BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027389
(224 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LMP7|GOS11_ARATH Golgi SNAP receptor complex member 1-1 OS=Arabidopsis thaliana
GN=GOS11 PE=2 SV=1
Length = 223
Score = 392 bits (1007), Expect = e-109, Method: Compositional matrix adjust.
Identities = 190/224 (84%), Positives = 207/224 (92%), Gaps = 1/224 (0%)
Query: 1 MDVPSSWDALRKQARKLEAQLDEQMHSYRKLVSSKGSTKVDAAENDLESGIDWLLKQLQQ 60
MDVPSSWDALRKQARK+EAQLDEQMHSYR+LVS+K +K D E+DLE+GID LL+QLQQ
Sbjct: 1 MDVPSSWDALRKQARKIEAQLDEQMHSYRRLVSTKALSKSDGNESDLEAGIDLLLRQLQQ 60
Query: 61 VNIQMQDWVSSGGSEMVSHTLTRHQEILQDLTQEFYRLRSSLKAKQEHASLLEDFREFDR 120
VN QMQ WVSSGGSEMVSHTLTRHQEILQDLTQEFYR RSSL+AKQEHASLLEDFREFDR
Sbjct: 61 VNAQMQAWVSSGGSEMVSHTLTRHQEILQDLTQEFYRHRSSLRAKQEHASLLEDFREFDR 120
Query: 121 TRLDLEDGVGSPEQALLKEHASINRSTGQMDSVISQAQATLGALVFQRSTFGGINSKLSN 180
TRLDLEDG GS EQAL+KEH INR+T QMD VISQAQATLG LVFQRSTFGGINSKLSN
Sbjct: 121 TRLDLEDGYGS-EQALIKEHMGINRNTAQMDGVISQAQATLGTLVFQRSTFGGINSKLSN 179
Query: 181 VSSRLPSVNQILSSIKRKKSMDTIILALVASVCTFLIFIYWVTK 224
V+SRLP+VN IL++IKRKKSMDTIIL+LVA+VCTFLIFIYW+TK
Sbjct: 180 VASRLPTVNTILAAIKRKKSMDTIILSLVAAVCTFLIFIYWITK 223
>sp|O22151|GOS12_ARATH Golgi SNAP receptor complex member 1-2 OS=Arabidopsis thaliana
GN=GOS12 PE=1 SV=2
Length = 257
Score = 140 bits (352), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 133/253 (52%), Gaps = 39/253 (15%)
Query: 5 SSWDALRKQARKLEAQLDEQMHSYRKLVS--SKGSTK-----------------VDAAEN 45
S W+ LR++ARK+E LD ++ SY KL + ++G T VD
Sbjct: 11 SGWEELRREARKIEGDLDVKLSSYAKLGARFTQGDTDLVMNYEKVLKCVLVSGYVDTGSP 70
Query: 46 DLESGIDW---------LLKQLQQVNIQMQDWVSSGG-SEMVSHTLTRHQEILQDLTQEF 95
+ SG W LL++L +N M +S + V+ L RH++IL + TQEF
Sbjct: 71 TVGSGRSWKSMEMEIQSLLEKLLDINDSMSRCAASAAPTTSVTQKLARHRDILHEYTQEF 130
Query: 96 YRLRSSLKAKQEHASLL----EDFREFDRTRLDLEDGVGSPEQALLKEHASINRSTGQMD 151
R++ ++ + +EHA LL +D E+ + G SP +L+E ASI+ S +D
Sbjct: 131 RRIKGNINSLREHAELLSSVRDDISEYKAS------GSMSPGVQVLRERASIHGSISHID 184
Query: 152 SVISQAQATLGALVFQRSTFGGINSKLSNVSSRLPSVNQILSSIKRKKSMDTIILALVAS 211
VI QAQAT L QRS F + K+ N+ + P + +L SIKRK+S DT+IL+ V +
Sbjct: 185 DVIGQAQATRAVLGSQRSLFSDVQGKVKNLGDKFPVIRGLLGSIKRKRSRDTLILSAVIA 244
Query: 212 VCTFLIFIYWVTK 224
CT + IYW++K
Sbjct: 245 ACTLFLIIYWLSK 257
>sp|O95249|GOSR1_HUMAN Golgi SNAP receptor complex member 1 OS=Homo sapiens GN=GOSR1 PE=1
SV=1
Length = 250
Score = 112 bits (280), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 37/247 (14%)
Query: 5 SSWDALRKQARKLEAQLDEQMHSYRKLVSSKGSTKVDAAENDLESG-------------- 50
S W+ LRKQAR+LE +LD ++ S+ KL +S + D S
Sbjct: 7 SYWEDLRKQARQLENELDLKLVSFSKLCTSYSHSSTRDGRRDRYSSDTTPLLNGSSQDRM 66
Query: 51 -------IDWLLKQLQQVNIQMQDWVSSGG----SEMVSHTLTRHQEILQDLTQEFYRLR 99
I+ LL +L VN +M ++ +S G + + HTL RH++ILQD T EF++ +
Sbjct: 67 FETMAIEIEQLLARLTGVNDKMAEYTNSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTK 126
Query: 100 SSLKAKQEHASLLEDFREFDRTRLDLED-----GVGSPEQAL-LKEHASINRSTGQMDSV 153
++ A +E +L+ R+ D+E GV + L LKEH + S ++
Sbjct: 127 ANFMAIRERENLMGSVRK------DIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEET 180
Query: 154 ISQAQATLGALVFQRSTFGGINSKLSNVSSRLPSVNQILSSIKRKKSMDTIILALVASVC 213
IS A AT + QR I+SK++ +++R P+VN ++ I +K D++IL V +C
Sbjct: 181 ISIAMATKENMTSQRGMLKSIHSKMNTLANRFPAVNSLIQRINLRKRRDSLILGGVIGIC 240
Query: 214 TFLIFIY 220
T L+ +Y
Sbjct: 241 TILLLLY 247
>sp|Q2TBU3|GOSR1_BOVIN Golgi SNAP receptor complex member 1 OS=Bos taurus GN=GOSR1 PE=2
SV=1
Length = 250
Score = 111 bits (278), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 123/245 (50%), Gaps = 37/245 (15%)
Query: 7 WDALRKQARKLEAQLDEQMHSYRKLVSSKGSTKVDAAENDLESG---------------- 50
W+ LRKQAR+LE +LD ++ S+ KL +S + D S
Sbjct: 9 WEDLRKQARQLENELDLKLVSFSKLCTSYSHSSARDGRRDRYSSDTTPLLNGSSQDRMFE 68
Query: 51 -----IDWLLKQLQQVNIQMQDWVSSGG----SEMVSHTLTRHQEILQDLTQEFYRLRSS 101
I+ LL +L +N +M ++ SS G + + HTL RH++ILQD T EF++ +++
Sbjct: 69 TMAIEIEQLLARLTGINDKMAEYTSSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKAN 128
Query: 102 LKAKQEHASLLEDFREFDRTRLDLED-----GVGSPEQAL-LKEHASINRSTGQMDSVIS 155
A +E +L+ R+ D+E GV + L LKEH + S ++ IS
Sbjct: 129 FVAIRERENLMGSVRK------DIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETIS 182
Query: 156 QAQATLGALVFQRSTFGGINSKLSNVSSRLPSVNQILSSIKRKKSMDTIILALVASVCTF 215
A AT + QR I SK++ +++R P+VN ++ I +K D++IL V VCT
Sbjct: 183 IAMATKENMTSQRGMLKSIQSKMNTLANRFPAVNSLIQRINLRKRRDSLILGGVIGVCTI 242
Query: 216 LIFIY 220
L+ +Y
Sbjct: 243 LLLLY 247
>sp|O08522|GOSR1_CRIGR Golgi SNAP receptor complex member 1 OS=Cricetulus griseus GN=GOSR1
PE=1 SV=1
Length = 250
Score = 111 bits (278), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 127/245 (51%), Gaps = 37/245 (15%)
Query: 7 WDALRKQARKLEAQLDEQMHSYRKLVSS--------KGSTKVDAAENDLESG-------- 50
W+ LRKQAR+LE +LD ++ S+ KL +S G + + L +G
Sbjct: 9 WEDLRKQARQLENELDLKLVSFSKLCTSYSHSSARDGGRDRYSSDTTPLLNGSSQDRMFE 68
Query: 51 -----IDWLLKQLQQVNIQMQDWVSSGG----SEMVSHTLTRHQEILQDLTQEFYRLRSS 101
I+ LL +L VN +M ++ +S G + + HTL RH++ILQD T EF++ +++
Sbjct: 69 TMAIEIEQLLARLTGVNDKMAEYTNSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKAN 128
Query: 102 LKAKQEHASLLEDFREFDRTRLDLED-----GVGSPEQAL-LKEHASINRSTGQMDSVIS 155
A +E +L+ R+ D+E GV + L LKEH + S ++ IS
Sbjct: 129 FMAIRERENLMGSVRK------DIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETIS 182
Query: 156 QAQATLGALVFQRSTFGGINSKLSNVSSRLPSVNQILSSIKRKKSMDTIILALVASVCTF 215
A AT + QR I+SK++ +++R P+VN ++ I +K D++IL V +CT
Sbjct: 183 IAMATKENMTSQRGMLKSIHSKMNTLANRFPAVNSLIQRINLRKRRDSLILGGVIGICTI 242
Query: 216 LIFIY 220
L+ +Y
Sbjct: 243 LLLLY 247
>sp|O88630|GOSR1_MOUSE Golgi SNAP receptor complex member 1 OS=Mus musculus GN=Gosr1 PE=1
SV=2
Length = 250
Score = 110 bits (276), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 126/245 (51%), Gaps = 37/245 (15%)
Query: 7 WDALRKQARKLEAQLDEQMHSYRKLVSS--------KGSTKVDAAENDLESG-------- 50
W+ LRKQAR+LE +LD ++ S+ KL +S G + + L +G
Sbjct: 9 WEDLRKQARQLENELDLKLVSFSKLCTSYSHSGSRDGGRDRYSSDTTPLLNGSSQDRMFE 68
Query: 51 -----IDWLLKQLQQVNIQMQDWVSSGG----SEMVSHTLTRHQEILQDLTQEFYRLRSS 101
I+ LL +L VN +M ++ S G + + HTL RH++ILQD T EF++ +++
Sbjct: 69 TMAIEIEQLLARLTGVNDKMAEYTHSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKAN 128
Query: 102 LKAKQEHASLLEDFREFDRTRLDLED-----GVGSPEQAL-LKEHASINRSTGQMDSVIS 155
A +E +L+ R+ D+E GV + L LKEH + S ++ IS
Sbjct: 129 FTAIRERENLMGSVRK------DIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETIS 182
Query: 156 QAQATLGALVFQRSTFGGINSKLSNVSSRLPSVNQILSSIKRKKSMDTIILALVASVCTF 215
A AT + QR I+SK++ +++R P+VN ++ I +K D++IL V +CT
Sbjct: 183 IAMATKENMTSQRGMLKSIHSKMNTLANRFPAVNSLIQRINLRKRRDSLILGGVIGICTI 242
Query: 216 LIFIY 220
L+ +Y
Sbjct: 243 LLLLY 247
>sp|Q62931|GOSR1_RAT Golgi SNAP receptor complex member 1 OS=Rattus norvegicus GN=Gosr1
PE=1 SV=1
Length = 250
Score = 110 bits (276), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 126/245 (51%), Gaps = 37/245 (15%)
Query: 7 WDALRKQARKLEAQLDEQMHSYRKLVSS--------KGSTKVDAAENDLESG-------- 50
W+ LRKQAR+LE +LD ++ S+ KL +S G + + L +G
Sbjct: 9 WEDLRKQARQLENELDLKLVSFSKLCTSYSHSSARDGGRDRYSSDTTPLLNGSSQDRMFE 68
Query: 51 -----IDWLLKQLQQVNIQMQDWVSSGG----SEMVSHTLTRHQEILQDLTQEFYRLRSS 101
I+ LL +L VN +M ++ S G + + HTL RH++ILQD T EF++ +++
Sbjct: 69 TMAIEIEQLLARLTGVNDKMAEYTHSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKAN 128
Query: 102 LKAKQEHASLLEDFREFDRTRLDLED-----GVGSPEQAL-LKEHASINRSTGQMDSVIS 155
A +E +L+ R+ D+E GV + L LKEH + S ++ IS
Sbjct: 129 FMAIRERENLMGSVRK------DIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETIS 182
Query: 156 QAQATLGALVFQRSTFGGINSKLSNVSSRLPSVNQILSSIKRKKSMDTIILALVASVCTF 215
A AT + QR I+SK++ +++R P+VN ++ I +K D++IL V +CT
Sbjct: 183 IAMATKENMTSQRGMLKSIHSKMNTLANRFPAVNSLIQRINLRKRRDSLILGGVIGICTI 242
Query: 216 LIFIY 220
L+ +Y
Sbjct: 243 LLLLY 247
>sp|Q5RBL6|GOSR1_PONAB Golgi SNAP receptor complex member 1 OS=Pongo abelii GN=GOSR1 PE=2
SV=1
Length = 248
Score = 110 bits (275), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 126/243 (51%), Gaps = 35/243 (14%)
Query: 7 WDALRKQARKLEAQLDEQMHSYRKLVSSKGSTKVDAAEND------LESG---------- 50
W+ LRKQAR+LE +LD ++ S+ KL +S + D L +G
Sbjct: 9 WEDLRKQARQLENELDLKLVSFSKLCTSYSHSSTRDGRRDSSDTTPLLNGSSQDRMFETM 68
Query: 51 ---IDWLLKQLQQVNIQMQDWVSSGG----SEMVSHTLTRHQEILQDLTQEFYRLRSSLK 103
I+ LL +L VN +M ++ +S G + + HTL RH++ILQD T EF++ +++
Sbjct: 69 AIEIEQLLARLTGVNDKMAEYTNSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKANFM 128
Query: 104 AKQEHASLLEDFREFDRTRLDLED-----GVGSPEQAL-LKEHASINRSTGQMDSVISQA 157
+ +E +L+ R+ D+E GV + L LKEH + S ++ IS A
Sbjct: 129 SIRERENLMGSVRK------DIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETISIA 182
Query: 158 QATLGALVFQRSTFGGINSKLSNVSSRLPSVNQILSSIKRKKSMDTIILALVASVCTFLI 217
AT + QR I+SK++ +++R P+VN ++ I +K D++IL V +CT L+
Sbjct: 183 MATKENMTSQRGMLKSIHSKMNTLANRFPAVNSLIQRINLRKRRDSLILGGVIGICTILL 242
Query: 218 FIY 220
+Y
Sbjct: 243 LLY 245
>sp|Q95ZW1|GOSR1_CAEEL Golgi SNAP receptor complex member 1 OS=Caenorhabditis elegans
GN=gos-28 PE=2 SV=1
Length = 234
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 116/233 (49%), Gaps = 20/233 (8%)
Query: 6 SWDALRKQARKLEAQLDEQMHSYRKLV-SSKGSTKVD--------AAENDLESGIDWLLK 56
+W+ALRK+AR E +D ++ S KL SS G +D + + + I+ L++
Sbjct: 4 TWEALRKKARSTENSIDVKLVSLNKLTASSHGGFDIDEKTVSSRQTSFKTVTTEIEGLIE 63
Query: 57 QLQQVNIQMQDWVSS------GGSEMVSHTLTRHQEILQDLTQEFYRLRSSLKAKQEHAS 110
QL +N M D + + + HTL RH+EIL+D E+ R R ++ +
Sbjct: 64 QLTNINDDMNDVAGAQSSASWANNPAIQHTLRRHREILRDYGSEYRRARDNVDQVLQREL 123
Query: 111 LLEDFREFDRTRLDLEDGVGSPEQALLKEHASINRSTGQMDSVISQAQATLGALVFQRST 170
LL E +R L + + LKE+ IN +D + A +T + Q
Sbjct: 124 LLSSSNE-NRNNPILNNRARGYDM-YLKENDHINACDRLLDEQLEMAMSTKENMARQGIN 181
Query: 171 FGGINSKLSNVSSRLPSVNQILSSIKRKKSMDTIILALVASVCTFLIF-IYWV 222
GI+++L ++S + P++N ++ IK KK +T+ILA V S C LIF I+W+
Sbjct: 182 LRGISTRLHHISKKYPAINNLMQKIKTKKQKNTLILAAVISSC--LIFTIFWI 232
>sp|Q9VE50|GOSR1_DROME Golgi SNAP receptor complex member 1 OS=Drosophila melanogaster
GN=Gos28 PE=2 SV=1
Length = 232
Score = 90.5 bits (223), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 115/236 (48%), Gaps = 30/236 (12%)
Query: 5 SSWDALRKQARKLEAQLDEQMHSYRKL------VSSKGSTKVDAAE-------NDLESGI 51
SS+D LRKQAR LE ++D ++ ++ K+ S G VD + + L I
Sbjct: 4 SSYDVLRKQARSLENEIDLKLVAFSKIGAGSGGGGSGGLGGVDTSPLLGEHVFDSLSEEI 63
Query: 52 DWLLKQLQQVNIQMQDWVSSGGSEMVSHTLTRHQEILQDLTQEFYRLRSSLKAKQEHASL 111
+ +L++L +N M D +SG + M HTL RH+EILQ QEF ++ ++ + E L
Sbjct: 64 EQMLEKLSSLNESMSDLPASGAAAM--HTLQRHREILQGYRQEFNKICANHTMRIEREEL 121
Query: 112 LEDFREFDRTRLDLEDGVGSP-------EQALLKEHASINRSTGQMDSVISQAQATLGAL 164
L L GSP + LKE +N ++ ++ I+ A T L
Sbjct: 122 LRGS--------GLATSSGSPSISGLNRREMYLKESGHLNSASHLVNDQINIAIETRDHL 173
Query: 165 VFQRSTFGGINSKLSNVSSRLPSVNQILSSIKRKKSMDTIILALVASVCTFLIFIY 220
QR F + ++ +++S+R P ++ ++ I KK D++IL V C L+ +Y
Sbjct: 174 HAQRQAFKRLQTRFNDISNRFPLISSLIQRINIKKRRDSLILGAVIGFCVILLLLY 229
>sp|A8XLW0|GOSR1_CAEBR Golgi SNAP receptor complex member 1 OS=Caenorhabditis briggsae
GN=gos-28 PE=3 SV=1
Length = 234
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 113/236 (47%), Gaps = 26/236 (11%)
Query: 6 SWDALRKQARKLEAQLDEQMHSYRKLV-SSKGSTKVDAAE--------NDLESGIDWLLK 56
+W+ALRK+AR E +D ++ S KL SS G +D + + I+ L++
Sbjct: 4 TWEALRKKARSTENSIDVKLVSLNKLTASSHGGFDIDEKTVSSRQTTFRTVTTEIEGLIE 63
Query: 57 QLQQVNIQMQD---------WVSSGGSEMVSHTLTRHQEILQDLTQEFYRLRSSLKAKQE 107
QL +N M D W S+ + HTL RH+EIL+D E+ R R ++ +
Sbjct: 64 QLTNINDDMNDVAGAQSSASWASNPA---IQHTLRRHREILRDYGSEYRRARDNVDQVLQ 120
Query: 108 HASLLEDFREFDRTRLDLEDGVGSPEQALLKEHASINRSTGQMDSVISQAQATLGALVFQ 167
LL + +R + LKE+ IN +D I A +T + Q
Sbjct: 121 RELLLSSSN--NESRNPAVNNRARGYDMYLKENDHINACDRLLDEQIEMAMSTKENVARQ 178
Query: 168 RSTFGGINSKLSNVSSRLPSVNQILSSIKRKKSMDTIILALVASVCTFLIF-IYWV 222
GI+++L ++ + P++N ++ IK KK +T+ILA V S C LIF I+W+
Sbjct: 179 GINLRGISNRLHYITKKYPAINNLMQKIKTKKQKNTMILAGVISAC--LIFTIFWI 232
>sp|P38736|GOSR1_YEAST Golgi SNAP receptor complex member 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=GOS1 PE=1 SV=1
Length = 223
Score = 73.6 bits (179), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 102/224 (45%), Gaps = 4/224 (1%)
Query: 1 MDVPSSWDALRKQARKLEAQLDEQMHSYRKLVSSKGSTKVDAAENDLESGIDWLLKQLQQ 60
M S+ +R +A LE Q + + Y + S + E ++ ++ +L Q Q
Sbjct: 1 MSSQPSFVTIRGKAISLETQTESLLSKYSTFAQTTSSEQT-GQEKKIDKQLEGILGQRQD 59
Query: 61 VNIQMQDWVSSGGSEMVSH--TLTRHQEILQDLTQEFYRLRSSLKAKQEHASLLEDFR-E 117
V + S + S L RH+EILQD + F +RSS++ ++ +LL + +
Sbjct: 60 VIDSLTQICDSNPAISASKLSQLHRHKEILQDHWKSFRNIRSSIQQERNRLNLLFSVKND 119
Query: 118 FDRTRLDLEDGVGSPEQALLKEHASINRSTGQMDSVISQAQATLGALVFQRSTFGGINSK 177
+ D +G ++ + E I++S +D +ISQA T Q + N+K
Sbjct: 120 IANSTTDAPAPIGDADEYIQNETRRIDQSNNVVDRLISQAWETRSQFHSQSNVLNTANNK 179
Query: 178 LSNVSSRLPSVNQILSSIKRKKSMDTIILALVASVCTFLIFIYW 221
+ R+P VNQ++ I ++ + +LA + ++C +F W
Sbjct: 180 VLQTLQRIPGVNQLIMKINTRRKKNAFVLATITTLCILFLFFTW 223
>sp|Q09835|GOS1_SCHPO Protein transport protein gos1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=gos1 PE=3 SV=1
Length = 182
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 62/109 (56%), Gaps = 12/109 (11%)
Query: 122 RLDLEDGVGSPEQAL-------LKEHASINRSTGQMDSVISQAQATLGALVFQRSTFGGI 174
+ D + V SPE+ ++E S++ S + ++ +A AT +Q S G +
Sbjct: 76 KYDAKQEVLSPEELRDAQNFLEMQEANSLDNSIRGTNELLERAYATREDFDYQNSVLGNV 135
Query: 175 NSKLSNVSSRLPSVNQIL--SSIKRKKSMDTIILALVASVCTFLIFIYW 221
++++ + +P +NQIL +SI+R++ D+IILAL+ SV L+F+++
Sbjct: 136 TNRINGAAMSIPFINQILRKTSIRRRR--DSIILALLISVL-MLLFLFF 181
>sp|Q9P7G5|BOS1_SCHPO Protein transport protein bos1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=bos1 PE=3 SV=1
Length = 235
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 131 SPEQALLKEHASINRSTGQMDSVISQAQATLGALVFQRSTFGGINSKLSNVSSRLPSVNQ 190
S + LLKEH + R+ Q+D + + + LG LV Q S +K+ N ++ L
Sbjct: 141 SRQDGLLKEHDFLGRAESQVDEFLERGRMILGDLVEQGSVLKATKTKVLNAANTLGITRH 200
Query: 191 ILSSIKRKKSMDTIILALVASVCTFLIFIYW 221
LS I R+ D II A FL+F+ +
Sbjct: 201 TLSLINRRSKQDKIIFYCGA----FLVFVLF 227
>sp|Q6BZQ6|BOS1_YARLI Protein transport protein BOS1 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=BOS1 PE=3 SV=1
Length = 226
Score = 37.4 bits (85), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 13/155 (8%)
Query: 81 LTRHQEILQDLTQEFYRLRSSLKAK--QEHASLLEDFREF--DRTRLDLEDGVGSP---- 132
L R +E L D EF LRS+ + K +E+ + L + R R D P
Sbjct: 71 LARFREELADARSEFKNLRSAREEKTLEENKTALFGDNPYGESRNRNVNRDVPIQPTYTD 130
Query: 133 ---EQALLKEHASINRSTGQMDSVISQAQATLGALVFQRSTFGGINSKLSNVSSRLPSVN 189
E+ + +E +S+N+ Q+DS I Q A LG L Q K+ +V+ L
Sbjct: 131 LTREEGMQREQSSLNQVGQQLDSFIEQGMAALGDLQEQSDILRSTGKKMRSVAETLGLSR 190
Query: 190 QILSSIKRKKSMDTIILALVASVCTFLIFIYWVTK 224
+ + ++++ D + L+ Y++ K
Sbjct: 191 ETIKMVEKRARQDKRF--FYGGIVFMLVCFYYILK 223
>sp|P41941|GOSR2_CAEEL Probable Golgi SNAP receptor complex member 2 OS=Caenorhabditis
elegans GN=gosr-2.1 PE=3 SV=1
Length = 213
Score = 37.4 bits (85), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 32/76 (42%)
Query: 146 STGQMDSVISQAQATLGALVFQRSTFGGINSKLSNVSSRLPSVNQILSSIKRKKSMDTII 205
S +D +ISQ A L L Q G+ K+ + L N L I R+ D I+
Sbjct: 133 SHTHLDDLISQGSAVLENLKSQHLNLRGVGRKMHEIGQALGLSNSTLQVIDRRVREDWIL 192
Query: 206 LALVASVCTFLIFIYW 221
+ VC ++ ++
Sbjct: 193 FVIGCIVCCIFMYAFY 208
>sp|Q9UPN3|MACF1_HUMAN Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 OS=Homo
sapiens GN=MACF1 PE=1 SV=4
Length = 7388
Score = 35.0 bits (79), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 14/94 (14%)
Query: 42 AAENDLESGIDWLLKQLQQVNIQMQD----------WVSSGGSEMVSHTLTRHQEILQDL 91
A+ N + I +Q+Q++N++M+D V+ S + L +HQ+ +Q+L
Sbjct: 4245 ASGNQPDQDITHFFQQIQELNLEMEDQQENLDTLEHLVTELSSCGFALDLCQHQDRVQNL 4304
Query: 92 TQEFYRLRSSLKAKQEHAS----LLEDFREFDRT 121
++F L+ ++K +++ AS L++FR+ RT
Sbjct: 4305 RKDFTELQKTVKEREKDASSCQEQLDEFRKLVRT 4338
>sp|Q57675|VATI_METJA V-type ATP synthase subunit I OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=atpI PE=3 SV=1
Length = 695
Score = 32.7 bits (73), Expect = 1.8, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 101 SLKAKQEHASLLEDFREFDRTRLDLEDGVGSPEQALLKEHASINRSTGQMDSVISQAQA 159
+LK K E ++L + R+F+ R D+ D G+P +AL K + + + +S+I + +A
Sbjct: 217 TLKEKLE--NVLSEIRKFEFERYDISDVEGTPSEALSKIESELKAIESERNSLIEKLKA 273
>sp|P02469|LAMB1_MOUSE Laminin subunit beta-1 OS=Mus musculus GN=Lamb1 PE=1 SV=3
Length = 1786
Score = 32.7 bits (73), Expect = 2.0, Method: Composition-based stats.
Identities = 41/212 (19%), Positives = 90/212 (42%), Gaps = 20/212 (9%)
Query: 8 DALRKQARKLEAQLDEQMHSYRKLVSSKGSTK--VDAAENDLESGIDWLLKQLQQVNIQM 65
+ L K + + + DE + + ++ +TK VD + DL + I + L + + +
Sbjct: 1459 EQLSKMVSEAKVRADEAKQNAQDVLLKTNATKEKVDKSNEDLRNLIKQIRNFLTEDSADL 1518
Query: 66 QDWVSSGGSEMVSHTLTRHQEILQDLTQEFYRLRSSLKAK----QEHAS-------LLED 114
D + + +E++ + + LQ+LT++ +L Q+ A+ LLE+
Sbjct: 1519 -DSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVETLSQVEVILQQSAADIARAELLLEE 1577
Query: 115 FREFDRTRLDLE---DGVGSPEQALLKEHASINRSTGQMDSVISQAQATLGALVFQRSTF 171
+ ++ D++ D V + K + ++ Q D I Q L ++ S
Sbjct: 1578 AKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADEDIQGTQNLLTSI---ESET 1634
Query: 172 GGINSKLSNVSSRLPSVNQILSSIKRKKSMDT 203
L+N S R+ + + + +KRK + ++
Sbjct: 1635 AASEETLTNASQRISKLERNVEELKRKAAQNS 1666
>sp|P25385|BOS1_YEAST Protein transport protein BOS1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=BOS1 PE=1 SV=1
Length = 244
Score = 32.7 bits (73), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Query: 127 DGVGSP-EQALLKEHASINRSTGQMDSVISQAQATLGALVFQRSTFGGINSKLSNVSSRL 185
+G G P Q L KE + R Q+D ++ Q + +V Q + ++SN L
Sbjct: 145 NGGGLPLYQGLQKEQSVFERGNAQLDYILEMGQQSFENIVEQNKILSKVQDRMSNGLRTL 204
Query: 186 PSVNQILSSIKRKKSMDTIIL 206
Q ++SI ++ D ++
Sbjct: 205 GVSEQTITSINKRVFKDKLVF 225
>sp|O54761|ALMS_SPETR Alpha-1-antitrypsin-like protein GS55-MS OS=Spermophilus
tridecemlineatus PE=2 SV=1
Length = 413
Score = 32.3 bits (72), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 27 SYRKLVSSKGSTKVDAAENDLESGIDWLLKQLQQVNIQMQDWVSSGGSEMVSHTLTRHQE 86
++ +++ G + AE+D+ G LL+ L + N Q+Q +++G + H L +
Sbjct: 91 THTQIMEGLGFNLTETAESDIHQGFQHLLQTLNKPNSQLQ--LTTGNGLFIDHNLKLLDK 148
Query: 87 ILQDLTQEFY 96
LQD+ ++
Sbjct: 149 FLQDVKNLYH 158
>sp|Q5SNZ0|GRDN_MOUSE Girdin OS=Mus musculus GN=Ccdc88a PE=1 SV=2
Length = 1873
Score = 31.6 bits (70), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Query: 2 DVPSSWDALRKQARKLEAQLDEQMHSYRKLVSSKGSTK-----VDAAENDLESGIDWLLK 56
D+ S +DAL K KLE + Q Y L+S G+ K ++ DLE + LLK
Sbjct: 1148 DLKSLYDALIKDHEKLELLHERQASEYESLISKHGTLKSAHKNLEVEHKDLEDRYNQLLK 1207
Query: 57 QLQQV 61
Q Q+
Sbjct: 1208 QKGQL 1212
>sp|P10587|MYH11_CHICK Myosin-11 OS=Gallus gallus GN=MYH11 PE=1 SV=4
Length = 1979
Score = 31.2 bits (69), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 74/176 (42%), Gaps = 31/176 (17%)
Query: 46 DLESGID-------WLLKQLQQVNIQMQDWV-----SSGGSEMVSHTLTRHQEILQDLTQ 93
DLES +D +KQL+++ QM+D+ + E + T +++ ++L
Sbjct: 1634 DLESQVDSANKAREEAIKQLRKLQAQMKDYQRDLDDARAAREEIFATARENEKKAKNLEA 1693
Query: 94 EFYRLRSSLKAKQ--------EHASLLEDFREFDRTRLDLEDG-------VGSPEQALLK 138
E +L+ L A + E + E+ + R L+D + E+ L +
Sbjct: 1694 ELIQLQEDLAAAERARKQADLEKEEMAEELASANSGRTSLQDEKRRLEARIAQLEEELDE 1753
Query: 139 EHASINRSTGQMDSVISQAQATLGALVFQRSTFGGINSKLSNVSSRLPSVNQILSS 194
EH++I + +M + QA+ L +R+T K N +L N+ L S
Sbjct: 1754 EHSNIETMSDRMRKAVQQAEQLNNELATERATA----QKNENARQQLERQNKELRS 1805
>sp|Q00547|HMMR_MOUSE Hyaluronan mediated motility receptor OS=Mus musculus GN=Hmmr PE=1
SV=4
Length = 794
Score = 31.2 bits (69), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 32/60 (53%)
Query: 135 ALLKEHASINRSTGQMDSVISQAQATLGALVFQRSTFGGINSKLSNVSSRLPSVNQILSS 194
ALL+E + ++ M+S + + +A L A V ++++ N+ L + L N++L +
Sbjct: 94 ALLQERGTQDKRIQDMESELEKTEAKLNAAVREKTSLSASNASLEKRLTELTRANELLKA 153
>sp|P30622|CLIP1_HUMAN CAP-Gly domain-containing linker protein 1 OS=Homo sapiens GN=CLIP1
PE=1 SV=2
Length = 1438
Score = 31.2 bits (69), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 77 VSHTLTRHQEILQDLTQEFYRLRSSLK-AKQEHASLLEDFREFDRTRLDLEDGVGSPEQA 135
S T T+H+EILQ+L + LK A++E++ LL++ E R + D + E A
Sbjct: 1033 TSETKTKHEEILQNLQKTLLDTEDKLKGAREENSGLLQELEEL-RKQADKAKAAQTAEDA 1091
Query: 136 L 136
+
Sbjct: 1092 M 1092
>sp|Q922J3|CLIP1_MOUSE CAP-Gly domain-containing linker protein 1 OS=Mus musculus GN=Clip1
PE=1 SV=1
Length = 1391
Score = 30.8 bits (68), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 78 SHTLTRHQEILQDLTQEFYRLRSSLKAKQE-HASLLEDFREFDRTRLDLEDGVGSPEQAL 136
S T T+H+EILQ+L + LKA QE + L++D E +T+ D + E A+
Sbjct: 987 SETKTKHEEILQNLQKMLADTEDKLKAAQEANRDLMQDMEEL-KTQADKAKAAQTAEDAM 1045
>sp|Q5GM68|CAPP2_ARATH Phosphoenolpyruvate carboxylase 2 OS=Arabidopsis thaliana GN=PPC2
PE=1 SV=2
Length = 963
Score = 30.4 bits (67), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 19 AQLDEQMH-SYRKLVSS-KGSTKVDAAENDLESGIDWLLKQLQQVNIQMQDWVSSGGSEM 76
A L E++ +YR+ + K D A ES I+ LK+L Q+N ++ + ++
Sbjct: 105 ANLAEEVQIAYRRRIKKLKKGDFADEASATTESDIEETLKRLLQLNKTPEEVFDALKNQT 164
Query: 77 VSHTLTRH--QEILQDLTQEFYRLRSSL 102
V LT H Q + + L Q+F R+R L
Sbjct: 165 VDLVLTAHPTQSVRRSLLQKFGRIRDCL 192
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.128 0.352
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,354,173
Number of Sequences: 539616
Number of extensions: 2548591
Number of successful extensions: 10653
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 166
Number of HSP's that attempted gapping in prelim test: 10499
Number of HSP's gapped (non-prelim): 309
length of query: 224
length of database: 191,569,459
effective HSP length: 113
effective length of query: 111
effective length of database: 130,592,851
effective search space: 14495806461
effective search space used: 14495806461
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)