCh------HHHHHhCHHHHhhCCCCCEEEECCCCchhCHHHHHHHHHcCC
Confidence 236799887654420 111111 3466788888776643 235677888887643
No 472
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=66.51 E-value=39 Score=25.48 Aligned_cols=66 Identities=12% Similarity=-0.047 Sum_probs=45.0
Q ss_pred CeEEEecCCCchhHHHHHh---hcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCC
Q 027388 86 DVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (224)
Q Consensus 86 ~~iLDiGcG~G~~~~~l~~---~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (224)
++||=.|+ |.++..+++ ....+|++++-++........ ..++++.+|+.++.
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----------------~~~~~~~~D~~d~~------- 60 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA----------------SGAEPLLWPGEEPS------- 60 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH----------------TTEEEEESSSSCCC-------
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh----------------CCCeEEEecccccc-------
Confidence 57999995 766666554 245589999988866544432 13788899987743
Q ss_pred CCCeeEEEEccccc
Q 027388 163 DAPFDICSCQFAMH 176 (224)
Q Consensus 163 ~~~~D~i~~~~~l~ 176 (224)
...+|+|+......
T Consensus 61 ~~~~d~vi~~a~~~ 74 (286)
T 3ius_A 61 LDGVTHLLISTAPD 74 (286)
T ss_dssp CTTCCEEEECCCCB
T ss_pred cCCCCEEEECCCcc
Confidence 35789998765543
No 473
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=66.43 E-value=47 Score=27.98 Aligned_cols=106 Identities=12% Similarity=0.039 Sum_probs=57.7
Q ss_pred CeEEEecCCC-c-hhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCC--------CCeeEEeccccccc
Q 027388 86 DVVLDLACGK-G-GDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFS--------FPARLICGDCYEVH 155 (224)
Q Consensus 86 ~~iLDiGcG~-G-~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~--------~~v~~~~~d~~~~~ 155 (224)
.+|.=||+|. | .++..++ .....|+++|.++..++.+.+.....-....+...+. .++++ ..|...
T Consensus 6 ~kVgVIGaG~MG~~IA~~la-~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~-~~~~~~-- 81 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAA-SHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIP-VTDIHA-- 81 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHH-HTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEE-ECCGGG--
T ss_pred CEEEEECcCHHHHHHHHHHH-HCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeE-eCCHHH--
Confidence 4566778875 2 2333343 3445899999999999888764310000000000000 11222 222211
Q ss_pred cccccCCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEEeC
Q 027388 156 LDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMP 207 (224)
Q Consensus 156 ~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~~~ 207 (224)
....|+|+..- .+.......+++++...++++.+|+..+.
T Consensus 82 -------~~~aDlVIeAV-----pe~~~vk~~v~~~l~~~~~~~~IlasntS 121 (483)
T 3mog_A 82 -------LAAADLVIEAA-----SERLEVKKALFAQLAEVCPPQTLLTTNTS 121 (483)
T ss_dssp -------GGGCSEEEECC-----CCCHHHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred -------hcCCCEEEEcC-----CCcHHHHHHHHHHHHHhhccCcEEEecCC
Confidence 24679888542 12334557889999999999988765443
No 474
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=66.35 E-value=17 Score=30.56 Aligned_cols=41 Identities=10% Similarity=-0.036 Sum_probs=28.6
Q ss_pred cCCCeEEEecCCC-chhHHHHHhhcCCeEEEEeCChhHHHHH
Q 027388 83 RRGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDC 123 (224)
Q Consensus 83 ~~~~~iLDiGcG~-G~~~~~l~~~~~~~~~gvD~s~~~~~~a 123 (224)
-.+++|+=+|+|. |......+.....+|+++|.++.....+
T Consensus 245 L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A 286 (464)
T 3n58_A 245 MAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQA 286 (464)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHH
T ss_pred ccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHH
Confidence 3688999999886 4444444445667999999988644333
No 475
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=66.25 E-value=31 Score=26.15 Aligned_cols=111 Identities=19% Similarity=0.037 Sum_probs=61.4
Q ss_pred CCCeEEEecCCCchhHHHHHh---hcCCeEEEEeC-ChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccc-c
Q 027388 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDI-AEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD-K 158 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~---~~~~~~~gvD~-s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~ 158 (224)
.++++|=.|++.| ++..+++ ....+|+.++. +....+...+.+. ....++.++.+|+.+...- .
T Consensus 17 ~~k~~lVTGas~g-IG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~Dv~~~~~v~~ 85 (270)
T 3is3_A 17 DGKVALVTGSGRG-IGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIK----------ALGSDAIAIKADIRQVPEIVK 85 (270)
T ss_dssp TTCEEEESCTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH----------HTTCCEEEEECCTTSHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH----------hcCCcEEEEEcCCCCHHHHHH
Confidence 5678888887765 5554443 24557887765 4444554444433 1234578899998764310 0
Q ss_pred cc----CCCCCeeEEEEccccccc----cCCHHHH-----------HHHHHHHHhhccCCeEEEEE
Q 027388 159 VL----ADDAPFDICSCQFAMHYS----WSTEARA-----------RRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 159 ~~----~~~~~~D~i~~~~~l~~~----~~~~~~~-----------~~~l~~~~~~lk~gG~li~~ 205 (224)
.. ..-+..|+++.+-.+... ..+.++. ..+++.+...++++|.+++.
T Consensus 86 ~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~i 151 (270)
T 3is3_A 86 LFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLT 151 (270)
T ss_dssp HHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEE
Confidence 00 012478999866443211 0023332 23455667777788877764
No 476
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=66.05 E-value=8.7 Score=26.16 Aligned_cols=42 Identities=7% Similarity=-0.095 Sum_probs=27.4
Q ss_pred cCCCeEEEecCCCchhHHHHHhh---cCCeEEEEeCChhHHHHHHHh
Q 027388 83 RRGDVVLDLACGKGGDLIKWDKA---KIGYYVGIDIAEGSIEDCRTR 126 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~---~~~~~~gvD~s~~~~~~a~~~ 126 (224)
..+++|+=+||| .++..++.. ...+++.+|.++...+...+.
T Consensus 19 ~~~~~v~iiG~G--~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~ 63 (144)
T 3oj0_A 19 NGGNKILLVGNG--MLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEK 63 (144)
T ss_dssp HCCCEEEEECCS--HHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHH
T ss_pred ccCCEEEEECCC--HHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHH
Confidence 358899999985 455444432 234588999998776654333
No 477
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=66.02 E-value=9.8 Score=30.01 Aligned_cols=101 Identities=16% Similarity=0.151 Sum_probs=55.7
Q ss_pred CCCeEEEecCCCchhHHHHH---hhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccccc
Q 027388 84 RGDVVLDLACGKGGDLIKWD---KAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~---~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (224)
.+++|.=||+|. ++..++ .....+++++|.+... +.+.+. . +.+ .++.++
T Consensus 141 ~g~~vgIiG~G~--IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~~~-g---------------~~~--~~l~el------ 193 (307)
T 1wwk_A 141 EGKTIGIIGFGR--IGYQVAKIANALGMNILLYDPYPNE-ERAKEV-N---------------GKF--VDLETL------ 193 (307)
T ss_dssp TTCEEEEECCSH--HHHHHHHHHHHTTCEEEEECSSCCH-HHHHHT-T---------------CEE--CCHHHH------
T ss_pred CCceEEEEccCH--HHHHHHHHHHHCCCEEEEECCCCCh-hhHhhc-C---------------ccc--cCHHHH------
Confidence 467788887764 444433 3355689999998865 333221 1 222 122221
Q ss_pred CCCCCeeEEEEccccccccCCHHHHHHHH-HHHHhhccCCeEEEEE----eCChHHHHHHhhhc
Q 027388 161 ADDAPFDICSCQFAMHYSWSTEARARRAL-ANVSALLRPGGTFIGT----MPDANVIIKKLREE 219 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~~~~~~~~~~~l-~~~~~~lk~gG~li~~----~~~~~~~~~~~~~~ 219 (224)
....|+|+....+.- ....++ ......+|+|++|+-. .-+...+.+.+++.
T Consensus 194 --l~~aDvV~l~~p~~~------~t~~li~~~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~g 249 (307)
T 1wwk_A 194 --LKESDVVTIHVPLVE------STYHLINEERLKLMKKTAILINTSRGPVVDTNALVKALKEG 249 (307)
T ss_dssp --HHHCSEEEECCCCST------TTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHT
T ss_pred --HhhCCEEEEecCCCh------HHhhhcCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHHhC
Confidence 135788887654321 111122 3456778998877744 22456778877763
No 478
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=65.90 E-value=7.2 Score=30.24 Aligned_cols=115 Identities=18% Similarity=0.201 Sum_probs=58.9
Q ss_pred cCCCeEEEecCCCchhHHH--HHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccccc
Q 027388 83 RRGDVVLDLACGKGGDLIK--WDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~--l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (224)
..++++|=+|+|...-+.. ++..+..+++.++-+....+...+.+.. ... .... .... .
T Consensus 123 ~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~ra~~la~~~~~---------~~~-~~~~-~~~~----~---- 183 (269)
T 3tum_A 123 PAGKRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGAVCELLGN---------GFP-GLTV-STQF----S---- 183 (269)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHH---------HCT-TCEE-ESCC----S----
T ss_pred cccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHHHhc---------cCC-ccee-hhhh----h----
Confidence 3578899999986543333 3334667899999887665554444330 000 0111 1111 0
Q ss_pred CCCCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEE--EEeCChHHHHHHhhhcc
Q 027388 161 ADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFI--GTMPDANVIIKKLREEH 220 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li--~~~~~~~~~~~~~~~~g 220 (224)
....+|+|+..-.+... +..+ ..+-......++++++++ +..|..-.++..-++.|
T Consensus 184 -~~~~~dliiNaTp~Gm~--~~~~-~p~~~~~~~~l~~~~~v~D~vY~P~~T~ll~~A~~~G 241 (269)
T 3tum_A 184 -GLEDFDLVANASPVGMG--TRAE-LPLSAALLATLQPDTLVADVVTSPEITPLLNRARQVG 241 (269)
T ss_dssp -CSTTCSEEEECSSTTCS--TTCC-CSSCHHHHHTCCTTSEEEECCCSSSSCHHHHHHHHHT
T ss_pred -hhhcccccccCCccccC--CCCC-CCCChHHHhccCCCcEEEEEccCCCCCHHHHHHHHCc
Confidence 23578999876544321 1000 001122345567777655 33444455666555555
No 479
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=65.87 E-value=30 Score=29.26 Aligned_cols=110 Identities=6% Similarity=-0.101 Sum_probs=58.6
Q ss_pred CeEEEecCCCchhHHHHHh---hcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCC
Q 027388 86 DVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (224)
Q Consensus 86 ~~iLDiGcG~G~~~~~l~~---~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (224)
.+|-=||+|. ++..++. ....+|++.|.++..++.+.+.... ..++.. ..+..++.. .
T Consensus 5 ~kIgiIGlG~--MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~-----------g~~i~~-~~s~~e~v~-----~ 65 (484)
T 4gwg_A 5 ADIALIGLAV--MGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAK-----------GTKVVG-AQSLKEMVS-----K 65 (484)
T ss_dssp BSEEEECCSH--HHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTT-----------TSSCEE-CSSHHHHHH-----T
T ss_pred CEEEEEChhH--HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccC-----------CCceec-cCCHHHHHh-----h
Confidence 3566677664 3333332 3445899999999888776654210 111111 122222211 1
Q ss_pred CCCeeEEEEccccccccCCHHHHHHHHHHHHhhccCCeEEEEE-eCCh---HHHHHHhhhcc
Q 027388 163 DAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGT-MPDA---NVIIKKLREEH 220 (224)
Q Consensus 163 ~~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~gG~li~~-~~~~---~~~~~~~~~~g 220 (224)
....|+|+..-.. ......++..+...|++|.+++-. +..+ ..+.+.+.+.|
T Consensus 66 l~~aDvVil~Vp~------~~~v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~G 121 (484)
T 4gwg_A 66 LKKPRRIILLVKA------GQAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKG 121 (484)
T ss_dssp BCSSCEEEECSCS------SHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTT
T ss_pred ccCCCEEEEecCC------hHHHHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhc
Confidence 1357888764322 245667888999999887765533 2222 34445555554
No 480
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=65.77 E-value=28 Score=26.21 Aligned_cols=82 Identities=16% Similarity=0.092 Sum_probs=50.7
Q ss_pred CCCeEEEecC-CCchhHHHHHh---hcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccc-c
Q 027388 84 RGDVVLDLAC-GKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD-K 158 (224)
Q Consensus 84 ~~~~iLDiGc-G~G~~~~~l~~---~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~ 158 (224)
.++++|=.|+ |.| ++..+++ ....+|+.++.+...++...+.+.. ....++.++.+|+.+...- .
T Consensus 21 ~~k~vlITGasg~G-IG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~---------~~~~~~~~~~~Dl~~~~~v~~ 90 (266)
T 3o38_A 21 KGKVVLVTAAAGTG-IGSTTARRALLEGADVVISDYHERRLGETRDQLAD---------LGLGRVEAVVCDVTSTEAVDA 90 (266)
T ss_dssp TTCEEEESSCSSSS-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT---------TCSSCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCCCc-hHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHh---------cCCCceEEEEeCCCCHHHHHH
Confidence 5678888887 554 3333332 3456899999999887777666541 1134588999998764310 0
Q ss_pred cc----CCCCCeeEEEEcccc
Q 027388 159 VL----ADDAPFDICSCQFAM 175 (224)
Q Consensus 159 ~~----~~~~~~D~i~~~~~l 175 (224)
.. ...+..|+++.+-.+
T Consensus 91 ~~~~~~~~~g~id~li~~Ag~ 111 (266)
T 3o38_A 91 LITQTVEKAGRLDVLVNNAGL 111 (266)
T ss_dssp HHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHhCCCcEEEECCCc
Confidence 00 012478999976543
No 481
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=65.46 E-value=16 Score=27.50 Aligned_cols=80 Identities=11% Similarity=-0.083 Sum_probs=51.3
Q ss_pred CCCeEEEecCCCchhHHHHHh---hcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccc---
Q 027388 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD--- 157 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~---~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~--- 157 (224)
.++++|=.|++.| ++..+++ ....+|++++.+...++.+.+.+.. ...++.++.+|+.+...-
T Consensus 6 ~~k~vlVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----------~~~~~~~~~~Dv~~~~~v~~~ 74 (252)
T 3h7a_A 6 RNATVAVIGAGDY-IGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEA----------AGGRIVARSLDARNEDEVTAF 74 (252)
T ss_dssp CSCEEEEECCSSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHH----------TTCEEEEEECCTTCHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh----------cCCeEEEEECcCCCHHHHHHH
Confidence 5677888887765 5554443 2456899999998887777666541 133578899998764311
Q ss_pred --cccCCCCCeeEEEEcccc
Q 027388 158 --KVLADDAPFDICSCQFAM 175 (224)
Q Consensus 158 --~~~~~~~~~D~i~~~~~l 175 (224)
..... +..|+++.+-.+
T Consensus 75 ~~~~~~~-g~id~lv~nAg~ 93 (252)
T 3h7a_A 75 LNAADAH-APLEVTIFNVGA 93 (252)
T ss_dssp HHHHHHH-SCEEEEEECCCC
T ss_pred HHHHHhh-CCceEEEECCCc
Confidence 00002 578999976543
No 482
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=65.12 E-value=23 Score=29.47 Aligned_cols=41 Identities=10% Similarity=-0.044 Sum_probs=27.9
Q ss_pred CCCeEEEecCCC-chhHHHHHhhcCCeEEEEeCChhHHHHHH
Q 027388 84 RGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCR 124 (224)
Q Consensus 84 ~~~~iLDiGcG~-G~~~~~l~~~~~~~~~gvD~s~~~~~~a~ 124 (224)
.+++|.=+|.|. |.-....+.....+|+++|+++.....+.
T Consensus 210 ~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~ 251 (436)
T 3h9u_A 210 AGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAA 251 (436)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHH
Confidence 578899998876 43333444445668999999986555443
No 483
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=64.73 E-value=21 Score=26.62 Aligned_cols=81 Identities=15% Similarity=0.018 Sum_probs=50.8
Q ss_pred CCCeEEEecCCCchhHHHHHh---hcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccc-cc
Q 027388 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD-KV 159 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~---~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~~ 159 (224)
.++++|=.|++.| ++..+++ ....+|+.+|.+...++...+.+.. ....+.++.+|+.+...- ..
T Consensus 8 ~~k~vlITGas~g-iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----------~~~~~~~~~~D~~~~~~~~~~ 76 (253)
T 3qiv_A 8 ENKVGIVTGSGGG-IGQAYAEALAREGAAVVVADINAEAAEAVAKQIVA----------DGGTAISVAVDVSDPESAKAM 76 (253)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH----------TTCEEEEEECCTTSHHHHHHH
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh----------cCCcEEEEEccCCCHHHHHHH
Confidence 5678888887655 5554443 2456899999999888777666541 133478889998764310 00
Q ss_pred c----CCCCCeeEEEEcccc
Q 027388 160 L----ADDAPFDICSCQFAM 175 (224)
Q Consensus 160 ~----~~~~~~D~i~~~~~l 175 (224)
. ...+..|+++.+-.+
T Consensus 77 ~~~~~~~~g~id~li~~Ag~ 96 (253)
T 3qiv_A 77 ADRTLAEFGGIDYLVNNAAI 96 (253)
T ss_dssp HHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHcCCCCEEEECCCc
Confidence 0 011478999976543
No 484
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=64.37 E-value=18 Score=27.29 Aligned_cols=82 Identities=10% Similarity=-0.065 Sum_probs=51.3
Q ss_pred cCCCeEEEecCCCchhHHHHHh---hcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccc-
Q 027388 83 RRGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDK- 158 (224)
Q Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~---~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~- 158 (224)
..++++|=.|++.| ++..+++ ....+|++++.+...++...+.+.. ...++.++.+|+.+...-.
T Consensus 27 l~~k~vlITGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----------~~~~~~~~~~D~~~~~~v~~ 95 (262)
T 3rkr_A 27 LSGQVAVVTGASRG-IGAAIARKLGSLGARVVLTARDVEKLRAVEREIVA----------AGGEAESHACDLSHSDAIAA 95 (262)
T ss_dssp TTTCEEEESSTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH----------TTCEEEEEECCTTCHHHHHH
T ss_pred cCCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH----------hCCceeEEEecCCCHHHHHH
Confidence 35678888887654 5555443 2456899999999887777666541 1345788899987643100
Q ss_pred cc----CCCCCeeEEEEcccc
Q 027388 159 VL----ADDAPFDICSCQFAM 175 (224)
Q Consensus 159 ~~----~~~~~~D~i~~~~~l 175 (224)
.. ...+..|+++.+-.+
T Consensus 96 ~~~~~~~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 96 FATGVLAAHGRCDVLVNNAGV 116 (262)
T ss_dssp HHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHhcCCCCEEEECCCc
Confidence 00 012478999876544
No 485
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=64.36 E-value=11 Score=31.05 Aligned_cols=105 Identities=11% Similarity=0.077 Sum_probs=57.0
Q ss_pred CCCeEEEecCCC-chhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCC
Q 027388 84 RGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (224)
Q Consensus 84 ~~~~iLDiGcG~-G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (224)
.+++|.=||+|. |......+.....+|++.|.+....+.+...- +.. ..++.++
T Consensus 190 ~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G----------------~~~-~~~l~el-------- 244 (393)
T 2nac_A 190 EAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELN----------------LTW-HATREDM-------- 244 (393)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHT----------------CEE-CSSHHHH--------
T ss_pred CCCEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchhhHhhcC----------------cee-cCCHHHH--------
Confidence 567888887775 33333333344568999998865444433221 111 1122211
Q ss_pred CCCeeEEEEccccccccCCHHHHHHHH-HHHHhhccCCeEEEEE----eCChHHHHHHhhhc
Q 027388 163 DAPFDICSCQFAMHYSWSTEARARRAL-ANVSALLRPGGTFIGT----MPDANVIIKKLREE 219 (224)
Q Consensus 163 ~~~~D~i~~~~~l~~~~~~~~~~~~~l-~~~~~~lk~gG~li~~----~~~~~~~~~~~~~~ 219 (224)
....|+|+....+.- ....++ ......||+|.+|+-. .-+...+.+.+++.
T Consensus 245 l~~aDvV~l~~Plt~------~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g 300 (393)
T 2nac_A 245 YPVCDVVTLNCPLHP------ETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESG 300 (393)
T ss_dssp GGGCSEEEECSCCCT------TTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTT
T ss_pred HhcCCEEEEecCCch------HHHHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHHcC
Confidence 246799887654321 111222 3566788887766643 22556788888764
No 486
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=64.03 E-value=29 Score=26.16 Aligned_cols=79 Identities=11% Similarity=-0.023 Sum_probs=50.7
Q ss_pred CCCeEEEecCCCchhHHHHHh---hcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccc---
Q 027388 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD--- 157 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~---~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~--- 157 (224)
.++++|=.|++.| ++..++. ....+|+.++.+...++...+.+. ....++.++.+|+.+...-
T Consensus 10 ~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~~~~Dv~~~~~v~~~ 78 (264)
T 3ucx_A 10 TDKVVVISGVGPA-LGTTLARRCAEQGADLVLAARTVERLEDVAKQVT----------DTGRRALSVGTDITDDAQVAHL 78 (264)
T ss_dssp TTCEEEEESCCTT-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH----------HTTCCEEEEECCTTCHHHHHHH
T ss_pred CCcEEEEECCCcH-HHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHH----------hcCCcEEEEEcCCCCHHHHHHH
Confidence 5678888888766 4444433 345689999999888777666554 1134588899998764310
Q ss_pred --cccCCCCCeeEEEEcc
Q 027388 158 --KVLADDAPFDICSCQF 173 (224)
Q Consensus 158 --~~~~~~~~~D~i~~~~ 173 (224)
......+..|+++.+-
T Consensus 79 ~~~~~~~~g~id~lv~nA 96 (264)
T 3ucx_A 79 VDETMKAYGRVDVVINNA 96 (264)
T ss_dssp HHHHHHHTSCCSEEEECC
T ss_pred HHHHHHHcCCCcEEEECC
Confidence 0000125789998765
No 487
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=64.03 E-value=8.7 Score=30.95 Aligned_cols=69 Identities=19% Similarity=0.066 Sum_probs=41.3
Q ss_pred CCCeEEEecCCC-chhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccc-cccccC
Q 027388 84 RGDVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVH-LDKVLA 161 (224)
Q Consensus 84 ~~~~iLDiGcG~-G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~~ 161 (224)
+..+||=+|||. |......+. ....++.+|.+...++.++.. +..+..|+.+.. +..
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~-~~~~v~~~~~~~~~~~~~~~~-----------------~~~~~~d~~d~~~l~~--- 73 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLK-DEFDVYIGDVNNENLEKVKEF-----------------ATPLKVDASNFDKLVE--- 73 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHT-TTSEEEEEESCHHHHHHHTTT-----------------SEEEECCTTCHHHHHH---
T ss_pred CccEEEEECCCHHHHHHHHHHh-cCCCeEEEEcCHHHHHHHhcc-----------------CCcEEEecCCHHHHHH---
Confidence 456899999953 444433332 334788999999877776543 344556665432 111
Q ss_pred CCCCeeEEEEcc
Q 027388 162 DDAPFDICSCQF 173 (224)
Q Consensus 162 ~~~~~D~i~~~~ 173 (224)
.-.++|+|++..
T Consensus 74 ~~~~~DvVi~~~ 85 (365)
T 3abi_A 74 VMKEFELVIGAL 85 (365)
T ss_dssp HHTTCSEEEECC
T ss_pred HHhCCCEEEEec
Confidence 125789998654
No 488
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=63.86 E-value=36 Score=26.12 Aligned_cols=88 Identities=15% Similarity=0.064 Sum_probs=49.0
Q ss_pred CeEEEecCCC-chhHHHHHhhcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCCCC
Q 027388 86 DVVLDLACGK-GGDLIKWDKAKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADDA 164 (224)
Q Consensus 86 ~~iLDiGcG~-G~~~~~l~~~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~ 164 (224)
.+|.=||+|. |......+.....+|+++|.++...+.+.+.- +.. ..+..+. ..
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g----------------~~~-~~~~~~~--------~~ 60 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAG----------------AET-ASTAKAI--------AE 60 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT----------------CEE-CSSHHHH--------HH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCC----------------Cee-cCCHHHH--------Hh
Confidence 4688899876 33222222234457999999988776654420 111 1121111 13
Q ss_pred CeeEEEEccccccccCCHHHHHHHH---HHHHhhccCCeEEEE
Q 027388 165 PFDICSCQFAMHYSWSTEARARRAL---ANVSALLRPGGTFIG 204 (224)
Q Consensus 165 ~~D~i~~~~~l~~~~~~~~~~~~~l---~~~~~~lk~gG~li~ 204 (224)
.+|+|+..-. .......++ ..+...+++|..++-
T Consensus 61 ~~D~vi~~v~------~~~~~~~~~~~~~~l~~~l~~~~~vv~ 97 (299)
T 1vpd_A 61 QCDVIITMLP------NSPHVKEVALGENGIIEGAKPGTVLID 97 (299)
T ss_dssp HCSEEEECCS------SHHHHHHHHHSTTCHHHHCCTTCEEEE
T ss_pred CCCEEEEECC------CHHHHHHHHhCcchHhhcCCCCCEEEE
Confidence 4788876532 123445566 567778888876643
No 489
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=63.73 E-value=25 Score=27.30 Aligned_cols=80 Identities=13% Similarity=0.067 Sum_probs=51.5
Q ss_pred CCCeEEEecCCCchhHHHHHh---hcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccc-cc
Q 027388 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD-KV 159 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~---~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~~ 159 (224)
.++++|=.|++.| ++..++. ....+|++++.+...++.+.+.+.. ...++.++.+|+.+.... ..
T Consensus 30 ~gk~vlVTGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~----------~~~~~~~~~~Dv~d~~~v~~~ 98 (301)
T 3tjr_A 30 DGRAAVVTGGASG-IGLATATEFARRGARLVLSDVDQPALEQAVNGLRG----------QGFDAHGVVCDVRHLDEMVRL 98 (301)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH----------TTCCEEEEECCTTCHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh----------cCCceEEEEccCCCHHHHHHH
Confidence 5678888888765 5554443 2456899999999888777666541 134588899998764311 00
Q ss_pred c----CCCCCeeEEEEccc
Q 027388 160 L----ADDAPFDICSCQFA 174 (224)
Q Consensus 160 ~----~~~~~~D~i~~~~~ 174 (224)
. ...+..|+++.+-.
T Consensus 99 ~~~~~~~~g~id~lvnnAg 117 (301)
T 3tjr_A 99 ADEAFRLLGGVDVVFSNAG 117 (301)
T ss_dssp HHHHHHHHSSCSEEEECCC
T ss_pred HHHHHHhCCCCCEEEECCC
Confidence 0 01247899997654
No 490
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=63.63 E-value=26 Score=26.95 Aligned_cols=87 Identities=13% Similarity=-0.044 Sum_probs=49.5
Q ss_pred CeEEEecCCCchhHHHHHh---hcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCC
Q 027388 86 DVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLAD 162 (224)
Q Consensus 86 ~~iLDiGcG~G~~~~~l~~---~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 162 (224)
.+|.=||+|. ++..++. ....+|++.|.++...+.+.+.- +.. ..+..+.
T Consensus 2 ~~i~iIG~G~--mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g----------------~~~-~~~~~~~-------- 54 (287)
T 3pef_A 2 QKFGFIGLGI--MGSAMAKNLVKAGCSVTIWNRSPEKAEELAALG----------------AER-AATPCEV-------- 54 (287)
T ss_dssp CEEEEECCSH--HHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTT----------------CEE-CSSHHHH--------
T ss_pred CEEEEEeecH--HHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCC----------------Cee-cCCHHHH--------
Confidence 3566777765 3333322 34458999999998777665431 111 1122111
Q ss_pred CCCeeEEEEccccccccCCHHHHHHHH---HHHHhhccCCeEEEEE
Q 027388 163 DAPFDICSCQFAMHYSWSTEARARRAL---ANVSALLRPGGTFIGT 205 (224)
Q Consensus 163 ~~~~D~i~~~~~l~~~~~~~~~~~~~l---~~~~~~lk~gG~li~~ 205 (224)
....|+|+..-. .......++ ..+...+++|..++-.
T Consensus 55 ~~~aDvvi~~vp------~~~~~~~v~~~~~~l~~~l~~~~~vi~~ 94 (287)
T 3pef_A 55 VESCPVTFAMLA------DPAAAEEVCFGKHGVLEGIGEGRGYVDM 94 (287)
T ss_dssp HHHCSEEEECCS------SHHHHHHHHHSTTCHHHHCCTTCEEEEC
T ss_pred HhcCCEEEEEcC------CHHHHHHHHcCcchHhhcCCCCCEEEeC
Confidence 134688875432 124556666 7777888888766543
No 491
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=63.57 E-value=7.7 Score=29.53 Aligned_cols=34 Identities=21% Similarity=0.224 Sum_probs=23.3
Q ss_pred CCCeEEEecCCC-chhH-HHHHhhcCCeEEEEeCCh
Q 027388 84 RGDVVLDLACGK-GGDL-IKWDKAKIGYYVGIDIAE 117 (224)
Q Consensus 84 ~~~~iLDiGcG~-G~~~-~~l~~~~~~~~~gvD~s~ 117 (224)
.+.+|+=+|||. |... ..|+..+.++++.+|.+.
T Consensus 30 ~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 30 KDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred hCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 357899999974 3333 334344667999999887
No 492
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=63.49 E-value=8.4 Score=30.69 Aligned_cols=102 Identities=10% Similarity=0.001 Sum_probs=54.4
Q ss_pred CCCeEEEecCCCchhHHHHHh---hcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccccccccc
Q 027388 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVL 160 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~---~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 160 (224)
.+++|.=||+|. ++..++. ....+|+++|.+....+.+... .+.+. ++.+.
T Consensus 154 ~g~~vgIIG~G~--iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~----------------g~~~~--~l~e~------ 207 (330)
T 2gcg_A 154 TQSTVGIIGLGR--IGQAIARRLKPFGVQRFLYTGRQPRPEEAAEF----------------QAEFV--STPEL------ 207 (330)
T ss_dssp TTCEEEEECCSH--HHHHHHHHHGGGTCCEEEEESSSCCHHHHHTT----------------TCEEC--CHHHH------
T ss_pred CCCEEEEECcCH--HHHHHHHHHHHCCCEEEEECCCCcchhHHHhc----------------CceeC--CHHHH------
Confidence 456788888764 4443332 3445899999877544433211 12221 32221
Q ss_pred CCCCCeeEEEEccccccccCCHHHHHHHH-HHHHhhccCCeEEEEE----eCChHHHHHHhhhc
Q 027388 161 ADDAPFDICSCQFAMHYSWSTEARARRAL-ANVSALLRPGGTFIGT----MPDANVIIKKLREE 219 (224)
Q Consensus 161 ~~~~~~D~i~~~~~l~~~~~~~~~~~~~l-~~~~~~lk~gG~li~~----~~~~~~~~~~~~~~ 219 (224)
....|+|+..-...- ....++ .++...+++|.+|+-. ..+...+.+.+.+.
T Consensus 208 --l~~aDvVi~~vp~~~------~t~~~i~~~~~~~mk~gailIn~srg~~v~~~aL~~aL~~~ 263 (330)
T 2gcg_A 208 --AAQSDFIVVACSLTP------ATEGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASG 263 (330)
T ss_dssp --HHHCSEEEECCCCCT------TTTTCBSHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHT
T ss_pred --HhhCCEEEEeCCCCh------HHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHcC
Confidence 135788887653320 111112 3456678888777532 12446788877764
No 493
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=63.45 E-value=37 Score=26.15 Aligned_cols=112 Identities=11% Similarity=-0.064 Sum_probs=61.6
Q ss_pred cCCCeEEEecCCCc-hhHHHHHh---hcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccc-
Q 027388 83 RRGDVVLDLACGKG-GDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD- 157 (224)
Q Consensus 83 ~~~~~iLDiGcG~G-~~~~~l~~---~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~- 157 (224)
..++++|=.|++.| .++..+++ ....+|+.++.++...+.+.+... . ...+.++.+|+.+...-
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~----------~-~~~~~~~~~Dv~d~~~v~ 97 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAE----------E-LGAFVAGHCDVADAASID 97 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHH----------H-HTCEEEEECCTTCHHHHH
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHH----------h-cCCceEEECCCCCHHHHH
Confidence 35778898887633 13333332 345689999988755544443322 0 11377888998764310
Q ss_pred cc----cCCCCCeeEEEEcccccc-------c-cCCHHHH-----------HHHHHHHHhhccCCeEEEEE
Q 027388 158 KV----LADDAPFDICSCQFAMHY-------S-WSTEARA-----------RRALANVSALLRPGGTFIGT 205 (224)
Q Consensus 158 ~~----~~~~~~~D~i~~~~~l~~-------~-~~~~~~~-----------~~~l~~~~~~lk~gG~li~~ 205 (224)
.. ...-+..|+++.+-.+.. + ..+.++. ..+++.+...++.+|.++..
T Consensus 98 ~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~i 168 (293)
T 3grk_A 98 AVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTL 168 (293)
T ss_dssp HHHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEE
Confidence 00 001257899997654321 0 1123332 23445666677778877754
No 494
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=63.12 E-value=40 Score=24.31 Aligned_cols=98 Identities=8% Similarity=-0.061 Sum_probs=55.4
Q ss_pred eEEEecCCCchhHHHHHh---hcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccCCC
Q 027388 87 VVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLADD 163 (224)
Q Consensus 87 ~iLDiGcG~G~~~~~l~~---~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 163 (224)
+||=.|+ +|.++..++. ....+|++++-++..+... . ...+.++.+|+.+... . ..
T Consensus 2 kilVtGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~----~------------~~~~~~~~~D~~d~~~-~---~~ 60 (224)
T 3h2s_A 2 KIAVLGA-TGRAGSAIVAEARRRGHEVLAVVRDPQKAADR----L------------GATVATLVKEPLVLTE-A---DL 60 (224)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----T------------CTTSEEEECCGGGCCH-H---HH
T ss_pred EEEEEcC-CCHHHHHHHHHHHHCCCEEEEEEecccccccc----c------------CCCceEEecccccccH-h---hc
Confidence 4665664 4555555443 3456899999887654422 1 2247889999876543 1 23
Q ss_pred CCeeEEEEccccccccCCHHHHHHHHHHHHhhccC-CeEEEEE
Q 027388 164 APFDICSCQFAMHYSWSTEARARRALANVSALLRP-GGTFIGT 205 (224)
Q Consensus 164 ~~~D~i~~~~~l~~~~~~~~~~~~~l~~~~~~lk~-gG~li~~ 205 (224)
..+|+|+.+....+-.............+.+.++. |+.+++.
T Consensus 61 ~~~d~vi~~ag~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~ 103 (224)
T 3h2s_A 61 DSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFI 103 (224)
T ss_dssp TTCSEEEECCCCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEE
T ss_pred ccCCEEEECCccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEE
Confidence 57899987665432111123334445566666654 4555543
No 495
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=62.56 E-value=29 Score=28.16 Aligned_cols=87 Identities=14% Similarity=0.038 Sum_probs=51.5
Q ss_pred CCCeEEEecCCCchhHHHHHh----hcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccc
Q 027388 84 RGDVVLDLACGKGGDLIKWDK----AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKV 159 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~----~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 159 (224)
.+++||=.|++ |.++..+++ .+...+++++.++..+....+.+... .......+.++.+|+.+......
T Consensus 34 ~~k~vLVTGat-G~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~v~~~~~Dl~d~~~~~~ 106 (399)
T 3nzo_A 34 SQSRFLVLGGA-GSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSS------FGYINGDFQTFALDIGSIEYDAF 106 (399)
T ss_dssp HTCEEEEETTT-SHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHH------TCCCSSEEEEECCCTTSHHHHHH
T ss_pred CCCEEEEEcCC-hHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHh------cCCCCCcEEEEEEeCCCHHHHHH
Confidence 46788877754 555555543 23368999999988776655544310 00112458889999876432111
Q ss_pred cCCCCCeeEEEEcccccc
Q 027388 160 LADDAPFDICSCQFAMHY 177 (224)
Q Consensus 160 ~~~~~~~D~i~~~~~l~~ 177 (224)
......+|+|+......+
T Consensus 107 ~~~~~~~D~Vih~Aa~~~ 124 (399)
T 3nzo_A 107 IKADGQYDYVLNLSALKH 124 (399)
T ss_dssp HHHCCCCSEEEECCCCCC
T ss_pred HHHhCCCCEEEECCCcCC
Confidence 112367999997655433
No 496
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=62.16 E-value=39 Score=25.63 Aligned_cols=111 Identities=13% Similarity=0.006 Sum_probs=59.6
Q ss_pred CCCeEEEecCCCchhHHHHHh---hcCCeEEEE-eCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccc-c
Q 027388 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGI-DIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD-K 158 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~---~~~~~~~gv-D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~ 158 (224)
.++++|=.|++.| ++..++. ....+++.+ ..+....+...+.+. ....++.++.+|+.+...- .
T Consensus 26 ~~k~~lVTGas~G-IG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~Dl~~~~~v~~ 94 (267)
T 3u5t_A 26 TNKVAIVTGASRG-IGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIE----------AAGGKALTAQADVSDPAAVRR 94 (267)
T ss_dssp -CCEEEEESCSSH-HHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHH----------HTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH----------hcCCeEEEEEcCCCCHHHHHH
Confidence 5678888887765 5544433 234577766 445555555444433 1134578889998764310 0
Q ss_pred cc----CCCCCeeEEEEccccccc----cCCHHHHH-----------HHHHHHHhhccCCeEEEEE
Q 027388 159 VL----ADDAPFDICSCQFAMHYS----WSTEARAR-----------RALANVSALLRPGGTFIGT 205 (224)
Q Consensus 159 ~~----~~~~~~D~i~~~~~l~~~----~~~~~~~~-----------~~l~~~~~~lk~gG~li~~ 205 (224)
.. ...+..|+++.+-.+... ..+.++.. .+++.+...++++|.++..
T Consensus 95 ~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~i 160 (267)
T 3u5t_A 95 LFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINM 160 (267)
T ss_dssp HHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEE
Confidence 00 012579999976543211 01222222 2455666677777877764
No 497
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=62.04 E-value=36 Score=26.08 Aligned_cols=81 Identities=14% Similarity=-0.002 Sum_probs=51.4
Q ss_pred CCCeEEEecCCCchhHHHHHh---hcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccc-cc
Q 027388 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD-KV 159 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~---~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~~ 159 (224)
.++++|=.|++.| ++..++. ....+|+.++.+...++...+.+.. ....+.++.+|+.+.... ..
T Consensus 27 ~~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~----------~~~~~~~~~~Dv~d~~~v~~~ 95 (283)
T 3v8b_A 27 PSPVALITGAGSG-IGRATALALAADGVTVGALGRTRTEVEEVADEIVG----------AGGQAIALEADVSDELQMRNA 95 (283)
T ss_dssp CCCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTT----------TTCCEEEEECCTTCHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh----------cCCcEEEEEccCCCHHHHHHH
Confidence 5678888887665 5554443 2456899999999888777666541 234578889998764210 00
Q ss_pred c----CCCCCeeEEEEcccc
Q 027388 160 L----ADDAPFDICSCQFAM 175 (224)
Q Consensus 160 ~----~~~~~~D~i~~~~~l 175 (224)
. ...+..|+++.+-.+
T Consensus 96 ~~~~~~~~g~iD~lVnnAg~ 115 (283)
T 3v8b_A 96 VRDLVLKFGHLDIVVANAGI 115 (283)
T ss_dssp HHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHhCCCCEEEECCCC
Confidence 0 012578999876543
No 498
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=61.95 E-value=28 Score=26.67 Aligned_cols=82 Identities=9% Similarity=-0.132 Sum_probs=50.9
Q ss_pred CCCeEEEecCCCchhHHHHHh---hcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEecccccc-ccc-c
Q 027388 84 RGDVVLDLACGKGGDLIKWDK---AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEV-HLD-K 158 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~---~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~~-~ 158 (224)
.++++|=.|++.| ++..+++ ....+|++++.+....+.+.+.+.. ....++.++.+|+.+. ... .
T Consensus 11 ~~k~vlITGas~G-IG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~---------~~~~~~~~~~~Dl~~~~~~v~~ 80 (311)
T 3o26_A 11 KRRCAVVTGGNKG-IGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKN---------SNHENVVFHQLDVTDPIATMSS 80 (311)
T ss_dssp -CCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT---------TTCCSEEEEECCTTSCHHHHHH
T ss_pred CCcEEEEecCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---------cCCCceEEEEccCCCcHHHHHH
Confidence 5677887777655 5555443 2456899999999877776666542 1233588999998764 210 0
Q ss_pred c----cCCCCCeeEEEEcccc
Q 027388 159 V----LADDAPFDICSCQFAM 175 (224)
Q Consensus 159 ~----~~~~~~~D~i~~~~~l 175 (224)
. ....+.+|+++.+-.+
T Consensus 81 ~~~~~~~~~g~iD~lv~nAg~ 101 (311)
T 3o26_A 81 LADFIKTHFGKLDILVNNAGV 101 (311)
T ss_dssp HHHHHHHHHSSCCEEEECCCC
T ss_pred HHHHHHHhCCCCCEEEECCcc
Confidence 0 0012579999977654
No 499
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=61.95 E-value=31 Score=26.54 Aligned_cols=83 Identities=10% Similarity=-0.105 Sum_probs=51.2
Q ss_pred CCCeEEEecCCCchhHHHHHh----hcC--CeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccc
Q 027388 84 RGDVVLDLACGKGGDLIKWDK----AKI--GYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLD 157 (224)
Q Consensus 84 ~~~~iLDiGcG~G~~~~~l~~----~~~--~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 157 (224)
.++++|=.|++.| ++..++. .+. ..|+.++.+...++.+.+.+.. .....++.++.+|+.+....
T Consensus 32 ~~k~~lVTGas~G-IG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~--------~~~~~~~~~~~~Dv~d~~~v 102 (287)
T 3rku_A 32 AKKTVLITGASAG-IGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQ--------EFPNAKVHVAQLDITQAEKI 102 (287)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHH--------HCTTCEEEEEECCTTCGGGH
T ss_pred CCCEEEEecCCCh-HHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHh--------hCCCCeEEEEECCCCCHHHH
Confidence 5788898887765 5554443 222 3899999999887776665431 11133478889998764311
Q ss_pred -----cccCCCCCeeEEEEcccc
Q 027388 158 -----KVLADDAPFDICSCQFAM 175 (224)
Q Consensus 158 -----~~~~~~~~~D~i~~~~~l 175 (224)
.....-+..|+++.+-.+
T Consensus 103 ~~~~~~~~~~~g~iD~lVnnAG~ 125 (287)
T 3rku_A 103 KPFIENLPQEFKDIDILVNNAGK 125 (287)
T ss_dssp HHHHHTSCGGGCSCCEEEECCCC
T ss_pred HHHHHHHHHhcCCCCEEEECCCc
Confidence 010022579999976543
No 500
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=61.88 E-value=11 Score=30.25 Aligned_cols=104 Identities=17% Similarity=0.208 Sum_probs=55.5
Q ss_pred CCCeEEEecCCC-chhHHHHHh-hcCCeEEEEeCChhHHHHHHHhccCCcccccccccCCCCeeEEeccccccccccccC
Q 027388 84 RGDVVLDLACGK-GGDLIKWDK-AKIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKFSFPARLICGDCYEVHLDKVLA 161 (224)
Q Consensus 84 ~~~~iLDiGcG~-G~~~~~l~~-~~~~~~~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 161 (224)
.+++|.=||+|. |......+. ....+++++|.++...+.+.+. . +.+. .++.++
T Consensus 162 ~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~-g---------------~~~~-~~l~el------- 217 (348)
T 2w2k_A 162 RGHVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKAL-G---------------AERV-DSLEEL------- 217 (348)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHH-T---------------CEEC-SSHHHH-------
T ss_pred CCCEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhc-C---------------cEEe-CCHHHH-------
Confidence 567888898865 333333333 3445899999987655544322 1 2221 122211
Q ss_pred CCCCeeEEEEccccccccCCHHHHHHHH-HHHHhhccCCeEEEEE----eCChHHHHHHhhh
Q 027388 162 DDAPFDICSCQFAMHYSWSTEARARRAL-ANVSALLRPGGTFIGT----MPDANVIIKKLRE 218 (224)
Q Consensus 162 ~~~~~D~i~~~~~l~~~~~~~~~~~~~l-~~~~~~lk~gG~li~~----~~~~~~~~~~~~~ 218 (224)
....|+|+..-... .+...++ .+....+++|.+|+-. ..+...+.+.+.+
T Consensus 218 -l~~aDvVil~vp~~------~~t~~li~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~ 272 (348)
T 2w2k_A 218 -ARRSDCVSVSVPYM------KLTHHLIDEAFFAAMKPGSRIVNTARGPVISQDALIAALKS 272 (348)
T ss_dssp -HHHCSEEEECCCCS------GGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHT
T ss_pred -hccCCEEEEeCCCC------hHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHh
Confidence 13578888764332 1111122 2455678888776532 1244677777775
Done!