BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027390
(224 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|15217492|ref|NP_174599.1| putative stage III sporulation protein AA [Arabidopsis thaliana]
gi|12322578|gb|AAG51292.1|AC027035_15 unknown protein [Arabidopsis thaliana]
gi|48596989|gb|AAT46035.1| At1g33290 [Arabidopsis thaliana]
gi|50198961|gb|AAT70483.1| At1g33290 [Arabidopsis thaliana]
gi|332193460|gb|AEE31581.1| putative stage III sporulation protein AA [Arabidopsis thaliana]
Length = 379
Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust.
Identities = 191/224 (85%), Positives = 210/224 (93%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+YDLLHYGKSILFVGRPGVGKTTV+REIARVLSDEFQKRVVI+DTSNEIGGDGDIPHSA
Sbjct: 156 MLYDLLHYGKSILFVGRPGVGKTTVLREIARVLSDEFQKRVVIIDTSNEIGGDGDIPHSA 215
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG +RRMQVP+PSLQHKVMIEAVENHMP+VIIVDEIGTEAEA ACRSIAERGVMLIGTAH
Sbjct: 216 IGGSRRMQVPKPSLQHKVMIEAVENHMPQVIIVDEIGTEAEALACRSIAERGVMLIGTAH 275
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
GE L+NIIKNP LSDLIGG++TVTLGDEEARARR QKSILERKAPPTFYFLIEMRER YW
Sbjct: 276 GEQLQNIIKNPTLSDLIGGIETVTLGDEEARARRSQKSILERKAPPTFYFLIEMRERDYW 335
Query: 181 VTHKTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTYDRHDI 224
+ H+TEKSVDMLLRG+ P+VE+R+RD+ + VV++RWK YD I
Sbjct: 336 IAHQTEKSVDMLLRGRNPMVEVRRRDEEYKVVIERWKAYDGQGI 379
>gi|297846316|ref|XP_002891039.1| hypothetical protein ARALYDRAFT_473506 [Arabidopsis lyrata subsp.
lyrata]
gi|297336881|gb|EFH67298.1| hypothetical protein ARALYDRAFT_473506 [Arabidopsis lyrata subsp.
lyrata]
Length = 379
Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust.
Identities = 191/224 (85%), Positives = 210/224 (93%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+YDLLHYGKSILFVGRPGVGKTTV+REIARVLSDEFQKRVVI+DTSNEIGGDGDIPHSA
Sbjct: 156 MLYDLLHYGKSILFVGRPGVGKTTVLREIARVLSDEFQKRVVIIDTSNEIGGDGDIPHSA 215
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG +RRMQVP+PSLQHKVMIEAVENHMP+VIIVDEIGTEAEA ACRSIAERGVMLIGTAH
Sbjct: 216 IGGSRRMQVPKPSLQHKVMIEAVENHMPQVIIVDEIGTEAEALACRSIAERGVMLIGTAH 275
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
GE L+NIIKNP LSDLIGG++TVTLGDEEARARR QKSILERKAPPTFYFLIEMRER YW
Sbjct: 276 GEQLQNIIKNPTLSDLIGGIETVTLGDEEARARRTQKSILERKAPPTFYFLIEMRERDYW 335
Query: 181 VTHKTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTYDRHDI 224
+ H+TEKSVDMLLRG+ P+VE+R+RD+ + VV++RWK YD I
Sbjct: 336 IAHQTEKSVDMLLRGRNPMVEVRRRDEEYKVVIERWKAYDGQGI 379
>gi|222423588|dbj|BAH19763.1| AT1G33290 [Arabidopsis thaliana]
Length = 379
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 190/224 (84%), Positives = 209/224 (93%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+YDLLHYGKSILFVGRPGVGKTTV+REIARVLSDEFQKRVVI+DTSNEI GDGDIPHSA
Sbjct: 156 MLYDLLHYGKSILFVGRPGVGKTTVLREIARVLSDEFQKRVVIIDTSNEIEGDGDIPHSA 215
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG +RRMQVP+PSLQHKVMIEAVENHMP+VIIVDEIGTEAEA ACRSIAERGVMLIGTAH
Sbjct: 216 IGGSRRMQVPKPSLQHKVMIEAVENHMPQVIIVDEIGTEAEALACRSIAERGVMLIGTAH 275
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
GE L+NIIKNP LSDLIGG++TVTLGDEEARARR QKSILERKAPPTFYFLIEMRER YW
Sbjct: 276 GEQLQNIIKNPTLSDLIGGIETVTLGDEEARARRSQKSILERKAPPTFYFLIEMRERDYW 335
Query: 181 VTHKTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTYDRHDI 224
+ H+TEKSVDMLLRG+ P+VE+R+RD+ + VV++RWK YD I
Sbjct: 336 IAHQTEKSVDMLLRGRNPMVEVRRRDEEYKVVIERWKAYDGQGI 379
>gi|357160507|ref|XP_003578787.1| PREDICTED: uncharacterized protein ycf45-like [Brachypodium
distachyon]
Length = 388
Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust.
Identities = 190/220 (86%), Positives = 207/220 (94%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
MV DLL+Y +SILF+GRPGVGKTTVMREIARVL+DEFQKRVVIVDTSNEIGGDGDIPH+A
Sbjct: 165 MVRDLLNYKESILFLGRPGVGKTTVMREIARVLADEFQKRVVIVDTSNEIGGDGDIPHAA 224
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVPEPS+QH+VMIEAVENHMPEV+IVDEIGTEAEA ACRSIAERGVMLIGTAH
Sbjct: 225 IGGARRMQVPEPSMQHRVMIEAVENHMPEVVIVDEIGTEAEAQACRSIAERGVMLIGTAH 284
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
GE L NIIKNP+LSDLIGGV+TVTLGDEEARARR QKSILERKAPPTF FLIEMRERHYW
Sbjct: 285 GERLANIIKNPVLSDLIGGVETVTLGDEEARARRTQKSILERKAPPTFPFLIEMRERHYW 344
Query: 181 VTHKTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTYD 220
VTH+TE+SVDMLL GK PLVE+RKRD+ F V+++RW TYD
Sbjct: 345 VTHRTERSVDMLLHGKKPLVEVRKRDNEFQVIIERWATYD 384
>gi|326506502|dbj|BAJ86569.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 387
Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/220 (85%), Positives = 207/220 (94%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
MV DLL+Y +SILF+GRPGVGKTTVMREIARVL+DEFQKRVVIVDTSNEIGGDGDIPH+A
Sbjct: 164 MVRDLLNYKESILFLGRPGVGKTTVMREIARVLADEFQKRVVIVDTSNEIGGDGDIPHAA 223
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVPEPS+QH+VMIEAVENHMPEV+IVDEIGTE+EA ACRSIAERGVMLIGTAH
Sbjct: 224 IGGARRMQVPEPSMQHRVMIEAVENHMPEVVIVDEIGTESEAQACRSIAERGVMLIGTAH 283
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
GE L NIIKNP+LSDL+GGV+TVTLGDEEARARR QKSILERKAPPTF FLIEMRERHYW
Sbjct: 284 GERLANIIKNPVLSDLVGGVETVTLGDEEARARRTQKSILERKAPPTFPFLIEMRERHYW 343
Query: 181 VTHKTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTYD 220
VTH+TE+SVDMLL GK PLVE+RKRD+ F V+++RW TYD
Sbjct: 344 VTHRTERSVDMLLHGKKPLVEVRKRDNEFQVIIERWATYD 383
>gi|255557835|ref|XP_002519947.1| Stage III sporulation protein AA, putative [Ricinus communis]
gi|223540993|gb|EEF42551.1| Stage III sporulation protein AA, putative [Ricinus communis]
Length = 412
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/220 (85%), Positives = 206/220 (93%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
MV+DLLHYGKSILFVGRPGVGKTTVMREIARVLSD+ KRVV+VDTSNEIGGDGDIPH+A
Sbjct: 189 MVHDLLHYGKSILFVGRPGVGKTTVMREIARVLSDKLDKRVVVVDTSNEIGGDGDIPHAA 248
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
+G ARRMQVP+PSLQHKVMIEAVENHMPEVIIVDEIGTEAEA ACRSIAERG+MLIGTAH
Sbjct: 249 VGGARRMQVPDPSLQHKVMIEAVENHMPEVIIVDEIGTEAEALACRSIAERGIMLIGTAH 308
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
GE LENIIKNP LS+LIGG++TV LGDEEARARR QKSILERK PPTFYFLIEMRERH+W
Sbjct: 309 GERLENIIKNPTLSNLIGGIETVILGDEEARARRSQKSILERKGPPTFYFLIEMRERHHW 368
Query: 181 VTHKTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTYD 220
VTH TEKSVDMLLRG+ P VE+R+R+D+F VV++RWK YD
Sbjct: 369 VTHLTEKSVDMLLRGENPSVEVRRRNDQFKVVIERWKAYD 408
>gi|77553351|gb|ABA96147.1| expressed protein [Oryza sativa Japonica Group]
Length = 395
Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust.
Identities = 189/220 (85%), Positives = 206/220 (93%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
MV DLL+Y +SILF+GRPGVGKTTVMREIARVL+DEFQKRVVIVDTSNEIGGDGDIPH+A
Sbjct: 172 MVRDLLNYKESILFLGRPGVGKTTVMREIARVLADEFQKRVVIVDTSNEIGGDGDIPHAA 231
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV +PS+QH+VMIEAVENHMPEV+IVDEIGTEAEA ACRSIAERGVMLIGTAH
Sbjct: 232 IGGARRMQVAQPSMQHRVMIEAVENHMPEVVIVDEIGTEAEAQACRSIAERGVMLIGTAH 291
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
GE L NIIKNP LSDLIGGV+TVTLGDEEARARR QKSILERKAPPTF FLIEMRERHYW
Sbjct: 292 GEHLANIIKNPTLSDLIGGVETVTLGDEEARARRSQKSILERKAPPTFPFLIEMRERHYW 351
Query: 181 VTHKTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTYD 220
VTH+TE+SVDMLL GK PLVE+RKRD++F VV++RW TYD
Sbjct: 352 VTHRTERSVDMLLHGKKPLVEVRKRDNKFQVVIERWATYD 391
>gi|226531438|ref|NP_001144701.1| uncharacterized protein LOC100277737 [Zea mays]
gi|195645988|gb|ACG42462.1| hypothetical protein [Zea mays]
gi|414865048|tpg|DAA43605.1| TPA: hypothetical protein ZEAMMB73_327805 [Zea mays]
Length = 390
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/220 (85%), Positives = 205/220 (93%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
MV DLL+Y +SILF+GRPGVGKTTVMREIARVL+DEFQKRVVIVDTSNEIGGDGD+PH+A
Sbjct: 167 MVRDLLNYKESILFLGRPGVGKTTVMREIARVLADEFQKRVVIVDTSNEIGGDGDVPHAA 226
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVPEPS+QH+VMIEAVENHMPEV+IVDEIGTEAEA ACRSIAERGVMLIGTAH
Sbjct: 227 IGGARRMQVPEPSMQHRVMIEAVENHMPEVVIVDEIGTEAEAQACRSIAERGVMLIGTAH 286
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
GE L NIIKNP LSDLIGGV+TVTLGD+EARARR QKSILERKAPPTF FLIEMRERHYW
Sbjct: 287 GERLANIIKNPTLSDLIGGVETVTLGDDEARARRSQKSILERKAPPTFPFLIEMRERHYW 346
Query: 181 VTHKTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTYD 220
VTH+TE+SVDMLL GK PLVE+RKRD F VV++RW TYD
Sbjct: 347 VTHRTERSVDMLLHGKKPLVEVRKRDSEFQVVIERWATYD 386
>gi|218186582|gb|EEC69009.1| hypothetical protein OsI_37798 [Oryza sativa Indica Group]
Length = 484
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/218 (85%), Positives = 204/218 (93%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
MV DLL+Y +SILF+GRPGVGKTTVMREIARVL+DEFQKRVVIVDTSNEIGGDGDIPH+A
Sbjct: 184 MVRDLLNYKESILFLGRPGVGKTTVMREIARVLADEFQKRVVIVDTSNEIGGDGDIPHAA 243
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV +PS+QH+VMIEAVENHMPEV+IVDEIGTEAEA ACRSIAERGVMLIGTAH
Sbjct: 244 IGGARRMQVAQPSMQHRVMIEAVENHMPEVVIVDEIGTEAEAQACRSIAERGVMLIGTAH 303
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
GE L NIIKNP LSDLIGGV+TVTLGDEEARARR QKSILERKAPPTF FLIEMRERHYW
Sbjct: 304 GEHLANIIKNPTLSDLIGGVETVTLGDEEARARRSQKSILERKAPPTFPFLIEMRERHYW 363
Query: 181 VTHKTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKT 218
VTH+TE+SVDMLL GK PLVE+RKRD++F VV++RW T
Sbjct: 364 VTHRTERSVDMLLHGKKPLVEVRKRDNKFQVVIERWAT 401
>gi|222616800|gb|EEE52932.1| hypothetical protein OsJ_35561 [Oryza sativa Japonica Group]
Length = 451
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/218 (85%), Positives = 204/218 (93%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
MV DLL+Y +SILF+GRPGVGKTTVMREIARVL+DEFQKRVVIVDTSNEIGGDGDIPH+A
Sbjct: 151 MVRDLLNYKESILFLGRPGVGKTTVMREIARVLADEFQKRVVIVDTSNEIGGDGDIPHAA 210
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV +PS+QH+VMIEAVENHMPEV+IVDEIGTEAEA ACRSIAERGVMLIGTAH
Sbjct: 211 IGGARRMQVAQPSMQHRVMIEAVENHMPEVVIVDEIGTEAEAQACRSIAERGVMLIGTAH 270
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
GE L NIIKNP LSDLIGGV+TVTLGDEEARARR QKSILERKAPPTF FLIEMRERHYW
Sbjct: 271 GEHLANIIKNPTLSDLIGGVETVTLGDEEARARRSQKSILERKAPPTFPFLIEMRERHYW 330
Query: 181 VTHKTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKT 218
VTH+TE+SVDMLL GK PLVE+RKRD++F VV++RW T
Sbjct: 331 VTHRTERSVDMLLHGKKPLVEVRKRDNKFQVVIERWAT 368
>gi|357504105|ref|XP_003622341.1| F-box protein [Medicago truncatula]
gi|355497356|gb|AES78559.1| F-box protein [Medicago truncatula]
Length = 663
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 182/221 (82%), Positives = 208/221 (94%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
MVYDLLHYGKSILF+GRPGVGKTTVMREIARVLSDEF KRVVIVDTSNEIGGDG+IPH+A
Sbjct: 440 MVYDLLHYGKSILFLGRPGVGKTTVMREIARVLSDEFHKRVVIVDTSNEIGGDGNIPHAA 499
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV EPS+QH VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERG+MLIGTAH
Sbjct: 500 IGGARRMQVSEPSMQHSVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGIMLIGTAH 559
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G+ +EN++KNP LSDLIGG+++VTLGD EARAR+CQK+ILERKAPPTF FLIEMR+RHYW
Sbjct: 560 GQQIENVMKNPTLSDLIGGIESVTLGDYEARARKCQKTILERKAPPTFDFLIEMRDRHYW 619
Query: 181 VTHKTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTYDR 221
+TH+T+KSVD+LLRGKTP VE+RKRD++ VV+++ K YD+
Sbjct: 620 ITHQTDKSVDILLRGKTPQVEVRKRDEKCKVVIEKSKAYDQ 660
>gi|356576569|ref|XP_003556403.1| PREDICTED: uncharacterized protein ycf45-like [Glycine max]
Length = 393
Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/224 (81%), Positives = 206/224 (91%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
MVYDLL YGKSILFVGRPGVGKTTVMREIARVLSDE KRVVIVDTSNEIGGDG+IPH+A
Sbjct: 170 MVYDLLQYGKSILFVGRPGVGKTTVMREIARVLSDELHKRVVIVDTSNEIGGDGNIPHAA 229
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVPEPS+QH+VMIEAVENHMPEVI+VDEIGTEAEAHACRSIAERG+MLIGTAH
Sbjct: 230 IGGARRMQVPEPSMQHRVMIEAVENHMPEVIVVDEIGTEAEAHACRSIAERGIMLIGTAH 289
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G+ LENIIKNP LSDLIGG+++VTLGD EARAR QK+ILERKAPPTF FLIEMR+RHYW
Sbjct: 290 GQQLENIIKNPTLSDLIGGIESVTLGDAEARARNSQKTILERKAPPTFDFLIEMRDRHYW 349
Query: 181 VTHKTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTYDRHDI 224
+TH+T+KSVDMLLRG +P VE+RKRD++ VV+++ K YD+ I
Sbjct: 350 LTHQTDKSVDMLLRGISPQVEVRKRDEKCKVVIEKSKAYDKCQI 393
>gi|359493523|ref|XP_002264380.2| PREDICTED: uncharacterized protein ycf45-like [Vitis vinifera]
gi|147770825|emb|CAN76429.1| hypothetical protein VITISV_023566 [Vitis vinifera]
Length = 351
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/224 (82%), Positives = 205/224 (91%), Gaps = 1/224 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DLL +G+SILFVGRPGVGKTTVMREIARVLSDE +RVVIVDTSNEIGGDGDIPH+A
Sbjct: 129 MIRDLLPFGESILFVGRPGVGKTTVMREIARVLSDELNRRVVIVDTSNEIGGDGDIPHAA 188
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVPEPS+QH++MIEAVENHMPEVIIVDEIGTEAEA ACRSIAERG+MLIGTAH
Sbjct: 189 IGGARRMQVPEPSMQHRIMIEAVENHMPEVIIVDEIGTEAEALACRSIAERGIMLIGTAH 248
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
GE LENIIKNP LSDL+GG++TVTLGD EARARRCQKSILERKA PTF FLIEMRERHYW
Sbjct: 249 GERLENIIKNPTLSDLVGGIETVTLGDAEARARRCQKSILERKALPTFPFLIEMRERHYW 308
Query: 181 VTHKTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTYDRHDI 224
VTH T++SVDMLL GK PLVE+R+R+D+F VV++R TYD +I
Sbjct: 309 VTHWTQRSVDMLLHGKRPLVEVRRRNDQFEVVIERG-TYDGSEI 351
>gi|297734733|emb|CBI16967.3| unnamed protein product [Vitis vinifera]
Length = 388
Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/224 (82%), Positives = 205/224 (91%), Gaps = 1/224 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DLL +G+SILFVGRPGVGKTTVMREIARVLSDE +RVVIVDTSNEIGGDGDIPH+A
Sbjct: 166 MIRDLLPFGESILFVGRPGVGKTTVMREIARVLSDELNRRVVIVDTSNEIGGDGDIPHAA 225
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVPEPS+QH++MIEAVENHMPEVIIVDEIGTEAEA ACRSIAERG+MLIGTAH
Sbjct: 226 IGGARRMQVPEPSMQHRIMIEAVENHMPEVIIVDEIGTEAEALACRSIAERGIMLIGTAH 285
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
GE LENIIKNP LSDL+GG++TVTLGD EARARRCQKSILERKA PTF FLIEMRERHYW
Sbjct: 286 GERLENIIKNPTLSDLVGGIETVTLGDAEARARRCQKSILERKALPTFPFLIEMRERHYW 345
Query: 181 VTHKTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTYDRHDI 224
VTH T++SVDMLL GK PLVE+R+R+D+F VV++R TYD +I
Sbjct: 346 VTHWTQRSVDMLLHGKRPLVEVRRRNDQFEVVIER-GTYDGSEI 388
>gi|242083132|ref|XP_002441991.1| hypothetical protein SORBIDRAFT_08g006480 [Sorghum bicolor]
gi|241942684|gb|EES15829.1| hypothetical protein SORBIDRAFT_08g006480 [Sorghum bicolor]
Length = 372
Score = 365 bits (937), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 177/202 (87%), Positives = 192/202 (95%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
MV+DLL+Y +SILF+GRPGVGKTTVMREIARVL+DEFQKRVVIVDTSNEIGGDGD+PH+A
Sbjct: 167 MVHDLLNYKESILFLGRPGVGKTTVMREIARVLADEFQKRVVIVDTSNEIGGDGDVPHAA 226
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVPEPS+QH+VMIEAVENHMPEV+IVDEIGTEAEA ACRSIAERGVMLIGTAH
Sbjct: 227 IGGARRMQVPEPSMQHRVMIEAVENHMPEVVIVDEIGTEAEAQACRSIAERGVMLIGTAH 286
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
GE L NIIKNP LSDLIGGV+TVTLGD+EARARR QKSILERKAPPTF FLIEMRERHYW
Sbjct: 287 GERLANIIKNPTLSDLIGGVETVTLGDDEARARRSQKSILERKAPPTFPFLIEMRERHYW 346
Query: 181 VTHKTEKSVDMLLRGKTPLVEI 202
VTH+TE+SVDMLL GK PLVE+
Sbjct: 347 VTHRTERSVDMLLHGKKPLVEV 368
>gi|297612841|ref|NP_001066391.2| Os12g0209000 [Oryza sativa Japonica Group]
gi|255670139|dbj|BAF29410.2| Os12g0209000 [Oryza sativa Japonica Group]
Length = 402
Score = 363 bits (931), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 177/201 (88%), Positives = 189/201 (94%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
MV DLL+Y +SILF+GRPGVGKTTVMREIARVL+DEFQKRVVIVDTSNEIGGDGDIPH+A
Sbjct: 172 MVRDLLNYKESILFLGRPGVGKTTVMREIARVLADEFQKRVVIVDTSNEIGGDGDIPHAA 231
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV +PS+QH+VMIEAVENHMPEV+IVDEIGTEAEA ACRSIAERGVMLIGTAH
Sbjct: 232 IGGARRMQVAQPSMQHRVMIEAVENHMPEVVIVDEIGTEAEAQACRSIAERGVMLIGTAH 291
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
GE L NIIKNP LSDLIGGV+TVTLGDEEARARR QKSILERKAPPTF FLIEMRERHYW
Sbjct: 292 GEHLANIIKNPTLSDLIGGVETVTLGDEEARARRSQKSILERKAPPTFPFLIEMRERHYW 351
Query: 181 VTHKTEKSVDMLLRGKTPLVE 201
VTH+TE+SVDMLL GK PLVE
Sbjct: 352 VTHRTERSVDMLLHGKKPLVE 372
>gi|302789283|ref|XP_002976410.1| hypothetical protein SELMODRAFT_104906 [Selaginella moellendorffii]
gi|300156040|gb|EFJ22670.1| hypothetical protein SELMODRAFT_104906 [Selaginella moellendorffii]
Length = 403
Score = 345 bits (885), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 162/223 (72%), Positives = 198/223 (88%), Gaps = 1/223 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
MV DLL GKSILF+GRPGVGKTTV+REIARVL+D+ +KRVV+VDTSNEIGGDGD+PH A
Sbjct: 117 MVRDLLDCGKSILFLGRPGVGKTTVIREIARVLADDLRKRVVVVDTSNEIGGDGDVPHPA 176
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVP+PS+QH+VM+EAVENHMP+V+IVDEIGTEAEA ACR+IAERGVML+ TAH
Sbjct: 177 IGGARRMQVPDPSMQHRVMVEAVENHMPQVVIVDEIGTEAEALACRTIAERGVMLVATAH 236
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G+ LENIIKNP LSDL+GG+ TVTLGD+EARAR QK++LERKAPPTF LIEMRER +W
Sbjct: 237 GQTLENIIKNPTLSDLVGGIQTVTLGDDEARARGTQKTVLERKAPPTFSILIEMRERSHW 296
Query: 181 VTHKTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTYDRHD 223
+ H+++KSVD LL+GK P+VE+R RD+ F VV+++ + YD+ +
Sbjct: 297 IAHQSDKSVDNLLQGKQPVVEMRTRDENFRVVIEK-RLYDKEE 338
>gi|302811106|ref|XP_002987243.1| hypothetical protein SELMODRAFT_125482 [Selaginella moellendorffii]
gi|300145140|gb|EFJ11819.1| hypothetical protein SELMODRAFT_125482 [Selaginella moellendorffii]
Length = 403
Score = 344 bits (883), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 162/223 (72%), Positives = 198/223 (88%), Gaps = 1/223 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
MV DLL GKSILF+GRPGVGKTTV+REIARVL+D+ +KRVV+VDTSNEIGGDGD+PH A
Sbjct: 117 MVRDLLDCGKSILFLGRPGVGKTTVIREIARVLADDLRKRVVVVDTSNEIGGDGDVPHPA 176
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVP+PS+QH+VM+EAVENHMP+V+IVDEIGTEAEA ACR+IAERGVML+ TAH
Sbjct: 177 IGGARRMQVPDPSMQHRVMVEAVENHMPQVVIVDEIGTEAEALACRTIAERGVMLVATAH 236
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G+ LENIIKNP LSDL+GG+ TVTLGD+EARAR QK++LERKAPPTF LIEMRER +W
Sbjct: 237 GQTLENIIKNPTLSDLVGGIQTVTLGDDEARARGTQKTVLERKAPPTFSILIEMRERSHW 296
Query: 181 VTHKTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTYDRHD 223
+ H+++KSVD LL+GK P+VE+R RD+ F VV+++ + YD+ +
Sbjct: 297 IAHQSDKSVDNLLQGKQPVVEMRTRDENFRVVIEK-RLYDKEE 338
>gi|145347639|ref|XP_001418270.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578499|gb|ABO96563.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 335
Score = 327 bits (838), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 158/215 (73%), Positives = 183/215 (85%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ D+L G+S+LF+GRPGVGKTTV+RE+ARVLSDE +KRVVI+DTSNEIGGDGDIPH A
Sbjct: 121 MIRDILPSGESVLFLGRPGVGKTTVIREMARVLSDELKKRVVIIDTSNEIGGDGDIPHPA 180
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVP+PS+QH+VMIEAVENHMPEVIIVDEIGTEAEA ACR+IAERGV LIGTAH
Sbjct: 181 IGGARRMQVPDPSMQHRVMIEAVENHMPEVIIVDEIGTEAEALACRTIAERGVQLIGTAH 240
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G+ LEN+IKNP L+DL+GGV TVTLGD+EARAR CQKSILER+ PPTF LIEM ER+ W
Sbjct: 241 GQLLENLIKNPTLTDLVGGVQTVTLGDDEARARGCQKSILERQGPPTFPILIEMHERNMW 300
Query: 181 VTHKTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 215
V H +SVD +L G P+V++R RD V V R
Sbjct: 301 VAHNVAESVDEVLSGARPVVQLRTRDGEGEVTVHR 335
>gi|255072155|ref|XP_002499752.1| predicted protein [Micromonas sp. RCC299]
gi|226515014|gb|ACO61010.1| predicted protein [Micromonas sp. RCC299]
Length = 440
Score = 322 bits (826), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 156/218 (71%), Positives = 183/218 (83%), Gaps = 5/218 (2%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ D+L +SILF+GRPGVGKTTV+REIARVLSDE KRVVI+DTSNEIGGDGDIPH A
Sbjct: 105 MIEDMLTGNESILFLGRPGVGKTTVIREIARVLSDELGKRVVIIDTSNEIGGDGDIPHRA 164
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG+ARRMQVP+P+LQH++MIEAVENHMPEVIIVDEIGTE EA ACR+IAERGV L+GTAH
Sbjct: 165 IGSARRMQVPDPALQHQIMIEAVENHMPEVIIVDEIGTEEEAIACRTIAERGVQLVGTAH 224
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G+ LEN+IKNP L+DL+GGV +VTLGD+EARAR CQK+I+ER+APPTF LIEM ER W
Sbjct: 225 GQLLENLIKNPTLTDLVGGVQSVTLGDDEARARGCQKTIMERQAPPTFPILIEMHERSMW 284
Query: 181 VTHKTEKSVDMLLRGKTPLVEIRKRDD-----RFNVVV 213
V H E+SVD +L G P+V++R RD RFN V
Sbjct: 285 VAHNVEESVDEVLAGGRPMVQVRSRDQNTGQVRFNRTV 322
>gi|384251818|gb|EIE25295.1| hypothetical protein COCSUDRAFT_13766, partial [Coccomyxa
subellipsoidea C-169]
Length = 322
Score = 317 bits (811), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 150/202 (74%), Positives = 176/202 (87%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ D+L S+LF+GRPGVGKTTV+RE+AR+LSD+ +KRVVIVDTSNEIGGDGD+PH A
Sbjct: 105 MIRDILDVPNSVLFLGRPGVGKTTVIREMARILSDDLKKRVVIVDTSNEIGGDGDVPHPA 164
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVP+PS QHKVM+EAVENHMPE++IVDEIGTEAEA ACR+IAERGV LI TAH
Sbjct: 165 IGGARRMQVPDPSQQHKVMVEAVENHMPEIVIVDEIGTEAEALACRTIAERGVQLIATAH 224
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G+ LEN++KNP LSDL+GG+ +VTLGDEEARAR QKS+LERKAPPTF +IEMRER YW
Sbjct: 225 GQLLENLLKNPTLSDLVGGIQSVTLGDEEARARGTQKSVLERKAPPTFPLVIEMRERAYW 284
Query: 181 VTHKTEKSVDMLLRGKTPLVEI 202
VTH E SVD LL GK P+V++
Sbjct: 285 VTHWVEDSVDCLLHGKVPVVQV 306
>gi|303285736|ref|XP_003062158.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456569|gb|EEH53870.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 570
Score = 315 bits (808), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 155/220 (70%), Positives = 179/220 (81%), Gaps = 2/220 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DLL +S LF+GRPGVGKTTV+RE+ARVLSDE KRVVI+DTSNEIGGDGD+PH A
Sbjct: 194 MIQDLLGSSESCLFLGRPGVGKTTVIREMARVLSDELGKRVVIIDTSNEIGGDGDVPHPA 253
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVPEPS QHKVMIEAVENHMPEVIIVDEIGTEAEA ACR+IAERGV L+GTAH
Sbjct: 254 IGGARRMQVPEPSAQHKVMIEAVENHMPEVIIVDEIGTEAEALACRTIAERGVQLVGTAH 313
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G+ LEN+I+NP L DL+GG+ +VTLGD+EARAR CQK+I+ER P TF +IEM ER +W
Sbjct: 314 GQLLENLIQNPTLKDLVGGIQSVTLGDDEARARGCQKTIMERAGPATFPIVIEMHERSFW 373
Query: 181 VTHKTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTYD 220
V H E+SVD +L G P+V+ R R D VVV R YD
Sbjct: 374 VAHNVEESVDEILTGGRPMVQTRARKD-GEVVVHR-AVYD 411
>gi|170079165|ref|YP_001735803.1| ATPase like protein [Synechococcus sp. PCC 7002]
gi|169886834|gb|ACB00548.1| ATPase like protein [Synechococcus sp. PCC 7002]
Length = 591
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 149/214 (69%), Positives = 173/214 (80%), Gaps = 1/214 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ +L+ GKSIL +GRPGVGKTT +REIARVL+D+F KRVVI+DTSNEI GDGDIPHSA
Sbjct: 128 MIQELVESGKSILLLGRPGVGKTTALREIARVLADDFGKRVVIIDTSNEIAGDGDIPHSA 187
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQHKVMIEAVENHMPEVII+DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 188 IGRARRMQVATPELQHKVMIEAVENHMPEVIIIDEIGTELEAQAARTIAERGVQLVGTAH 247
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+IKNP LSDL+GG+ VTLGDEEAR RR QK++LERKAPPTF +EM ER W
Sbjct: 248 GNRIENLIKNPTLSDLVGGIQAVTLGDEEARKRRSQKTVLERKAPPTFDVAVEMLERQRW 307
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 213
V H ++D LLRG PL+E+R DD+ NV +
Sbjct: 308 VVHSDVSITIDTLLRGHQPLLEVRTVDDQGNVKI 341
>gi|412993135|emb|CCO16668.1| single-stranded nucleic acid binding R3H domain-containing protein
[Bathycoccus prasinos]
Length = 484
Score = 306 bits (783), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 151/215 (70%), Positives = 175/215 (81%), Gaps = 2/215 (0%)
Query: 1 MVYDLLH--YGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPH 58
M+ D+L+ G+S+LF+G+PGVGKTTV+REIARVLSD+ QKRVVI+DTSNEIGGDGDIPH
Sbjct: 145 MIADVLNRDNGESVLFLGKPGVGKTTVIREIARVLSDDLQKRVVIIDTSNEIGGDGDIPH 204
Query: 59 SAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGT 118
AIG+ARRMQVP PS QHKVMIEAVENH PE+IIVDEIGTE EA ACR+IAERGV LIGT
Sbjct: 205 PAIGSARRMQVPNPSEQHKVMIEAVENHTPEIIIVDEIGTEMEALACRTIAERGVQLIGT 264
Query: 119 AHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERH 178
AHG LEN+IKNP LSDL+GGV TVTLGD+EAR+R CQK+I ER AP TF ++EM R
Sbjct: 265 AHGRLLENLIKNPTLSDLVGGVTTVTLGDDEARSRGCQKTISERAAPATFPIVVEMHARS 324
Query: 179 YWVTHKTEKSVDMLLRGKTPLVEIRKRDDRFNVVV 213
WV H E SVD +L G P+V +R RD+ V V
Sbjct: 325 MWVEHDVEVSVDDILVGNRPVVNLRTRDEEKRVQV 359
>gi|427723001|ref|YP_007070278.1| single-stranded nucleic acid binding R3H domain-containing protein
[Leptolyngbya sp. PCC 7376]
gi|427354721|gb|AFY37444.1| single-stranded nucleic acid binding R3H domain-containing protein
[Leptolyngbya sp. PCC 7376]
Length = 594
Score = 301 bits (772), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 147/214 (68%), Positives = 171/214 (79%), Gaps = 1/214 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ +L+ GKSIL +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGD+PHSA
Sbjct: 129 MIQELVESGKSILLLGRPGVGKTTALREIARVLADDVGKRVVIIDTSNEIAGDGDVPHSA 188
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P QH+VMIEAVENHMPEVII+DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 189 IGRARRMQVASPEQQHRVMIEAVENHMPEVIIIDEIGTELEAQAARTIAERGVQLVGTAH 248
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+IKNP LSDL+GG+ VTLGDEEAR RR QK++LERKAPPTF +EM ER W
Sbjct: 249 GNRIENLIKNPTLSDLVGGIQAVTLGDEEARKRRSQKTVLERKAPPTFDVAVEMLERQKW 308
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 213
V H+ ++D LLRG PL+EIR DD NV V
Sbjct: 309 VVHEDVSITIDTLLRGHQPLLEIRTVDDEGNVKV 342
>gi|86605726|ref|YP_474489.1| R3H domain-containing protein [Synechococcus sp. JA-3-3Ab]
gi|86554268|gb|ABC99226.1| R3H domain protein [Synechococcus sp. JA-3-3Ab]
Length = 633
Score = 300 bits (768), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 143/216 (66%), Positives = 173/216 (80%), Gaps = 1/216 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ G+S+L +GRPGVGKTT +REIARVL+DE KRV+I+DTSNEI GDGD+PH
Sbjct: 145 MIRDLVEQGRSMLLLGRPGVGKTTALREIARVLADELHKRVIIIDTSNEIAGDGDVPHPG 204
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQHKVMIEAVENHMPEV+++DEIGTE EA A R+IAERGV L+ TAH
Sbjct: 205 IGRARRMQVASPELQHKVMIEAVENHMPEVVVIDEIGTELEALASRTIAERGVQLVATAH 264
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G ++N+IKNP LSDLIGG+ +VTLGDEEAR R CQKS+LERKAPPTF +EM ER W
Sbjct: 265 GNRIDNLIKNPTLSDLIGGIQSVTLGDEEARRRGCQKSVLERKAPPTFEIAVEMLERDRW 324
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 215
V H+ +VD LLR + PLV++R D+R VV++R
Sbjct: 325 VIHEDVAATVDRLLRNREPLVQLRSLDERGQVVIER 360
>gi|428768784|ref|YP_007160574.1| single-stranded nucleic acid binding R3H domain-containing protein
[Cyanobacterium aponinum PCC 10605]
gi|428683063|gb|AFZ52530.1| single-stranded nucleic acid binding R3H domain-containing protein
[Cyanobacterium aponinum PCC 10605]
Length = 582
Score = 299 bits (765), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 145/220 (65%), Positives = 176/220 (80%), Gaps = 1/220 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ +L+ G+SIL +GRPGVGKTT +REIARVL+DE +KRVVI+DTSNEI GDGD+PH A
Sbjct: 124 MIKELVESGQSILLLGRPGVGKTTALREIARVLADELEKRVVIIDTSNEIAGDGDVPHPA 183
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVII+DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 184 IGRARRMQVARPELQHQVMIEAVENHMPEVIIIDEIGTELEALAARTIAERGVQLVGTAH 243
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN+IKNP LSDLIGG+ +VTLGDEEAR R QK++LERKAPPTF +EM ER W
Sbjct: 244 GNHLENLIKNPTLSDLIGGIQSVTLGDEEARRRGSQKTVLERKAPPTFEIAVEMWERQKW 303
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTY 219
V H+ ++VD LLRGK P+ ++R+ +D V + R ++
Sbjct: 304 VVHEDVAQTVDYLLRGKQPIPQLRQVNDEGEVSITRDPSF 343
>gi|434386487|ref|YP_007097098.1| hypothetical protein Cha6605_2518 [Chamaesiphon minutus PCC 6605]
gi|428017477|gb|AFY93571.1| hypothetical protein Cha6605_2518 [Chamaesiphon minutus PCC 6605]
Length = 588
Score = 298 bits (764), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 146/216 (67%), Positives = 171/216 (79%), Gaps = 1/216 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ GKSIL +GRPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGDIPHSA
Sbjct: 124 MIRDLVETGKSILMLGRPGVGKTTALREIARVLADELGKRVVIIDTSNEIAGDGDIPHSA 183
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 184 IGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 243
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN++KNP LSDLIGG+ VTLGDEEAR R QK++LERKAPPTF +EM ERH W
Sbjct: 244 GNRLENLLKNPTLSDLIGGIQAVTLGDEEARRRSSQKTVLERKAPPTFEIAVEMHERHRW 303
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 215
V H + + VD LLRG+ P ++R ++ V + R
Sbjct: 304 VVHDSVSEMVDTLLRGRQPTTQVRTVNEAGKVSIVR 339
>gi|119512852|ref|ZP_01631918.1| Single-stranded nucleic acid binding R3H [Nodularia spumigena
CCY9414]
gi|119462480|gb|EAW43451.1| Single-stranded nucleic acid binding R3H [Nodularia spumigena
CCY9414]
Length = 578
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 144/216 (66%), Positives = 172/216 (79%), Gaps = 1/216 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ GKSIL +GRPGVGKTT +REIARVL+D+F KRVVI+DTSNEI GDGD+PH A
Sbjct: 115 MIRDLVETGKSILMLGRPGVGKTTALREIARVLADDFHKRVVIIDTSNEIAGDGDVPHPA 174
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV +P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 175 IGRARRMQVAQPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 234
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+IKNP LSDL+GG+ VTLGD+EAR R QK++LERKAPPTF +EM ER W
Sbjct: 235 GNQIENLIKNPTLSDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRW 294
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 215
V H++ +VD LLRG+ P + R DD+ V V R
Sbjct: 295 VIHESVADTVDTLLRGRQPSPQTRTVDDQGKVAVTR 330
>gi|411119520|ref|ZP_11391900.1| hypothetical protein OsccyDRAFT_3443 [Oscillatoriales
cyanobacterium JSC-12]
gi|410711383|gb|EKQ68890.1| hypothetical protein OsccyDRAFT_3443 [Oscillatoriales
cyanobacterium JSC-12]
Length = 661
Score = 296 bits (759), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 145/221 (65%), Positives = 173/221 (78%), Gaps = 1/221 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ GKSIL +GRPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGD+PH A
Sbjct: 165 MIRDLVESGKSILMLGRPGVGKTTALREIARVLADELDKRVVIIDTSNEIAGDGDVPHPA 224
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 225 IGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 284
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN+IKNP LSDL+GG+ +VTLGDEEAR R QKS+LERKAPPTF +EM ER W
Sbjct: 285 GNRLENLIKNPTLSDLVGGIQSVTLGDEEARRRGSQKSVLERKAPPTFDIAVEMLERQRW 344
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTYD 220
V H+ +++D LLRG+ P ++R +D VV+ + D
Sbjct: 345 VVHEHVAETIDSLLRGRQPNPQVRTINDVGKVVITHELSSD 385
>gi|22298282|ref|NP_681529.1| hypothetical protein tlr0740 [Thermosynechococcus elongatus BP-1]
gi|22294461|dbj|BAC08291.1| ycf45 [Thermosynechococcus elongatus BP-1]
Length = 567
Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 145/216 (67%), Positives = 171/216 (79%), Gaps = 1/216 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ G+SIL +GRPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGDIPH A
Sbjct: 123 MIRDLVESGQSILLLGRPGVGKTTALREIARVLADELHKRVVIIDTSNEIAGDGDIPHPA 182
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMP+VI++DEIGTE EA A R+IAERGV LIGTAH
Sbjct: 183 IGKARRMQVARPELQHQVMIEAVENHMPQVIVIDEIGTELEALAARTIAERGVQLIGTAH 242
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN++KNP L+DL+GG+ +VTLGDEEAR R QKS+LERKAPPTF +EM ER W
Sbjct: 243 GNQIENLMKNPTLADLVGGIQSVTLGDEEARRRGTQKSVLERKAPPTFQMAVEMLERDRW 302
Query: 181 VTH-KTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 215
V H SVD+LLRG+ P+ EIR +VV+ R
Sbjct: 303 VVHLDVAASVDLLLRGRQPVPEIRSIAADGSVVISR 338
>gi|113476582|ref|YP_722643.1| single-stranded nucleic acid binding R3H [Trichodesmium erythraeum
IMS101]
gi|110167630|gb|ABG52170.1| single-stranded nucleic acid binding R3H [Trichodesmium erythraeum
IMS101]
Length = 590
Score = 295 bits (756), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 143/216 (66%), Positives = 170/216 (78%), Gaps = 1/216 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ +L+ G+SIL +GRPGVGKTT +REIARVL+DE +KRVVI+DTSNEI GDGD+PHSA
Sbjct: 115 MIRELVETGRSILMLGRPGVGKTTALREIARVLADELEKRVVIIDTSNEIAGDGDVPHSA 174
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P QH+VMIEAVENH PEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 175 IGRARRMQVASPEQQHRVMIEAVENHTPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 234
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN++KNP LSDLIGG+ VTLGD+EAR R QK++LERKAPPTF +EM ERH W
Sbjct: 235 GNQIENLVKNPTLSDLIGGIQAVTLGDDEARRRSSQKTVLERKAPPTFEIAVEMLERHRW 294
Query: 181 VTH-KTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 215
V H + +VD LLRGK P E+R DD V + R
Sbjct: 295 VVHEQVADTVDALLRGKKPNPEVRTMDDNGEVKIKR 330
>gi|254409994|ref|ZP_05023774.1| R3H domain protein [Coleofasciculus chthonoplastes PCC 7420]
gi|196183030|gb|EDX78014.1| R3H domain protein [Coleofasciculus chthonoplastes PCC 7420]
Length = 598
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 141/216 (65%), Positives = 173/216 (80%), Gaps = 1/216 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
+++DL+ G+SIL +GRPGVGKTT +REIARVL+D+ QKRVVI+DTSNEI GDGDIPH A
Sbjct: 142 LIHDLVERGQSILMLGRPGVGKTTALREIARVLADDLQKRVVIIDTSNEIAGDGDIPHPA 201
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENH PEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 202 IGRARRMQVSRPELQHQVMIEAVENHTPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 261
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+IKNP LSDL+GG+ VTLGD+EAR R QK++LERKAPPTF +EM ER W
Sbjct: 262 GNQIENLIKNPTLSDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRW 321
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 215
V H++ +VD LLRG+ P ++R DD+ V++ R
Sbjct: 322 VVHESVADTVDALLRGRKPNPQMRTVDDQNKVIITR 357
>gi|434391656|ref|YP_007126603.1| single-stranded nucleic acid binding R3H domain-containing protein
[Gloeocapsa sp. PCC 7428]
gi|428263497|gb|AFZ29443.1| single-stranded nucleic acid binding R3H domain-containing protein
[Gloeocapsa sp. PCC 7428]
Length = 582
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 143/218 (65%), Positives = 170/218 (77%), Gaps = 1/218 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ G+SIL +GRPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGD+ H A
Sbjct: 115 MIRDLVETGRSILMLGRPGVGKTTALREIARVLADELNKRVVIIDTSNEIAGDGDVAHPA 174
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 175 IGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEAMAARTIAERGVQLVGTAH 234
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+IKNP LSDL+GG+ VTLGD+EAR RR QK++LERKAPPTF +EM ER W
Sbjct: 235 GNQIENLIKNPTLSDLVGGIQAVTLGDDEARRRRSQKTVLERKAPPTFEIAVEMLERQRW 294
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWK 217
V H++ +VD LLRG P ++R DD V V R +
Sbjct: 295 VVHESVADTVDSLLRGHQPSPQVRTVDDAGKVTVTRQQ 332
>gi|302832762|ref|XP_002947945.1| hypothetical protein VOLCADRAFT_57504 [Volvox carteri f.
nagariensis]
gi|300266747|gb|EFJ50933.1| hypothetical protein VOLCADRAFT_57504 [Volvox carteri f.
nagariensis]
Length = 366
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 141/204 (69%), Positives = 171/204 (83%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ G S+L +GRPGVGKTTV+REI R L+DE++KRVVIVDTSNEIGGDGD+PH A
Sbjct: 124 MLKDLVESGHSVLLLGRPGVGKTTVIREICRTLADEYRKRVVIVDTSNEIGGDGDVPHPA 183
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV + + QH VMIEAVENHMP+V++VDEIGTEAEA ACR+IAERGV LIGTAH
Sbjct: 184 IGGARRMQVADATQQHGVMIEAVENHMPQVVVVDEIGTEAEALACRTIAERGVQLIGTAH 243
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN+IKNP L+DL+GGV VTLGDEEAR R QK+ILERKAPPTF ++E+R R+++
Sbjct: 244 GCLLENLIKNPTLADLVGGVAAVTLGDEEARTRGTQKTILERKAPPTFPIVVEIRARNFY 303
Query: 181 VTHKTEKSVDMLLRGKTPLVEIRK 204
V H E SVD LL G+ P+V++R+
Sbjct: 304 VAHWVEDSVDQLLLGRMPVVQVRR 327
>gi|427739198|ref|YP_007058742.1| hypothetical protein Riv7116_5830 [Rivularia sp. PCC 7116]
gi|427374239|gb|AFY58195.1| hypothetical protein Riv7116_5830 [Rivularia sp. PCC 7116]
Length = 581
Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 142/219 (64%), Positives = 172/219 (78%), Gaps = 1/219 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ G+SIL +GRPGVGKTTV+REIARVL+D+ KRVVI+DTSNEI GDGD+PH A
Sbjct: 115 MIRDLVENGQSILMLGRPGVGKTTVLREIARVLADDLDKRVVIIDTSNEIAGDGDVPHPA 174
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P QH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV LIGTAH
Sbjct: 175 IGKARRMQVAHPDQQHQVMIEAVENHMPEVIVIDEIGTELEALASRTIAERGVQLIGTAH 234
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+IKNP LSDL+GG+ VTLGD+EAR R QK++LERKAPPTF +EM+ER W
Sbjct: 235 GNQIENLIKNPTLSDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMQERQRW 294
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKT 218
V H++ ++D LLRG+ P ++R DD V + R T
Sbjct: 295 VVHESVADTIDNLLRGRQPTPQVRTIDDNGKVAIARHLT 333
>gi|332711942|ref|ZP_08431872.1| hypothetical protein LYNGBM3L_69500 [Moorea producens 3L]
gi|332349270|gb|EGJ28880.1| hypothetical protein LYNGBM3L_69500 [Moorea producens 3L]
Length = 647
Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 143/216 (66%), Positives = 169/216 (78%), Gaps = 1/216 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ GKSIL +GRPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGDIPH A
Sbjct: 185 MIRDLVETGKSILMLGRPGVGKTTALREIARVLADELDKRVVIIDTSNEIAGDGDIPHPA 244
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P QH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGVML+GTAH
Sbjct: 245 IGRARRMQVASPEHQHQVMIEAVENHMPEVIVIDEIGTELEAQAARTIAERGVMLVGTAH 304
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+IKNP LSDL+GG+ VTLGD+EAR R QK++LERKAPPTF +EM ER W
Sbjct: 305 GNRIENLIKNPTLSDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERKRW 364
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 215
V H++ +VD LLRG+ P +R D+ V + R
Sbjct: 365 VVHESVADTVDNLLRGRQPNPPVRTEDENGKVTITR 400
>gi|443316490|ref|ZP_21045932.1| hypothetical protein Lep6406DRAFT_00028420 [Leptolyngbya sp. PCC
6406]
gi|442783923|gb|ELR93821.1| hypothetical protein Lep6406DRAFT_00028420 [Leptolyngbya sp. PCC
6406]
Length = 575
Score = 293 bits (751), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 142/214 (66%), Positives = 170/214 (79%), Gaps = 1/214 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ G SIL +GRPGVGKTT +REIARVL+D+ QKRVVI+DTSNEI GDGDIPH A
Sbjct: 109 MIRDLIETGGSILMLGRPGVGKTTALREIARVLADDLQKRVVIIDTSNEIAGDGDIPHPA 168
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV +P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 169 IGRARRMQVAQPELQHQVMIEAVENHMPEVIVIDEIGTELEATAARTIAERGVQLVGTAH 228
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN+IKNP LSDL+GG+ +VTLGD+EAR R QKS+LERKAPPTF +EM ER W
Sbjct: 229 GNRLENLIKNPTLSDLVGGIQSVTLGDDEARRRGSQKSVLERKAPPTFDIAVEMLERQRW 288
Query: 181 VTH-KTEKSVDMLLRGKTPLVEIRKRDDRFNVVV 213
V H + +VD LLRG+ P ++R+ + V +
Sbjct: 289 VIHEEVANTVDNLLRGRPPAAQVRETAENGRVTI 322
>gi|307155037|ref|YP_003890421.1| single-stranded nucleic acid-binding R3H domain-containing protein
[Cyanothece sp. PCC 7822]
gi|306985265|gb|ADN17146.1| single-stranded nucleic acid binding R3H domain protein [Cyanothece
sp. PCC 7822]
Length = 605
Score = 293 bits (751), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 141/219 (64%), Positives = 175/219 (79%), Gaps = 1/219 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ G+SIL +GRPGVGKTT +REIARVL+D++ KRVVI+DTSNEI GDGDIPH A
Sbjct: 146 MIEDLVETGQSILMLGRPGVGKTTALREIARVLADDYNKRVVIIDTSNEIAGDGDIPHPA 205
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 206 IGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 265
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+IKNP LSDL+GG+ VTLGDEEAR R QK++LERKAPPTF +EM ER W
Sbjct: 266 GNRIENLIKNPTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFQIAVEMLERQRW 325
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKT 218
V H+ ++VD LLRG+ P++++R D+ V + + ++
Sbjct: 326 VVHEDVAETVDNLLRGREPVLQVRTVDEHGEVKITQEES 364
>gi|428305288|ref|YP_007142113.1| single-stranded nucleic acid binding R3H domain-containing protein
[Crinalium epipsammum PCC 9333]
gi|428246823|gb|AFZ12603.1| single-stranded nucleic acid binding R3H domain-containing protein
[Crinalium epipsammum PCC 9333]
Length = 589
Score = 293 bits (751), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 141/216 (65%), Positives = 170/216 (78%), Gaps = 1/216 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ G SIL +GRPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGDIPH A
Sbjct: 124 MIRDLVETGNSILMLGRPGVGKTTALREIARVLADELHKRVVIIDTSNEIAGDGDIPHPA 183
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 184 IGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEAQAARTIAERGVQLVGTAH 243
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+IKNP LSDL+GG+ VTLGD+EAR R QK++LERKAPPTF +EM ERH W
Sbjct: 244 GNHIENLIKNPTLSDLVGGIQAVTLGDDEARRRASQKTVLERKAPPTFEIAVEMLERHRW 303
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 215
V H++ +VD LLR + P ++R ++ +V + R
Sbjct: 304 VVHESVSDTVDTLLRNRKPSPQVRTVNESGHVTITR 339
>gi|428203424|ref|YP_007082013.1| hypothetical protein Ple7327_3231 [Pleurocapsa sp. PCC 7327]
gi|427980856|gb|AFY78456.1| hypothetical protein Ple7327_3231 [Pleurocapsa sp. PCC 7327]
Length = 583
Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 143/213 (67%), Positives = 169/213 (79%), Gaps = 1/213 (0%)
Query: 2 VYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAI 61
+ DL+ GKSIL +GRPGVGKTT +REIARVL+DEF KRVVI+DTSNEI GDGDIPH AI
Sbjct: 125 IRDLVETGKSILLLGRPGVGKTTALREIARVLADEFHKRVVIIDTSNEIAGDGDIPHPAI 184
Query: 62 GTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 121
G ARRMQV P LQH+VMIEAVENHMPE+I++DEIGTE EA A R+IAERGV L+GTAHG
Sbjct: 185 GRARRMQVARPELQHQVMIEAVENHMPEIIVIDEIGTELEAMAARTIAERGVQLVGTAHG 244
Query: 122 EWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWV 181
+EN+IKNP LSDL+GG+ VTLGDEEAR R QK++LERKAPPTF IEM ER WV
Sbjct: 245 NRIENLIKNPTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFEIAIEMLERQRWV 304
Query: 182 THK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 213
H+ +VD LLRG+ P +++R D+ V +
Sbjct: 305 VHEDVANTVDDLLRGREPTLQVRTIDENGRVTI 337
>gi|209525857|ref|ZP_03274392.1| single-stranded nucleic acid binding R3H domain protein
[Arthrospira maxima CS-328]
gi|376002076|ref|ZP_09779925.1| conserved hypothetical protein [Arthrospira sp. PCC 8005]
gi|423062006|ref|ZP_17050796.1| single-stranded nucleic acid binding R3H domain protein
[Arthrospira platensis C1]
gi|209493666|gb|EDZ93986.1| single-stranded nucleic acid binding R3H domain protein
[Arthrospira maxima CS-328]
gi|375329564|emb|CCE15678.1| conserved hypothetical protein [Arthrospira sp. PCC 8005]
gi|406716579|gb|EKD11728.1| single-stranded nucleic acid binding R3H domain protein
[Arthrospira platensis C1]
Length = 592
Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 145/221 (65%), Positives = 174/221 (78%), Gaps = 3/221 (1%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ G SIL +GRPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGDIPH A
Sbjct: 115 MIRDLVETGGSILMLGRPGVGKTTALREIARVLADELHKRVVIIDTSNEIAGDGDIPHPA 174
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+I+ERGV LIGTAH
Sbjct: 175 IGRARRMQVASPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTISERGVQLIGTAH 234
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN++KNP L+DLIGG+ VTLGD+EAR R QK++LERKAPPTF IEM ER W
Sbjct: 235 GNRIENLMKNPTLADLIGGIQAVTLGDDEARRRGSQKTVLERKAPPTFDIAIEMLERERW 294
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVV--DRWKT 218
V H++ +VD LLRG P +++R+ +DR V V +R+ T
Sbjct: 295 VVHESVSTTVDGLLRGMQPTLQVRQMNDRGEVTVTQERYST 335
>gi|428218066|ref|YP_007102531.1| single-stranded nucleic acid binding R3H domain-containing protein
[Pseudanabaena sp. PCC 7367]
gi|427989848|gb|AFY70103.1| single-stranded nucleic acid binding R3H domain-containing protein
[Pseudanabaena sp. PCC 7367]
Length = 623
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 142/208 (68%), Positives = 168/208 (80%), Gaps = 1/208 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ GKSIL +GRPG+GKTT +RE+ARVL+DE KRVVI+DTSNEI GDGDIPH A
Sbjct: 121 MIRDLVETGKSILIMGRPGMGKTTALREVARVLADEMDKRVVIIDTSNEIAGDGDIPHPA 180
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV +P LQH+VM+EAVENHMPEVII+DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 181 IGRARRMQVAKPELQHQVMVEAVENHMPEVIIIDEIGTELEALAARTIAERGVQLVGTAH 240
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G L N+IKNP LSDLIGG+ +VTLGD+EAR R QKSILERKAPPTF IEM ER+ W
Sbjct: 241 GNKLANLIKNPTLSDLIGGIQSVTLGDDEARRRGTQKSILERKAPPTFEIAIEMGERYRW 300
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDD 207
H+ ++D LLRG+ P ++IR D+
Sbjct: 301 AVHEDVTSTIDGLLRGREPALQIRALDE 328
>gi|409992005|ref|ZP_11275221.1| single-stranded nucleic acid binding R3H [Arthrospira platensis
str. Paraca]
gi|291568683|dbj|BAI90955.1| Ycf45 protein [Arthrospira platensis NIES-39]
gi|409937126|gb|EKN78574.1| single-stranded nucleic acid binding R3H [Arthrospira platensis
str. Paraca]
Length = 592
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 145/221 (65%), Positives = 174/221 (78%), Gaps = 3/221 (1%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ G SIL +GRPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGDIPH A
Sbjct: 115 MIRDLVETGGSILMLGRPGVGKTTALREIARVLADELHKRVVIIDTSNEIAGDGDIPHPA 174
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+I+ERGV LIGTAH
Sbjct: 175 IGRARRMQVASPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTISERGVQLIGTAH 234
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN++KNP L+DLIGG+ VTLGD+EAR R QK++LERKAPPTF IEM ER W
Sbjct: 235 GNRIENLMKNPTLADLIGGIQAVTLGDDEARRRGSQKTVLERKAPPTFDIAIEMLERERW 294
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVV--DRWKT 218
V H++ +VD LLRG P +++R+ +DR V V +R+ T
Sbjct: 295 VVHESVSTTVDGLLRGMQPTLQVRQMNDRGEVTVTQERYST 335
>gi|440684212|ref|YP_007159007.1| single-stranded nucleic acid binding R3H domain-containing protein
[Anabaena cylindrica PCC 7122]
gi|428681331|gb|AFZ60097.1| single-stranded nucleic acid binding R3H domain-containing protein
[Anabaena cylindrica PCC 7122]
Length = 579
Score = 292 bits (748), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 142/216 (65%), Positives = 170/216 (78%), Gaps = 1/216 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ GKSIL +GRPGVGKTT +REIARVL+D+F KRVVI+DTSNEI GDGDI H A
Sbjct: 115 MIRDLVETGKSILMLGRPGVGKTTALREIARVLADDFNKRVVIIDTSNEIAGDGDIAHPA 174
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV +P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 175 IGRARRMQVAKPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 234
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+IKNP L DL+GG+ VTLGD+EAR R QK++LERKAPPTF +EM ER W
Sbjct: 235 GNQIENLIKNPTLCDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRW 294
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 215
V H+T +VD LLRG+ P + R D++ V + R
Sbjct: 295 VVHETVADTVDTLLRGRQPNPQTRTVDEKGKVAISR 330
>gi|218441457|ref|YP_002379786.1| single-stranded nucleic acid binding R3H domain-containing protein
[Cyanothece sp. PCC 7424]
gi|218174185|gb|ACK72918.1| single-stranded nucleic acid binding R3H domain protein [Cyanothece
sp. PCC 7424]
Length = 605
Score = 292 bits (748), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 141/214 (65%), Positives = 172/214 (80%), Gaps = 1/214 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ G+SIL +GRPGVGKTT +REIARVL+D++ KRVVI+DTSNEI GDGDIPH A
Sbjct: 146 MIEDLVETGQSILMLGRPGVGKTTALREIARVLADDYNKRVVIIDTSNEIAGDGDIPHPA 205
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 206 IGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 265
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G ++N+IKNP LSDL+GG+ VTLGDEEAR R QK++LERKAPPTF +EM ER W
Sbjct: 266 GNRIDNLIKNPTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFEIAVEMLERQRW 325
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 213
V H+ ++VD LLRG+ P+++IR D+ V +
Sbjct: 326 VVHEDVAETVDNLLRGREPILQIRTVDENGEVQI 359
>gi|428222285|ref|YP_007106455.1| hypothetical protein Syn7502_02321 [Synechococcus sp. PCC 7502]
gi|427995625|gb|AFY74320.1| hypothetical protein Syn7502_02321 [Synechococcus sp. PCC 7502]
Length = 588
Score = 292 bits (747), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 142/207 (68%), Positives = 166/207 (80%), Gaps = 1/207 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ D + GKSIL +GRPG+GKTT +REIARVL+DE KRVVI+DTSNEI GDGDIPH A
Sbjct: 121 MIRDFVETGKSILLLGRPGMGKTTALREIARVLADEINKRVVIIDTSNEIAGDGDIPHPA 180
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG +RRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV LIGTAH
Sbjct: 181 IGRSRRMQVATPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLIGTAH 240
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G L N+IKNP LSDL+GG+ +VTLGDEEAR R QKSILERKAPPTF IEM ER+ W
Sbjct: 241 GNQLANLIKNPTLSDLVGGIQSVTLGDEEARRRGTQKSILERKAPPTFDIAIEMTERYKW 300
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRD 206
+ HK +++D LLRG+ P ++R D
Sbjct: 301 IVHKDVAETIDGLLRGREPAFQVRAVD 327
>gi|428774384|ref|YP_007166172.1| single-stranded nucleic acid binding R3H domain-containing protein
[Cyanobacterium stanieri PCC 7202]
gi|428688663|gb|AFZ48523.1| single-stranded nucleic acid binding R3H domain-containing protein
[Cyanobacterium stanieri PCC 7202]
Length = 580
Score = 292 bits (747), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 143/216 (66%), Positives = 173/216 (80%), Gaps = 1/216 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ +L+ G+SIL +GRPGVGKTT +REIARVL+DE +KRVVI+DTSNEI GDGDIPH A
Sbjct: 124 MIRELVESGQSILLLGRPGVGKTTALREIARVLADELEKRVVIIDTSNEIAGDGDIPHPA 183
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVII+DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 184 IGRARRMQVARPELQHQVMIEAVENHMPEVIIIDEIGTELEALAARTIAERGVQLVGTAH 243
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN+IKNP LSDLIGG+ +VTLGD+EAR R QK++LERKAPPTF +EM ER W
Sbjct: 244 GNHLENLIKNPTLSDLIGGIQSVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMWERQKW 303
Query: 181 VTH-KTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 215
V H + ++VD +LRG+ + ++R+ DD V + R
Sbjct: 304 VVHEEVAQTVDNILRGRQIIPQLRQVDDEGKVSITR 339
>gi|75906351|ref|YP_320647.1| single-stranded nucleic acid binding R3H [Anabaena variabilis ATCC
29413]
gi|75700076|gb|ABA19752.1| Single-stranded nucleic acid binding R3H [Anabaena variabilis ATCC
29413]
Length = 579
Score = 292 bits (747), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 142/216 (65%), Positives = 169/216 (78%), Gaps = 1/216 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ GKSIL +GRPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGD+ H A
Sbjct: 115 MIRDLVETGKSILMLGRPGVGKTTALREIARVLADELHKRVVIIDTSNEIAGDGDVAHPA 174
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 175 IGRARRMQVAHPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 234
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+IKNP LSDL+GG+ VTLGD+EAR R QK++LERKAPPTF +EM ER W
Sbjct: 235 GNQIENLIKNPTLSDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRW 294
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 215
V H++ +VD LLRG+ P + R DD+ V + R
Sbjct: 295 VVHESVADTVDTLLRGRQPSPQTRTVDDQGKVAITR 330
>gi|220906040|ref|YP_002481351.1| single-stranded nucleic acid-binding R3H domain-containing protein
[Cyanothece sp. PCC 7425]
gi|219862651|gb|ACL42990.1| single-stranded nucleic acid binding R3H domain protein [Cyanothece
sp. PCC 7425]
Length = 584
Score = 292 bits (747), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 143/214 (66%), Positives = 170/214 (79%), Gaps = 1/214 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ GKSIL +GRPGVGKTT +RE+ARVL+DE KRVVI+DTSNEI GDGDIPH A
Sbjct: 124 MIRDLVESGKSILLLGRPGVGKTTALREMARVLADELLKRVVIIDTSNEIAGDGDIPHPA 183
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV LIGTAH
Sbjct: 184 IGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLIGTAH 243
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+IKNP LSDL+GG+ +VTLGDEEAR R QKS+LERKAPPTF +E+ ER W
Sbjct: 244 GNRIENLIKNPTLSDLVGGIQSVTLGDEEARRRGSQKSVLERKAPPTFEIAVELLERERW 303
Query: 181 VTH-KTEKSVDMLLRGKTPLVEIRKRDDRFNVVV 213
V H + ++VD LLRG+ P +IR + V++
Sbjct: 304 VVHEQVAETVDHLLRGRIPTPQIRTLSETGKVII 337
>gi|37523337|ref|NP_926714.1| hypothetical protein gvip509 [Gloeobacter violaceus PCC 7421]
gi|35214341|dbj|BAC91709.1| ycf45 [Gloeobacter violaceus PCC 7421]
Length = 535
Score = 292 bits (747), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 145/216 (67%), Positives = 170/216 (78%), Gaps = 1/216 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ G+SIL +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH A
Sbjct: 115 MIRDLVESGRSILLLGRPGVGKTTALREIARVLADDLHKRVVIIDTSNEIAGDGDIPHPA 174
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P QH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 175 IGRARRMQVARPEYQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 234
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G L+N+IKNP LSDLIGG+ TVTLGDEEAR R QKS+LERKAPPTF +EM+ER+ W
Sbjct: 235 GNKLDNLIKNPTLSDLIGGIQTVTLGDEEARRRGTQKSVLERKAPPTFEIAVEMQERYKW 294
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 215
+ HK ++VD LLR + PL E R + V V R
Sbjct: 295 IVHKDVAETVDYLLRDRKPLPETRALNGAGKVSVTR 330
>gi|428213099|ref|YP_007086243.1| hypothetical protein Oscil6304_2716 [Oscillatoria acuminata PCC
6304]
gi|428001480|gb|AFY82323.1| hypothetical protein Oscil6304_2716 [Oscillatoria acuminata PCC
6304]
Length = 615
Score = 291 bits (746), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 140/216 (64%), Positives = 169/216 (78%), Gaps = 1/216 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ G+SIL +GRPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGDIPH A
Sbjct: 144 MIRDLVESGQSILMLGRPGVGKTTALREIARVLADELHKRVVIIDTSNEIAGDGDIPHPA 203
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P QHKVMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 204 IGRARRMQVAAPEFQHKVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 263
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+IKNP L DL+GG+ +VTLGDEEAR R QK++LERKAPPTF +EM ER W
Sbjct: 264 GNQIENLIKNPTLCDLVGGIQSVTLGDEEARRRGSQKTVLERKAPPTFEIAVEMSERKRW 323
Query: 181 VTH-KTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 215
V H + ++VD LLRG+ P +++R + V + +
Sbjct: 324 VVHERVAETVDSLLRGRQPDLQVRTVSESGKVTITK 359
>gi|443327493|ref|ZP_21056117.1| hypothetical protein Xen7305DRAFT_00020990 [Xenococcus sp. PCC
7305]
gi|442792922|gb|ELS02385.1| hypothetical protein Xen7305DRAFT_00020990 [Xenococcus sp. PCC
7305]
Length = 584
Score = 291 bits (746), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 142/214 (66%), Positives = 169/214 (78%), Gaps = 1/214 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ G SIL +GRPGVGKTT +REIARVL+D+ +KRVVI+DTSNEI GDGDIPH A
Sbjct: 125 MIRDLIETGGSILLLGRPGVGKTTALREIARVLADDLEKRVVIIDTSNEIAGDGDIPHPA 184
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 185 IGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 244
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN+IKNP LSDL+GG+ VTLGD+EAR R QK++LERKAPPTF +EM ER W
Sbjct: 245 GNALENLIKNPTLSDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFAIAVEMLERQKW 304
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 213
+ H+ T +++D LLRG P +IR DD V +
Sbjct: 305 IVHEDTAQTIDSLLRGIEPGSQIRTVDDSGEVSI 338
>gi|427730839|ref|YP_007077076.1| hypothetical protein Nos7524_3698 [Nostoc sp. PCC 7524]
gi|427366758|gb|AFY49479.1| hypothetical protein Nos7524_3698 [Nostoc sp. PCC 7524]
Length = 578
Score = 291 bits (746), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 143/217 (65%), Positives = 169/217 (77%), Gaps = 1/217 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ GKSIL +GRPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGD+ H A
Sbjct: 115 MIRDLVETGKSILMLGRPGVGKTTALREIARVLADELNKRVVIIDTSNEIAGDGDVAHPA 174
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 175 IGRARRMQVAHPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 234
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+IKNP LSDL+GG+ VTLGD+EAR R QK++LERKAPPTF +EM ER W
Sbjct: 235 GNQIENLIKNPTLSDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRW 294
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDRW 216
V H++ +VD LLRG+ P + R DD+ V V R
Sbjct: 295 VVHESVADTVDTLLRGRQPNPQTRTVDDQGKVSVTRQ 331
>gi|354567011|ref|ZP_08986181.1| single-stranded nucleic acid binding R3H domain-containing protein
[Fischerella sp. JSC-11]
gi|353543312|gb|EHC12770.1| single-stranded nucleic acid binding R3H domain-containing protein
[Fischerella sp. JSC-11]
Length = 577
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 142/219 (64%), Positives = 169/219 (77%), Gaps = 1/219 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ GKSIL +GRPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGD+PH A
Sbjct: 115 MIRDLVETGKSILMLGRPGVGKTTALREIARVLADELNKRVVIIDTSNEIAGDGDVPHPA 174
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGT EA A R+IAERGV L+GTAH
Sbjct: 175 IGKARRMQVAHPELQHQVMIEAVENHMPEVIVIDEIGTALEALAARTIAERGVQLVGTAH 234
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+IKNP LSDL+GG+ VTLGD+EAR R QK++LERKAPPTF +EM ER W
Sbjct: 235 GNQIENLIKNPTLSDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRW 294
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKT 218
V H++ +VD LLRG P ++R D+ V + R T
Sbjct: 295 VVHESVSDTVDSLLRGHQPSPQVRTVDESGKVKITRQLT 333
>gi|119484836|ref|ZP_01619318.1| Single-stranded nucleic acid binding R3H [Lyngbya sp. PCC 8106]
gi|119457654|gb|EAW38778.1| Single-stranded nucleic acid binding R3H [Lyngbya sp. PCC 8106]
Length = 582
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 144/221 (65%), Positives = 174/221 (78%), Gaps = 3/221 (1%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ G+SIL +GRPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGDIPH A
Sbjct: 115 MIRDLVETGQSILMLGRPGVGKTTALREIARVLADELSKRVVIIDTSNEIAGDGDIPHPA 174
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV LIGTAH
Sbjct: 175 IGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEAIAARTIAERGVQLIGTAH 234
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN++KNP L+DLIGG+ VTLGDEEAR R QK++LERKAPPTF IEM ER W
Sbjct: 235 GNRIENLMKNPTLADLIGGIQAVTLGDEEARRRGSQKTVLERKAPPTFEIAIEMLERDRW 294
Query: 181 VTHKTEKS-VDMLLRGKTPLVEIRKRDD--RFNVVVDRWKT 218
V H++ S +D LLRG P +++R D+ ++V +R+ +
Sbjct: 295 VVHESVASTIDSLLRGMQPTLQVRTMDEAGEVSMVEERYNS 335
>gi|427705776|ref|YP_007048153.1| single-stranded nucleic acid binding R3H domain-containing protein
[Nostoc sp. PCC 7107]
gi|427358281|gb|AFY41003.1| single-stranded nucleic acid binding R3H domain-containing protein
[Nostoc sp. PCC 7107]
Length = 578
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 142/216 (65%), Positives = 168/216 (77%), Gaps = 1/216 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ GKSIL +GRPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGD+ H A
Sbjct: 115 MIRDLVETGKSILMLGRPGVGKTTALREIARVLADELNKRVVIIDTSNEIAGDGDVAHPA 174
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 175 IGRARRMQVAHPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 234
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+IKNP LSDL+GG+ VTLGD+EAR R QK++LERKAPPTF +EM ER W
Sbjct: 235 GNQIENLIKNPTLSDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRW 294
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 215
V H++ +VD LLRG+ P + R DD V + R
Sbjct: 295 VVHESVADTVDTLLRGRQPSPQTRTVDDNGKVAMTR 330
>gi|282897384|ref|ZP_06305386.1| Single-stranded nucleic acid binding R3H [Raphidiopsis brookii D9]
gi|281198036|gb|EFA72930.1| Single-stranded nucleic acid binding R3H [Raphidiopsis brookii D9]
Length = 573
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 143/219 (65%), Positives = 172/219 (78%), Gaps = 1/219 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ GKSIL +GRPGVGKTT +REIARVL+D+ KRV+I+DTSNEI GDGDI H A
Sbjct: 114 MIRDLVETGKSILMLGRPGVGKTTALREIARVLADDLHKRVIIIDTSNEIAGDGDIAHPA 173
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVII+DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 174 IGRARRMQVARPELQHQVMIEAVENHMPEVIIIDEIGTELEALASRTIAERGVQLVGTAH 233
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+IKNP LSDL+GG+ VTLGD+EAR RR QK++LERKAPPTF +EM ER W
Sbjct: 234 GNQIENLIKNPTLSDLVGGIQAVTLGDDEARRRRSQKTVLERKAPPTFEIAVEMLERERW 293
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKT 218
V H++ ++VD LLRG+ P + R D++ V + R T
Sbjct: 294 VVHESVAETVDTLLRGRQPNPQTRTVDEQGKVSIARPLT 332
>gi|318042567|ref|ZP_07974523.1| ATPase [Synechococcus sp. CB0101]
Length = 556
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 136/207 (65%), Positives = 168/207 (81%), Gaps = 1/207 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
MV DL+ G+S+L +GRPGVGKTT +REIARVL+DE KRVV++DTSNEI GDGDIPH A
Sbjct: 123 MVRDLMDSGQSLLLMGRPGVGKTTALREIARVLADELGKRVVVIDTSNEIAGDGDIPHPA 182
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGVML+ TAH
Sbjct: 183 IGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEAQAARTIAERGVMLVATAH 242
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G L N++KNP LSDL+GG+++VTLGDEEAR RR QK++LER A PTF +EM R+ W
Sbjct: 243 GNELANLVKNPTLSDLVGGIESVTLGDEEARRRRSQKTVLERAAEPTFPLAVEMHTRNRW 302
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRD 206
+ H+ ++VD+LLRG+ P ++R+ D
Sbjct: 303 LVHRDVARTVDLLLRGQLPRPQVRELD 329
>gi|282900213|ref|ZP_06308167.1| Single-stranded nucleic acid binding R3H [Cylindrospermopsis
raciborskii CS-505]
gi|281194888|gb|EFA69831.1| Single-stranded nucleic acid binding R3H [Cylindrospermopsis
raciborskii CS-505]
Length = 575
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 143/220 (65%), Positives = 171/220 (77%), Gaps = 1/220 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ GKSIL +GRPGVGKTT +REIARVL+D+ KRV+I+DTSNEI GDGDI H A
Sbjct: 114 MIRDLVETGKSILMLGRPGVGKTTALREIARVLADDLHKRVIIIDTSNEIAGDGDIAHPA 173
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVII+DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 174 IGRARRMQVARPELQHQVMIEAVENHMPEVIIIDEIGTELEALASRTIAERGVQLVGTAH 233
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+IKNP LSDL+GG+ VTLGD+EAR RR QK++LERKAPPTF +EM ER W
Sbjct: 234 GNQIENLIKNPTLSDLVGGIQAVTLGDDEARRRRSQKTVLERKAPPTFEIAVEMLERERW 293
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTY 219
V H++ +VD LLRG+ P + R D++ V + R T
Sbjct: 294 VVHESVADTVDALLRGRQPNPQTRTVDEQGKVSIARPLTL 333
>gi|443310712|ref|ZP_21040354.1| hypothetical protein Syn7509DRAFT_00032120 [Synechocystis sp. PCC
7509]
gi|442779237|gb|ELR89488.1| hypothetical protein Syn7509DRAFT_00032120 [Synechocystis sp. PCC
7509]
Length = 576
Score = 290 bits (743), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 140/204 (68%), Positives = 165/204 (80%), Gaps = 1/204 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ G+SIL +GRPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGDI H A
Sbjct: 115 MIRDLVGTGQSILMLGRPGVGKTTALREIARVLADELNKRVVIIDTSNEIAGDGDITHPA 174
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPE I++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 175 IGRARRMQVSRPELQHQVMIEAVENHMPEAIVIDEIGTELEAMAARTIAERGVQLVGTAH 234
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+IKNP LSDL+GG+ VTLGDEEAR RR QK++LERKAPPTF +EM+ER W
Sbjct: 235 GNQIENLIKNPTLSDLVGGIQAVTLGDEEARRRRSQKTVLERKAPPTFEIAVEMQERQRW 294
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIR 203
V H++ +VD LLRGK P ++R
Sbjct: 295 VIHESVADTVDNLLRGKPPTPQVR 318
>gi|17229801|ref|NP_486349.1| hypothetical protein alr2309 [Nostoc sp. PCC 7120]
gi|17131401|dbj|BAB74008.1| alr2309 [Nostoc sp. PCC 7120]
Length = 579
Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 141/216 (65%), Positives = 169/216 (78%), Gaps = 1/216 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ GKSIL +GRPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGD+ H A
Sbjct: 115 MIRDLVETGKSILMLGRPGVGKTTALREIARVLADELHKRVVIIDTSNEIAGDGDVAHPA 174
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 175 IGRARRMQVAHPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 234
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+IKNP LSDL+GG+ VTLGD+EAR R QK++LERKAPPTF +EM ER W
Sbjct: 235 GNQIENLIKNPTLSDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRW 294
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 215
V H++ +VD LLRG+ P + R D++ V + R
Sbjct: 295 VVHESVADTVDTLLRGRQPSPQTRTVDEQGKVAITR 330
>gi|159488761|ref|XP_001702371.1| hypothetical protein CHLREDRAFT_108035 [Chlamydomonas reinhardtii]
gi|158271165|gb|EDO96991.1| predicted protein [Chlamydomonas reinhardtii]
Length = 308
Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 140/203 (68%), Positives = 168/203 (82%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ G S+L +GRPGVGKTTV+RE+ L+DE++KRVVIVDTSNEIGGDGD+PH A
Sbjct: 106 MLKDLVESGHSVLLLGRPGVGKTTVIREMCATLADEYRKRVVIVDTSNEIGGDGDVPHPA 165
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV + QH VMIEAVENHMP+V++VDEIGTEAEA ACR+IAERGV LIGTAH
Sbjct: 166 IGGARRMQVADALQQHAVMIEAVENHMPQVVVVDEIGTEAEALACRTIAERGVQLIGTAH 225
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN+IKNP LSDL+GGV VTLGDEEAR R QK+ILERKAPPTF ++E+R R+++
Sbjct: 226 GCLLENLIKNPTLSDLVGGVAPVTLGDEEARLRGTQKTILERKAPPTFPIVVEIRARNFY 285
Query: 181 VTHKTEKSVDMLLRGKTPLVEIR 203
V H E SVD LL G+ P+V++R
Sbjct: 286 VAHWVEDSVDQLLLGRMPVVQVR 308
>gi|284929559|ref|YP_003422081.1| hypothetical protein UCYN_10250 [cyanobacterium UCYN-A]
gi|284810003|gb|ADB95700.1| uncharacterized conserved protein [cyanobacterium UCYN-A]
Length = 590
Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 140/221 (63%), Positives = 171/221 (77%), Gaps = 1/221 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ GKSIL +GRPGVGKTT +REIARVL+D+F KRVVI+DTSNEI GD D+PHS+
Sbjct: 127 IIKDLIETGKSILLLGRPGVGKTTALREIARVLADDFHKRVVIIDTSNEIAGDSDVPHSS 186
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 187 IGRARRMQVSAPELQHRVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 246
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN++KNP LSDL+GG+ +VTLGDEEA+ R CQK++LERKAPPTF IE+ ER W
Sbjct: 247 GNEIENLMKNPTLSDLVGGIQSVTLGDEEAKRRGCQKTVLERKAPPTFEIAIEILERQKW 306
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTYD 220
H+ ++D LLR + P EIR V +D K+ D
Sbjct: 307 NIHQDVACAIDSLLRNRKPNTEIRTVSQNGEVSIDHQKSND 347
>gi|87124959|ref|ZP_01080806.1| hypothetical protein RS9917_03118 [Synechococcus sp. RS9917]
gi|86167279|gb|EAQ68539.1| hypothetical protein RS9917_03118 [Synechococcus sp. RS9917]
Length = 547
Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 136/199 (68%), Positives = 162/199 (81%), Gaps = 1/199 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
+V DLL G+S+L +GRPGVGKTT +REIARVL+DE +KRVV++DTSNEI GDGDIPH A
Sbjct: 118 LVRDLLDSGQSLLLMGRPGVGKTTALREIARVLADELEKRVVVIDTSNEIAGDGDIPHPA 177
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGVML+ TAH
Sbjct: 178 IGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEAQAARTIAERGVMLVATAH 237
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G L N+IKNP L DL+GG+++VTLGDEEAR RR QK++LER A PTF +EM RH W
Sbjct: 238 GNALANLIKNPTLCDLVGGIESVTLGDEEARRRRSQKTVLERAAEPTFPLAVEMHSRHRW 297
Query: 181 VTHK-TEKSVDMLLRGKTP 198
H ++VD+LLRG+TP
Sbjct: 298 AVHADVGRTVDLLLRGQTP 316
>gi|428200832|ref|YP_007079421.1| hypothetical protein Ple7327_0407 [Pleurocapsa sp. PCC 7327]
gi|427978264|gb|AFY75864.1| hypothetical protein Ple7327_0407 [Pleurocapsa sp. PCC 7327]
Length = 492
Score = 290 bits (741), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 140/216 (64%), Positives = 169/216 (78%), Gaps = 1/216 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ GKSIL +GRPGVGKTT +REIARVL+D+ KRV+IVDTSNEI GDGDIPH A
Sbjct: 116 MIRDLVETGKSILMLGRPGVGKTTALREIARVLADDLNKRVIIVDTSNEIAGDGDIPHPA 175
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQ+KVMIEAVENHMP+ I++DEIGTE EA+A RSIAERGV L+GTAH
Sbjct: 176 IGRARRMQVASPELQYKVMIEAVENHMPQAIVIDEIGTELEAYAARSIAERGVQLVGTAH 235
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+IKNPIL DL+GG+ +VTLGDEEAR R QK++ ERKAPPTF +EM ER W
Sbjct: 236 GNSIENLIKNPILCDLVGGIQSVTLGDEEARRRGSQKTVRERKAPPTFDIAVEMLERQRW 295
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 215
V H++ +VD LLRG P +++R + V + R
Sbjct: 296 VVHESVADTVDSLLRGHQPHLQVRTMNGNGRVAITR 331
>gi|428205270|ref|YP_007089623.1| single-stranded nucleic acid binding R3H domain-containing protein
[Chroococcidiopsis thermalis PCC 7203]
gi|428007191|gb|AFY85754.1| single-stranded nucleic acid binding R3H domain-containing protein
[Chroococcidiopsis thermalis PCC 7203]
Length = 587
Score = 290 bits (741), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 139/218 (63%), Positives = 170/218 (77%), Gaps = 1/218 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M++DL+ G+SIL +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGD+PH A
Sbjct: 115 MIHDLVETGQSILLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDVPHPA 174
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P QH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 175 IGRARRMQVSRPEFQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 234
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+IKNP LSDL+GG+ +VTLGD+EAR RR QK++LERKAPPTF +EM ER W
Sbjct: 235 GNQIENLIKNPTLSDLVGGIQSVTLGDDEARRRRTQKTVLERKAPPTFEIAVEMLERQRW 294
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWK 217
H++ +VD LLRG+ P ++R D V + R
Sbjct: 295 TIHESVADTVDALLRGRIPNPQLRTVDADGKVTIVRQS 332
>gi|300863790|ref|ZP_07108717.1| single-stranded nucleic acid binding R3H [Oscillatoria sp. PCC
6506]
gi|300338218|emb|CBN53863.1| single-stranded nucleic acid binding R3H [Oscillatoria sp. PCC
6506]
Length = 586
Score = 290 bits (741), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 139/216 (64%), Positives = 172/216 (79%), Gaps = 1/216 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G+SIL +GRPGVGKTT +REIARVL+D+ +KRVVI+DTSNEI GDGDIPH A
Sbjct: 115 LIRDLVETGQSILLLGRPGVGKTTALREIARVLADDLEKRVVIIDTSNEIAGDGDIPHPA 174
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P QH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 175 IGRARRMQVSHPEFQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 234
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN++KNP L+DLIGG+ VTLGD+EAR R QK++LERKAPPTF +EM ER W
Sbjct: 235 GNRLENLVKNPTLADLIGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRW 294
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 215
V H+ ++VD+LLRG+ P +++R D V+V +
Sbjct: 295 VIHEHVSETVDILLRGRQPNLQVRSIGDSGEVIVSQ 330
>gi|428302124|ref|YP_007140430.1| single-stranded nucleic acid binding R3H domain-containing protein
[Calothrix sp. PCC 6303]
gi|428238668|gb|AFZ04458.1| single-stranded nucleic acid binding R3H domain-containing protein
[Calothrix sp. PCC 6303]
Length = 588
Score = 290 bits (741), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 142/219 (64%), Positives = 169/219 (77%), Gaps = 1/219 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ GKSIL +GRPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGD+PH A
Sbjct: 115 MIRDLVETGKSILMLGRPGVGKTTALREIARVLADELNKRVVIIDTSNEIAGDGDVPHPA 174
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P QH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 175 IGKARRMQVSRPEEQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 234
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+IKNP LSDL+GG+ VTLGD+EAR R QK++LERKA PTF +EM ER W
Sbjct: 235 GNQIENLIKNPTLSDLVGGIQAVTLGDDEARRRGSQKTVLERKALPTFEIAVEMHERQRW 294
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKT 218
V H++ +VDMLLRG+ P + R D+ V + R T
Sbjct: 295 VVHESVADTVDMLLRGRQPSPQTRTVDENGKVAIARHLT 333
>gi|86610056|ref|YP_478818.1| R3H domain-containing protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86558598|gb|ABD03555.1| R3H domain protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 639
Score = 290 bits (741), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 141/216 (65%), Positives = 168/216 (77%), Gaps = 1/216 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ G+S+L +GRPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGD+PH
Sbjct: 145 MIRDLVEQGRSMLLLGRPGVGKTTALREIARVLADELGKRVVIIDTSNEIAGDGDVPHPG 204
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQHKVMIEAVENHMPEV+++DEIGTE EA A R+IAERGV L+ TAH
Sbjct: 205 IGRARRMQVASPELQHKVMIEAVENHMPEVVVIDEIGTELEALASRTIAERGVQLVATAH 264
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G ++N+IKNP LSDL+GG+ +VTLGDEEAR R QKS+LERKAPPTF IEM ER W
Sbjct: 265 GNRIDNLIKNPTLSDLVGGIQSVTLGDEEARRRGSQKSVLERKAPPTFEIAIEMLERSRW 324
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 215
V H+ +VD LLR + PL + R D+ VV+ R
Sbjct: 325 VIHEDVAATVDRLLRNREPLTQTRSLDEHGQVVIVR 360
>gi|166367800|ref|YP_001660073.1| hypothetical protein MAE_50590 [Microcystis aeruginosa NIES-843]
gi|166090173|dbj|BAG04881.1| hypothetical protein MAE_50590 [Microcystis aeruginosa NIES-843]
Length = 603
Score = 289 bits (740), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 142/214 (66%), Positives = 168/214 (78%), Gaps = 1/214 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ GKS+L +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH A
Sbjct: 146 LINDLVETGKSLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPA 205
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 206 IGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 265
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN+IKNP LSDL+GG+ VTLGDEEAR R QK++LERKAPPTF IEM ER W
Sbjct: 266 GNQLENLIKNPTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFEIAIEMLERQRW 325
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 213
V H+ ++D LLRG+ + +IR D+ V V
Sbjct: 326 VIHEDVSTTIDQLLRGREAIAQIRWVDEEGKVQV 359
>gi|425464557|ref|ZP_18843867.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
gi|389833423|emb|CCI22104.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
Length = 581
Score = 289 bits (740), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 142/214 (66%), Positives = 168/214 (78%), Gaps = 1/214 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ GKS+L +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH A
Sbjct: 124 LINDLVETGKSLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPA 183
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 184 IGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 243
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN+IKNP LSDL+GG+ VTLGDEEAR R QK++LERKAPPTF IEM ER W
Sbjct: 244 GNQLENLIKNPTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFEIAIEMLERQRW 303
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 213
V H+ ++D LLRG+ + +IR D+ V V
Sbjct: 304 VIHEDVSTTIDQLLRGREAIAQIRWVDEEGKVQV 337
>gi|425459771|ref|ZP_18839257.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
gi|389827687|emb|CCI20874.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
Length = 603
Score = 289 bits (740), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 142/214 (66%), Positives = 168/214 (78%), Gaps = 1/214 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ GKS+L +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH A
Sbjct: 146 LINDLVETGKSLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPA 205
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 206 IGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 265
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN+IKNP LSDL+GG+ VTLGDEEAR R QK++LERKAPPTF IEM ER W
Sbjct: 266 GNQLENLIKNPTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFEIAIEMLERQRW 325
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 213
V H+ ++D LLRG+ + +IR D+ V V
Sbjct: 326 VIHEDVSTTIDQLLRGREAIAQIRWVDEEGKVQV 359
>gi|126659203|ref|ZP_01730341.1| hypothetical protein CY0110_04488 [Cyanothece sp. CCY0110]
gi|126619508|gb|EAZ90239.1| hypothetical protein CY0110_04488 [Cyanothece sp. CCY0110]
Length = 576
Score = 289 bits (740), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 140/214 (65%), Positives = 168/214 (78%), Gaps = 1/214 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ G+S+L +GRPGVGKTT +REIARVL+D+F KRVVI+DTSNEI GDGDIPH A
Sbjct: 115 MIRDLVETGQSLLLLGRPGVGKTTALREIARVLADDFDKRVVIIDTSNEIAGDGDIPHPA 174
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQHKVMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 175 IGRARRMQVAAPELQHKVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 234
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN++KNP LSDL+GG+ VTLGD+EAR R QK++LERKAPPTF IEM ER W
Sbjct: 235 GNQIENLMKNPTLSDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAIEMLERQKW 294
Query: 181 VTH-KTEKSVDMLLRGKTPLVEIRKRDDRFNVVV 213
V H ++D+LLR P ++R D+ NV +
Sbjct: 295 VVHDDVAYTIDILLRNGQPNPQVRTVDENGNVQI 328
>gi|422305000|ref|ZP_16392337.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
gi|389789775|emb|CCI14286.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
Length = 603
Score = 289 bits (739), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 142/214 (66%), Positives = 168/214 (78%), Gaps = 1/214 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ GKS+L +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH A
Sbjct: 146 LINDLVETGKSLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPA 205
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 206 IGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 265
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN+IKNP LSDL+GG+ VTLGDEEAR R QK++LERKAPPTF IEM ER W
Sbjct: 266 GNQLENLIKNPTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFDIAIEMLERQRW 325
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 213
V H+ ++D LLRG+ + +IR D+ V V
Sbjct: 326 VIHEDVSTTIDQLLRGREAIAQIRWVDEEGKVQV 359
>gi|425443006|ref|ZP_18823238.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
gi|389715784|emb|CCH99888.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
Length = 603
Score = 289 bits (739), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 142/214 (66%), Positives = 168/214 (78%), Gaps = 1/214 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ GKS+L +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH A
Sbjct: 146 LINDLVETGKSLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPA 205
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 206 IGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 265
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN+IKNP LSDL+GG+ VTLGDEEAR R QK++LERKAPPTF IEM ER W
Sbjct: 266 GNQLENLIKNPTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFDIAIEMLERQRW 325
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 213
V H+ ++D LLRG+ + +IR D+ V V
Sbjct: 326 VIHEDVSTTIDQLLRGREAIAQIRWVDEEGKVQV 359
>gi|425449052|ref|ZP_18828896.1| conserved hypothetical protein [Microcystis aeruginosa PCC 7941]
gi|389765138|emb|CCI08948.1| conserved hypothetical protein [Microcystis aeruginosa PCC 7941]
Length = 603
Score = 289 bits (739), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 141/214 (65%), Positives = 168/214 (78%), Gaps = 1/214 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ GKS+L +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH A
Sbjct: 146 LINDLVETGKSLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPA 205
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 206 IGRARRMQVSRPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 265
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN+IKNP LSDL+GG+ VTLGDEEAR R QK++LERKAPPTF IEM ER W
Sbjct: 266 GNQLENLIKNPTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFEIAIEMLERQRW 325
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 213
V H+ ++D LLRG+ + +IR D+ + V
Sbjct: 326 VIHEDVSTTIDQLLRGREAIAQIRWVDEEGKIQV 359
>gi|425455395|ref|ZP_18835115.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
gi|389803727|emb|CCI17377.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
Length = 603
Score = 289 bits (739), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 142/214 (66%), Positives = 168/214 (78%), Gaps = 1/214 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ GKS+L +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH A
Sbjct: 146 LINDLVETGKSLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPA 205
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 206 IGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 265
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN+IKNP LSDL+GG+ VTLGDEEAR R QK++LERKAPPTF IEM ER W
Sbjct: 266 GNQLENLIKNPTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFDIAIEMLERQRW 325
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 213
V H+ ++D LLRG+ + +IR D+ V V
Sbjct: 326 VIHEDVSTTIDQLLRGREAIAQIRWVDEEGKVQV 359
>gi|425447044|ref|ZP_18827039.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
gi|389732499|emb|CCI03582.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
Length = 603
Score = 289 bits (739), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 142/214 (66%), Positives = 168/214 (78%), Gaps = 1/214 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ GKS+L +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH A
Sbjct: 146 LINDLVETGKSLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPA 205
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 206 IGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 265
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN+IKNP LSDL+GG+ VTLGDEEAR R QK++LERKAPPTF IEM ER W
Sbjct: 266 GNQLENLIKNPTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFDIAIEMLERQRW 325
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 213
V H+ ++D LLRG+ + +IR D+ V V
Sbjct: 326 VIHEDVSTTIDQLLRGREAIAQIRWVDEEGKVQV 359
>gi|390442301|ref|ZP_10230310.1| conserved hypothetical protein [Microcystis sp. T1-4]
gi|389834387|emb|CCI34436.1| conserved hypothetical protein [Microcystis sp. T1-4]
Length = 581
Score = 288 bits (738), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 142/214 (66%), Positives = 168/214 (78%), Gaps = 1/214 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ GKS+L +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH A
Sbjct: 124 LINDLVETGKSLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPA 183
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 184 IGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 243
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN+IKNP LSDL+GG+ VTLGDEEAR R QK++LERKAPPTF IEM ER W
Sbjct: 244 GNQLENLIKNPTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFDIAIEMLERQRW 303
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 213
V H+ ++D LLRG+ + +IR D+ V V
Sbjct: 304 VIHEDVSTTIDQLLRGREAIAQIRWVDEEGKVQV 337
>gi|425472177|ref|ZP_18851028.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
gi|389881819|emb|CCI37683.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
Length = 581
Score = 288 bits (738), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 142/214 (66%), Positives = 168/214 (78%), Gaps = 1/214 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ GKS+L +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH A
Sbjct: 124 LINDLVETGKSLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPA 183
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 184 IGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 243
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN+IKNP LSDL+GG+ VTLGDEEAR R QK++LERKAPPTF IEM ER W
Sbjct: 244 GNQLENLIKNPTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFDIAIEMLERQRW 303
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 213
V H+ ++D LLRG+ + +IR D+ V V
Sbjct: 304 VIHEDVSTTIDQLLRGREAIAQIRWVDEEGKVQV 337
>gi|428224232|ref|YP_007108329.1| single-stranded nucleic acid binding R3H domain-containing protein
[Geitlerinema sp. PCC 7407]
gi|427984133|gb|AFY65277.1| single-stranded nucleic acid binding R3H domain-containing protein
[Geitlerinema sp. PCC 7407]
Length = 605
Score = 288 bits (738), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 140/216 (64%), Positives = 169/216 (78%), Gaps = 1/216 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ G+SIL +GRPGVGKTT +REIARVL+D+ +KRVVI+DTSNEI GDGDIPH A
Sbjct: 145 MIRDLVETGQSILLLGRPGVGKTTALREIARVLADDLEKRVVIIDTSNEIAGDGDIPHPA 204
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 205 IGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 264
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G + N+IKNP LSDL+GG+ +VTLGD+EAR R QK++LERKAPPTF +EM ER W
Sbjct: 265 GNQIANLIKNPTLSDLVGGIQSVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERERW 324
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 215
V H+ +VD LLRG+ P +IR + V + R
Sbjct: 325 VVHENVADTVDQLLRGRQPNPQIRTVSEGGKVTITR 360
>gi|440754058|ref|ZP_20933260.1| R3H domain protein [Microcystis aeruginosa TAIHU98]
gi|440174264|gb|ELP53633.1| R3H domain protein [Microcystis aeruginosa TAIHU98]
Length = 572
Score = 288 bits (738), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 142/214 (66%), Positives = 168/214 (78%), Gaps = 1/214 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ GKS+L +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH A
Sbjct: 115 LINDLVETGKSLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPA 174
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 175 IGRARRMQVSRPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 234
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN+IKNP LSDL+GG+ VTLGDEEAR R QK++LERKAPPTF IEM ER W
Sbjct: 235 GNQLENLIKNPTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFDIAIEMLERQRW 294
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 213
V H+ ++D LLRG+ + +IR D+ V V
Sbjct: 295 VIHEDVSTTIDQLLRGREAIAQIRWVDEEGKVQV 328
>gi|254423701|ref|ZP_05037419.1| R3H domain protein [Synechococcus sp. PCC 7335]
gi|196191190|gb|EDX86154.1| R3H domain protein [Synechococcus sp. PCC 7335]
Length = 665
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 140/214 (65%), Positives = 167/214 (78%), Gaps = 1/214 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ G SIL +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH A
Sbjct: 153 MIRDLVETGNSILMLGRPGVGKTTALREIARVLADDLMKRVVIIDTSNEIAGDGDIPHPA 212
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P QH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 213 IGRARRMQVSHPEKQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 272
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN+IKNP LSDL+GG+ +VTLGD+EAR R QKS+LERKAPPTF +EM ER W
Sbjct: 273 GNRLENLIKNPTLSDLVGGIQSVTLGDDEARRRGSQKSVLERKAPPTFDIAVEMLERQRW 332
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 213
V H+ +VD +LRG+ P ++R + VV+
Sbjct: 333 VVHEDVSSTVDFILRGQVPGQQVRSINAEDQVVI 366
>gi|425438133|ref|ZP_18818542.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
gi|389676734|emb|CCH94266.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
Length = 603
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 141/214 (65%), Positives = 168/214 (78%), Gaps = 1/214 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ GKS+L +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH A
Sbjct: 146 LINDLVETGKSLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPA 205
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 206 IGRARRMQVSRPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 265
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN+IKNP LSDL+GG+ VTLGDEEAR R QK++LERKAPPTF IEM ER W
Sbjct: 266 GNQLENLIKNPTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFDIAIEMLERQRW 325
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 213
V H+ ++D LLRG+ + +IR D+ + V
Sbjct: 326 VIHEDVSTTIDQLLRGREAIAQIRWVDEEGKIQV 359
>gi|428314326|ref|YP_007125303.1| hypothetical protein Mic7113_6310 [Microcoleus sp. PCC 7113]
gi|428255938|gb|AFZ21897.1| hypothetical protein Mic7113_6310 [Microcoleus sp. PCC 7113]
Length = 611
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 141/216 (65%), Positives = 169/216 (78%), Gaps = 1/216 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ G+SIL +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH A
Sbjct: 153 MIRDLVETGQSILMLGRPGVGKTTALREIARVLADDLHKRVVIIDTSNEIAGDGDIPHPA 212
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 213 IGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 272
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+IKNP LSDL+GG+ VTLGD+EAR R QK++LERKAPPTF IEM ER W
Sbjct: 273 GNRIENLIKNPTLSDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFDIAIEMLERQRW 332
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 215
V H++ +VD LLRG+ P ++R + V + R
Sbjct: 333 VVHESVSDTVDDLLRGRQPNPQVRTAHENGKVTITR 368
>gi|159026253|emb|CAO86402.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 603
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 141/214 (65%), Positives = 168/214 (78%), Gaps = 1/214 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ GKS+L +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH A
Sbjct: 146 LINDLVETGKSLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPA 205
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 206 IGRARRMQVSRPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 265
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN+IKNP LSDL+GG+ VTLGDEEAR R QK++LERKAPPTF IEM ER W
Sbjct: 266 GNQLENLIKNPTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFDIAIEMLERQRW 325
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 213
V H+ ++D LLRG+ + +IR D+ + V
Sbjct: 326 VIHEDVSTTIDQLLRGREAIAQIRWVDEEGKIQV 359
>gi|434396885|ref|YP_007130889.1| single-stranded nucleic acid binding R3H domain-containing protein
[Stanieria cyanosphaera PCC 7437]
gi|428267982|gb|AFZ33923.1| single-stranded nucleic acid binding R3H domain-containing protein
[Stanieria cyanosphaera PCC 7437]
Length = 584
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 139/208 (66%), Positives = 166/208 (79%), Gaps = 1/208 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ +L+ G+S+L +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH A
Sbjct: 125 MIRELIETGQSVLLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPA 184
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE E+ A R+IAERGV L+GTAH
Sbjct: 185 IGRARRMQVSRPELQHQVMIEAVENHMPEVIVIDEIGTELESLAARTIAERGVQLVGTAH 244
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+IKNP LSDLIGG+ VTLGD+EAR R QK++LERKAPPTF +EM ER W
Sbjct: 245 GNTIENLIKNPTLSDLIGGIQAVTLGDDEARRRGSQKTVLERKAPPTFAVAVEMLERQRW 304
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDD 207
V H+ ++VD LLRG P +IR DD
Sbjct: 305 VVHEDVAQTVDNLLRGIEPTTQIRTVDD 332
>gi|443669237|ref|ZP_21134472.1| R3H domain protein [Microcystis aeruginosa DIANCHI905]
gi|443330479|gb|ELS45192.1| R3H domain protein [Microcystis aeruginosa DIANCHI905]
Length = 572
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 141/214 (65%), Positives = 168/214 (78%), Gaps = 1/214 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ GKS+L +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH A
Sbjct: 115 LINDLVETGKSLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPA 174
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 175 IGRARRMQVSRPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 234
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN+IKNP LSDL+GG+ VTLGDEEAR R QK++LERKAPPTF IEM ER W
Sbjct: 235 GNQLENLIKNPTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFDIAIEMLERQRW 294
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 213
V H+ ++D LLRG+ + +IR D+ + V
Sbjct: 295 VIHEDVSTTIDQLLRGREAIAQIRWVDEEGKIQV 328
>gi|67922837|ref|ZP_00516336.1| Single-stranded nucleic acid binding R3H [Crocosphaera watsonii WH
8501]
gi|67855330|gb|EAM50590.1| Single-stranded nucleic acid binding R3H [Crocosphaera watsonii WH
8501]
Length = 604
Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 139/214 (64%), Positives = 169/214 (78%), Gaps = 1/214 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ G+S+L +GRPGVGKTT +REIARVL+D+F KRVVI+DTSNEI GDGDIPH A
Sbjct: 143 MIRDLVETGQSLLLLGRPGVGKTTALREIARVLADDFDKRVVIIDTSNEIAGDGDIPHPA 202
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQHK+MIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 203 IGRARRMQVATPELQHKIMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 262
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN++KNP LSDLIGG+ VTLGD+EAR R QK++LERKAPPTF IEM ER W
Sbjct: 263 GNQIENLLKNPTLSDLIGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAIEMLERQKW 322
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 213
V H+ ++D+LLR P ++R D++ V +
Sbjct: 323 VIHEDVANTIDILLRSGHPKPQVRTVDEKGEVQI 356
>gi|11465747|ref|NP_053891.1| hypothetical protein PopuCp096 [Porphyra purpurea]
gi|1723347|sp|P51281.1|YCF45_PORPU RecName: Full=Uncharacterized protein ycf45; AltName: Full=ORF565
gi|1276747|gb|AAC08167.1| trnS (chloroplast) [Porphyra purpurea]
Length = 565
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 138/214 (64%), Positives = 170/214 (79%), Gaps = 1/214 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DLL G SIL +G+PGVGKTT +REIARVLSDE +KRVVI+DTSNEI GDGDIPH A
Sbjct: 115 IIRDLLEQGDSILLLGKPGVGKTTAVREIARVLSDEMEKRVVIIDTSNEIAGDGDIPHPA 174
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV +P LQH+VMIEAVENHMPEVII+DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 175 IGRARRMQVAQPDLQHQVMIEAVENHMPEVIIIDEIGTELEALAARTIAERGVQLVGTAH 234
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +LE++IKNP L+DLIGG+ VTLGD+EA+ R QKSILERKA P F IE+ +R W
Sbjct: 235 GNYLESLIKNPTLADLIGGIQYVTLGDDEAKRRGTQKSILERKAAPAFQIAIEIHDRKAW 294
Query: 181 VTH-KTEKSVDMLLRGKTPLVEIRKRDDRFNVVV 213
+ H K E+++D +L+G P V+ R+ D +++
Sbjct: 295 IVHEKVEETIDQILQGHQPFVQKRQIQDNGRILI 328
>gi|428316917|ref|YP_007114799.1| single-stranded nucleic acid binding R3H domain-containing protein
[Oscillatoria nigro-viridis PCC 7112]
gi|428240597|gb|AFZ06383.1| single-stranded nucleic acid binding R3H domain-containing protein
[Oscillatoria nigro-viridis PCC 7112]
Length = 588
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 138/216 (63%), Positives = 171/216 (79%), Gaps = 1/216 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G+SIL +GRPGVGKTT +REIARVL+D+ +KRVVI+DTSNEI GDGDIPH A
Sbjct: 115 IIRDLVETGQSILMLGRPGVGKTTALREIARVLADDLEKRVVIIDTSNEIAGDGDIPHPA 174
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 175 IGRARRMQVSRPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 234
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN++KNP L+DLIGG+ VTLGD+EAR R QK++LERK+PPTF +EM ER W
Sbjct: 235 GNRLENLMKNPTLADLIGGIQAVTLGDDEARRRGSQKTVLERKSPPTFEIAVEMLERQRW 294
Query: 181 VTH-KTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 215
V H + S+D LLRG+ P +IR + V++++
Sbjct: 295 VIHERVADSIDTLLRGREPNQQIRSVSETGEVIIEQ 330
>gi|414079590|ref|YP_007001014.1| single-stranded nucleic acid binding R3H domain-containing protein
[Anabaena sp. 90]
gi|413972869|gb|AFW96957.1| single-stranded nucleic acid binding R3H domain-containing protein
[Anabaena sp. 90]
Length = 583
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 141/216 (65%), Positives = 168/216 (77%), Gaps = 1/216 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ G+SIL +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGD+ H A
Sbjct: 115 MIRDLVETGQSILMLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDVAHPA 174
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV +P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 175 IGRARRMQVSKPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 234
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+IKNP LSDL+GG+ VTLGD+EAR R QK++LERKAPPTF +EM ER W
Sbjct: 235 GNQIENLIKNPTLSDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRW 294
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 215
V H+ +VD LLRG+ P + R DD V V R
Sbjct: 295 VVHECVADTVDTLLRGRQPTPQTRTVDDNGKVGVVR 330
>gi|416393486|ref|ZP_11686016.1| hypothetical protein CWATWH0003_2819 [Crocosphaera watsonii WH
0003]
gi|357263482|gb|EHJ12485.1| hypothetical protein CWATWH0003_2819 [Crocosphaera watsonii WH
0003]
Length = 576
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 139/214 (64%), Positives = 169/214 (78%), Gaps = 1/214 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ G+S+L +GRPGVGKTT +REIARVL+D+F KRVVI+DTSNEI GDGDIPH A
Sbjct: 115 MIRDLVETGQSLLLLGRPGVGKTTALREIARVLADDFDKRVVIIDTSNEIAGDGDIPHPA 174
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQHK+MIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 175 IGRARRMQVATPELQHKIMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 234
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN++KNP LSDLIGG+ VTLGD+EAR R QK++LERKAPPTF IEM ER W
Sbjct: 235 GNQIENLLKNPTLSDLIGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAIEMLERQKW 294
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 213
V H+ ++D+LLR P ++R D++ V +
Sbjct: 295 VIHEDVANTIDILLRSGHPNPQVRTVDEKGEVQI 328
>gi|427719465|ref|YP_007067459.1| single-stranded nucleic acid binding R3H domain-containing protein
[Calothrix sp. PCC 7507]
gi|427351901|gb|AFY34625.1| single-stranded nucleic acid binding R3H domain-containing protein
[Calothrix sp. PCC 7507]
Length = 578
Score = 287 bits (734), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 142/216 (65%), Positives = 167/216 (77%), Gaps = 1/216 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ GKSIL +GRPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGD+ H A
Sbjct: 115 MIRDLVETGKSILMLGRPGVGKTTALREIARVLADELNKRVVIIDTSNEIAGDGDVAHPA 174
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P QH+VMIEAVENHMPEVII+DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 175 IGRARRMQVAHPDQQHQVMIEAVENHMPEVIIIDEIGTELEALAARTIAERGVQLVGTAH 234
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+IKNP L+DL+GG+ VTLGD+EAR R QK++LERKAPPTF +EM ER W
Sbjct: 235 GNQIENLIKNPTLADLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRW 294
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 215
V H++ +VD LLRG+ P + R DD V V R
Sbjct: 295 VVHESVADTVDNLLRGRQPNPQTRTVDDEGKVSVAR 330
>gi|428776905|ref|YP_007168692.1| single-stranded nucleic acid binding R3H domain-containing protein
[Halothece sp. PCC 7418]
gi|428691184|gb|AFZ44478.1| single-stranded nucleic acid binding R3H domain-containing protein
[Halothece sp. PCC 7418]
Length = 599
Score = 287 bits (734), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 140/212 (66%), Positives = 167/212 (78%), Gaps = 1/212 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ G+SIL +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH +
Sbjct: 147 MIRDLVETGRSILMLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPS 206
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 207 IGRARRMQVASPELQHQVMIEAVENHMPEVIVIDEIGTELEALATRTIAERGVQLVGTAH 266
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G L+N+IKNP LSDLIGG+ VTLGDEEAR R QK++LERKA PTF +EM ER W
Sbjct: 267 GNQLDNLIKNPTLSDLIGGIQAVTLGDEEARRRGSQKTVLERKALPTFDIAVEMLERRRW 326
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNV 211
V H+ ++D LLRG PL E+R +++ V
Sbjct: 327 VVHQDVSVTIDQLLRGHDPLTEVRSANEQGEV 358
>gi|443321273|ref|ZP_21050332.1| hypothetical protein GLO73106DRAFT_00025300 [Gloeocapsa sp. PCC
73106]
gi|442789018|gb|ELR98692.1| hypothetical protein GLO73106DRAFT_00025300 [Gloeocapsa sp. PCC
73106]
Length = 571
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 140/225 (62%), Positives = 171/225 (76%), Gaps = 1/225 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ +L+ G+SIL +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH A
Sbjct: 124 MIRELVESGQSILLLGRPGVGKTTALREIARVLADDLHKRVVIIDTSNEIAGDGDIPHPA 183
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 184 IGRARRMQVSRPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 243
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN+IKNP LSDL+GG+ VTLGD+EAR R QK++LERKAPPTF IEM E+ W
Sbjct: 244 GNRLENLIKNPTLSDLVGGIQAVTLGDDEARRRNSQKTVLERKAPPTFAIAIEMLEKQRW 303
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTYDRHDI 224
V H+ +++D LLRG +IR + + NV + Y + +
Sbjct: 304 VIHEDVAQTIDALLRGYATPQQIRTVNGQGNVEITEEPGYTTNQV 348
>gi|334116745|ref|ZP_08490837.1| single-stranded nucleic acid binding R3H domain-containing protein
[Microcoleus vaginatus FGP-2]
gi|333461565|gb|EGK90170.1| single-stranded nucleic acid binding R3H domain-containing protein
[Microcoleus vaginatus FGP-2]
Length = 588
Score = 286 bits (733), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 138/216 (63%), Positives = 171/216 (79%), Gaps = 1/216 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G+SIL +GRPGVGKTT +REIARVL+D+ +KRVVI+DTSNEI GDGDIPH A
Sbjct: 115 IIRDLVETGQSILMLGRPGVGKTTALREIARVLADDLEKRVVIIDTSNEIAGDGDIPHPA 174
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMP+VI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 175 IGRARRMQVSRPELQHQVMIEAVENHMPQVIVIDEIGTELEALAARTIAERGVQLVGTAH 234
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN++KNP L+DLIGG+ VTLGD+EAR R QK++LERKAPPTF IEM ER W
Sbjct: 235 GNRIENLMKNPTLADLIGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAIEMLERERW 294
Query: 181 VTH-KTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 215
V H + ++D LLRG+ P +IR + V+++R
Sbjct: 295 VIHERVADAIDTLLRGREPHQQIRSVSESGEVIIER 330
>gi|254432798|ref|ZP_05046501.1| ATPase [Cyanobium sp. PCC 7001]
gi|197627251|gb|EDY39810.1| ATPase [Cyanobium sp. PCC 7001]
Length = 579
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 137/205 (66%), Positives = 165/205 (80%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
MV DLL G+S+L +GRPGVGKTT +REIARVL+D+ KRVV++DTSNEI GDGDIPH A
Sbjct: 138 MVRDLLDSGQSLLLMGRPGVGKTTALREIARVLADDLGKRVVVIDTSNEIAGDGDIPHPA 197
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGVML+ TAH
Sbjct: 198 IGRARRMQVVRPDLQHEVMIEAVENHMPEVIVIDEIGTEREAQAARTIAERGVMLVATAH 257
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G L N+IKNP LSDL+GG+ +VTLGDEEAR RR QK++LER A PTF +EM RH W
Sbjct: 258 GNELTNLIKNPTLSDLVGGIQSVTLGDEEARRRRTQKTVLERAAEPTFPLAVEMHSRHRW 317
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRK 204
+ H+ ++VD LLRG+T ++R+
Sbjct: 318 LIHRDVAQTVDGLLRGQTARPQVRE 342
>gi|116075770|ref|ZP_01473029.1| hypothetical protein RS9916_39931 [Synechococcus sp. RS9916]
gi|116067085|gb|EAU72840.1| hypothetical protein RS9916_39931 [Synechococcus sp. RS9916]
Length = 560
Score = 286 bits (731), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 136/205 (66%), Positives = 163/205 (79%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
+V DLL G+S+L +GRPGVGKTT +REIARVL+DE KRVV++DTSNEI GDGDIPH A
Sbjct: 120 IVRDLLDSGESLLLMGRPGVGKTTALREIARVLADELGKRVVVIDTSNEIAGDGDIPHPA 179
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGVML+ TAH
Sbjct: 180 IGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEAQAARTIAERGVMLVATAH 239
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G L N+IKNP L DL+GG+++VTLGDEEAR RR QK++LER A PTF +EM +RH W
Sbjct: 240 GNALANLIKNPTLCDLVGGIESVTLGDEEARRRRSQKTVLERAAEPTFPLAVEMHQRHRW 299
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRK 204
H +VD+LLRG P ++R+
Sbjct: 300 AVHPDVGATVDLLLRGHAPRAQLRE 324
>gi|298491066|ref|YP_003721243.1| single-stranded nucleic acid-binding R3H domain-containing protein
['Nostoc azollae' 0708]
gi|298232984|gb|ADI64120.1| single-stranded nucleic acid binding R3H domain protein ['Nostoc
azollae' 0708]
Length = 579
Score = 286 bits (731), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 140/216 (64%), Positives = 168/216 (77%), Gaps = 1/216 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ GKSIL +G PGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDI HSA
Sbjct: 115 MIRDLVETGKSILMLGCPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIAHSA 174
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV +P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 175 IGRARRMQVAKPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 234
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+IKNP LSDL+GG+ VTLGD+EAR R QK++LERKAPPTF +EM ER W
Sbjct: 235 GNQIENLIKNPTLSDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMMERQRW 294
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 215
V H++ +VD LLRG+ + R D+ V + R
Sbjct: 295 VVHESVADTVDTLLRGRQANPQTRSMDENGKVAITR 330
>gi|148238773|ref|YP_001224160.1| ATPase [Synechococcus sp. WH 7803]
gi|147847312|emb|CAK22863.1| AAA ATPase superfamily protein with a possible REH domain
[Synechococcus sp. WH 7803]
Length = 545
Score = 286 bits (731), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 136/199 (68%), Positives = 160/199 (80%), Gaps = 1/199 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
MV DLL +S+L +GRPGVGKTT +REIARVL+D+ KRVV++DTSNEI GDGDIPH A
Sbjct: 118 MVRDLLDSEQSLLLMGRPGVGKTTALREIARVLADDLGKRVVVIDTSNEIAGDGDIPHPA 177
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGVML+ TAH
Sbjct: 178 IGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEAQAARTIAERGVMLVATAH 237
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G L N+IKNP L DL+GG+++VTLGDEEAR RR QK++LER A PTF IEM RH W
Sbjct: 238 GNALANLIKNPTLCDLVGGIESVTLGDEEARRRRSQKTVLERAAEPTFPIAIEMHSRHRW 297
Query: 181 VTH-KTEKSVDMLLRGKTP 198
H ++VD+LLRG+TP
Sbjct: 298 AVHDDVARTVDLLLRGQTP 316
>gi|427703065|ref|YP_007046287.1| hypothetical protein Cyagr_1807 [Cyanobium gracile PCC 6307]
gi|427346233|gb|AFY28946.1| hypothetical protein Cyagr_1807 [Cyanobium gracile PCC 6307]
Length = 534
Score = 285 bits (730), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 135/205 (65%), Positives = 165/205 (80%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
MV DLL G+S+L +GRPGVGKTT +REIARVL+D+ Q+RVV++DTSNEI GDGDIPH A
Sbjct: 103 MVRDLLDTGQSLLLMGRPGVGKTTALREIARVLADDLQRRVVVIDTSNEIAGDGDIPHPA 162
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGVML+ TAH
Sbjct: 163 IGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEAQAARTIAERGVMLVATAH 222
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G L N+I+NP LSDL+GG+ +VTLGDEEAR RR QK++LER A PTF +EM RH W
Sbjct: 223 GNELANLIRNPTLSDLVGGIQSVTLGDEEARRRRTQKTVLERAAEPTFPLAVEMHSRHRW 282
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRK 204
+ H+ +VD+LLRG+ ++R+
Sbjct: 283 LVHRDVAGTVDLLLRGQPSHPQVRE 307
>gi|378787319|gb|AFC39950.1| hypothetical protein [Porphyra umbilicalis]
Length = 565
Score = 285 bits (730), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 141/225 (62%), Positives = 172/225 (76%), Gaps = 4/225 (1%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DLL G SIL +G+PGVGKTT +REIARVL+DE +KRVVI+DTSNEI GDGDIPH A
Sbjct: 115 IIRDLLEQGDSILLLGKPGVGKTTAVREIARVLADEMEKRVVIIDTSNEIAGDGDIPHPA 174
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVII+DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 175 IGRARRMQVARPDLQHQVMIEAVENHMPEVIIIDEIGTELEALAARTIAERGVQLVGTAH 234
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LE++IKNP L+DLIGG+ VTLGD+EA+ R QKSILERKA P F IE+ +R W
Sbjct: 235 GNHLESLIKNPTLADLIGGIQYVTLGDDEAKRRGTQKSILERKAAPAFQIAIEIHDRKVW 294
Query: 181 VTH-KTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTYDRHDI 224
+ H K E+++D +L+G P V+ R+ D +++ K Y H I
Sbjct: 295 IVHDKVEQTIDQILQGHQPFVQKRQIQDNGRILI---KCYPSHSI 336
>gi|172037264|ref|YP_001803765.1| hypothetical protein cce_2349 [Cyanothece sp. ATCC 51142]
gi|354553853|ref|ZP_08973159.1| single-stranded nucleic acid binding R3H domain-containing protein
[Cyanothece sp. ATCC 51472]
gi|171698718|gb|ACB51699.1| unknown [Cyanothece sp. ATCC 51142]
gi|353554570|gb|EHC23960.1| single-stranded nucleic acid binding R3H domain-containing protein
[Cyanothece sp. ATCC 51472]
Length = 604
Score = 285 bits (730), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 139/214 (64%), Positives = 167/214 (78%), Gaps = 1/214 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ G+S+L +GRPGVGKTT +REIARVL+D+F KRVVI+DTSNEI GDGDIPH A
Sbjct: 143 MIRDLVETGQSLLLLGRPGVGKTTALREIARVLADDFDKRVVIIDTSNEIAGDGDIPHPA 202
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQHKVMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 203 IGRARRMQVATPELQHKVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 262
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN++KNP LSDL+GG+ VTLGD+EAR R QK++LERKAPPTF IEM ER W
Sbjct: 263 GNRIENLMKNPTLSDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAIEMLERQKW 322
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 213
V H+ ++D+LLR P + R D+ V +
Sbjct: 323 VVHEDVAYTIDILLRNGEPNPQTRTVDENGEVQI 356
>gi|116072568|ref|ZP_01469834.1| ATPase [Synechococcus sp. BL107]
gi|116064455|gb|EAU70215.1| ATPase [Synechococcus sp. BL107]
Length = 550
Score = 285 bits (729), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 138/205 (67%), Positives = 161/205 (78%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
MV DLL KS+L +GRPGVGKTT +REIARVL+DE Q+RVV++DTSNEI GDGDIPH A
Sbjct: 118 MVRDLLDSAKSLLLMGRPGVGKTTALREIARVLADEMQRRVVVIDTSNEIAGDGDIPHPA 177
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P QH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGVML+ TAH
Sbjct: 178 IGRARRMQVSSPERQHQVMIEAVENHMPEVIVIDEIGTELEAMAARTIAERGVMLVATAH 237
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G L N+IKNP LSDL+GG+ +VTLGD+EAR RR QK++LER A PTF +EM RH W
Sbjct: 238 GNALANLIKNPTLSDLVGGIQSVTLGDDEARRRRTQKTVLERAAEPTFPLAVEMHSRHRW 297
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRK 204
H +VD LLRG+ P VE R+
Sbjct: 298 SIHADVAATVDQLLRGQKPRVEQRE 322
>gi|81299436|ref|YP_399644.1| single-stranded nucleic acid binding R3H [Synechococcus elongatus
PCC 7942]
gi|81168317|gb|ABB56657.1| Single-stranded nucleic acid binding R3H [Synechococcus elongatus
PCC 7942]
Length = 588
Score = 285 bits (729), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 136/204 (66%), Positives = 166/204 (81%), Gaps = 1/204 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ G+S+LF+GRPGVGKTT +RE+ARVL+D+ KRVVI+DTSNEI GDGDIPH A
Sbjct: 134 MIRDLVETGQSLLFLGRPGVGKTTALREVARVLADDLLKRVVIIDTSNEIAGDGDIPHPA 193
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARR+QV P LQH+VMIEAVENHMPEVII+DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 194 IGRARRLQVARPELQHQVMIEAVENHMPEVIIIDEIGTELEALAARTIAERGVQLVGTAH 253
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+IKNP LSDL+GG+ +VTLGD+EAR R QK++LERKAPPTF +EM ER+ W
Sbjct: 254 GNQIENLIKNPTLSDLVGGIQSVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERYRW 313
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIR 203
V H+ +VD+LLR P ++R
Sbjct: 314 VVHEDVANTVDLLLRQGQPNPQVR 337
>gi|16329574|ref|NP_440302.1| hypothetical protein slr0692 [Synechocystis sp. PCC 6803]
gi|383321315|ref|YP_005382168.1| hypothetical protein SYNGTI_0406 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383324485|ref|YP_005385338.1| hypothetical protein SYNPCCP_0406 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383490369|ref|YP_005408045.1| hypothetical protein SYNPCCN_0406 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384435635|ref|YP_005650359.1| hypothetical protein SYNGTS_0406 [Synechocystis sp. PCC 6803]
gi|451813733|ref|YP_007450185.1| YCF45 protein [Synechocystis sp. PCC 6803]
gi|1652057|dbj|BAA16982.1| ycf45 [Synechocystis sp. PCC 6803]
gi|339272667|dbj|BAK49154.1| hypothetical protein SYNGTS_0406 [Synechocystis sp. PCC 6803]
gi|359270634|dbj|BAL28153.1| hypothetical protein SYNGTI_0406 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359273805|dbj|BAL31323.1| hypothetical protein SYNPCCN_0406 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359276975|dbj|BAL34492.1| hypothetical protein SYNPCCP_0406 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407957455|dbj|BAM50695.1| hypothetical protein BEST7613_1764 [Synechocystis sp. PCC 6803]
gi|451779702|gb|AGF50671.1| YCF45 protein [Synechocystis sp. PCC 6803]
Length = 589
Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 136/215 (63%), Positives = 169/215 (78%), Gaps = 1/215 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G+S+L +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH A
Sbjct: 124 LIQDLVETGESLLLLGRPGVGKTTALREIARVLADDLHKRVVIIDTSNEIAGDGDIPHPA 183
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 184 IGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 243
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN+IKNP LSDL+GG+ VTLGDEEAR R QK++LERKAPPTF +EM ER W
Sbjct: 244 GNRLENLIKNPTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFSMAVEMLERQKW 303
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVVD 214
H ++D LLRG+ P+ ++R +++ + ++
Sbjct: 304 TIHSDVALTIDNLLRGRPPVEQLRYMNEQGELQIE 338
>gi|186685424|ref|YP_001868620.1| single-stranded nucleic acid binding R3H domain-containing protein
[Nostoc punctiforme PCC 73102]
gi|186467876|gb|ACC83677.1| single-stranded nucleic acid binding R3H domain protein [Nostoc
punctiforme PCC 73102]
Length = 577
Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 139/216 (64%), Positives = 167/216 (77%), Gaps = 1/216 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ GKSIL +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGD+ H A
Sbjct: 115 MIRDLVETGKSILMLGRPGVGKTTALREIARVLADDLHKRVVIIDTSNEIAGDGDVAHPA 174
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P QH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 175 IGRARRMQVAHPEQQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 234
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+IKNP L+DL+GG+ VTLGD+EAR R QK++LERKAPPTF +EM ER W
Sbjct: 235 GNQIENLIKNPTLADLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRW 294
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 215
V H++ +VD LLRG+ + R DD+ V V R
Sbjct: 295 VVHESVADTVDNLLRGRQATPQTRTVDDQGKVAVTR 330
>gi|427417957|ref|ZP_18908140.1| hypothetical protein Lepto7375DRAFT_3694 [Leptolyngbya sp. PCC
7375]
gi|425760670|gb|EKV01523.1| hypothetical protein Lepto7375DRAFT_3694 [Leptolyngbya sp. PCC
7375]
Length = 594
Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/204 (68%), Positives = 162/204 (79%), Gaps = 1/204 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ G+SIL +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH A
Sbjct: 136 MIRDLVEAGQSILLLGRPGVGKTTALREIARVLADDLDKRVVIIDTSNEIAGDGDIPHPA 195
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P QH+VMIEAVENH PEVII+DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 196 IGRARRMQVARPEQQHQVMIEAVENHTPEVIIIDEIGTELEALAARTIAERGVQLVGTAH 255
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN+IKNP L+DLIGG+ TVTLGD+EAR R QKS+LERKAPPTF IEM ER W
Sbjct: 256 GNQLENLIKNPTLADLIGGIQTVTLGDDEARRRGSQKSVLERKAPPTFDMAIEMLERQRW 315
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIR 203
V H+ +VD LLRG+ ++R
Sbjct: 316 VVHEDVAATVDHLLRGRMSETQVR 339
>gi|434403513|ref|YP_007146398.1| hypothetical protein Cylst_1432 [Cylindrospermum stagnale PCC 7417]
gi|428257768|gb|AFZ23718.1| hypothetical protein Cylst_1432 [Cylindrospermum stagnale PCC 7417]
Length = 578
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 139/216 (64%), Positives = 167/216 (77%), Gaps = 1/216 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ GKSIL +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGD+ H A
Sbjct: 115 MIRDLVETGKSILMLGRPGVGKTTALREIARVLADDLHKRVVIIDTSNEIAGDGDVAHPA 174
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P QH+VMIEAVENHMPEVII+DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 175 IGRARRMQVAHPDQQHQVMIEAVENHMPEVIIIDEIGTELEALAARTIAERGVQLVGTAH 234
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+IKNP L DL+GG+ VTLGD+EAR R QK++LERKAPPTF +EM ER W
Sbjct: 235 GNQIENLIKNPTLCDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRW 294
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 215
V H++ +VD LLRG+ P + R D++ V + R
Sbjct: 295 VVHESVADTVDNLLRGRQPSPQTRTVDEQGKVAITR 330
>gi|218246053|ref|YP_002371424.1| single-stranded nucleic acid-binding R3H domain-containing protein
[Cyanothece sp. PCC 8801]
gi|257059102|ref|YP_003136990.1| single-stranded nucleic acid binding R3H domain-containing protein
[Cyanothece sp. PCC 8802]
gi|218166531|gb|ACK65268.1| single-stranded nucleic acid binding R3H domain protein [Cyanothece
sp. PCC 8801]
gi|256589268|gb|ACV00155.1| single-stranded nucleic acid binding R3H domain protein [Cyanothece
sp. PCC 8802]
Length = 602
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 138/204 (67%), Positives = 163/204 (79%), Gaps = 1/204 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ GKS+L +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH A
Sbjct: 146 MIQDLVETGKSLLLLGRPGVGKTTALREIARVLADDLHKRVVIIDTSNEIAGDGDIPHPA 205
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 206 IGRARRMQVASPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 265
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN++KNP LSDL+GG+ VTLGDEEAR R QK++LERKAPPTF IEM ER W
Sbjct: 266 GNRIENLLKNPTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFEIAIEMLERQRW 325
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIR 203
V H+ +VD+LLR P ++R
Sbjct: 326 VVHEDVSHTVDILLRNGEPNPQLR 349
>gi|78185517|ref|YP_377952.1| ATPase [Synechococcus sp. CC9902]
gi|78169811|gb|ABB26908.1| ATPase [Synechococcus sp. CC9902]
Length = 539
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 137/205 (66%), Positives = 161/205 (78%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
MV DLL +S+L +GRPGVGKTT +REIARVL+DE Q+RVV++DTSNEI GDGDIPH A
Sbjct: 118 MVRDLLDSAQSLLLMGRPGVGKTTALREIARVLADEMQRRVVVIDTSNEIAGDGDIPHPA 177
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P QH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGVML+ TAH
Sbjct: 178 IGRARRMQVSSPEQQHQVMIEAVENHMPEVIVIDEIGTELEAMAARTIAERGVMLVATAH 237
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G L N+IKNP LSDL+GG+ +VTLGD+EAR RR QK++LER A PTF +EM RH W
Sbjct: 238 GNALANLIKNPTLSDLVGGIQSVTLGDDEARRRRTQKTVLERAAEPTFPLAVEMHSRHRW 297
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRK 204
H +VD LLRG+ P VE R+
Sbjct: 298 SIHADVAATVDQLLRGQQPRVEQRE 322
>gi|221632236|ref|YP_002521457.1| ATPase-like protein [Thermomicrobium roseum DSM 5159]
gi|221156979|gb|ACM06106.1| ATPase-like protein [Thermomicrobium roseum DSM 5159]
Length = 562
Score = 283 bits (725), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 140/207 (67%), Positives = 168/207 (81%), Gaps = 1/207 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G+SIL +GRPGVGKTT++RE ARVL+D+ +KRV++VDTSNEI GDGDIPH A
Sbjct: 121 IIRDLIESGESILLLGRPGVGKTTMLRETARVLADDLRKRVIVVDTSNEIAGDGDIPHPA 180
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVP PSLQH VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV LIGTAH
Sbjct: 181 IGRARRMQVPTPSLQHAVMIEAVENHMPEVIVIDEIGTELEAAAARTIAERGVQLIGTAH 240
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LENI+ NP LSDLIGG+ +VTL DEEAR R QKSILERKAPPTF L+E++ R+
Sbjct: 241 GNTLENIMMNPTLSDLIGGIQSVTLSDEEARRRGTQKSILERKAPPTFGVLVEIQSRNRV 300
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRD 206
H+ +VD +LRG+ VEIR+R+
Sbjct: 301 AVHRDVAAAVDAILRGQPLRVEIRERN 327
>gi|390559754|ref|ZP_10244042.1| conserved hypothetical protein [Nitrolancetus hollandicus Lb]
gi|390173675|emb|CCF83341.1| conserved hypothetical protein [Nitrolancetus hollandicus Lb]
Length = 563
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 141/220 (64%), Positives = 170/220 (77%), Gaps = 1/220 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G+SIL +GRPGVGKTT++RE ARVL+D+ +KRVVIVDTSNEI GDGDIPH +
Sbjct: 135 IIRDLVESGESILLLGRPGVGKTTMLRETARVLADDLRKRVVIVDTSNEIAGDGDIPHPS 194
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVP PSLQH VMIEA+ENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 195 IGRARRMQVPSPSLQHAVMIEAIENHMPEVIVIDEIGTELEAAAARTIAERGVQLVGTAH 254
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN++ NP LSDLIGG+ +VTL DEEAR R QKSILERKAPPTF ++E++ R
Sbjct: 255 GNTLENLMMNPTLSDLIGGIQSVTLSDEEARRRGTQKSILERKAPPTFTVMVEIQARDRV 314
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTY 219
H+ SVD +LRG+ VEIR+R V V + Y
Sbjct: 315 AVHRDVAASVDSILRGRPLQVEIRQRGADGEVTVTLEQPY 354
>gi|427711502|ref|YP_007060126.1| hypothetical protein Syn6312_0350 [Synechococcus sp. PCC 6312]
gi|427375631|gb|AFY59583.1| hypothetical protein Syn6312_0350 [Synechococcus sp. PCC 6312]
Length = 571
Score = 283 bits (724), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 138/214 (64%), Positives = 168/214 (78%), Gaps = 1/214 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ +SIL +GRPGVGKTT +RE+ARVL+D+ KRVVI+DTSNEI GDGDIPH A
Sbjct: 123 LIRDLVESEQSILLLGRPGVGKTTALREMARVLADDLHKRVVIIDTSNEIAGDGDIPHPA 182
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
+G ARRMQV P LQH+VMIEAVENHMP+VI++DEIGTE EA A R+IAERGV LIGTAH
Sbjct: 183 LGRARRMQVARPELQHQVMIEAVENHMPQVIVIDEIGTELEALAARTIAERGVQLIGTAH 242
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN+IKNP L+DL+GG+ +VTLGD+EAR R QKS+LERKAPPTF +EM ER W
Sbjct: 243 GNRLENLIKNPTLADLVGGIQSVTLGDDEARRRGTQKSVLERKAPPTFPIAVEMLERERW 302
Query: 181 VTH-KTEKSVDMLLRGKTPLVEIRKRDDRFNVVV 213
V H ++VD LLRG TP + R ++ VV+
Sbjct: 303 VVHDNVAETVDQLLRGHTPNPQTRSVNENGEVVI 336
>gi|428780211|ref|YP_007171997.1| hypothetical protein Dacsa_1993 [Dactylococcopsis salina PCC 8305]
gi|428694490|gb|AFZ50640.1| hypothetical protein Dacsa_1993 [Dactylococcopsis salina PCC 8305]
Length = 602
Score = 283 bits (724), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 138/212 (65%), Positives = 166/212 (78%), Gaps = 1/212 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ G+SIL +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH +
Sbjct: 148 MIRDLVETGRSILMLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPS 207
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 208 IGRARRMQVSRPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 267
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G L+N+IKNP LSDLIGG+ VTLGDEEAR R QK++LERKA PTF +EM ER W
Sbjct: 268 GNRLDNLIKNPTLSDLIGGIQAVTLGDEEARRRGSQKTVLERKALPTFDIAVEMLERRRW 327
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNV 211
V H+ +++D LRG P E+R +++ V
Sbjct: 328 VVHQEVSETIDQFLRGHDPATEVRLANEQGEV 359
>gi|269925800|ref|YP_003322423.1| single-stranded nucleic acid binding R3H domain-containing protein
[Thermobaculum terrenum ATCC BAA-798]
gi|269789460|gb|ACZ41601.1| single-stranded nucleic acid binding R3H domain protein
[Thermobaculum terrenum ATCC BAA-798]
Length = 551
Score = 282 bits (722), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 142/216 (65%), Positives = 171/216 (79%), Gaps = 1/216 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ GKSIL +GRPGVGKTT++RE+ARVLS++ +KRV+IVDTSNEI GDGDIPH A
Sbjct: 127 IIRDLVETGKSILILGRPGVGKTTMLREVARVLSEDLRKRVIIVDTSNEIAGDGDIPHPA 186
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVP PS+QH VMIEAVENHMPEVII+DEIGTE EA A R+IAERGV LIGTAH
Sbjct: 187 IGRARRMQVPTPSMQHAVMIEAVENHMPEVIIIDEIGTELEAAAARTIAERGVQLIGTAH 246
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN++ NP LSDLIGG+ +VTLGDEEA+ R QKSILERKAPPTF L+E+++R
Sbjct: 247 GNTLENLMMNPTLSDLIGGIQSVTLGDEEAKRRGTQKSILERKAPPTFNILVEIQDRDRV 306
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 215
H ++VD +LRG E+R RD V ++R
Sbjct: 307 AIHPDVAETVDAILRGYEIKPEVRWRDATGKVHIER 342
>gi|158334816|ref|YP_001515988.1| hypothetical protein AM1_1653 [Acaryochloris marina MBIC11017]
gi|158305057|gb|ABW26674.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
Length = 577
Score = 282 bits (721), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 135/204 (66%), Positives = 164/204 (80%), Gaps = 1/204 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G+SIL +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH A
Sbjct: 124 IIRDLVESGRSILMLGRPGVGKTTALREIARVLADDLLKRVVIIDTSNEIAGDGDIPHPA 183
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENH PEVI++DEIGTE EA A R+IAERGV LIGTAH
Sbjct: 184 IGRARRMQVARPELQHQVMIEAVENHTPEVIVIDEIGTELEAAAARTIAERGVQLIGTAH 243
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN++KNP LSDL+GG+ +VTLGD+EAR R QKS+LERKAPPTF +EM ER W
Sbjct: 244 GNRIENLLKNPTLSDLVGGIQSVTLGDDEARRRGSQKSVLERKAPPTFDIAVEMLERSRW 303
Query: 181 VTH-KTEKSVDMLLRGKTPLVEIR 203
+ H + ++D LLRG+ P ++R
Sbjct: 304 IVHEEVANTIDNLLRGRMPNPQVR 327
>gi|317968814|ref|ZP_07970204.1| ATPase [Synechococcus sp. CB0205]
Length = 318
Score = 282 bits (721), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 132/196 (67%), Positives = 160/196 (81%), Gaps = 1/196 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
MV DL+ G+S+L +GRPGVGKTT +REIARVL+DE KRVV++DTSNEI GDGDIPH A
Sbjct: 123 MVRDLMDSGQSLLLMGRPGVGKTTALREIARVLADELDKRVVVIDTSNEIAGDGDIPHPA 182
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPE+I++DEIGTE EA A R+IAERGVML+ TAH
Sbjct: 183 IGRARRMQVTRPELQHQVMIEAVENHMPEIIVIDEIGTELEAQAARTIAERGVMLVATAH 242
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G L N++KNP LSDL+GG+++VTLGDEEAR RR QK++LER A PTF +EM R W
Sbjct: 243 GNELANLVKNPTLSDLVGGIESVTLGDEEARRRRTQKTVLERAAEPTFPMAVEMHSRDRW 302
Query: 181 VTHK-TEKSVDMLLRG 195
+ H+ ++VD+LLRG
Sbjct: 303 LVHRDVARTVDLLLRG 318
>gi|359461140|ref|ZP_09249703.1| hypothetical protein ACCM5_20609 [Acaryochloris sp. CCMEE 5410]
Length = 577
Score = 281 bits (720), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 135/204 (66%), Positives = 164/204 (80%), Gaps = 1/204 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G+SIL +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH A
Sbjct: 124 IIRDLVESGRSILMLGRPGVGKTTALREIARVLADDLLKRVVIIDTSNEIAGDGDIPHPA 183
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENH PEVI++DEIGTE EA A R+IAERGV LIGTAH
Sbjct: 184 IGRARRMQVARPELQHQVMIEAVENHTPEVIVIDEIGTELEAAAARTIAERGVQLIGTAH 243
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN++KNP LSDL+GG+ +VTLGD+EAR R QKS+LERKAPPTF +EM ER W
Sbjct: 244 GNRIENLLKNPTLSDLVGGIQSVTLGDDEARRRGSQKSVLERKAPPTFDIAVEMLERSRW 303
Query: 181 VTH-KTEKSVDMLLRGKTPLVEIR 203
+ H + ++D LLRG+ P ++R
Sbjct: 304 IVHEEVANTIDNLLRGRMPNPQVR 327
>gi|78211931|ref|YP_380710.1| ATPase [Synechococcus sp. CC9605]
gi|78196390|gb|ABB34155.1| ATPase [Synechococcus sp. CC9605]
Length = 546
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 135/205 (65%), Positives = 159/205 (77%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
MV DLL G+S+L +GRPGVGKTT +REIARVL+DE ++RVV++DTSNEI GDGDIPH A
Sbjct: 118 MVRDLLDGGQSLLLMGRPGVGKTTALREIARVLADELERRVVVIDTSNEIAGDGDIPHPA 177
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+ MIEAVENHMPEVI++DEIGTE EA A R+IAERGV+L+ TAH
Sbjct: 178 IGRARRMQVARPELQHQTMIEAVENHMPEVIVIDEIGTELEAQAARTIAERGVVLVATAH 237
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G L N+IKNP LSDL+GG+ VTLGDEEAR RR QK++LER A PTF +EM R W
Sbjct: 238 GNALANLIKNPTLSDLVGGIQAVTLGDEEARRRRSQKTVLERAAEPTFPVAVEMHSRQRW 297
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRK 204
H +VD LLRG P V+ R+
Sbjct: 298 AVHTDVAATVDQLLRGLKPRVQERE 322
>gi|260436547|ref|ZP_05790517.1| ATPase [Synechococcus sp. WH 8109]
gi|260414421|gb|EEX07717.1| ATPase [Synechococcus sp. WH 8109]
Length = 546
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 135/205 (65%), Positives = 159/205 (77%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
MV DLL G+S+L +GRPGVGKTT +REIARVL+DE ++RVV++DTSNEI GDGDIPH A
Sbjct: 118 MVRDLLDGGQSLLLMGRPGVGKTTALREIARVLADELERRVVVIDTSNEIAGDGDIPHPA 177
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+ MIEAVENHMPEVI++DEIGTE EA A R+IAERGV+L+ TAH
Sbjct: 178 IGRARRMQVARPELQHQTMIEAVENHMPEVIVIDEIGTELEAQAARTIAERGVVLVATAH 237
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G L N+IKNP LSDL+GG+ VTLGDEEAR RR QK++LER A PTF +EM R W
Sbjct: 238 GNALANLIKNPTLSDLVGGIQAVTLGDEEARRRRSQKTVLERAAEPTFPVAVEMHSRQRW 297
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRK 204
H +VD LLRG P V+ R+
Sbjct: 298 AVHTDVAATVDQLLRGLKPRVQERE 322
>gi|113954993|ref|YP_729670.1| R3H domain-containing protein [Synechococcus sp. CC9311]
gi|113882344|gb|ABI47302.1| R3H domain protein [Synechococcus sp. CC9311]
Length = 548
Score = 279 bits (714), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 135/205 (65%), Positives = 161/205 (78%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
MV DLL G+S+L +GRPGVGKTT +REIARVL+D+ KRVV++DTSNEI GDGDIPH A
Sbjct: 118 MVRDLLDSGESLLLMGRPGVGKTTALREIARVLADDLGKRVVVIDTSNEIAGDGDIPHPA 177
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+ TAH
Sbjct: 178 IGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEARAARTIAERGVTLVATAH 237
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G L N+IKNP L DLIGG+++VTLGD+EAR RR QK++LER A PTF +EM R W
Sbjct: 238 GNALSNLIKNPTLCDLIGGIESVTLGDDEARRRRSQKTVLERAAEPTFSMAVEMHSRSRW 297
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRK 204
++ ++VD LLRG+ P E RK
Sbjct: 298 AVYREVGRAVDALLRGQLPSPEERK 322
>gi|352096524|ref|ZP_08957351.1| single-stranded nucleic acid binding R3H domain-containing protein
[Synechococcus sp. WH 8016]
gi|351676174|gb|EHA59328.1| single-stranded nucleic acid binding R3H domain-containing protein
[Synechococcus sp. WH 8016]
Length = 543
Score = 279 bits (714), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 135/205 (65%), Positives = 161/205 (78%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
MV DLL+ G+S+L +GRPGVGKTT +REIARVLSD+ KRVV++DTSNEI GDGDIPH A
Sbjct: 118 MVRDLLYSGESLLLMGRPGVGKTTALREIARVLSDDLGKRVVVIDTSNEIAGDGDIPHPA 177
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+ TAH
Sbjct: 178 IGRARRMQVARPELQHHVMIEAVENHMPEVIVIDEIGTELEARAARTIAERGVTLVATAH 237
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G L N+IKNP L DLIGG+++VTLGD+EAR RR QK++LER A PTF +E+ R +W
Sbjct: 238 GNALSNLIKNPTLCDLIGGIESVTLGDDEARRRRSQKTVLERAAEPTFSMAVEIHSRSHW 297
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRK 204
++ ++VD LLRG P E RK
Sbjct: 298 AVYREVGRAVDALLRGHVPSPEERK 322
>gi|56750908|ref|YP_171609.1| hypothetical protein syc0899_c [Synechococcus elongatus PCC 6301]
gi|56685867|dbj|BAD79089.1| hypothetical protein YCF45 [Synechococcus elongatus PCC 6301]
Length = 588
Score = 279 bits (713), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 134/204 (65%), Positives = 164/204 (80%), Gaps = 1/204 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ G+S+LF+GRP VGKTT +RE+ARVL+D+ KRVVI+DTSNEI GDGDIPH A
Sbjct: 134 MIRDLVETGQSLLFLGRPDVGKTTALREVARVLADDLLKRVVIIDTSNEIAGDGDIPHPA 193
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARR+QV P LQH+VMIEAVENHMPEVII+DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 194 IGRARRLQVARPELQHQVMIEAVENHMPEVIIIDEIGTELEALAARTIAERGVQLVGTAH 253
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+IKNP LSDL+GG+ +VTLGD+EAR R QK++LERKAPPTF +EM ER+ W
Sbjct: 254 GNQIENLIKNPTLSDLVGGIQSVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERYRW 313
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIR 203
V H+ +V +LLR P ++R
Sbjct: 314 VVHEDVANTVGLLLRQGQPNPQVR 337
>gi|33863996|ref|NP_895556.1| ATPase AAA [Prochlorococcus marinus str. MIT 9313]
gi|33635580|emb|CAE21904.1| AAA ATPase superfamily [Prochlorococcus marinus str. MIT 9313]
Length = 545
Score = 279 bits (713), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 134/205 (65%), Positives = 160/205 (78%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
MV DLL G+S+L +GRPGVGKTT +REIARVL+D+ Q+RVV++DTSNEI GDGDIPH A
Sbjct: 118 MVRDLLDSGQSLLLMGRPGVGKTTALREIARVLADDLQRRVVVIDTSNEIAGDGDIPHPA 177
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P QH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+ TAH
Sbjct: 178 IGRARRMQVSLPEQQHQVMIEAVENHMPEVIVIDEIGTELEAQAARTIAERGVQLVATAH 237
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G L N+IKNP LSDL+GG+ VTLGDEEAR RR QK++LER A PTF +EM R+ W
Sbjct: 238 GNALANLIKNPTLSDLVGGIQAVTLGDEEARRRRTQKTVLERAAEPTFPVAVEMNTRNRW 297
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRK 204
H +VD LLRG+ P ++R+
Sbjct: 298 SIHADVAATVDQLLRGQLPRPQLRE 322
>gi|51209952|ref|YP_063616.1| conserved hypothetical plastid protein [Gracilaria tenuistipitata
var. liui]
gi|50657706|gb|AAT79691.1| conserved hypothetical plastid protein [Gracilaria tenuistipitata
var. liui]
Length = 562
Score = 279 bits (713), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 136/205 (66%), Positives = 168/205 (81%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DLL+ SIL +G+PGVGKTTV+REIARVL+DE +KRVVI+DTSNEI GDGD+PH A
Sbjct: 115 IIRDLLNTYPSILLLGKPGVGKTTVIREIARVLADEMEKRVVIIDTSNEIAGDGDVPHPA 174
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV +P LQH+VMIEA+ENHMPEVII+DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 175 IGRARRMQVSKPELQHQVMIEAIENHMPEVIIIDEIGTELEALAARTIAERGVQLVGTAH 234
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +L+++IKNPILSDLIGG+ VTLGD+EA+ R QKSILERKA P F IE+ +RH W
Sbjct: 235 GNYLDSLIKNPILSDLIGGIQYVTLGDDEAKRRGSQKSILERKASPAFQVAIEIHDRHSW 294
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRK 204
+ H++ ++VD LL+G V+ RK
Sbjct: 295 IVHESVGRAVDQLLQGVNLWVQRRK 319
>gi|124023992|ref|YP_001018299.1| ATPase AAA [Prochlorococcus marinus str. MIT 9303]
gi|123964278|gb|ABM79034.1| AAA ATPase superfamily protein [Prochlorococcus marinus str. MIT
9303]
Length = 545
Score = 279 bits (713), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 135/212 (63%), Positives = 163/212 (76%), Gaps = 1/212 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
MV DLL G+S+L +GRPGVGKTT +REIARVL+D+ Q+RVV++DTSNEI GDGDIPH A
Sbjct: 118 MVRDLLDSGQSLLLMGRPGVGKTTALREIARVLADDLQRRVVVIDTSNEIAGDGDIPHPA 177
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P QH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+ TAH
Sbjct: 178 IGRARRMQVSLPEQQHQVMIEAVENHMPEVIVIDEIGTELEAQAARTIAERGVQLVATAH 237
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G L N+IKNP LSDL+GG+ VTLGDEEAR RR QK++LER A PTF +E+ R+ W
Sbjct: 238 GNALPNLIKNPTLSDLVGGIQAVTLGDEEARRRRTQKTVLERAAEPTFPVAVEINTRNRW 297
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNV 211
H +VD LLRG+ P ++R+ D +V
Sbjct: 298 SIHADVAATVDQLLRGQLPRPQLRELDSDGSV 329
>gi|156743650|ref|YP_001433779.1| single-stranded nucleic acid binding R3H domain-containing protein
[Roseiflexus castenholzii DSM 13941]
gi|156234978|gb|ABU59761.1| single-stranded nucleic acid binding R3H domain protein
[Roseiflexus castenholzii DSM 13941]
Length = 538
Score = 278 bits (712), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 139/215 (64%), Positives = 167/215 (77%), Gaps = 3/215 (1%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ GKS+L +GRPGVGKTT++RE ARVL++E +KRVVIVDTSNEI GDGDIPH
Sbjct: 120 ILRDLIESGKSVLLLGRPGVGKTTMLRETARVLAEELRKRVVIVDTSNEIAGDGDIPHPG 179
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVP PS QH VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV LIGTAH
Sbjct: 180 IGRARRMQVPRPSEQHAVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLIGTAH 239
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRE-RHY 179
G+ LEN++ NP LSDLIGG+ VTLGDEEAR R QK++LERKAPPTF L+E++
Sbjct: 240 GQTLENLLSNPTLSDLIGGIQAVTLGDEEARRRGTQKTVLERKAPPTFDILVEIQNWDQV 299
Query: 180 WVTHKTEKSVDMLLRGKTPLVEIRKR--DDRFNVV 212
V +VD LLR ++P E+R+R D + VV
Sbjct: 300 TVYPDVASAVDNLLRAESPRAEVRRRAADGQIEVV 334
>gi|33866596|ref|NP_898155.1| hypothetical protein SYNW2064 [Synechococcus sp. WH 8102]
gi|33633374|emb|CAE08579.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
Length = 543
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 133/205 (64%), Positives = 160/205 (78%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
+V DLL G+S+L +GRPGVGKTT +REIARVL+D+ Q+RVV++DTSNEI GDGDIPH A
Sbjct: 118 LVRDLLDGGQSLLLMGRPGVGKTTALREIARVLADDLQRRVVVIDTSNEIAGDGDIPHPA 177
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P QH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGVML+ TAH
Sbjct: 178 IGRARRMQVARPEQQHQVMIEAVENHMPEVIVIDEIGTELEAQAARTIAERGVMLVATAH 237
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G L N+IKNP LSDL+GG+ +VTLGD+EAR RR QK++LER A PTF +EM R W
Sbjct: 238 GNALANLIKNPTLSDLVGGIQSVTLGDDEARRRRSQKTVLERAAEPTFPVAVEMHSRQRW 297
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRK 204
H +VD LLRG P ++ R+
Sbjct: 298 AVHTDVASTVDQLLRGLPPRIQERE 322
>gi|270308090|ref|YP_003330148.1| R3H domain-containing protein [Dehalococcoides sp. VS]
gi|270153982|gb|ACZ61820.1| R3H domain protein [Dehalococcoides sp. VS]
Length = 537
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 134/218 (61%), Positives = 171/218 (78%), Gaps = 1/218 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G+S+L +GRPGVGKTT++RE+ARVL+ + +KRVVIVDTSNEI GDGDIPH A
Sbjct: 145 IIQDLIQSGQSVLMLGRPGVGKTTMLREVARVLAGDLKKRVVIVDTSNEIAGDGDIPHPA 204
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P +QH VMIEAVENHMP+VI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 205 IGHARRMQVRTPDMQHAVMIEAVENHMPQVIVIDEIGTELEALAARTIAERGVQLVGTAH 264
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G L+N++ NP LSDLIGG+ +VTLGDEEAR R QK+ILER+APPTF ++E++ER+
Sbjct: 265 GNVLDNLMLNPTLSDLIGGIQSVTLGDEEARRRGTQKTILERRAPPTFQVIVEIQERNKV 324
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWK 217
H +VD +LRG +P EIR D+ VV+ + +
Sbjct: 325 AVHPDVGAAVDSILRGVSPSSEIRYLDENGEVVISKQQ 362
>gi|269836978|ref|YP_003319206.1| single-stranded nucleic acid binding R3H domain-containing protein
[Sphaerobacter thermophilus DSM 20745]
gi|269786241|gb|ACZ38384.1| single-stranded nucleic acid binding R3H domain protein
[Sphaerobacter thermophilus DSM 20745]
Length = 573
Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 136/220 (61%), Positives = 170/220 (77%), Gaps = 1/220 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
+V DL+ G+S+L +GRPGVGKTT++RE ARVL+D+ KRV+IVDTSNEI GDGDIPH +
Sbjct: 135 IVRDLVESGESLLLLGRPGVGKTTMLRETARVLADDLGKRVIIVDTSNEIAGDGDIPHPS 194
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVP P++QH VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 195 IGRARRMQVPTPAMQHAVMIEAVENHMPEVIVIDEIGTELEAAAARTIAERGVQLVGTAH 254
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN++ NP LSDLIGG+ +VTL DEEAR R QKSILERKAPPTF ++E++ R
Sbjct: 255 GNTLENLMMNPTLSDLIGGIQSVTLSDEEARRRGTQKSILERKAPPTFTMMVEIQARDRV 314
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTY 219
++ +VD +LRG+ VE+R+R +V V + Y
Sbjct: 315 AVYRDVASAVDAILRGQPLRVEVRQRAPDGSVTVTYEQPY 354
>gi|148657339|ref|YP_001277544.1| single-stranded nucleic acid binding R3H domain-containing protein
[Roseiflexus sp. RS-1]
gi|148569449|gb|ABQ91594.1| single-stranded nucleic acid binding R3H domain protein
[Roseiflexus sp. RS-1]
Length = 538
Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 135/206 (65%), Positives = 162/206 (78%), Gaps = 1/206 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ GKS+L +GRPGVGKTT++RE ARVL+++ +KRVVIVDTSNEI GDGDIPH
Sbjct: 120 ILRDLIESGKSVLLLGRPGVGKTTMLRETARVLAEDLRKRVVIVDTSNEIAGDGDIPHPG 179
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVP PS QH VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV LIGTAH
Sbjct: 180 IGRARRMQVPRPSEQHAVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLIGTAH 239
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRE-RHY 179
G+ LEN++ NP LSDLIGG+ VTLGDEEAR R QK++LERKAPPTF L+E++
Sbjct: 240 GQTLENLLSNPTLSDLIGGIQAVTLGDEEARRRGTQKTVLERKAPPTFDILVEIQNWDQV 299
Query: 180 WVTHKTEKSVDMLLRGKTPLVEIRKR 205
V +VD LLR + P E+R+R
Sbjct: 300 TVYPDVASAVDSLLRSEPPQAEVRRR 325
>gi|443474815|ref|ZP_21064783.1| single-stranded nucleic acid binding R3H domain-containing protein
[Pseudanabaena biceps PCC 7429]
gi|443020404|gb|ELS34366.1| single-stranded nucleic acid binding R3H domain-containing protein
[Pseudanabaena biceps PCC 7429]
Length = 591
Score = 276 bits (706), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 140/219 (63%), Positives = 165/219 (75%), Gaps = 2/219 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ GKSIL +G+PG+GKTT +REIARVL+D+ KRVVI+D+SNEI GDGDIPH A
Sbjct: 120 MIRDLVETGKSILLLGKPGMGKTTALREIARVLADDLNKRVVIIDSSNEIAGDGDIPHPA 179
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV +P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 180 IGRARRMQVSQPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAH 239
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRC-QKSILERKAPPTFYFLIEMRERHY 179
G L N+IKNP LSDLIGG+ +VTLGDEE R R QKSILERKA PTF +EM ER+
Sbjct: 240 GNQLANLIKNPTLSDLIGGIQSVTLGDEEMRRRGLPQKSILERKAQPTFDIAVEMWERYR 299
Query: 180 WVTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWK 217
W H ++DMLLR + P +IR D V K
Sbjct: 300 WAVHTDVAGTIDMLLRDRDPGRQIRAVSDAGEVTTTEEK 338
>gi|57234427|ref|YP_181509.1| R3H domain-containing protein [Dehalococcoides ethenogenes 195]
gi|57224875|gb|AAW39932.1| R3H domain protein [Dehalococcoides ethenogenes 195]
Length = 509
Score = 276 bits (706), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 134/218 (61%), Positives = 171/218 (78%), Gaps = 1/218 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G+S+L +GRPGVGKTT++RE+ARVL+ + +KRVVIVDTSNEI GDGDIPH A
Sbjct: 117 IIQDLIQSGQSVLMLGRPGVGKTTMLREVARVLAGDLKKRVVIVDTSNEIAGDGDIPHPA 176
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P +QH VMIEAVENHMP+VI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 177 IGHARRMQVRTPDMQHAVMIEAVENHMPQVIVIDEIGTELEALAARTIAERGVQLVGTAH 236
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G L+N++ NP LSDLIGG+ +VTLGDEEAR R QK+ILER+APPTF ++E++ER+
Sbjct: 237 GNVLDNLMLNPTLSDLIGGIQSVTLGDEEARRRGTQKTILERRAPPTFQVIVEIQERNKV 296
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWK 217
H +VD +LRG +P EIR D+ VV+ + +
Sbjct: 297 AVHPDVGAAVDSILRGVSPSSEIRYLDENGEVVISKQQ 334
>gi|88807880|ref|ZP_01123391.1| hypothetical protein WH7805_06956 [Synechococcus sp. WH 7805]
gi|88787919|gb|EAR19075.1| hypothetical protein WH7805_06956 [Synechococcus sp. WH 7805]
Length = 546
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 130/185 (70%), Positives = 152/185 (82%), Gaps = 1/185 (0%)
Query: 15 VGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSL 74
+GRPGVGKTT +REIARVL+DE QKRVV++DTSNEI GDGDIPH AIG ARRMQV P L
Sbjct: 132 MGRPGVGKTTALREIARVLADELQKRVVVIDTSNEIAGDGDIPHPAIGRARRMQVARPEL 191
Query: 75 QHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILS 134
QH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGVML+ TAHG L N+IKNP L
Sbjct: 192 QHQVMIEAVENHMPEVIVIDEIGTELEAQAARTIAERGVMLVATAHGNALTNLIKNPTLC 251
Query: 135 DLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVDMLL 193
DL+GG+++VTLGDEEAR RR QK++LER A PTF IEM RH W H ++VD+LL
Sbjct: 252 DLVGGIESVTLGDEEARRRRSQKTVLERAAEPTFPIAIEMHSRHRWAVHDDVARTVDLLL 311
Query: 194 RGKTP 198
RG++P
Sbjct: 312 RGQSP 316
>gi|71842246|ref|YP_277334.1| hypothetical chloroplast RF45 [Emiliania huxleyi]
gi|60101489|gb|AAX13833.1| hypothetical chloroplast RF45 [Emiliania huxleyi]
gi|336286160|gb|AEI29496.1| hypothetical chloroplast RF45 [Emiliania huxleyi]
Length = 558
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 134/205 (65%), Positives = 161/205 (78%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DLL KSIL +GRPGVGKTT +REIARVLSD+ KRV+I+DTSNEI GDGD+PH +
Sbjct: 115 IICDLLEKRKSILLLGRPGVGKTTAIREIARVLSDDMNKRVIIIDTSNEIAGDGDLPHPS 174
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P QH+VMIEAVENHMPE+II+DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 175 IGKARRMQVRNPQNQHQVMIEAVENHMPEIIIIDEIGTELEATAARTIAERGVQLVGTAH 234
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G L+N+IKNP L+DLIGG+ VTLGDEEAR R KSILERKAPPTF +E+ W
Sbjct: 235 GSALDNLIKNPTLTDLIGGIQYVTLGDEEARRRGSSKSILERKAPPTFEIAVEIHNVKTW 294
Query: 181 VTH-KTEKSVDMLLRGKTPLVEIRK 204
V H E+SVD+LL+G+ ++ R+
Sbjct: 295 VIHDNIERSVDLLLQGQNLALQKRE 319
>gi|309792154|ref|ZP_07686626.1| single-stranded nucleic acid binding R3H domain-containing protein
[Oscillochloris trichoides DG-6]
gi|308225695|gb|EFO79451.1| single-stranded nucleic acid binding R3H domain-containing protein
[Oscillochloris trichoides DG6]
Length = 552
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/210 (64%), Positives = 162/210 (77%), Gaps = 7/210 (3%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ GKSIL +G+PG GKTT++RE ARVL++EF+KRVVIVDTSNEI GDGDIPH
Sbjct: 120 IIRDLVETGKSILLLGKPGTGKTTLLRETARVLAEEFRKRVVIVDTSNEIAGDGDIPHPG 179
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVP P+ QH VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 180 IGRARRMQVPRPAEQHAVMIEAVENHMPEVIVIDEIGTELEAMAARTIAERGVQLVGTAH 239
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G L+N++ NP LSDL+GG+ VTLGDEEAR R QK++LERKAPPTF LIE+ W
Sbjct: 240 GNTLDNLMINPTLSDLVGGIQAVTLGDEEARRRGTQKTVLERKAPPTFDILIEI---ESW 296
Query: 181 ----VTHKTEKSVDMLLRGKTPLVEIRKRD 206
V +VD +LRG+ P E+R RD
Sbjct: 297 DSVTVYDDVAAAVDAILRGEDPPAELRSRD 326
>gi|356575518|ref|XP_003555887.1| PREDICTED: uncharacterized protein ycf45-like [Glycine max]
Length = 667
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 136/211 (64%), Positives = 167/211 (79%), Gaps = 1/211 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G SIL +G PGVGKTT++REIAR+L+DEF+KRVVIVDTSNEIGGDGD+PH+
Sbjct: 181 IIRDLVEDGGSILVIGPPGVGKTTLIREIARMLADEFRKRVVIVDTSNEIGGDGDVPHAG 240
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVP ++QH VMIEAVENHMPE II+DEIGTE EA A +IA+RGV L+GTAH
Sbjct: 241 IGRARRMQVPNVNMQHNVMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVGTAH 300
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEM-RERHY 179
G +ENIIKNP L L+GG+++VTLGDEEAR R+ QK+ILERK PPTF +EM +
Sbjct: 301 GMTIENIIKNPYLQILVGGIESVTLGDEEARKRKVQKTILERKGPPTFSCAVEMISKTEC 360
Query: 180 WVTHKTEKSVDMLLRGKTPLVEIRKRDDRFN 210
V H+ + +VD +L GK PL EIR+ DD N
Sbjct: 361 RVHHRLDATVDAILAGKPPLFEIRQWDDSDN 391
>gi|292490546|ref|YP_003525985.1| single-stranded nucleic acid binding R3H domain-containing protein
[Nitrosococcus halophilus Nc4]
gi|291579141|gb|ADE13598.1| single-stranded nucleic acid binding R3H domain protein
[Nitrosococcus halophilus Nc4]
Length = 500
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 136/198 (68%), Positives = 158/198 (79%), Gaps = 1/198 (0%)
Query: 2 VYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAI 61
+ DL+ G S+L +GRPGVGKTT +REIARVL+DEF KRV+I+DTSNEI GDGDIPH AI
Sbjct: 118 IRDLIERGASLLLLGRPGVGKTTRLREIARVLADEFGKRVIIIDTSNEIAGDGDIPHPAI 177
Query: 62 GTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 121
G+ARRMQVP P QH VMIEAVENHMPEVIIVDEIGT AEA A R+IAERGV LIGTAHG
Sbjct: 178 GSARRMQVPHPERQHGVMIEAVENHMPEVIIVDEIGTGAEATAARTIAERGVQLIGTAHG 237
Query: 122 EWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWV 181
LEN++ NP L+DL+GGV TVTLGD+EAR R QK+I ERKAPPTF ++E+ +R +
Sbjct: 238 NTLENLVMNPTLADLVGGVQTVTLGDDEARLRGTQKTINERKAPPTFDAVVEIVDREAVI 297
Query: 182 THK-TEKSVDMLLRGKTP 198
H T +VD LLRG P
Sbjct: 298 VHPDTAGAVDKLLRGLDP 315
>gi|206901965|ref|YP_002250502.1| single-stranded nucleic acid binding R3H [Dictyoglomus thermophilum
H-6-12]
gi|206741068|gb|ACI20126.1| single-stranded nucleic acid binding R3H [Dictyoglomus thermophilum
H-6-12]
Length = 515
Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 135/206 (65%), Positives = 163/206 (79%), Gaps = 1/206 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ D++ GK+IL +GRPGVGKTT++RE ARVL+DE KRV+I+DTSNEIGGDGDIPH A
Sbjct: 120 IIRDVIETGKNILLLGRPGVGKTTLLRETARVLADELGKRVIIIDTSNEIGGDGDIPHPA 179
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVP P+ QH VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV LIGTAH
Sbjct: 180 IGRARRMQVPNPAKQHDVMIEAVENHMPEVIVIDEIGTELEAKAARTIAERGVQLIGTAH 239
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRER-HY 179
G L+N++ NP LSDL+GG+ VTL DEEA+ R QK++LERKAPPTF +IE++ER
Sbjct: 240 GITLQNLLLNPTLSDLVGGIQVVTLSDEEAKRRGTQKTVLERKAPPTFQVVIEIQERDRL 299
Query: 180 WVTHKTEKSVDMLLRGKTPLVEIRKR 205
+ H K+VD LLRG EIR R
Sbjct: 300 AIHHDVAKTVDALLRGYIIKPEIRLR 325
>gi|217967175|ref|YP_002352681.1| single-stranded nucleic acid binding R3H domain-containing protein
[Dictyoglomus turgidum DSM 6724]
gi|217336274|gb|ACK42067.1| single-stranded nucleic acid binding R3H domain protein
[Dictyoglomus turgidum DSM 6724]
Length = 515
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 135/206 (65%), Positives = 163/206 (79%), Gaps = 1/206 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ D++ GK+IL +G+PGVGKTT++RE ARVL+DE KRV+I+DTSNEIGGDGDIPH A
Sbjct: 120 IIRDVIETGKNILLLGKPGVGKTTLLRETARVLADELGKRVIIIDTSNEIGGDGDIPHPA 179
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVP PS QH VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV LIGTAH
Sbjct: 180 IGRARRMQVPNPSKQHDVMIEAVENHMPEVIVIDEIGTELEAKAARTIAERGVQLIGTAH 239
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRER-HY 179
G L+N++ NP LSDL+GG+ VTL DEEA+ R QK++LERKAPPTF +IE++ER
Sbjct: 240 GITLQNLLLNPTLSDLVGGIQVVTLSDEEAKRRGTQKTVLERKAPPTFQVVIEIQERDRL 299
Query: 180 WVTHKTEKSVDMLLRGKTPLVEIRKR 205
+ H K+VD LLRG EIR R
Sbjct: 300 AIHHDVAKTVDALLRGYIIKPEIRVR 325
>gi|87300916|ref|ZP_01083758.1| hypothetical protein WH5701_05690 [Synechococcus sp. WH 5701]
gi|87284787|gb|EAQ76739.1| hypothetical protein WH5701_05690 [Synechococcus sp. WH 5701]
Length = 564
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 131/205 (63%), Positives = 161/205 (78%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
MV DLL G+S+L +GRPGVGKTT +REIARVL+D+ ++RVV++DTSNEI GDGDIPH A
Sbjct: 133 MVRDLLDSGQSLLLMGRPGVGKTTALREIARVLADDLERRVVVIDTSNEIAGDGDIPHPA 192
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P QH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGVML+ TAH
Sbjct: 193 IGRARRMQVARPEQQHQVMIEAVENHMPEVIVIDEIGTELEAQAARTIAERGVMLVATAH 252
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G L N+IKNP L+DLIGG+ +VTLGDEEAR R QK++LER A PTF +EM R W
Sbjct: 253 GNELANLIKNPTLADLIGGIQSVTLGDEEARRRGSQKTVLERCADPTFPLAVEMHSRSRW 312
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRK 204
+ H+ ++VD LRG+ ++R+
Sbjct: 313 LVHRDVARTVDQQLRGQPVRPQVRE 337
>gi|374249429|ref|YP_005088648.1| ycf45 gene product [Phaeocystis antarctica]
gi|340008120|gb|AEK26752.1| Ycf45 [Phaeocystis antarctica]
Length = 551
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 134/224 (59%), Positives = 168/224 (75%), Gaps = 1/224 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DLL KSIL +G+PGVGKTT +REIARVLSD +KRV+I+DTSNEI GDGD+PH +
Sbjct: 115 IIRDLLENKKSILLLGKPGVGKTTAIREIARVLSDGMKKRVIIIDTSNEIAGDGDLPHPS 174
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV QH++MIEAVENHMPE+II+DEIGTE EA A R+IAERGV LIGTAH
Sbjct: 175 IGKARRMQVSSTKNQHEIMIEAVENHMPEIIIIDEIGTELEATAARTIAERGVQLIGTAH 234
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN+IKNP ++DLIGG+ VTLGDEEA+ R KSILERK PPTF +E+ + W
Sbjct: 235 GNALENLIKNPTITDLIGGIQYVTLGDEEAKRRGSAKSILERKTPPTFDIAVEIHDSQTW 294
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTYDRHD 223
V H SVD+LLRG+ PL++ R +V + +Y++++
Sbjct: 295 VIHDNIGNSVDLLLRGQNPLLQKRNLTSGQDVNIHCEISYNKNE 338
>gi|159897031|ref|YP_001543278.1| single-stranded nucleic acid binding R3H domain-containing protein
[Herpetosiphon aurantiacus DSM 785]
gi|159890070|gb|ABX03150.1| single-stranded nucleic acid binding R3H domain protein
[Herpetosiphon aurantiacus DSM 785]
Length = 565
Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 134/217 (61%), Positives = 165/217 (76%), Gaps = 7/217 (3%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
+V DL+ GKSIL +G+PG GKTT++RE+ARVL+D+F KRVVIVDTSNEI GDGDIPH
Sbjct: 120 IVRDLVEAGKSILILGKPGTGKTTMLREVARVLADDFLKRVVIVDTSNEIAGDGDIPHPG 179
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P+ QH VMIEAVENHMP+VI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 180 IGRARRMQVARPAEQHNVMIEAVENHMPQVIVIDEIGTELEAQAARTIAERGVQLVGTAH 239
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN++ NP LSDLIGG+ VTLGDEEAR R QK++LERKAPPTF L+E+ W
Sbjct: 240 GNTLENLMLNPTLSDLIGGIQAVTLGDEEARRRGTQKTVLERKAPPTFDVLVEI---QSW 296
Query: 181 ----VTHKTEKSVDMLLRGKTPLVEIRKRDDRFNVVV 213
+ + +VD +L+G P E R +D++ +VV
Sbjct: 297 DDVTIYQEVASAVDSILQGNEPTAEQRTKDEQGEIVV 333
>gi|118411121|ref|YP_874515.1| hypothetical protein ThpsCp026 [Thalassiosira pseudonana]
gi|224015786|ref|XP_002297541.1| hypothetical protein THAPSDRAFT_bd2063 [Thalassiosira pseudonana
CCMP1335]
gi|116739868|gb|ABK20738.1| conserved hypothetical protein [Thalassiosira pseudonana]
gi|220967805|gb|EED86181.1| hypothetical protein THAPSDRAFT_bd2063 [Thalassiosira pseudonana
CCMP1335]
Length = 454
Score = 272 bits (696), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 130/222 (58%), Positives = 168/222 (75%), Gaps = 2/222 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DLL GKSIL +GRPGVGKTT++REIARVLSDE +KRV+I+DTSNEI GD D+PHS
Sbjct: 115 IIRDLLESGKSILILGRPGVGKTTIIREIARVLSDEMEKRVIIIDTSNEIAGDSDVPHSG 174
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVP+ LQHK+M+EA+ENHMP+VI++DEIGTE EA A R+IAE+GV L+GT H
Sbjct: 175 IGRARRMQVPKTELQHKIMLEAIENHMPQVIVIDEIGTELEALAARTIAEKGVQLVGTTH 234
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN+IKNP LSDLIGG+ VT+ DEEA+ R QKSILERK+ P F IE+ W
Sbjct: 235 GNCLENLIKNPSLSDLIGGIQYVTISDEEAKRRGTQKSILERKSYPAFQLAIEVNSLSSW 294
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTYDR 221
++ E SVD++LRG + +IR ++++ +K + +
Sbjct: 295 TIYENVENSVDLILRGNFHIAQIRNLKKNEKLIIN-YKKFQK 335
>gi|374853797|dbj|BAL56696.1| single-stranded nucleic acid binding R3H [uncultured gamma
proteobacterium]
Length = 501
Score = 272 bits (695), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 129/197 (65%), Positives = 159/197 (80%), Gaps = 1/197 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G+S+L +GRPGVGKTT +RE+ARVL+D+F KRV+++DTSNEIGGDGD+PH A
Sbjct: 117 LIRDLIESGRSLLLLGRPGVGKTTKLREVARVLADDFGKRVIVIDTSNEIGGDGDVPHPA 176
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG+ARRMQVP P QH VMIEAVENHMPEVI++DEIGT AEA A R+IAERGV LIGTAH
Sbjct: 177 IGSARRMQVPHPDKQHAVMIEAVENHMPEVIVIDEIGTAAEALAARTIAERGVQLIGTAH 236
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G L N+++NP L DL+GGV TVTLGDEEAR R QK++ ERKAPPTF ++E+ R
Sbjct: 237 GNTLANLVQNPTLCDLVGGVQTVTLGDEEARFRGTQKTVSERKAPPTFEQVVELVSRDEL 296
Query: 181 VTH-KTEKSVDMLLRGK 196
+ H T +VD LLRG+
Sbjct: 297 IVHLDTAAAVDALLRGE 313
>gi|302835702|ref|XP_002949412.1| hypothetical protein VOLCADRAFT_89849 [Volvox carteri f. nagariensis]
gi|300265239|gb|EFJ49431.1| hypothetical protein VOLCADRAFT_89849 [Volvox carteri f. nagariensis]
Length = 2804
Score = 271 bits (694), Expect = 1e-70, Method: Composition-based stats.
Identities = 132/206 (64%), Positives = 159/206 (77%), Gaps = 1/206 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
MV DL+ G SIL +GRPGVGKTT +RE++R+L+DE KRVVIVDTSNEIGGDGDIPHS
Sbjct: 2210 MVRDLVLSGASILLLGRPGVGKTTAIREVSRMLADECSKRVVIVDTSNEIGGDGDIPHSG 2269
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P QH+VMIEAVENHMP+VI++DEIGT E A R+IA+RGV L+ TAH
Sbjct: 2270 IGRARRMQVAAPEAQHRVMIEAVENHMPQVIVIDEIGTAEECAAARTIAQRGVQLVATAH 2329
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN+IKNP L+DL+GG+ +VTLGDEEA+ R QKSILER APPTF IEM ER W
Sbjct: 2330 GNQLENVIKNPQLADLVGGIQSVTLGDEEAKRRGVQKSILERAAPPTFDVCIEMLERTKW 2389
Query: 181 VTH-KTEKSVDMLLRGKTPLVEIRKR 205
H ++VD++L G ++R+R
Sbjct: 2390 RVHLDVGQAVDVVLAGGDAGGQVRER 2415
>gi|189095330|ref|YP_001936343.1| conserved hypothetical plastid protein Ycf45 [Heterosigma akashiwo]
gi|157694673|gb|ABV65949.1| conserved hypothetical plastid protein Ycf45 [Heterosigma akashiwo]
gi|157777904|gb|ABV70090.1| conserved hypothetical plastid protein Ycf45 [Heterosigma akashiwo]
Length = 451
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 131/205 (63%), Positives = 160/205 (78%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
+V DLL +SIL +G+PGVGKTT +REIAR+LSDE +KRVVIVDTSNEIGG+ DIPHS
Sbjct: 115 IVRDLLSSNQSILILGKPGVGKTTTIREIARILSDELRKRVVIVDTSNEIGGNSDIPHSG 174
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV + LQH VM+EAVENHMPEVIIVDEIGT+ E A R+IAERGV +IGT H
Sbjct: 175 IGRARRMQVSKSELQHNVMVEAVENHMPEVIIVDEIGTDLEVLAVRTIAERGVQVIGTVH 234
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN+IKNPIL D++GGV V LGDEEA+ R QK++LERKAPP+F IE+ ++ W
Sbjct: 235 GNNLENLIKNPILMDIVGGVQNVILGDEEAKKRGTQKNVLERKAPPSFQIAIEINQKMNW 294
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRK 204
H+ +SVD LL+ + P ++ RK
Sbjct: 295 FVHENITQSVDRLLQKQFPYLQSRK 319
>gi|452205008|ref|YP_007485137.1| R3H domain-containing protein [Dehalococcoides mccartyi BTF08]
gi|452112064|gb|AGG07795.1| R3H domain-containing protein [Dehalococcoides mccartyi BTF08]
Length = 509
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 132/218 (60%), Positives = 169/218 (77%), Gaps = 1/218 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ +S+L +GRPGVGKTT++RE+ARVL+ + +KRVVIVDTSNEI GDGDIPH A
Sbjct: 117 IIQDLIKSDQSVLMLGRPGVGKTTMLREVARVLAGDLKKRVVIVDTSNEIAGDGDIPHPA 176
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P +QH VMIEAVENHMP+VI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 177 IGHARRMQVRTPDMQHAVMIEAVENHMPQVIVIDEIGTELEALAARTIAERGVQLVGTAH 236
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G L+N++ NP LSDLIGG+ +VTLGDEEAR R QK+ILER+APPTF ++E+++R+
Sbjct: 237 GNVLDNLMLNPTLSDLIGGIQSVTLGDEEARRRGTQKTILERRAPPTFQVIVEIQDRNKV 296
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWK 217
H +VD +LRG +P EIR D VV+ + +
Sbjct: 297 AVHPDVGAAVDSILRGVSPSAEIRYLDGNGEVVISKQQ 334
>gi|452203573|ref|YP_007483706.1| R3H domain-containing protein [Dehalococcoides mccartyi DCMB5]
gi|452110632|gb|AGG06364.1| R3H domain-containing protein [Dehalococcoides mccartyi DCMB5]
Length = 509
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 132/218 (60%), Positives = 169/218 (77%), Gaps = 1/218 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ +S+L +GRPGVGKTT++RE+ARVL+ + +KRVVIVDTSNEI GDGDIPH A
Sbjct: 117 IIQDLIKSDQSVLMLGRPGVGKTTMLREVARVLAGDLKKRVVIVDTSNEIAGDGDIPHPA 176
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P +QH VMIEAVENHMP+VI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 177 IGHARRMQVRTPDMQHAVMIEAVENHMPQVIVIDEIGTELEALAARTIAERGVQLVGTAH 236
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G L+N++ NP LSDLIGG+ +VTLGDEEAR R QK+ILER+APPTF ++E+++R+
Sbjct: 237 GNVLDNLMLNPTLSDLIGGIQSVTLGDEEARRRGTQKTILERRAPPTFQVIVEIQDRNKV 296
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWK 217
H +VD +LRG +P EIR D VV+ + +
Sbjct: 297 AVHPDVGAAVDSILRGVSPSAEIRYLDGNGEVVISKQQ 334
>gi|73748587|ref|YP_307826.1| single-stranded nucleic acid binding R3H domain-containing protein
[Dehalococcoides sp. CBDB1]
gi|289432613|ref|YP_003462486.1| single-stranded nucleic acid binding R3H domain-containing protein
[Dehalococcoides sp. GT]
gi|73660303|emb|CAI82910.1| single-stranded nucleic acid binding R3H domain protein
[Dehalococcoides sp. CBDB1]
gi|288946333|gb|ADC74030.1| single-stranded nucleic acid binding R3H domain protein
[Dehalococcoides sp. GT]
Length = 509
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 132/218 (60%), Positives = 169/218 (77%), Gaps = 1/218 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ +S+L +GRPGVGKTT++RE+ARVL+ + +KRVVIVDTSNEI GDGDIPH A
Sbjct: 117 IIQDLIKSDQSVLMLGRPGVGKTTMLREVARVLAGDLKKRVVIVDTSNEIAGDGDIPHPA 176
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P +QH VMIEAVENHMP+VI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 177 IGHARRMQVRTPDMQHAVMIEAVENHMPQVIVIDEIGTELEALAARTIAERGVQLVGTAH 236
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G L+N++ NP LSDLIGG+ +VTLGDEEAR R QK+ILER+APPTF ++E+++R+
Sbjct: 237 GNVLDNLMLNPTLSDLIGGIQSVTLGDEEARRRGTQKTILERRAPPTFQVIVEIQDRNKV 296
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWK 217
H +VD +LRG +P EIR D VV+ + +
Sbjct: 297 AVHPDVGAAVDSILRGVSPSAEIRYLDGNGEVVISKQQ 334
>gi|147669347|ref|YP_001214165.1| single-stranded nucleic acid binding R3H domain-containing protein
[Dehalococcoides sp. BAV1]
gi|146270295|gb|ABQ17287.1| single-stranded nucleic acid binding R3H domain protein
[Dehalococcoides sp. BAV1]
Length = 509
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 132/218 (60%), Positives = 169/218 (77%), Gaps = 1/218 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ +S+L +GRPGVGKTT++RE+ARVL+ + +KRVVIVDTSNEI GDGDIPH A
Sbjct: 117 IIQDLIKSDQSVLMLGRPGVGKTTMLREVARVLAGDLKKRVVIVDTSNEIAGDGDIPHPA 176
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P +QH VMIEAVENHMP+VI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 177 IGHARRMQVRTPDMQHAVMIEAVENHMPQVIVIDEIGTELEALAARTIAERGVQLVGTAH 236
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G L+N++ NP LSDLIGG+ +VTLGDEEAR R QK+ILER+APPTF ++E+++R+
Sbjct: 237 GNVLDNLMLNPTLSDLIGGIQSVTLGDEEARRRGTQKTILERRAPPTFQVIVEIQDRNKV 296
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWK 217
H +VD +LRG +P EIR D VV+ + +
Sbjct: 297 AVHPDVGAAVDSILRGVSPSAEIRYLDGNGEVVISKQQ 334
>gi|296085962|emb|CBI31403.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 134/212 (63%), Positives = 165/212 (77%), Gaps = 1/212 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
+V DL+ G SIL +G PGVGKTT++REIAR+L+DE KRVVIVDTSNEIGGDGD+PHS
Sbjct: 80 IVRDLVEGGGSILVIGPPGVGKTTLIREIARMLADEHMKRVVIVDTSNEIGGDGDVPHSG 139
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV ++QH VMIEAVENHMPE II+DEIGTE EA A +IA+RGV L+GTAH
Sbjct: 140 IGRARRMQVSNVNMQHNVMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVGTAH 199
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRER-HY 179
G ++NI+KNP L L+GG+++VTLGDEEAR R+ QK+ILERK PPTF +EM R H
Sbjct: 200 GMTIDNIMKNPSLQILVGGIESVTLGDEEARKRKVQKTILERKGPPTFTCAVEMISRTHC 259
Query: 180 WVTHKTEKSVDMLLRGKTPLVEIRKRDDRFNV 211
V H+ + +VD +L GK+PL E+R D N+
Sbjct: 260 RVHHRLDATVDAILAGKSPLFELRHMDAEANI 291
>gi|148243212|ref|YP_001228369.1| AAA ATPase [Synechococcus sp. RCC307]
gi|147851522|emb|CAK29016.1| AAA ATPase superfamily protein [Synechococcus sp. RCC307]
Length = 470
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 132/216 (61%), Positives = 163/216 (75%), Gaps = 1/216 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
MV DLL G+S+L +GRPGVGKTT +REIARVL+D+ +RV+++DTSNEI GDGDIPH A
Sbjct: 131 MVRDLLDTGESLLLLGRPGVGKTTALREIARVLADDLGRRVMVIDTSNEIAGDGDIPHPA 190
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARR+QV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+ TAH
Sbjct: 191 IGRARRLQVARPQLQHRVMIEAVENHMPEVIVIDEIGTEQEAQAARTIAERGVQLVATAH 250
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G L N+++NP LSDL+GGV VTLGD+EAR R QK++LER A PTF +EM R W
Sbjct: 251 GNALANLVRNPTLSDLVGGVQAVTLGDDEARRRGSQKAVLERAAEPTFPLAVEMHSRSRW 310
Query: 181 VTH-KTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 215
+ H +VD LLRG++ E+R +VV+R
Sbjct: 311 MVHGDVAATVDQLLRGQSSAPEVRSVGPDGVLVVER 346
>gi|300087975|ref|YP_003758497.1| single-stranded nucleic acid-binding R3H domain-containing protein
[Dehalogenimonas lykanthroporepellens BL-DC-9]
gi|299527708|gb|ADJ26176.1| single-stranded nucleic acid binding R3H domain protein
[Dehalogenimonas lykanthroporepellens BL-DC-9]
Length = 512
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 131/208 (62%), Positives = 161/208 (77%), Gaps = 1/208 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G+S+L +GRPGVGKTT++RE ARVL+D+ +KRVVIVDTSNEI GDGDIPH A
Sbjct: 117 IIDDLIQSGQSVLLMGRPGVGKTTMLRETARVLADDLRKRVVIVDTSNEIAGDGDIPHPA 176
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P QH VMIEAVENHMPEV+++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 177 IGRARRMQVKSPERQHAVMIEAVENHMPEVVVIDEIGTELEAQAARTIAERGVQLVGTAH 236
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G L N+++NP L+DLIGG+ VTLGDEEAR R QK++LERK+PPTF ++E++ER
Sbjct: 237 GNTLANLMQNPTLADLIGGIQAVTLGDEEARRRGTQKTVLERKSPPTFNVVVEIQERDQV 296
Query: 181 VTH-KTEKSVDMLLRGKTPLVEIRKRDD 207
H +VD +LRG P EIR D
Sbjct: 297 AVHPNVSVTVDAILRGLHPETEIRSLGD 324
>gi|359486767|ref|XP_002271948.2| PREDICTED: uncharacterized protein ycf45-like [Vitis vinifera]
Length = 687
Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 134/212 (63%), Positives = 165/212 (77%), Gaps = 1/212 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
+V DL+ G SIL +G PGVGKTT++REIAR+L+DE KRVVIVDTSNEIGGDGD+PHS
Sbjct: 205 IVRDLVEGGGSILVIGPPGVGKTTLIREIARMLADEHMKRVVIVDTSNEIGGDGDVPHSG 264
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV ++QH VMIEAVENHMPE II+DEIGTE EA A +IA+RGV L+GTAH
Sbjct: 265 IGRARRMQVSNVNMQHNVMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVGTAH 324
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRER-HY 179
G ++NI+KNP L L+GG+++VTLGDEEAR R+ QK+ILERK PPTF +EM R H
Sbjct: 325 GMTIDNIMKNPSLQILVGGIESVTLGDEEARKRKVQKTILERKGPPTFTCAVEMISRTHC 384
Query: 180 WVTHKTEKSVDMLLRGKTPLVEIRKRDDRFNV 211
V H+ + +VD +L GK+PL E+R D N+
Sbjct: 385 RVHHRLDATVDAILAGKSPLFELRHMDAEANI 416
>gi|77166422|ref|YP_344947.1| single-stranded nucleic acid binding R3H [Nitrosococcus oceani ATCC
19707]
gi|254436235|ref|ZP_05049742.1| R3H domain protein [Nitrosococcus oceani AFC27]
gi|76884736|gb|ABA59417.1| Single-stranded nucleic acid binding R3H [Nitrosococcus oceani ATCC
19707]
gi|207089346|gb|EDZ66618.1| R3H domain protein [Nitrosococcus oceani AFC27]
Length = 496
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 135/199 (67%), Positives = 156/199 (78%), Gaps = 1/199 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
+ DL+ G ++L +GRPGVGKTT +REIARVL+DEF KRVVIVDTSNEIGGDGDIPH A
Sbjct: 113 FIQDLIERGDNLLLLGRPGVGKTTRLREIARVLADEFGKRVVIVDTSNEIGGDGDIPHPA 172
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG+ARRMQV P QH VMIEAVENHMPEVIIVDEIGT +EA A R+IAERGV LIGTAH
Sbjct: 173 IGSARRMQVSHPEQQHGVMIEAVENHMPEVIIVDEIGTTSEATAARTIAERGVQLIGTAH 232
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN++ NP L+DL+GGV VTLGD+EAR RR QK+I ERKA PTF ++E+ R
Sbjct: 233 GNTLENLVMNPTLADLVGGVQAVTLGDDEARLRRTQKTIRERKALPTFDAVVEIVNREVM 292
Query: 181 VTHK-TEKSVDMLLRGKTP 198
+ H T +VD LLRG P
Sbjct: 293 IVHPDTAGAVDKLLRGLGP 311
>gi|224109840|ref|XP_002315329.1| predicted protein [Populus trichocarpa]
gi|222864369|gb|EEF01500.1| predicted protein [Populus trichocarpa]
Length = 542
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 132/207 (63%), Positives = 165/207 (79%), Gaps = 1/207 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G SIL +GRPGVGKTT++REIAR+L+D+ +KRVVIVDTSNEIGGDGD+PH+
Sbjct: 206 IIRDLVEGGSSILVIGRPGVGKTTLIREIARMLADDQRKRVVIVDTSNEIGGDGDVPHAG 265
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVP ++QH +MIEAVENHMPE II+DEIGTE EA A +IA+RGV L+GTAH
Sbjct: 266 IGRARRMQVPNVNMQHNIMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVGTAH 325
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRER-HY 179
G ++NIIKNP L L+GG+++VTLGDEEAR R+ QK+ILERK PPTF +EM R
Sbjct: 326 GMTIDNIIKNPSLQILVGGIESVTLGDEEARKRKVQKTILERKGPPTFTCAVEMITRTEC 385
Query: 180 WVTHKTEKSVDMLLRGKTPLVEIRKRD 206
V H+ + +VD +L GK+PL EIR D
Sbjct: 386 RVHHRLDATVDAILAGKSPLFEIRHVD 412
>gi|320159578|ref|YP_004172802.1| hypothetical protein ANT_01680 [Anaerolinea thermophila UNI-1]
gi|319993431|dbj|BAJ62202.1| hypothetical protein ANT_01680 [Anaerolinea thermophila UNI-1]
Length = 538
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 134/216 (62%), Positives = 168/216 (77%), Gaps = 3/216 (1%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ GKS+L +GRPG+GKTT++RE AR+L++ +KRVVIVDTSNEIGGDGD+PH A
Sbjct: 118 IIQDLIESGKSVLILGRPGIGKTTMLREAARILAE--KKRVVIVDTSNEIGGDGDVPHPA 175
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
+G ARRMQVP+PSLQH+VMIEAVENH PEVI++DEIG E EA A R+IAERGV LIGTAH
Sbjct: 176 VGAARRMQVPKPSLQHEVMIEAVENHNPEVIVIDEIGRELEAAAARTIAERGVQLIGTAH 235
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN++ NP LSDL+GG++ VTL DEEAR R QK++LER+APPTF LIE++ER
Sbjct: 236 GRTLENLLLNPTLSDLVGGIEAVTLSDEEARRRGTQKTVLERRAPPTFDVLIEIQERDRL 295
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 215
H +VD L+R EIR RD N+ V++
Sbjct: 296 AIHPDVAAAVDALVRNNPLPPEIRYRDAEGNIHVEK 331
>gi|168013314|ref|XP_001759346.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689659|gb|EDQ76030.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 546
Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 137/220 (62%), Positives = 166/220 (75%), Gaps = 1/220 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
MV DL+ S+L +G PGVGKTT +REIAR+L+DE+ KRVVIVDTSNEI GDGDIPH+
Sbjct: 80 MVRDLIASSSSLLLMGPPGVGKTTAIREIARMLADEYHKRVVIVDTSNEIAGDGDIPHAG 139
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVP+ LQHKVMIEAVENHMP+VI++DEIGTE EA A +IA+RGV L+GTAH
Sbjct: 140 IGMARRMQVPKVDLQHKVMIEAVENHMPQVIVIDEIGTELEAVAAGTIAQRGVQLVGTAH 199
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+IKNP L +L GG+ +VTLGDEEAR RR QKS+LER+ PP F EM R W
Sbjct: 200 GMTVENLIKNPSLQNLAGGIQSVTLGDEEARRRRVQKSVLERQGPPVFTSACEMISRTEW 259
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTY 219
H++ +VD LL GK+P VE+RK ++ VVV Y
Sbjct: 260 RVHRSLAATVDALLAGKSPRVEVRKMNENGQVVVGNLAEY 299
>gi|163847787|ref|YP_001635831.1| single-stranded nucleic acid binding R3H domain-containing protein
[Chloroflexus aurantiacus J-10-fl]
gi|222525655|ref|YP_002570126.1| single-stranded nucleic acid binding R3H domain-containing protein
[Chloroflexus sp. Y-400-fl]
gi|163669076|gb|ABY35442.1| single-stranded nucleic acid binding R3H domain protein
[Chloroflexus aurantiacus J-10-fl]
gi|222449534|gb|ACM53800.1| single-stranded nucleic acid binding R3H domain protein
[Chloroflexus sp. Y-400-fl]
Length = 539
Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 132/207 (63%), Positives = 159/207 (76%), Gaps = 1/207 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G+SIL +G+PG GKTT++RE ARVL DE +KRVVIVDTSNEI GDGDIPH
Sbjct: 118 IIRDLVETGQSILLLGKPGTGKTTLLRETARVLGDELRKRVVIVDTSNEIAGDGDIPHPG 177
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVP P+ QH VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAH
Sbjct: 178 IGRARRMQVPRPAEQHNVMIEAVENHMPEVIVIDEIGTELEAAAARTIAERGVQLVGTAH 237
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRE-RHY 179
G L+N++ NP LSDL+GG+ VTLGDEEAR R QK++LERKAPPTF L+E++
Sbjct: 238 GNTLDNLMVNPTLSDLVGGIQAVTLGDEEARRRGTQKTVLERKAPPTFSILVEIQSWDRV 297
Query: 180 WVTHKTEKSVDMLLRGKTPLVEIRKRD 206
V +VD +LRG+ P E R RD
Sbjct: 298 MVYPDVAAAVDAILRGEDPPCEQRFRD 324
>gi|188584674|ref|YP_001916219.1| ATPase AAA [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179349361|gb|ACB83631.1| AAA ATPase [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 445
Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 137/228 (60%), Positives = 166/228 (72%), Gaps = 8/228 (3%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ D++ G L +GRPGVGKTT++RE AR+L+DEF+KRV+IVDTSNEI GDGDIPH A
Sbjct: 116 IIRDIVERGDKTLLLGRPGVGKTTILREAARILADEFRKRVIIVDTSNEIAGDGDIPHPA 175
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P QH VMIEAVENHMPEVII+DEIGT EA A R+IAERGV LI TAH
Sbjct: 176 IGHARRMQVKTPDKQHDVMIEAVENHMPEVIIIDEIGTYQEAEAARTIAERGVQLIATAH 235
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN+I NP LS+LIGG+DTVTLGDEEA+ R QK++LERKAP TF ++E+ +R+
Sbjct: 236 GNTLENLILNPTLSELIGGIDTVTLGDEEAKRRNSQKTVLERKAPSTFDAVVEIFDRNTL 295
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRKRDD-------RFNVVVDRWKTYD 220
H EK VD +LRG P EIR R + + + + D W D
Sbjct: 296 KIHAPLEKVVDYILRGGAPRPEIRLRKNDGQHEIIQNSNITDEWNEMD 343
>gi|222636577|gb|EEE66709.1| hypothetical protein OsJ_23378 [Oryza sativa Japonica Group]
Length = 605
Score = 269 bits (687), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 133/207 (64%), Positives = 164/207 (79%), Gaps = 1/207 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ G SIL +G PGVGKTT++REIAR+L+DE +KRV+IVDTSNEIGGDGD+PHS
Sbjct: 98 MIRDLVVGGGSILVIGPPGVGKTTLIREIARILADEGKKRVIIVDTSNEIGGDGDVPHSG 157
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG +RRMQVP+ S+QH VMIEAVENHMPEVI++DEIGTE EA A +IA+RGV L+GTAH
Sbjct: 158 IGRSRRMQVPKVSMQHNVMIEAVENHMPEVIVIDEIGTELEAMAASTIAQRGVQLVGTAH 217
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEM-RERHY 179
G +E+IIKNP L L+GG+++VTLGDEEA+ R+ QK+ILERK PPTF +EM +
Sbjct: 218 GVTIESIIKNPCLQVLVGGIESVTLGDEEAKKRKVQKTILERKGPPTFSCAVEMISKTEC 277
Query: 180 WVTHKTEKSVDMLLRGKTPLVEIRKRD 206
V HK E +VD +L GK P E RK D
Sbjct: 278 RVHHKLEATVDAILAGKPPKFEARKMD 304
>gi|219849802|ref|YP_002464235.1| single-stranded nucleic acid binding R3H domain-containing protein
[Chloroflexus aggregans DSM 9485]
gi|219544061|gb|ACL25799.1| single-stranded nucleic acid binding R3H domain protein
[Chloroflexus aggregans DSM 9485]
Length = 540
Score = 269 bits (687), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 133/207 (64%), Positives = 159/207 (76%), Gaps = 1/207 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G+SIL +G+PG GKTT++RE ARVL DE +KRVVIVDTSNEI GDGDIPH
Sbjct: 118 IIRDLVETGQSILLLGKPGTGKTTLLRETARVLGDELRKRVVIVDTSNEIAGDGDIPHPG 177
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVP PS QH VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV LIGTAH
Sbjct: 178 IGRARRMQVPRPSEQHNVMIEAVENHMPEVIVIDEIGTELEAAAARTIAERGVQLIGTAH 237
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRE-RHY 179
G L+N++ NP LSDL+GG+ VTLGDEEAR R QK++LERKAPPTF L+E++
Sbjct: 238 GNTLDNLMINPTLSDLVGGIQAVTLGDEEARRRGTQKTVLERKAPPTFSILVEIQSWDSV 297
Query: 180 WVTHKTEKSVDMLLRGKTPLVEIRKRD 206
V +VD +LRG+ P E R R+
Sbjct: 298 TVYPDVAAAVDAILRGEEPPCEQRIRE 324
>gi|383761637|ref|YP_005440619.1| hypothetical protein CLDAP_06820 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381381905|dbj|BAL98721.1| hypothetical protein CLDAP_06820 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 542
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 136/223 (60%), Positives = 174/223 (78%), Gaps = 3/223 (1%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ D+++ +SIL +GRPGVGKTT++RE AR+ S+ KRVVIVDTSNEI GDGDIPH A
Sbjct: 118 IIKDIVNSDRSILLLGRPGVGKTTLLREAARLRSE--VKRVVIVDTSNEIAGDGDIPHPA 175
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG +RRMQVP+PSLQH++MIEAVENHMPEVII+DEIG E EA A R+IAERGV LIGTAH
Sbjct: 176 IGRSRRMQVPDPSLQHELMIEAVENHMPEVIIIDEIGREQEAIAARTIAERGVQLIGTAH 235
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRER-HY 179
G LEN++ NP LSDL+GG+++VTL DEEAR R QKS+LER+APPTF LIE+++R H
Sbjct: 236 GNSLENLLMNPTLSDLVGGIESVTLSDEEARRRGTQKSVLERRAPPTFDVLIEIKDRQHL 295
Query: 180 WVTHKTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTYDRH 222
+ H ++VD +LRG+ + E R D++ + V R +T H
Sbjct: 296 VIHHDVAQAVDAILRGRELIPEERFVDEQGVIHVRRLETTPEH 338
>gi|159475499|ref|XP_001695856.1| hypothetical protein CHLREDRAFT_118675 [Chlamydomonas reinhardtii]
gi|158275416|gb|EDP01193.1| predicted protein [Chlamydomonas reinhardtii]
Length = 551
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 132/206 (64%), Positives = 159/206 (77%), Gaps = 1/206 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
MV DL+ G SIL +GRPGVGKTT +RE++R+L+DE KRVVIVDTSNEIGGDGDIPHS
Sbjct: 110 MVRDLVLSGASILLLGRPGVGKTTAIREVSRMLADECTKRVVIVDTSNEIGGDGDIPHSG 169
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P QH+VMIEAVENHMP+VI++DEIGT E A R+IA+RGV L+ TAH
Sbjct: 170 IGRARRMQVAHPEAQHRVMIEAVENHMPQVIVIDEIGTSEECGAARTIAQRGVQLVATAH 229
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN+IKNP L+DL+GG+ +VTLGDEEA+ R QKSILER APPTF IEM ER W
Sbjct: 230 GNELENVIKNPQLADLVGGIQSVTLGDEEAKRRGVQKSILERAAPPTFDVCIEMLERTKW 289
Query: 181 VTH-KTEKSVDMLLRGKTPLVEIRKR 205
H ++VDM+L G ++R++
Sbjct: 290 RAHLDVGQAVDMVLAGGESGGQVREK 315
>gi|218199218|gb|EEC81645.1| hypothetical protein OsI_25180 [Oryza sativa Indica Group]
Length = 682
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 133/207 (64%), Positives = 164/207 (79%), Gaps = 1/207 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ G SIL +G PGVGKTT++REIAR+L+DE +KRV+IVDTSNEIGGDGD+PHS
Sbjct: 175 MIRDLVVGGGSILVIGPPGVGKTTLIREIARILADEGKKRVIIVDTSNEIGGDGDVPHSG 234
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG +RRMQVP+ S+QH VMIEAVENHMPEVI++DEIGTE EA A +IA+RGV L+GTAH
Sbjct: 235 IGRSRRMQVPKVSMQHNVMIEAVENHMPEVIVIDEIGTELEAMAASTIAQRGVQLVGTAH 294
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEM-RERHY 179
G +E+IIKNP L L+GG+++VTLGDEEA+ R+ QK+ILERK PPTF +EM +
Sbjct: 295 GVTIESIIKNPCLQVLVGGIESVTLGDEEAKKRKVQKTILERKGPPTFSCAVEMISKTEC 354
Query: 180 WVTHKTEKSVDMLLRGKTPLVEIRKRD 206
V HK E +VD +L GK P E RK D
Sbjct: 355 RVHHKLEATVDAILAGKPPKFEARKMD 381
>gi|358346746|ref|XP_003637426.1| ATPase-like protein, partial [Medicago truncatula]
gi|355503361|gb|AES84564.1| ATPase-like protein, partial [Medicago truncatula]
Length = 493
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 132/214 (61%), Positives = 167/214 (78%), Gaps = 1/214 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
+++DL+ G SIL +G PGVGKTT++RE AR+L+DEF KRVVIVDTSNEIGGDGD+PH+
Sbjct: 194 IIHDLVEGGGSILVIGPPGVGKTTLIRETARMLADEFLKRVVIVDTSNEIGGDGDVPHAG 253
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVP ++QH +MIEAVENHMPE II+DEIGTE EA A +IA+RGV L+GTAH
Sbjct: 254 IGRARRMQVPNVNMQHSIMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVGTAH 313
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEM-RERHY 179
G +E+I+KNP L L+GG+++VTLGDEEAR R+ QK+ILERK PPTF +EM +
Sbjct: 314 GTTIESIMKNPYLQILVGGIESVTLGDEEARKRKVQKTILERKGPPTFTCAVEMISKTEC 373
Query: 180 WVTHKTEKSVDMLLRGKTPLVEIRKRDDRFNVVV 213
V H+ + +VD LL GK P+ E+R DD N +V
Sbjct: 374 RVHHRLDATVDALLAGKPPVFEVRHWDDFSNDLV 407
>gi|242047690|ref|XP_002461591.1| hypothetical protein SORBIDRAFT_02g005070 [Sorghum bicolor]
gi|241924968|gb|EER98112.1| hypothetical protein SORBIDRAFT_02g005070 [Sorghum bicolor]
Length = 628
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 131/209 (62%), Positives = 165/209 (78%), Gaps = 1/209 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ G SIL +G PGVGKTT++REIAR+L+DE +KRV+IVDTSNEIGGDGD+PHS
Sbjct: 121 MIRDLVVGGGSILVIGPPGVGKTTLIREIARILADEGKKRVIIVDTSNEIGGDGDVPHSG 180
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVP+ ++QH VMIEAVENHMPEVI++DEIGTE EA A +IA+RGV L+GTAH
Sbjct: 181 IGRARRMQVPKVTMQHNVMIEAVENHMPEVIVIDEIGTELEAMAASTIAQRGVQLVGTAH 240
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEM-RERHY 179
G +E+IIKNP L L+GG+++VTLGDEEA+ R+ QK+ILERK PPTF +EM +
Sbjct: 241 GVTIESIIKNPCLQMLVGGIESVTLGDEEAKKRKVQKTILERKGPPTFSCAVEMISKTEC 300
Query: 180 WVTHKTEKSVDMLLRGKTPLVEIRKRDDR 208
V HK + +VD +L GK P E RK ++
Sbjct: 301 RVHHKLDATVDAILAGKPPKFEARKMHNK 329
>gi|255585357|ref|XP_002533375.1| ATP binding protein, putative [Ricinus communis]
gi|223526782|gb|EEF29006.1| ATP binding protein, putative [Ricinus communis]
Length = 693
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 132/207 (63%), Positives = 163/207 (78%), Gaps = 1/207 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G SIL +G PGVGKTT++REIAR+L+D+ KRVVIVDTSNEIGGDGD+PH+
Sbjct: 207 IIRDLVEGGGSILAIGPPGVGKTTLIREIARMLADDQGKRVVIVDTSNEIGGDGDVPHAG 266
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVP ++QH VMIEAVENHMP+ II+DEIGTE EA A +IA+RGV L+GTAH
Sbjct: 267 IGRARRMQVPNVNMQHNVMIEAVENHMPQAIIIDEIGTELEALAASTIAQRGVQLVGTAH 326
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRER-HY 179
G ++NIIKNP L L+GG+++VTLGDEEAR R+ QK+ILERK PPTF +EM R
Sbjct: 327 GMTIDNIIKNPSLQILVGGIESVTLGDEEARKRKVQKTILERKGPPTFTCAVEMISRTEC 386
Query: 180 WVTHKTEKSVDMLLRGKTPLVEIRKRD 206
V H+ + +VD +L GKTPL EIR D
Sbjct: 387 RVHHRLDATVDTILSGKTPLFEIRHMD 413
>gi|357168544|ref|XP_003581698.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein ycf45-like
[Brachypodium distachyon]
Length = 157
Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 128/156 (82%), Positives = 140/156 (89%)
Query: 29 IARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMP 88
+ARV++DEFQKR VIVDTSNEIGGDGDIPH+AIG ARRMQVPEPS+QH+VMIE VENHMP
Sbjct: 1 MARVVADEFQKRQVIVDTSNEIGGDGDIPHAAIGGARRMQVPEPSMQHRVMIEVVENHMP 60
Query: 89 EVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDE 148
EV+IVDEI TE EA ACRSI ERGVMLIGTAHGE L NIIKNP+LSDLIGGV TVTLGDE
Sbjct: 61 EVVIVDEIXTETEAQACRSIVERGVMLIGTAHGERLANIIKNPVLSDLIGGVKTVTLGDE 120
Query: 149 EARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK 184
EARAR +SILERKAPP F FL+E+RE HYWVTH+
Sbjct: 121 EARARHTLRSILERKAPPAFPFLVELRELHYWVTHR 156
>gi|308081617|ref|NP_001183219.1| uncharacterized protein LOC100501605 [Zea mays]
gi|238010124|gb|ACR36097.1| unknown [Zea mays]
Length = 587
Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 130/205 (63%), Positives = 163/205 (79%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ G SIL +G PGVGKTT++REIAR+L+DE +KRV+IVDTSNEIGGDGD+PHS
Sbjct: 80 MIRDLVVSGGSILVIGPPGVGKTTLIREIARILADEGKKRVIIVDTSNEIGGDGDVPHSG 139
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVP+ ++QH VMIEAVENHMPEVI++DEIGTE EA A +IA+RGV L+GTAH
Sbjct: 140 IGRARRMQVPKVTMQHNVMIEAVENHMPEVIVIDEIGTELEAMAATTIAQRGVQLVGTAH 199
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEM-RERHY 179
G +E+IIKNP L L+GG+++VTLGDEEA+ R+ QK+ILERK PPTF +EM +
Sbjct: 200 GVTIESIIKNPCLQMLVGGIESVTLGDEEAKKRKVQKTILERKGPPTFLCAVEMISKTEC 259
Query: 180 WVTHKTEKSVDMLLRGKTPLVEIRK 204
V H+ + +VD +L GK P E RK
Sbjct: 260 RVHHRLDATVDAILAGKPPKFEARK 284
>gi|452821468|gb|EME28498.1| [pt] hypothetical protein [Galdieria sulphuraria]
Length = 493
Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 135/229 (58%), Positives = 171/229 (74%), Gaps = 10/229 (4%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DLL G SIL +G+PGVGKTT +REIAR+L+DE KRV+I+DTSNEI GD DI H +
Sbjct: 80 IIRDLLEIGHSILILGKPGVGKTTAIREIARILADEIGKRVIIIDTSNEIAGDSDIGHFS 139
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P LQH+VMIEA+ENHMPEVII+DEI TE EA A R+IAERGV LIGTAH
Sbjct: 140 IGRARRMQVKHPQLQHQVMIEAIENHMPEVIIIDEISTELEAIAARTIAERGVQLIGTAH 199
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN+I+N LSDLIGG+ VTLGDEEAR R QKSILERK+ PTF +IE+ + + W
Sbjct: 200 GNSLENLIRNFTLSDLIGGIQYVTLGDEEARKRGTQKSILERKSFPTFNIVIEIHQLYSW 259
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDDRF----NVVVDRWKTYDRHDI 224
H+ E++VD +L+G P+++ DRF N + ++ Y+ ++I
Sbjct: 260 RIHQDVEQNVDRILQGSRPILQ-----DRFISLDNKHIIKYSQYNNNEI 303
>gi|300115498|ref|YP_003762073.1| single-stranded nucleic acid-binding R3H domain-containing protein
[Nitrosococcus watsonii C-113]
gi|299541435|gb|ADJ29752.1| single-stranded nucleic acid binding R3H domain protein
[Nitrosococcus watsonii C-113]
Length = 496
Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 134/199 (67%), Positives = 155/199 (77%), Gaps = 1/199 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
+ DL+ ++L +GRPGVGKTT +REIARVL+DEF KRVVIVDTSNEIGGDGDIPH A
Sbjct: 113 FIQDLIEREVNLLLLGRPGVGKTTRLREIARVLADEFGKRVVIVDTSNEIGGDGDIPHPA 172
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG+ARRMQV P QH VMIEAVENHMPEVI+VDEIGT +EA A R+IAERGV LIGTAH
Sbjct: 173 IGSARRMQVAHPEQQHGVMIEAVENHMPEVIVVDEIGTTSEAMAARTIAERGVQLIGTAH 232
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN++ NP L+DLIGGV VTLGD+EAR RR QK+I ERKA PTF ++E+ R
Sbjct: 233 GNTLENLVMNPTLADLIGGVQVVTLGDDEARLRRTQKTIRERKALPTFNAVVEIVNREIM 292
Query: 181 VTHK-TEKSVDMLLRGKTP 198
+ H T +VD LLRG P
Sbjct: 293 MVHPDTASAVDKLLRGLDP 311
>gi|414591924|tpg|DAA42495.1| TPA: hypothetical protein ZEAMMB73_459348 [Zea mays]
Length = 696
Score = 266 bits (679), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 130/205 (63%), Positives = 163/205 (79%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ G SIL +G PGVGKTT++REIAR+L+DE +KRV+IVDTSNEIGGDGD+PHS
Sbjct: 189 MIRDLVVSGGSILVIGPPGVGKTTLIREIARILADEGKKRVIIVDTSNEIGGDGDVPHSG 248
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVP+ ++QH VMIEAVENHMPEVI++DEIGTE EA A +IA+RGV L+GTAH
Sbjct: 249 IGRARRMQVPKVTMQHNVMIEAVENHMPEVIVIDEIGTELEAMAATTIAQRGVQLVGTAH 308
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEM-RERHY 179
G +E+IIKNP L L+GG+++VTLGDEEA+ R+ QK+ILERK PPTF +EM +
Sbjct: 309 GVTIESIIKNPCLQMLVGGIESVTLGDEEAKKRKVQKTILERKGPPTFLCAVEMISKTEC 368
Query: 180 WVTHKTEKSVDMLLRGKTPLVEIRK 204
V H+ + +VD +L GK P E RK
Sbjct: 369 RVHHRLDATVDAILAGKPPKFEARK 393
>gi|357111296|ref|XP_003557450.1| PREDICTED: uncharacterized protein ycf45-like [Brachypodium
distachyon]
Length = 707
Score = 265 bits (678), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 131/209 (62%), Positives = 164/209 (78%), Gaps = 1/209 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ G SIL +G PGVGKTT++REIAR+L+DE +KRV+IVDTSNEIGGDGD+PHS
Sbjct: 198 MIRDLVVGGGSILVIGPPGVGKTTLIREIARILADEGKKRVIIVDTSNEIGGDGDVPHSG 257
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG +RRMQVP+ ++QH VMIEAVENHMPEVI++DEIGTE EA A +IA+RGV L+GTAH
Sbjct: 258 IGRSRRMQVPKVTMQHNVMIEAVENHMPEVIVIDEIGTELEALAASTIAQRGVQLVGTAH 317
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRER-HY 179
G +E+IIKNP L L+GG+++VTLGDEEA+ R+ QK+ILERK PPTF +EM +
Sbjct: 318 GVTIESIIKNPCLQMLVGGIESVTLGDEEAKKRKVQKTILERKGPPTFSCAVEMVSKTEC 377
Query: 180 WVTHKTEKSVDMLLRGKTPLVEIRKRDDR 208
V HK E +VD +L GK P E R D +
Sbjct: 378 RVHHKLETTVDAILAGKPPKFEARVMDSK 406
>gi|330850845|ref|YP_004376595.1| hypothetical protein FispC_p030 [Fistulifera sp. JPCC DA0580]
gi|328835665|dbj|BAK18961.1| conserved hypothetical protein [Fistulifera sp. JPCC DA0580]
Length = 456
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/215 (61%), Positives = 163/215 (75%), Gaps = 1/215 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DLL GKSIL +G+PGVGKTT++REIARVL DE +KRV+I+DTSNEI GD DIPHS
Sbjct: 115 IIRDLLESGKSILILGKPGVGKTTIIREIARVLGDEMEKRVIIIDTSNEIAGDSDIPHSG 174
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV + LQH+VMIEAVENHMP+VII+DEIGTE E A R+IAE+GV L+GT H
Sbjct: 175 IGRARRMQVAKTELQHQVMIEAVENHMPQVIIIDEIGTELEVLAARTIAEKGVQLVGTTH 234
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN+IKNP L+DLIGG+ VTL DEEA+ R QKSILERKA P F +IE+ ++ W
Sbjct: 235 GNCLENLIKNPPLADLIGGIQYVTLSDEEAKRRGTQKSILERKAYPAFEIIIEINDQTSW 294
Query: 181 VTHKTEK-SVDMLLRGKTPLVEIRKRDDRFNVVVD 214
H+ K SVD LRG + +IR+ V+++
Sbjct: 295 TIHEDVKDSVDSFLRGSFLVGQIRQLSLNEKVIIN 329
>gi|11467491|ref|NP_043637.1| ORF455 [Odontella sinensis]
gi|1351772|sp|P49540.1|YCF45_ODOSI RecName: Full=Uncharacterized protein ycf45; AltName: Full=ORF455
gi|1185186|emb|CAA91669.1| ORF455, homologous to Porphyra ORF565 [Odontella sinensis]
Length = 455
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 129/204 (63%), Positives = 158/204 (77%), Gaps = 1/204 (0%)
Query: 2 VYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAI 61
V DLL +SIL +G+PGVGKTT++REIARVLSDE +KRVVIVDTSNEI GD DIPHSAI
Sbjct: 116 VRDLLESQQSILLLGKPGVGKTTIIREIARVLSDEMEKRVVIVDTSNEIAGDSDIPHSAI 175
Query: 62 GTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 121
G ARRMQV LQH++MIEAVENHMP+VI++DEIGTE EA A R+IAE+GV L+GT HG
Sbjct: 176 GRARRMQVATTDLQHQIMIEAVENHMPQVIVIDEIGTELEALAARTIAEKGVQLVGTTHG 235
Query: 122 EWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWV 181
LEN+IKNP LSDLIGG+ +VTL D+EA+ R QKSI+ERKA P F IE+ + W
Sbjct: 236 NCLENLIKNPPLSDLIGGIQSVTLSDDEAKRRGTQKSIIERKAYPAFQIAIEINTENSWT 295
Query: 182 THK-TEKSVDMLLRGKTPLVEIRK 204
H+ + S+D+LLR ++R+
Sbjct: 296 IHEDIKSSIDLLLRKSFTGTQVRE 319
>gi|255090003|ref|XP_002506923.1| predicted protein [Micromonas sp. RCC299]
gi|226522196|gb|ACO68181.1| predicted protein [Micromonas sp. RCC299]
Length = 624
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 128/207 (61%), Positives = 161/207 (77%), Gaps = 1/207 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
+V DLL G S+L +GRPGVGKTT +REI+R+LS+E+ +RVV+VDTSNEIGGDGDIPH
Sbjct: 140 LVRDLLASGASVLLLGRPGVGKTTAIREISRILSEEYGRRVVVVDTSNEIGGDGDIPHPG 199
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG +RRMQVP P QH V+IEAV+NH P+V+IVDEIGTE EA A R+I++RGV +I TAH
Sbjct: 200 IGGSRRMQVPVPDRQHDVLIEAVQNHTPQVVIVDEIGTELEAKAARTISQRGVQMIATAH 259
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN++KNP+L+DL+GGV +VTLGD+EAR RR QKS+LER+ PPTF +EM + +W
Sbjct: 260 GHTLENLLKNPLLNDLVGGVVSVTLGDDEARRRRVQKSVLEREGPPTFGAAVEMVDIGHW 319
Query: 181 VTH-KTEKSVDMLLRGKTPLVEIRKRD 206
H +VD LL G P VE+R D
Sbjct: 320 RVHLDVGVAVDTLLAGYAPHVELRTLD 346
>gi|297829570|ref|XP_002882667.1| hypothetical protein ARALYDRAFT_897221 [Arabidopsis lyrata subsp.
lyrata]
gi|297328507|gb|EFH58926.1| hypothetical protein ARALYDRAFT_897221 [Arabidopsis lyrata subsp.
lyrata]
Length = 688
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 132/205 (64%), Positives = 161/205 (78%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G SIL +G PGVGKTT++REIAR+L+DE +KRVVIVDTSNEIGGDGD+PHS
Sbjct: 209 IIRDLIEGGGSILVIGSPGVGKTTLIREIARMLADEHRKRVVIVDTSNEIGGDGDVPHSG 268
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVP +LQH VMIEAVENHMPE II+DEIGTE EA A +IA+RGV L+ TAH
Sbjct: 269 IGRARRMQVPNVNLQHDVMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVATAH 328
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G ++NIIKNP L LIGG+++VTLGDEEAR R+ QK+ILERK PPTF +EM R
Sbjct: 329 GMTIDNIIKNPSLQILIGGIESVTLGDEEARKRKVQKTILERKGPPTFTCAVEMISRTEC 388
Query: 181 VTH-KTEKSVDMLLRGKTPLVEIRK 204
H + + +VD +L GK+ L EIR+
Sbjct: 389 RVHQRLDVTVDAILAGKSALFEIRQ 413
>gi|378824540|ref|YP_005089710.1| ycf45 gene product (chloroplast) [Synedra acus]
gi|371572739|gb|AEX37835.1| hypothetical protein (chloroplast) [Synedra acus]
Length = 448
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 125/204 (61%), Positives = 163/204 (79%), Gaps = 1/204 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DLL G+SIL +G+PGVGKTT++REI RVL+DE +KRVV++DTSNEI G+ DIPHS
Sbjct: 113 VIRDLLESGQSILILGKPGVGKTTIIREIGRVLADEMEKRVVVIDTSNEIAGESDIPHSG 172
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV + LQH+VMIEAVENHMP+VII+DEIGTE E A R+IAE+GV L+GT H
Sbjct: 173 IGRARRMQVAKTELQHQVMIEAVENHMPQVIIIDEIGTELEVLAARTIAEKGVQLVGTTH 232
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G L+N+IKNP L+DLIGG+ VTL D+EA+ R+ QK++LERKA P F LIE+ +++ W
Sbjct: 233 GNCLQNLIKNPPLADLIGGIQYVTLSDDEAKRRKTQKTVLERKAYPAFEILIEINQQNSW 292
Query: 181 VTHKTEK-SVDMLLRGKTPLVEIR 203
H+ K S+D+LLRG + + +IR
Sbjct: 293 TIHEDVKTSIDLLLRGDSFMEQIR 316
>gi|449465306|ref|XP_004150369.1| PREDICTED: uncharacterized protein ycf45-like [Cucumis sativus]
gi|449513026|ref|XP_004164207.1| PREDICTED: uncharacterized protein ycf45-like [Cucumis sativus]
Length = 733
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 130/211 (61%), Positives = 164/211 (77%), Gaps = 1/211 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G SIL +G PGVGKTT++REIAR+L+D+ +KRVVIVDTSNEIGGDGD+PH+
Sbjct: 219 IIRDLVEGGGSILVIGPPGVGKTTLIREIARMLADDHKKRVVIVDTSNEIGGDGDVPHAG 278
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG+ARRMQVP ++QH VMIEAVENHMPE II+DEIGTE EA A +IA+RGV L+GTAH
Sbjct: 279 IGSARRMQVPNVNMQHTVMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVGTAH 338
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEM-RERHY 179
G ++NIIKNP L L+GG+++VTLGDEEAR R+ QK+ILERK P TF +EM +
Sbjct: 339 GITIDNIIKNPSLQILVGGIESVTLGDEEARKRKVQKTILERKGPSTFTCAVEMISKTEC 398
Query: 180 WVTHKTEKSVDMLLRGKTPLVEIRKRDDRFN 210
V H+ + +VD +L GK PL E+R D N
Sbjct: 399 RVHHRLDTTVDAILAGKPPLFEVRHVDTYAN 429
>gi|116748317|ref|YP_845004.1| single-stranded nucleic acid binding R3H domain-containing protein
[Syntrophobacter fumaroxidans MPOB]
gi|116697381|gb|ABK16569.1| single-stranded nucleic acid binding R3H domain protein
[Syntrophobacter fumaroxidans MPOB]
Length = 515
Score = 263 bits (671), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 135/214 (63%), Positives = 161/214 (75%), Gaps = 3/214 (1%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
+V D++ G S+L +GRPGVGKTT++RE ARVL+D+F KRV+IVDTSNEIGGDGDIPH
Sbjct: 120 IVRDVVESGHSLLLLGRPGVGKTTLLREAARVLADDFGKRVIIVDTSNEIGGDGDIPHPG 179
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVP P QH VMIEAVENHMPEVI++DEIGTEAEA A R+IAERGV LI T H
Sbjct: 180 IGRARRMQVPTPGNQHGVMIEAVENHMPEVIVIDEIGTEAEALAARTIAERGVQLIATVH 239
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN+++NP LSDL+GG+ +VTL DEEAR R QK++LERK PPTF +IE++E+
Sbjct: 240 GNTLENLLQNPSLSDLVGGLQSVTLSDEEARRRGTQKTVLERKLPPTFNVVIEIQEKDRL 299
Query: 181 VTHKTEKSV-DMLLRG--KTPLVEIRKRDDRFNV 211
H SV D LRG +P V IR D V
Sbjct: 300 AVHHDVASVIDYSLRGFPFSPEVRIRTGDGSVEV 333
>gi|118411037|ref|YP_874432.1| hypothetical protein PhtrCp075 [Phaeodactylum tricornutum]
gi|116739784|gb|ABK20655.1| conserved hypothetical protein [Phaeodactylum tricornutum]
Length = 454
Score = 263 bits (671), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 128/204 (62%), Positives = 158/204 (77%), Gaps = 1/204 (0%)
Query: 2 VYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAI 61
+ DLL KSIL +G+PGVGKTT++REIARVL+DE +KRV+I+DTSNEI GD DIPHS I
Sbjct: 116 IRDLLESEKSILILGKPGVGKTTIIREIARVLADEMEKRVIIIDTSNEIAGDSDIPHSGI 175
Query: 62 GTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 121
G ARRMQV + LQH+VMIEAVENHMP+VII+DEIGTE E A R+IAE+GV L+GT HG
Sbjct: 176 GRARRMQVAKTELQHQVMIEAVENHMPQVIIIDEIGTELEVLAARTIAEKGVQLVGTTHG 235
Query: 122 EWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWV 181
L+N+IKNP L+DLIGG+ VTL D+EA+ R QKSILERKA P F +IE+ + W
Sbjct: 236 NCLDNLIKNPSLADLIGGIQYVTLSDDEAKRRGTQKSILERKAYPAFEIIIEINNQSSWT 295
Query: 182 THKTEK-SVDMLLRGKTPLVEIRK 204
H+ K SVD+ LRG + +IR+
Sbjct: 296 IHEDVKTSVDLFLRGSFFVGQIRQ 319
>gi|15810179|gb|AAL06991.1| AT3g10420/F13M14_30 [Arabidopsis thaliana]
gi|28416489|gb|AAO42775.1| At3g10420/F13M14_30 [Arabidopsis thaliana]
Length = 559
Score = 262 bits (669), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 131/205 (63%), Positives = 160/205 (78%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G SIL +G PGVGKTT++REIAR+L+DE +KRVVIVDTSNEIGGDGD+PHS
Sbjct: 80 IIRDLIEGGGSILVIGSPGVGKTTLIREIARMLADEHRKRVVIVDTSNEIGGDGDVPHSG 139
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVP +LQH VMIEAVENHMPE II+DEIGTE EA A +IA+RGV L+ TAH
Sbjct: 140 IGRARRMQVPNVNLQHDVMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVATAH 199
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G ++NIIKNP L LIGG+++VTLGDEEAR R+ QK+ILERK PPTF +EM R
Sbjct: 200 GMTIDNIIKNPSLQILIGGIESVTLGDEEARKRKVQKTILERKGPPTFTCAVEMISRTEC 259
Query: 181 VTH-KTEKSVDMLLRGKTPLVEIRK 204
H + + +VD +L GK+ EIR+
Sbjct: 260 RVHQRLDVTVDAILAGKSAPFEIRQ 284
>gi|30681308|ref|NP_566373.2| P-loop containing nucleoside triphosphate hydrolase family protein
[Arabidopsis thaliana]
gi|332641382|gb|AEE74903.1| P-loop containing nucleoside triphosphate hydrolase family protein
[Arabidopsis thaliana]
Length = 684
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 131/205 (63%), Positives = 160/205 (78%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G SIL +G PGVGKTT++REIAR+L+DE +KRVVIVDTSNEIGGDGD+PHS
Sbjct: 205 IIRDLIEGGGSILVIGSPGVGKTTLIREIARMLADEHRKRVVIVDTSNEIGGDGDVPHSG 264
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVP +LQH VMIEAVENHMPE II+DEIGTE EA A +IA+RGV L+ TAH
Sbjct: 265 IGRARRMQVPNVNLQHDVMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVATAH 324
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G ++NIIKNP L LIGG+++VTLGDEEAR R+ QK+ILERK PPTF +EM R
Sbjct: 325 GMTIDNIIKNPSLQILIGGIESVTLGDEEARKRKVQKTILERKGPPTFTCAVEMISRTEC 384
Query: 181 VTH-KTEKSVDMLLRGKTPLVEIRK 204
H + + +VD +L GK+ EIR+
Sbjct: 385 RVHQRLDVTVDAILAGKSAPFEIRQ 409
>gi|326513988|dbj|BAJ92144.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326523339|dbj|BAJ88710.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 704
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 128/209 (61%), Positives = 162/209 (77%), Gaps = 1/209 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ G SIL +G PGVGKTT++REIAR+L+DE KRV+IVDTSNEIGGDGD+PHS
Sbjct: 196 MIRDLVVGGGSILVIGPPGVGKTTLIREIARILADEGNKRVIIVDTSNEIGGDGDVPHSG 255
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG +RRMQVP+ ++QH VMIEAVENHMPEVI++DEIGTE EA A +IA+RGV L+GTAH
Sbjct: 256 IGRSRRMQVPKVTMQHNVMIEAVENHMPEVIVIDEIGTELEAMAASTIAQRGVQLVGTAH 315
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +++IIKNP L L+GG+++VTLGDEEA+ R+ QK+ILERK PPTF +EM +
Sbjct: 316 GVTIDSIIKNPCLQMLVGGIESVTLGDEEAKKRKVQKTILERKGPPTFSCAVEMVSKTEC 375
Query: 181 VTH-KTEKSVDMLLRGKTPLVEIRKRDDR 208
H K E +VD +L GK P E R + +
Sbjct: 376 RVHYKLESTVDAILAGKPPKFEARMMNSK 404
>gi|33146924|dbj|BAC79945.1| ATPase-like protein [Oryza sativa Japonica Group]
gi|50509453|dbj|BAD31071.1| ATPase-like protein [Oryza sativa Japonica Group]
Length = 707
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 133/215 (61%), Positives = 164/215 (76%), Gaps = 9/215 (4%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVM--------REIARVLSDEFQKRVVIVDTSNEIGG 52
M+ DL+ G SIL +G PGVGKTT++ REIAR+L+DE +KRV+IVDTSNEIGG
Sbjct: 192 MIRDLVVGGGSILVIGPPGVGKTTLISLRCFQQYREIARILADEGKKRVIIVDTSNEIGG 251
Query: 53 DGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERG 112
DGD+PHS IG +RRMQVP+ S+QH VMIEAVENHMPEVI++DEIGTE EA A +IA+RG
Sbjct: 252 DGDVPHSGIGRSRRMQVPKVSMQHNVMIEAVENHMPEVIVIDEIGTELEAMAASTIAQRG 311
Query: 113 VMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLI 172
V L+GTAHG +E+IIKNP L L+GG+++VTLGDEEA+ R+ QK+ILERK PPTF +
Sbjct: 312 VQLVGTAHGVTIESIIKNPCLQVLVGGIESVTLGDEEAKKRKVQKTILERKGPPTFSCAV 371
Query: 173 EM-RERHYWVTHKTEKSVDMLLRGKTPLVEIRKRD 206
EM + V HK E +VD +L GK P E RK D
Sbjct: 372 EMISKTECRVHHKLEATVDAILAGKPPKFEARKMD 406
>gi|298246463|ref|ZP_06970269.1| single-stranded nucleic acid binding R3H domain protein
[Ktedonobacter racemifer DSM 44963]
gi|297553944|gb|EFH87809.1| single-stranded nucleic acid binding R3H domain protein
[Ktedonobacter racemifer DSM 44963]
Length = 607
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 130/208 (62%), Positives = 158/208 (75%), Gaps = 1/208 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ D++ G+SIL +GRPGVGKTT++REIARVL+DE KRVV+VDTSNEI GDGDIPH
Sbjct: 117 LIRDIVEQGQSILILGRPGVGKTTLLREIARVLADEANKRVVVVDTSNEIAGDGDIPHPG 176
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV QH VMIEAVENHMP+VI++DEIGTE EA A R+IAERGV L+ TAH
Sbjct: 177 IGRARRMQVARTVEQHAVMIEAVENHMPQVIVIDEIGTELEAAAARTIAERGVQLVATAH 236
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G L N++ NP LSDL+GG+ TVTLGDEEAR R QKSILERKAPPTF ++E +
Sbjct: 237 GNTLGNLLMNPTLSDLVGGIQTVTLGDEEARRRHTQKSILERKAPPTFDVVVEQQSWEEV 296
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDD 207
+ H+ +VD +LRG + E R RD+
Sbjct: 297 IVHRDVADTVDTMLRGMIIVAEERTRDE 324
>gi|374851690|dbj|BAL54642.1| single-stranded nucleic acid binding R3H [uncultured Chloroflexi
bacterium]
Length = 517
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 132/214 (61%), Positives = 164/214 (76%), Gaps = 5/214 (2%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ D++ GKSIL +GRPGVGKTT++RE AR+L++ +RV+IVDTSNEIGGDGD+PH A
Sbjct: 118 IIEDIITSGKSILLLGRPGVGKTTLLREAARILAE--TRRVIIVDTSNEIGGDGDVPHPA 175
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV EP LQH+VMIEAVENH PEVI++DEIG E EA A R+IAERGV LIGTAH
Sbjct: 176 IGKARRMQVREPMLQHEVMIEAVENHNPEVIVIDEIGRELEAAAARTIAERGVQLIGTAH 235
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN++ NP LSDL+GG++ VTL DEEAR R QK++LER+APPTF LIE++ R
Sbjct: 236 GNTLENLLLNPTLSDLVGGIEAVTLSDEEARRRGTQKTVLERRAPPTFDVLIEIQNRDRL 295
Query: 181 VTH-KTEKSVDMLLRGK--TPLVEIRKRDDRFNV 211
H +VD LLRG+ P + IR+ D R +
Sbjct: 296 AIHMDVATAVDALLRGRPIPPEIRIREPDGRIRI 329
>gi|315320527|ref|YP_004072583.1| putative Ycf45 [Thalassiosira oceanica CCMP1005]
gi|283569000|gb|ADB27537.1| putative Ycf45 [Thalassiosira oceanica CCMP1005]
Length = 452
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 167/220 (75%), Gaps = 3/220 (1%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DLL KSIL +G+PGVGKTT++REIAR+LSDE +KRV+I+DTSNEI GD D+PH+
Sbjct: 115 IIRDLLESRKSILILGKPGVGKTTIIREIARILSDEMEKRVIIIDTSNEIAGDSDVPHNG 174
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV + LQHK+M+EA+ENHMP+VI++DEIGTE EA A R+IAE+GV L+GT H
Sbjct: 175 IGRARRMQVAKTELQHKIMLEAIENHMPQVIVIDEIGTELEALAARTIAEKGVQLVGTTH 234
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN+IKNP LSDL+GG+ VT+ DEEA+ R QKSILERK+ P F +E+ + W
Sbjct: 235 GNCLENLIKNPSLSDLVGGIQYVTISDEEAKRRGTQKSILERKSYPAFQLAVEVNNVYSW 294
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIR--KRDDRFNVVVDRWK 217
H+ E SVD++LR +++ R K++++ ++ + +
Sbjct: 295 TIHENVENSVDLILRDNFTILQTRSIKKNEKLSITYKKLQ 334
>gi|30681303|ref|NP_850553.1| P-loop containing nucleoside triphosphate hydrolase family protein
[Arabidopsis thaliana]
gi|12322790|gb|AAG51387.1|AC011560_19 unknown protein; 108050-105786 [Arabidopsis thaliana]
gi|332641383|gb|AEE74904.1| P-loop containing nucleoside triphosphate hydrolase family protein
[Arabidopsis thaliana]
Length = 547
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 131/205 (63%), Positives = 160/205 (78%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G SIL +G PGVGKTT++REIAR+L+DE +KRVVIVDTSNEIGGDGD+PHS
Sbjct: 205 IIRDLIEGGGSILVIGSPGVGKTTLIREIARMLADEHRKRVVIVDTSNEIGGDGDVPHSG 264
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVP +LQH VMIEAVENHMPE II+DEIGTE EA A +IA+RGV L+ TAH
Sbjct: 265 IGRARRMQVPNVNLQHDVMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVATAH 324
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G ++NIIKNP L LIGG+++VTLGDEEAR R+ QK+ILERK PPTF +EM R
Sbjct: 325 GMTIDNIIKNPSLQILIGGIESVTLGDEEARKRKVQKTILERKGPPTFTCAVEMISRTEC 384
Query: 181 VTH-KTEKSVDMLLRGKTPLVEIRK 204
H + + +VD +L GK+ EIR+
Sbjct: 385 RVHQRLDVTVDAILAGKSAPFEIRQ 409
>gi|302807180|ref|XP_002985303.1| hypothetical protein SELMODRAFT_181570 [Selaginella moellendorffii]
gi|300147131|gb|EFJ13797.1| hypothetical protein SELMODRAFT_181570 [Selaginella moellendorffii]
Length = 563
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 125/209 (59%), Positives = 155/209 (74%), Gaps = 1/209 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M DL+ G S+L +G PGVGKTT +RE+AR+L+D++ +RVVIVDTSNEI GDGDIPH
Sbjct: 116 MARDLVSSGASLLLMGPPGVGKTTAIREVARMLADDYDRRVVIVDTSNEIAGDGDIPHPG 175
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV LQHK+MIEAVENHMPE I++DEIGTE EA A +IA+RGV L+ TAH
Sbjct: 176 IGRARRMQVTNVGLQHKIMIEAVENHMPETIVIDEIGTELEAAAAVTIAQRGVQLVATAH 235
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+IKNP L L+GG+ +VTLGD+EAR R QKS+LERK PP F IEM R W
Sbjct: 236 GTSVENLIKNPSLEILVGGIQSVTLGDDEARRRGVQKSVLERKGPPAFSTAIEMASRTEW 295
Query: 181 -VTHKTEKSVDMLLRGKTPLVEIRKRDDR 208
+ H ++D LL G++P +EIR D+
Sbjct: 296 RIHHSLTATIDALLAGRSPSIEIRNMKDK 324
>gi|302848609|ref|XP_002955836.1| hypothetical protein VOLCADRAFT_66371 [Volvox carteri f.
nagariensis]
gi|300258804|gb|EFJ43037.1| hypothetical protein VOLCADRAFT_66371 [Volvox carteri f.
nagariensis]
Length = 363
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 124/196 (63%), Positives = 154/196 (78%), Gaps = 1/196 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
+V DL+ G+SIL +GRPGVGKTT +RE+ R+ +DE ++RVV+VDTSNEIGGDGD+PH +
Sbjct: 156 LVRDLVLAGRSILLLGRPGVGKTTALREVCRIAADESRRRVVVVDTSNEIGGDGDVPHPS 215
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG+ARRMQVP P QH VM+EAVENHMP+VI++DEI T AE A R+IA+RGV L+GTAH
Sbjct: 216 IGSARRMQVPRPEAQHDVMVEAVENHMPQVIVIDEISTLAECTAARTIAQRGVQLVGTAH 275
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN+IKNP L+DL+GG+ +VTLGDEEAR R QKSILER APPTF +E+ ER W
Sbjct: 276 GGRLENVIKNPSLADLVGGIQSVTLGDEEARRRGVQKSILERAAPPTFDVAVELEERGRW 335
Query: 181 VTH-KTEKSVDMLLRG 195
H +VD +L G
Sbjct: 336 RVHLDVGGAVDAILAG 351
>gi|159484693|ref|XP_001700387.1| predicted protein [Chlamydomonas reinhardtii]
gi|158272274|gb|EDO98076.1| predicted protein [Chlamydomonas reinhardtii]
Length = 324
Score = 259 bits (661), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 124/212 (58%), Positives = 156/212 (73%), Gaps = 1/212 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
+V DL+ G+S+L +GRPGVGKTT +RE+ R+ +DE +RVV+VDTSNEIGGDGD+PH +
Sbjct: 113 LVRDLVLAGRSVLLLGRPGVGKTTALREVCRIAADEAARRVVVVDTSNEIGGDGDVPHPS 172
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P QH VM+EAVENHMP+V+++DEI T AE A R+IA+RGV L+ TAH
Sbjct: 173 IGGARRMQVSRPEAQHAVMVEAVENHMPQVVVIDEISTLAECGAARTIAQRGVQLVATAH 232
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G L+N+IKNP L+DL+GG+ +VTLGDEEA+ R QKSILER APPTF +EM ER W
Sbjct: 233 GRQLDNVIKNPTLADLVGGIQSVTLGDEEAKRRGVQKSILERAAPPTFDVAVEMEERGRW 292
Query: 181 VTH-KTEKSVDMLLRGKTPLVEIRKRDDRFNV 211
H +VD LL G ++R DD V
Sbjct: 293 RVHLDVAAAVDSLLAGGEAAGQVRLLDDSGEV 324
>gi|145341893|ref|XP_001416037.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576260|gb|ABO94329.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 552
Score = 258 bits (660), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 124/197 (62%), Positives = 151/197 (76%), Gaps = 1/197 (0%)
Query: 8 YGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRM 67
+ SIL +GRPGVGKTT +REI+R+LSDE +RVVIVDTSNEIGGDGD+PH IG ARRM
Sbjct: 120 FNNSILLLGRPGVGKTTAIREISRILSDEHSRRVVIVDTSNEIGGDGDVPHRGIGGARRM 179
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
QVP S QH V+IEAVENH P+ ++VDEIGT+ EA A ++I+ERGV +IGTAHG LEN+
Sbjct: 180 QVPNASEQHLVLIEAVENHTPQTVVVDEIGTQQEADAAQTISERGVQMIGTAHGHTLENV 239
Query: 128 IKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TE 186
+KNP L DLIGGV +VTLGD+EAR R QKS+LER PPTF +EM + W H
Sbjct: 240 LKNPALCDLIGGVVSVTLGDDEARRRGVQKSVLERAGPPTFTIAVEMLDIGTWRVHTDVA 299
Query: 187 KSVDMLLRGKTPLVEIR 203
SVD LL G++P+ E+R
Sbjct: 300 ASVDALLAGQSPMTELR 316
>gi|307106236|gb|EFN54482.1| hypothetical protein CHLNCDRAFT_135149 [Chlorella variabilis]
Length = 581
Score = 258 bits (660), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 129/217 (59%), Positives = 164/217 (75%), Gaps = 7/217 (3%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
MV DL GKS+L +GRPGVGKTT +REI+R+L+DE Q+RVV+VDTSNEIGGDGDIPH
Sbjct: 130 MVADLARDGKSVLLLGRPGVGKTTAIREISRLLADECQRRVVVVDTSNEIGGDGDIPHPG 189
Query: 61 IGTARRMQ---VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIG 117
IG ARRMQ VP P QH+VMIEAVENHMP I++DEIGTEAE A R+IA+RGV L+
Sbjct: 190 IGGARRMQARAVPHPEQQHRVMIEAVENHMPSTIVIDEIGTEAECLAARTIAQRGVQLVA 249
Query: 118 TAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRER 177
TAHG LEN++KNP L+DL+GG+ +VTLGD+EA+ R QKS+LER++PPTF +EM R
Sbjct: 250 TAHGNELENVVKNPSLNDLVGGIASVTLGDDEAKRRGVQKSVLERQSPPTFDACVEMVSR 309
Query: 178 HYWVTHKTEKSVDMLLRGKTPLV---EIRKRDDRFNV 211
W H + + +L+ +T L+ E+R+RD+ V
Sbjct: 310 EQWRVH-LDAAPALLVSHRTVLLRRAEVRERDESGKV 345
>gi|302773391|ref|XP_002970113.1| hypothetical protein SELMODRAFT_410877 [Selaginella moellendorffii]
gi|300162624|gb|EFJ29237.1| hypothetical protein SELMODRAFT_410877 [Selaginella moellendorffii]
Length = 736
Score = 258 bits (660), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 125/209 (59%), Positives = 155/209 (74%), Gaps = 1/209 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M DL+ G S+L +G PGVGKTT +RE+AR+L+D++ +RVVIVDTSNEI GDGDIPH
Sbjct: 141 MARDLVSSGASLLLMGPPGVGKTTAIREVARMLADDYDRRVVIVDTSNEIAGDGDIPHPG 200
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV LQHK+MIEAVENHMPE I++DEIGTE EA A +IA+RGV L+ TAH
Sbjct: 201 IGRARRMQVTNVGLQHKIMIEAVENHMPETIVIDEIGTELEAAAAVTIAQRGVQLVATAH 260
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+IKNP L L+GG+ +VTLGD+EAR R QKS+LERK PP F IEM R W
Sbjct: 261 GTSVENLIKNPSLEILVGGIQSVTLGDDEARRRGVQKSVLERKGPPAFSTAIEMASRTEW 320
Query: 181 -VTHKTEKSVDMLLRGKTPLVEIRKRDDR 208
+ H ++D LL G++P +EIR D+
Sbjct: 321 RIHHSLTATIDALLAGRSPSIEIRNMKDK 349
>gi|332295596|ref|YP_004437519.1| single-stranded nucleic acid binding R3H domain-containing protein
[Thermodesulfobium narugense DSM 14796]
gi|332178699|gb|AEE14388.1| single-stranded nucleic acid binding R3H domain-containing protein
[Thermodesulfobium narugense DSM 14796]
Length = 520
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 128/224 (57%), Positives = 164/224 (73%), Gaps = 1/224 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ D++ ++IL +G PG+GKTT +REIARVLS + ++RV+++DTSNEIGGDGDIPH A
Sbjct: 118 IIKDIVESKENILLMGPPGIGKTTKLREIARVLSVDMKRRVIVIDTSNEIGGDGDIPHPA 177
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG +RRMQVP P QH VMIEAVENHMP+VIIVDEIGTE EA A R+IAERGV LI TAH
Sbjct: 178 IGKSRRMQVPTPEKQHAVMIEAVENHMPQVIIVDEIGTELEAQAARTIAERGVQLIATAH 237
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G L N+I NP LSDL+GGV VTL DEEA+ RR QK+I ERK PTF +IE+ +R
Sbjct: 238 GNSLVNLIMNPTLSDLVGGVQVVTLSDEEAKRRRTQKTIQERKTQPTFNVVIELLDREKM 297
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTYDRHD 223
V HK +K VD LL+G+ E+R + ++++ + + D
Sbjct: 298 VIHKNVDKVVDQLLKGEQIRPEVRSKSSDGKIIIEEHRMELKED 341
>gi|206896224|ref|YP_002246822.1| R3H domain-containing protein [Coprothermobacter proteolyticus DSM
5265]
gi|206738841|gb|ACI17919.1| R3H domain protein [Coprothermobacter proteolyticus DSM 5265]
Length = 515
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 132/201 (65%), Positives = 156/201 (77%), Gaps = 4/201 (1%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 69
KS+L +G+PGVGKTT++RE+AR+LS ++QKRV++VDTSNEI GDGD+PH AIG ARRMQV
Sbjct: 127 KSVLLMGKPGVGKTTLLREVARLLSVDYQKRVIVVDTSNEIAGDGDVPHPAIGLARRMQV 186
Query: 70 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 129
P P QH VMIEAVENHMPEVIIVDEIG + E A R+IAERGV LI TAHG LENI+
Sbjct: 187 PVPEQQHDVMIEAVENHMPEVIIVDEIGRKEEVDAARTIAERGVQLIATAHGNTLENILV 246
Query: 130 NPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKS 188
NP LSDL+GGV VTL DEEA R QK+ILERK PTF LIE+R R + H+ E++
Sbjct: 247 NPTLSDLVGGVQVVTLSDEEAHRRGTQKTILERKTSPTFDILIEIRARGVYAIHEDVERA 306
Query: 189 VDMLLRG--KTPLVEIRKRDD 207
VD LLRG PLV +R +DD
Sbjct: 307 VDSLLRGIPPNPLV-LRVKDD 326
>gi|299830572|ref|YP_003735020.1| hypothetical protein PyulOm_p071 [Durinskia baltica]
gi|297384936|gb|ADI40235.1| hypothetical protein [Durinskia baltica]
Length = 455
Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 125/205 (60%), Positives = 155/205 (75%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DLL KSIL +GRPGVGKTT++REI RVL+DE +KRV+I+DTSNEI GD DIPH
Sbjct: 115 VIRDLLESDKSILILGRPGVGKTTIIREIGRVLADEMEKRVIIIDTSNEIAGDSDIPHFG 174
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV + QH+VMIEAVENHMP+VII+DEIGT+ E A R+IAE+GV L+GT H
Sbjct: 175 IGRARRMQVSQTEFQHQVMIEAVENHMPQVIIIDEIGTDLEVLAARTIAEKGVKLVGTTH 234
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN+IKNP L++LIGG+ VTL DEEA+ R QKSILERKA PTF +IE+ + W
Sbjct: 235 GNCLENLIKNPSLAELIGGIKYVTLSDEEAKRRGTQKSILERKAYPTFELVIEINNSNSW 294
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRK 204
H+ SVD+ LR + +IR+
Sbjct: 295 TIHEDVAHSVDLFLRNNSGKEQIRQ 319
>gi|456062084|ref|YP_007476226.1| Ycf45 (chloroplast) [Pavlova lutheri]
gi|449327271|gb|AGE93827.1| Ycf45 (chloroplast) [Pavlova lutheri]
Length = 369
Score = 255 bits (652), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 133/225 (59%), Positives = 166/225 (73%), Gaps = 7/225 (3%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ +SIL +G+PGVGKTT +REI+R+LSDE KRV+I+DTSNEI GDGDIPH A
Sbjct: 115 IIRDLIEEEESILILGKPGVGKTTAIREISRILSDEMGKRVIIIDTSNEIAGDGDIPHPA 174
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG+ARRMQV P LQH +MIEAVENHMP+VII+DEI TE EA A ++IAERGV LIGTAH
Sbjct: 175 IGSARRMQVSHPELQHHIMIEAVENHMPQVIIIDEISTELEALAAQTIAERGVKLIGTAH 234
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LE++IKNP LSDLIGG+ VTLGDEEAR R QKS+LERK+ P F +E+ W
Sbjct: 235 GNSLESLIKNPTLSDLIGGIQYVTLGDEEARIRGTQKSVLERKSRPAFKIGLEIGNSKAW 294
Query: 181 VTH-KTEKSVDMLLRGKTPLVEIRKRDDRFN----VVVDRWKTYD 220
H EK+VD +L +T +E + RD N V+ ++ T+D
Sbjct: 295 AVHPNIEKAVDQIL--QTYRLENQVRDYSVNELRQVIQCKFSTFD 337
>gi|299830371|ref|YP_003734586.1| hypothetical protein KrfoC_p076 [Kryptoperidinium foliaceum]
gi|297385073|gb|ADI40371.1| conserved hypothetical protein [Kryptoperidinium foliaceum]
Length = 455
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 156/205 (76%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DLL KSIL +GRPGVGKTT++REIARVLSDE ++RV+I+DTSNEI GD DIPH
Sbjct: 115 VIRDLLESEKSILILGRPGVGKTTIIREIARVLSDEMEQRVIIIDTSNEIAGDSDIPHFG 174
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV + QH+VMIEAVENHMP+VII+DEIGT+ E A R+IAE+GV LIGT H
Sbjct: 175 IGRARRMQVSKTEFQHQVMIEAVENHMPQVIIIDEIGTDLEVLAARTIAEKGVKLIGTTH 234
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN++KNP L++LIGG+ VTL DEEA+ R QKSILERK+ PTF +IE+ W
Sbjct: 235 GNCLENLVKNPSLAELIGGIQYVTLSDEEAKRRGTQKSILERKSYPTFEHVIEINALKSW 294
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRK 204
+ H+ S+D+LLR ++R+
Sbjct: 295 IIHENVSSSIDLLLRNLYETEQLRQ 319
>gi|383788423|ref|YP_005472992.1| hypothetical protein CSE_07630 [Caldisericum exile AZM16c01]
gi|381364060|dbj|BAL80889.1| hypothetical protein CSE_07630 [Caldisericum exile AZM16c01]
Length = 496
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 126/205 (61%), Positives = 156/205 (76%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ D++ +++L +GRPGVGKTT++RE ARVLS E KRV+++DTSNEIGGDGDIPH
Sbjct: 118 ILKDIVTSDRNLLLLGRPGVGKTTLLREAARVLSTELGKRVIVIDTSNEIGGDGDIPHPG 177
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVP + Q +VMIEAVENH PEVII+DEIG EA ACR+IAERGV LI TAH
Sbjct: 178 IGNARRMQVPFGTAQEEVMIEAVENHFPEVIIIDEIGRAEEAKACRTIAERGVRLIATAH 237
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERH-Y 179
G +EN++ NP L DLIGG+ +VTL DEEA R QK++LERK+PPTF LIE+RER +
Sbjct: 238 GTSIENLLVNPTLQDLIGGITSVTLSDEEAARRGTQKTVLERKSPPTFDTLIEIRERGVF 297
Query: 180 WVTHKTEKSVDMLLRGKTPLVEIRK 204
+ H ++VD LLRG EIRK
Sbjct: 298 AIYHDVAETVDALLRGFPVFPEIRK 322
>gi|449456721|ref|XP_004146097.1| PREDICTED: uncharacterized protein ycf45-like [Cucumis sativus]
Length = 644
Score = 252 bits (644), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 119/205 (58%), Positives = 161/205 (78%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G S+L +G PGVGKTT++REIAR+L+++F+KRV+IVDTSNEIGGDGDIPH+
Sbjct: 164 LLRDLIQDGASLLLIGPPGVGKTTIIREIARILANDFKKRVMIVDTSNEIGGDGDIPHAG 223
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVP+ +QHKV+IEAVENHMP+VII+DEI T+ EA A +IA+RG+ L+ TAH
Sbjct: 224 IGNARRMQVPDSDMQHKVLIEAVENHMPQVIIIDEISTKLEAMAASTIAQRGIQLVATAH 283
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+I NP+L L+GG+ +VTLGDEEA RR QK++LERK P TF +E+ +
Sbjct: 284 GVTIENLIMNPLLEMLVGGIQSVTLGDEEASRRRVQKTVLERKGPSTFACGVEIISKTEL 343
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRK 204
H++ + +VD +L G+ P VE+RK
Sbjct: 344 RVHRSLDATVDAVLCGRYPNVEVRK 368
>gi|449523614|ref|XP_004168818.1| PREDICTED: uncharacterized protein ycf45-like, partial [Cucumis
sativus]
Length = 640
Score = 252 bits (643), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 119/205 (58%), Positives = 161/205 (78%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G S+L +G PGVGKTT++REIAR+L+++F+KRV+IVDTSNEIGGDGDIPH+
Sbjct: 160 LLRDLIQDGASLLLIGPPGVGKTTIIREIARILANDFKKRVMIVDTSNEIGGDGDIPHAG 219
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVP+ +QHKV+IEAVENHMP+VII+DEI T+ EA A +IA+RG+ L+ TAH
Sbjct: 220 IGNARRMQVPDSDMQHKVLIEAVENHMPQVIIIDEISTKLEAMAASTIAQRGIQLVATAH 279
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+I NP+L L+GG+ +VTLGDEEA RR QK++LERK P TF +E+ +
Sbjct: 280 GVTIENLIMNPLLEMLVGGIQSVTLGDEEASRRRVQKTVLERKGPSTFACGVEIISKTEL 339
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRK 204
H++ + +VD +L G+ P VE+RK
Sbjct: 340 RVHRSLDATVDAVLCGRYPNVEVRK 364
>gi|242624308|ref|YP_003002226.1| conserved hypothetical plastid protein Ycf45 [Aureoumbra
lagunensis]
gi|239997416|gb|ACS36938.1| conserved hypothetical plastid protein Ycf45 [Aureoumbra
lagunensis]
Length = 340
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 164/216 (75%), Gaps = 3/216 (1%)
Query: 2 VYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAI 61
+ D+L +SIL +GRPGVGKTT++REIAR+LS+E +KRVVIVDTSNEI GD D+PH A+
Sbjct: 117 IRDILLLNRSILILGRPGVGKTTIIREIARILSNELEKRVVIVDTSNEIAGDNDVPHVAV 176
Query: 62 GTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 121
G ARR+QV +LQH+ +IEAVENHMPEVII+DEIGTE EA + R+IAERGV LI T HG
Sbjct: 177 GRARRLQVKNSNLQHQSLIEAVENHMPEVIIIDEIGTEIEALSARTIAERGVQLIATTHG 236
Query: 122 EWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWV 181
LEN+IKNPIL DLIGG+ +VTL D+EA+ R +KSILERK TF +IE+ + W
Sbjct: 237 NHLENLIKNPILMDLIGGIQSVTLSDQEAKNRHTKKSILERKFAATFNIIIEINNYNSWT 296
Query: 182 THKT-EKSVDMLLRGKTPLVEIRK--RDDRFNVVVD 214
++ E+SVD LL+G+ P ++R D ++ +V D
Sbjct: 297 IYENVEESVDFLLKGQEPNKQVRTMLSDGKYTIVSD 332
>gi|357125252|ref|XP_003564309.1| PREDICTED: uncharacterized protein ycf45-like [Brachypodium
distachyon]
Length = 650
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 120/212 (56%), Positives = 160/212 (75%), Gaps = 1/212 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G S+L +G PGVGKTTV+REIAR+L+D+++KRV+IVDTSNEIGGDGDIPH
Sbjct: 183 LLQDLVKDGGSLLLIGPPGVGKTTVIREIARMLADDYKKRVMIVDTSNEIGGDGDIPHPG 242
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARR+QVP +QHKV+IEAVENHMP+ I++DEIGT+ EA A +IA+RG+ L+ +AH
Sbjct: 243 IGNARRLQVPNQEMQHKVLIEAVENHMPQAIVIDEIGTKLEAMAASTIAQRGIQLVASAH 302
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+ NP L L+GG+ +VTLGDEEA RR QK++LERK P TF + +E+ +
Sbjct: 303 GVTIENLTMNPSLEMLVGGIQSVTLGDEEANRRRVQKTVLERKGPSTFTYAVEIVSKTEL 362
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNV 211
H++ E +VD LL G+ P VEIRK +V
Sbjct: 363 RVHRSLEATVDALLAGRLPNVEIRKLGSNMSV 394
>gi|224056549|ref|XP_002298905.1| predicted protein [Populus trichocarpa]
gi|222846163|gb|EEE83710.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 119/205 (58%), Positives = 162/205 (79%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+H G S+LF+G PGVGKTT++REIAR+L+++++KRV+IVDTSNEIGGDGDIPH+
Sbjct: 180 LLRDLVHDGASLLFIGPPGVGKTTIIREIARMLANDYKKRVMIVDTSNEIGGDGDIPHAG 239
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVP+ +QHKV+IEAVENHMP+VI++DEIGT+ EA A +IA+RG+ L+ TAH
Sbjct: 240 IGNARRMQVPDLDMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAH 299
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+I NP L L+GG+ +VTLGDEEA R QK++LERK P TF +E+ +
Sbjct: 300 GITIENLILNPSLEMLVGGIQSVTLGDEEANRRGVQKTVLERKGPSTFSCGVEIISKTEL 359
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRK 204
H++ E +VD +L G++P VE+ K
Sbjct: 360 RVHRSLEATVDAILSGRSPHVEVCK 384
>gi|297842057|ref|XP_002888910.1| ATP binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297334751|gb|EFH65169.1| ATP binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 661
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 122/205 (59%), Positives = 158/205 (77%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G S+L +G PGVGKTT++RE+AR+L ++++KRV+IVDTSNEIGGDGDIPH
Sbjct: 184 LLRDLVQDGNSLLLIGPPGVGKTTMIREVARMLGNDYEKRVMIVDTSNEIGGDGDIPHPG 243
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVP +QHKV+IEAVENHMP+VI++DEIGT+ EA A +IAERG+ L+ TAH
Sbjct: 244 IGNARRMQVPNSDIQHKVLIEAVENHMPQVIVIDEIGTKLEAIAASTIAERGIQLVATAH 303
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+IKNP L L+GGV +VTLGDEEA R QK++LERK PPTF E+ +
Sbjct: 304 GATIENLIKNPSLDLLVGGVQSVTLGDEEATRRGGQKTVLERKGPPTFNCGAEIVSKTEV 363
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRK 204
H++ E +VD +L G+ P VEIRK
Sbjct: 364 RVHRSLEATVDAVLAGRLPNVEIRK 388
>gi|326488989|dbj|BAJ98106.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 650
Score = 250 bits (638), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 118/205 (57%), Positives = 156/205 (76%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G S+L +G PGVGKTTV+REIAR+L+D++ KRV+IVDTSNEI GDGDIPH
Sbjct: 181 LLQDLVKAGGSLLLIGPPGVGKTTVIREIARMLADDYDKRVMIVDTSNEIAGDGDIPHPG 240
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARR+QVP +QHKV+IEAVENHMP+ I++DEIGT+ EA A +IA+RG+ L+ +AH
Sbjct: 241 IGNARRLQVPNQEMQHKVLIEAVENHMPQAIVIDEIGTKLEAMAASTIAQRGIQLVASAH 300
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+ NP L L+GG+ +VTLGDEEA RR QK++LERK P TF + +E+ +
Sbjct: 301 GVTIENLTMNPSLDMLVGGIQSVTLGDEEASRRRVQKTVLERKGPSTFAYAVEIVSKTEL 360
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRK 204
H++ E +VD LL G+ P VEIRK
Sbjct: 361 RVHRSLEATVDALLAGRMPNVEIRK 385
>gi|194477061|ref|YP_002049240.1| hypothetical protein PCC_0600 [Paulinella chromatophora]
gi|171192068|gb|ACB43030.1| hypothetical protein PCC_0600 [Paulinella chromatophora]
Length = 477
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 117/196 (59%), Positives = 150/196 (76%), Gaps = 1/196 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DLL G+SIL +G PG+GKTT +REIAR+L+D+ +RV+I+DTSNEI GD DIPH +
Sbjct: 128 MIRDLLDSGQSILIMGCPGIGKTTALREIARLLADDLNRRVIIIDTSNEIAGDSDIPHPS 187
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P+LQH++MIEA+ENH PEVI++DEIGTE EA A R+IAERG+ LI TAH
Sbjct: 188 IGKARRMQVANPNLQHRMMIEAIENHTPEVIVIDEIGTEMEAQAARTIAERGIQLIATAH 247
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G+ L +++KNP LSDL+GG+ +V LGD+EA+ R QK++LER A PTF IEM H W
Sbjct: 248 GDGLASLVKNPTLSDLVGGIQSVILGDDEAQRRCTQKTVLERAADPTFPVAIEMHTSHRW 307
Query: 181 VTHK-TEKSVDMLLRG 195
H VD++LR
Sbjct: 308 SIHADVAHMVDIILRN 323
>gi|242092028|ref|XP_002436504.1| hypothetical protein SORBIDRAFT_10g003860 [Sorghum bicolor]
gi|241914727|gb|EER87871.1| hypothetical protein SORBIDRAFT_10g003860 [Sorghum bicolor]
Length = 657
Score = 249 bits (636), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 121/205 (59%), Positives = 156/205 (76%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G S+L +G PGVGKTTV+REIAR+L+D+++KRV+IVDTSNEIGGDGDIPH
Sbjct: 186 LLQDLVKDGGSLLLIGPPGVGKTTVIREIARMLADDYKKRVMIVDTSNEIGGDGDIPHPG 245
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARR+QVP +QHKV+IEAVENHMP+ I++DEIGT+ EA A +IA+RG+ L+ TAH
Sbjct: 246 IGNARRLQVPNQDMQHKVLIEAVENHMPQAIVIDEIGTKLEAMAASTIAQRGIQLVATAH 305
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+I NP L L+GG+ +VTLGDEEA R QK++LERK P TF E+ +
Sbjct: 306 GVTIENLIMNPSLEMLVGGIQSVTLGDEEANRRGVQKTVLERKGPSTFTCAAEIVSKKEL 365
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRK 204
H++ E +VD LL GK P VEIRK
Sbjct: 366 RVHRSLEATVDALLAGKLPNVEIRK 390
>gi|356514603|ref|XP_003525995.1| PREDICTED: uncharacterized protein ycf45-like [Glycine max]
Length = 651
Score = 249 bits (636), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 119/205 (58%), Positives = 159/205 (77%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G S+L +G PGVGKTT++REIAR+L+++++KRV+IVDTSNEIGGDGDIPH+
Sbjct: 176 LLQDLIQDGASLLLIGPPGVGKTTIIREIARMLANDYKKRVMIVDTSNEIGGDGDIPHAG 235
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVP +QHKV+IEAVENHMP+VI++DEIGT+ EA A +IA+RG+ L+ TAH
Sbjct: 236 IGNARRMQVPNSDMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAH 295
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+I NP L L+GG+ +VTLGDEEA R QK++LERK P TF +E+ +
Sbjct: 296 GITIENLIMNPSLEMLVGGIQSVTLGDEEASRRGVQKTVLERKGPSTFSCGVEIISKTEL 355
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRK 204
H++ E +VD +L G+ P VEIRK
Sbjct: 356 RIHRSLEATVDAILSGRFPNVEIRK 380
>gi|125554146|gb|EAY99751.1| hypothetical protein OsI_21736 [Oryza sativa Indica Group]
Length = 582
Score = 249 bits (636), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 122/205 (59%), Positives = 156/205 (76%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G S+L +G PGVGKTTV+REIAR+L+D+++KRV+IVDTSNEIGGDGDIPH
Sbjct: 109 LLQDLVKDGGSLLLIGPPGVGKTTVIREIARMLADDYRKRVMIVDTSNEIGGDGDIPHPG 168
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARR+QVP +QHKV+IEAVENHMP+ I++DEIGT+ EA A +IA+RG+ L+ TAH
Sbjct: 169 IGNARRLQVPNQDMQHKVLIEAVENHMPQAIVIDEIGTKLEAMAASTIAQRGIQLVATAH 228
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+I NP L L+GGV +VTLGDEEA R QK++LERK P TF E+ +
Sbjct: 229 GITIENLIMNPSLDMLVGGVQSVTLGDEEANRRGVQKTVLERKGPSTFTCAAEIVSKIEL 288
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRK 204
H++ E +VD LL GK P VEIRK
Sbjct: 289 RVHRSLEDTVDALLAGKMPNVEIRK 313
>gi|125596098|gb|EAZ35878.1| hypothetical protein OsJ_20178 [Oryza sativa Japonica Group]
Length = 581
Score = 249 bits (635), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 122/205 (59%), Positives = 156/205 (76%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G S+L +G PGVGKTTV+REIAR+L+D+++KRV+IVDTSNEIGGDGDIPH
Sbjct: 109 LLQDLVKDGGSLLLIGPPGVGKTTVIREIARMLADDYRKRVMIVDTSNEIGGDGDIPHPG 168
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARR+QVP +QHKV+IEAVENHMP+ I++DEIGT+ EA A +IA+RG+ L+ TAH
Sbjct: 169 IGNARRLQVPNQDMQHKVLIEAVENHMPQAIVIDEIGTKLEAMAASTIAQRGIQLVATAH 228
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+I NP L L+GGV +VTLGDEEA R QK++LERK P TF E+ +
Sbjct: 229 GITIENLIMNPSLDMLVGGVQSVTLGDEEANRRGVQKTVLERKGPSTFTCAAEIVSKIEL 288
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRK 204
H++ E +VD LL GK P VEIRK
Sbjct: 289 RVHRSLEDTVDALLAGKMPNVEIRK 313
>gi|412992135|emb|CCO19848.1| predicted protein [Bathycoccus prasinos]
Length = 773
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 123/208 (59%), Positives = 153/208 (73%), Gaps = 2/208 (0%)
Query: 16 GRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQ 75
G PGVGKTT +RE++R+LS +F +RVVIVDTSNEIGGDGD+ H +G +RRMQV +P LQ
Sbjct: 306 GPPGVGKTTAIREMSRLLSADFNQRVVIVDTSNEIGGDGDVAHPGVGNSRRMQVADPKLQ 365
Query: 76 HKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSD 135
H V+IEAVENH P+V+IVDEIGTE EA A R+I+ERGV +I TAHG LEN++KNP L D
Sbjct: 366 HAVLIEAVENHTPQVVIVDEIGTEEEAMAARTISERGVKMIATAHGHTLENVLKNPSLCD 425
Query: 136 LIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLR 194
L+GGV +VTLGD+EAR RR QK+ILER+ PPTF +EM + W H SVD LL
Sbjct: 426 LVGGVQSVTLGDDEARRRRGQKTILEREGPPTFSIAVEMLDIGLWRVHTDVASSVDALLA 485
Query: 195 GKTPLVEIRK-RDDRFNVVVDRWKTYDR 221
G+ P E+R R+D V V ++ R
Sbjct: 486 GQAPFTELRALREDGIVVQVPEFRENSR 513
>gi|255557073|ref|XP_002519569.1| Stage III sporulation protein AA, putative [Ricinus communis]
gi|223541266|gb|EEF42818.1| Stage III sporulation protein AA, putative [Ricinus communis]
Length = 726
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 118/209 (56%), Positives = 160/209 (76%), Gaps = 1/209 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G S+L +G PGVGKTT++REIAR+L+ +++KRV+IVDTSNEIGGDGDIPH+
Sbjct: 253 LLRDLIQDGSSLLLIGPPGVGKTTIIREIARMLATDYKKRVMIVDTSNEIGGDGDIPHAG 312
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVP QHKV+IEAVENHMP+VI++DEIGT+ EA A +IA+RG+ L+ T+H
Sbjct: 313 IGNARRMQVPNSDKQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATSH 372
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+I NP L L+GG+ +VTLGDEEA R QK++LERK P TF +E+ ++
Sbjct: 373 GVTIENLIVNPSLEMLVGGIQSVTLGDEEANRRGVQKTVLERKGPSTFSCAVEIIAKNEL 432
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRKRDDR 208
H++ E +VD +L G+ P VE+RK D +
Sbjct: 433 RVHRSLEATVDAILSGRPPNVEVRKMDSQ 461
>gi|115466506|ref|NP_001056852.1| Os06g0155600 [Oryza sativa Japonica Group]
gi|55296694|dbj|BAD69412.1| ATPase-like [Oryza sativa Japonica Group]
gi|55297449|dbj|BAD69300.1| ATPase-like [Oryza sativa Japonica Group]
gi|113594892|dbj|BAF18766.1| Os06g0155600 [Oryza sativa Japonica Group]
Length = 643
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 122/205 (59%), Positives = 156/205 (76%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G S+L +G PGVGKTTV+REIAR+L+D+++KRV+IVDTSNEIGGDGDIPH
Sbjct: 171 LLQDLVKDGGSLLLIGPPGVGKTTVIREIARMLADDYRKRVMIVDTSNEIGGDGDIPHPG 230
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARR+QVP +QHKV+IEAVENHMP+ I++DEIGT+ EA A +IA+RG+ L+ TAH
Sbjct: 231 IGNARRLQVPNQDMQHKVLIEAVENHMPQAIVIDEIGTKLEAMAASTIAQRGIQLVATAH 290
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+I NP L L+GGV +VTLGDEEA R QK++LERK P TF E+ +
Sbjct: 291 GITIENLIMNPSLDMLVGGVQSVTLGDEEANRRGVQKTVLERKGPSTFTCAAEIVSKIEL 350
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRK 204
H++ E +VD LL GK P VEIRK
Sbjct: 351 RVHRSLEDTVDALLAGKMPNVEIRK 375
>gi|194707358|gb|ACF87763.1| unknown [Zea mays]
Length = 554
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 120/205 (58%), Positives = 155/205 (75%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G S+L +G PGVGKTTV+REIAR+L+D+++KRV+IVDTSNEIGGDGDIPH
Sbjct: 82 LLQDLVKDGGSLLLIGPPGVGKTTVIREIARMLADDYKKRVMIVDTSNEIGGDGDIPHPG 141
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARR+QVP +QHKV+IEAVENHMP+ I++DEIGT+ EA A +IA+RG+ L+ TAH
Sbjct: 142 IGNARRLQVPNQDMQHKVLIEAVENHMPQAIVIDEIGTKLEAMAASTIAQRGIQLVATAH 201
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+I NP L L+GG+ +VTLGDEEA R QK++LERK P TF E+ +
Sbjct: 202 GVTIENLIMNPSLEMLVGGIQSVTLGDEEANRRGVQKTVLERKGPSTFTCAAEIVSKKEL 261
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRK 204
H++ E +VD LL GK P EIRK
Sbjct: 262 RVHRSLEATVDALLAGKLPNFEIRK 286
>gi|145327231|ref|NP_001077817.1| P-loop containing nucleoside triphosphate hydrolase [Arabidopsis
thaliana]
gi|332197302|gb|AEE35423.1| P-loop containing nucleoside triphosphate hydrolase [Arabidopsis
thaliana]
Length = 538
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 121/205 (59%), Positives = 157/205 (76%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G S+L +G PGVGKTT++RE+AR+L ++++KRV+IVDTSNEIGGDGDIPH
Sbjct: 61 LLRDLVQDGNSLLLIGPPGVGKTTMIREVARMLGNDYEKRVMIVDTSNEIGGDGDIPHPG 120
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVP +QHKV+IEAVENHMP+VI++DEIGT+ EA A +IAERG+ L+ TAH
Sbjct: 121 IGNARRMQVPNSDIQHKVLIEAVENHMPQVIVIDEIGTKLEAIAASTIAERGIQLVATAH 180
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+IKNP L L+GGV +VTLGDEEA R QK++LERK P TF E+ +
Sbjct: 181 GATIENLIKNPSLDLLVGGVQSVTLGDEEATRRGGQKTVLERKGPSTFNCGAEIVSKTEV 240
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRK 204
H++ E +VD +L G+ P VEIRK
Sbjct: 241 RVHRSLEATVDAILAGRLPNVEIRK 265
>gi|22330595|ref|NP_177460.2| P-loop containing nucleoside triphosphate hydrolase [Arabidopsis
thaliana]
gi|332197301|gb|AEE35422.1| P-loop containing nucleoside triphosphate hydrolase [Arabidopsis
thaliana]
Length = 666
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/205 (59%), Positives = 157/205 (76%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G S+L +G PGVGKTT++RE+AR+L ++++KRV+IVDTSNEIGGDGDIPH
Sbjct: 189 LLRDLVQDGNSLLLIGPPGVGKTTMIREVARMLGNDYEKRVMIVDTSNEIGGDGDIPHPG 248
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVP +QHKV+IEAVENHMP+VI++DEIGT+ EA A +IAERG+ L+ TAH
Sbjct: 249 IGNARRMQVPNSDIQHKVLIEAVENHMPQVIVIDEIGTKLEAIAASTIAERGIQLVATAH 308
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+IKNP L L+GGV +VTLGDEEA R QK++LERK P TF E+ +
Sbjct: 309 GATIENLIKNPSLDLLVGGVQSVTLGDEEATRRGGQKTVLERKGPSTFNCGAEIVSKTEV 368
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRK 204
H++ E +VD +L G+ P VEIRK
Sbjct: 369 RVHRSLEATVDAILAGRLPNVEIRK 393
>gi|12324328|gb|AAG52137.1|AC010556_19 putative ATPase; 52924-55985 [Arabidopsis thaliana]
Length = 652
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/205 (59%), Positives = 157/205 (76%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G S+L +G PGVGKTT++RE+AR+L ++++KRV+IVDTSNEIGGDGDIPH
Sbjct: 189 LLRDLVQDGNSLLLIGPPGVGKTTMIREVARMLGNDYEKRVMIVDTSNEIGGDGDIPHPG 248
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVP +QHKV+IEAVENHMP+VI++DEIGT+ EA A +IAERG+ L+ TAH
Sbjct: 249 IGNARRMQVPNSDIQHKVLIEAVENHMPQVIVIDEIGTKLEAIAASTIAERGIQLVATAH 308
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+IKNP L L+GGV +VTLGDEEA R QK++LERK P TF E+ +
Sbjct: 309 GATIENLIKNPSLDLLVGGVQSVTLGDEEATRRGGQKTVLERKGPSTFNCGAEIVSKTEV 368
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRK 204
H++ E +VD +L G+ P VEIRK
Sbjct: 369 RVHRSLEATVDAILAGRLPNVEIRK 393
>gi|226498156|ref|NP_001142150.1| uncharacterized protein LOC100274315 [Zea mays]
gi|223947319|gb|ACN27743.1| unknown [Zea mays]
gi|413942919|gb|AFW75568.1| hypothetical protein ZEAMMB73_728588 [Zea mays]
Length = 661
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 120/205 (58%), Positives = 155/205 (75%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G S+L +G PGVGKTTV+REIAR+L+D+++KRV+IVDTSNEIGGDGDIPH
Sbjct: 189 LLQDLVKDGGSLLLIGPPGVGKTTVIREIARMLADDYKKRVMIVDTSNEIGGDGDIPHPG 248
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARR+QVP +QHKV+IEAVENHMP+ I++DEIGT+ EA A +IA+RG+ L+ TAH
Sbjct: 249 IGNARRLQVPNQDMQHKVLIEAVENHMPQAIVIDEIGTKLEAMAASTIAQRGIQLVATAH 308
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+I NP L L+GG+ +VTLGDEEA R QK++LERK P TF E+ +
Sbjct: 309 GVTIENLIMNPSLEMLVGGIQSVTLGDEEANRRGVQKTVLERKGPSTFTCAAEIVSKKEL 368
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRK 204
H++ E +VD LL GK P EIRK
Sbjct: 369 RVHRSLEATVDALLAGKLPNFEIRK 393
>gi|18086459|gb|AAL57683.1| At1g73170/T18K17_17 [Arabidopsis thaliana]
Length = 666
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 121/205 (59%), Positives = 156/205 (76%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G S+L +G PGVGKTT++RE+AR+L ++++KRV+IVDTSNEIGGDGDIPH
Sbjct: 189 LLRDLVQDGNSLLLIGPPGVGKTTMIREVARMLGNDYEKRVMIVDTSNEIGGDGDIPHPG 248
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVP QHKV+IEAVENHMP+VI++DEIGT+ EA A +IAERG+ L+ TAH
Sbjct: 249 IGNARRMQVPNSDTQHKVLIEAVENHMPQVIVIDEIGTKLEAIAASTIAERGIQLVATAH 308
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+IKNP L L+GGV +VTLGDEEA R QK++LERK P TF E+ +
Sbjct: 309 GATIENLIKNPSLDLLVGGVQSVTLGDEEATRRGGQKTVLERKGPSTFNCGAEIVSKTEV 368
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRK 204
H++ E +VD +L G+ P VEIRK
Sbjct: 369 RVHRSLEATVDAILAGRLPNVEIRK 393
>gi|302142922|emb|CBI20217.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 157/205 (76%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G S+L +G PGVGKTT++RE+AR+L+++++KRV+IVDTSNEIGGDGDIPH+
Sbjct: 98 LLQDLVKDGASLLLIGPPGVGKTTIIREVARMLANDYKKRVMIVDTSNEIGGDGDIPHAG 157
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVP +QHKV+IEAVENHMP+VI++DEIGT+ EA A +IA+RG+ L+ TAH
Sbjct: 158 IGNARRMQVPNSDMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAH 217
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+I NP L L+GG+ +VTLGDEEA R QK++LERK P TF +E+ +
Sbjct: 218 GVTIENLIMNPSLEMLVGGIQSVTLGDEEASRRGVQKTVLERKGPSTFSCGVEIISKTEL 277
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRK 204
H + E +VD +L G+ P E+RK
Sbjct: 278 QVHPSLEATVDAILSGRFPHFEVRK 302
>gi|303287638|ref|XP_003063108.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455744|gb|EEH53047.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 766
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 134/268 (50%), Positives = 164/268 (61%), Gaps = 53/268 (19%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLS-------------------------- 34
M+ DLL G+S+L +GRPGVGKTT +REIARVLS
Sbjct: 286 MIRDLLVSGRSVLLLGRPGVGKTTAIREIARVLSGASYLTLDFSRRLSPPRVPRFQSRHT 345
Query: 35 --------DEFQ------------------KRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 68
D FQ +RVV+VDTSNEIGGDGD+PH IG ARRMQ
Sbjct: 346 STPFNSASDAFQLHPFNVRSYGQLPSDDCGRRVVVVDTSNEIGGDGDVPHPGIGGARRMQ 405
Query: 69 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 128
V EPS QH +IEAV+NH P+V++VDEIGTE E A R+I++RGV +I TAHG LEN++
Sbjct: 406 VTEPSEQHATLIEAVQNHTPQVVVVDEIGTELECAAARTISQRGVQMIATAHGHTLENVL 465
Query: 129 KNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEK 187
KNP L+DL+GGV +VTLGD+EAR RR QK+ LER+ PPTF +E+RE WV H
Sbjct: 466 KNPSLNDLVGGVVSVTLGDDEARKRRAQKTTLEREGPPTFGAAVEIRETGKWVVHLDVGV 525
Query: 188 SVDMLLRGKTPLVEIRKRDDRFNVVVDR 215
+VD LL G P VE+R DD V+ R
Sbjct: 526 AVDTLLAGYAPPVELRSVDDATGRVMSR 553
>gi|413942920|gb|AFW75569.1| hypothetical protein ZEAMMB73_728588 [Zea mays]
Length = 572
Score = 246 bits (628), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 120/205 (58%), Positives = 155/205 (75%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G S+L +G PGVGKTTV+REIAR+L+D+++KRV+IVDTSNEIGGDGDIPH
Sbjct: 189 LLQDLVKDGGSLLLIGPPGVGKTTVIREIARMLADDYKKRVMIVDTSNEIGGDGDIPHPG 248
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARR+QVP +QHKV+IEAVENHMP+ I++DEIGT+ EA A +IA+RG+ L+ TAH
Sbjct: 249 IGNARRLQVPNQDMQHKVLIEAVENHMPQAIVIDEIGTKLEAMAASTIAQRGIQLVATAH 308
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+I NP L L+GG+ +VTLGDEEA R QK++LERK P TF E+ +
Sbjct: 309 GVTIENLIMNPSLEMLVGGIQSVTLGDEEANRRGVQKTVLERKGPSTFTCAAEIVSKKEL 368
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRK 204
H++ E +VD LL GK P EIRK
Sbjct: 369 RVHRSLEATVDALLAGKLPNFEIRK 393
>gi|225461612|ref|XP_002282987.1| PREDICTED: uncharacterized protein ycf45 [Vitis vinifera]
Length = 667
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 157/205 (76%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G S+L +G PGVGKTT++RE+AR+L+++++KRV+IVDTSNEIGGDGDIPH+
Sbjct: 193 LLQDLVKDGASLLLIGPPGVGKTTIIREVARMLANDYKKRVMIVDTSNEIGGDGDIPHAG 252
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVP +QHKV+IEAVENHMP+VI++DEIGT+ EA A +IA+RG+ L+ TAH
Sbjct: 253 IGNARRMQVPNSDMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAH 312
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+I NP L L+GG+ +VTLGDEEA R QK++LERK P TF +E+ +
Sbjct: 313 GVTIENLIMNPSLEMLVGGIQSVTLGDEEASRRGVQKTVLERKGPSTFSCGVEIISKTEL 372
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRK 204
H + E +VD +L G+ P E+RK
Sbjct: 373 QVHPSLEATVDAILSGRFPHFEVRK 397
>gi|384248329|gb|EIE21813.1| hypothetical protein COCSUDRAFT_53863 [Coccomyxa subellipsoidea
C-169]
Length = 499
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 120/183 (65%), Positives = 144/183 (78%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M DL+ G+SILF+GRPGVGKTTV+RE +R+LS QKRVVI+DTSNEIGGDGDI H
Sbjct: 80 MAADLIASGRSILFMGRPGVGKTTVIRETSRLLSQLHQKRVVIIDTSNEIGGDGDIAHIG 139
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV + + QH+ MIEAVENHMPEV+IVDEIGTEAEA A RSIA+RGV L+ TAH
Sbjct: 140 IGRARRMQVSKVAAQHRTMIEAVENHMPEVVIVDEIGTEAEALAARSIAQRGVQLVATAH 199
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G L +IKNP LSDLIGG+ VTL DEEA+ R+ K+++ER APPTF +E+ +R+ W
Sbjct: 200 GGELARLIKNPTLSDLIGGIQAVTLSDEEAKRRKGPKTVIERCAPPTFDVAVEIIDRNTW 259
Query: 181 VTH 183
H
Sbjct: 260 RVH 262
>gi|442324641|ref|YP_007364662.1| hypothetical protein MYSTI_07706 [Myxococcus stipitatus DSM 14675]
gi|441492283|gb|AGC48978.1| hypothetical protein MYSTI_07706 [Myxococcus stipitatus DSM 14675]
Length = 604
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/207 (63%), Positives = 157/207 (75%), Gaps = 1/207 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ G+++L +GRPGVGKTT +RE+ARVL+D+ KRV++VDTSNEIGGDGD+PH
Sbjct: 121 MLKDLIGSGRNVLLLGRPGVGKTTKLREVARVLADDLGKRVMVVDTSNEIGGDGDVPHPG 180
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P QH VMIEAVENHMPE IIVDEIGT AEA A R+IAERGV L+ TAH
Sbjct: 181 IGGARRMQVSRPDRQHDVMIEAVENHMPEAIIVDEIGTSAEAAAARTIAERGVQLVATAH 240
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN++ NP LSDL+GGV TVTL D+EAR RR QK++ ERKAPPTF ++EM R
Sbjct: 241 GNTLENLVLNPTLSDLVGGVHTVTLSDDEARRRRTQKTVSERKAPPTFDIVVEMVNRDEV 300
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRD 206
H T ++VD LL GK E R RD
Sbjct: 301 RVHADTAEAVDRLLAGKEVGGERRWRD 327
>gi|444914392|ref|ZP_21234535.1| hypothetical protein D187_06705 [Cystobacter fuscus DSM 2262]
gi|444714624|gb|ELW55503.1| hypothetical protein D187_06705 [Cystobacter fuscus DSM 2262]
Length = 582
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/205 (64%), Positives = 155/205 (75%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ G++IL +GRPGVGKTT +RE+ARVL+D+ KRV++VDTSNEIGGDGDIPH
Sbjct: 123 MLKDLIASGQNILLLGRPGVGKTTKLREVARVLADDLGKRVMVVDTSNEIGGDGDIPHPG 182
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P QH VMIEAVENHMPE IIVDEIGT AEA A R+IAERGV L+ TAH
Sbjct: 183 IGGARRMQVSRPDRQHDVMIEAVENHMPEAIIVDEIGTSAEAAAARTIAERGVQLVATAH 242
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN++ NP LSDL+GGV TVTL DEEAR R QK+I ERK PPTF ++EM R
Sbjct: 243 GNTLENLVLNPTLSDLVGGVHTVTLSDEEARRRHTQKTITERKGPPTFDVVVEMVSRDEV 302
Query: 181 VTH-KTEKSVDMLLRGKTPLVEIRK 204
H T ++VD LL G+ P E R+
Sbjct: 303 RVHGDTAEAVDRLLAGEVPGGEQRQ 327
>gi|147816324|emb|CAN66201.1| hypothetical protein VITISV_007543 [Vitis vinifera]
Length = 693
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 114/205 (55%), Positives = 155/205 (75%), Gaps = 1/205 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G S+L +G PGVGKTT++RE+AR+L+++++KRV+IVDTSNEIGGDGDIPH+
Sbjct: 219 LLQDLVKDGASLLLIGPPGVGKTTIIREVARMLANDYKKRVMIVDTSNEIGGDGDIPHAG 278
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQVP +QHKV+IEAVENHMP+VI++DEIGT+ EA A +IA+RG+ L+ TAH
Sbjct: 279 IGNARRMQVPNSDMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAH 338
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G +EN+I NP L L+GG+ +VTLG EEA R Q ++LERK P TF +E+ +
Sbjct: 339 GVTIENLIMNPSLEMLVGGIQSVTLGXEEASRRGVQXTVLERKGPSTFSCGVEIISKTEL 398
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRK 204
H + E +VD +L G+ P E+RK
Sbjct: 399 QVHPSLEATVDAILSGRFPHFEVRK 423
>gi|403225170|gb|AFR24782.1| conserved hypothetical plastid protein Ycf45 [uncultured
Pelagomonas]
Length = 330
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 113/197 (57%), Positives = 151/197 (76%), Gaps = 1/197 (0%)
Query: 2 VYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAI 61
+ D+L + KSIL +G+PG GKTT++REIAR+ S+E +KRVVIVDTSNEI GD D+PH A+
Sbjct: 116 IRDILLHDKSILILGKPGSGKTTIIREIARIFSNELEKRVVIVDTSNEIAGDNDVPHVAV 175
Query: 62 GTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 121
G ARR+QV + LQH+V+IEAVENHMPEVII+DEI TE E + R+IAERGV LI TAHG
Sbjct: 176 GRARRLQVKKFDLQHQVLIEAVENHMPEVIIIDEISTETETLSARTIAERGVQLIATAHG 235
Query: 122 EWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWV 181
L N++KNPIL +LIGG+ +VTL D+ A+ R +KS+LER+ TF +IE+ W+
Sbjct: 236 NSLVNLVKNPILVNLIGGIQSVTLSDQSAKLRNTKKSVLERQFAATFDLIIEISSSDSWI 295
Query: 182 TH-KTEKSVDMLLRGKT 197
+ K E++VD++L G+
Sbjct: 296 IYDKVEEAVDLILNGEN 312
>gi|310817928|ref|YP_003950286.1| single-stranded nucleic acid binding r3h [Stigmatella aurantiaca
DW4/3-1]
gi|309391000|gb|ADO68459.1| Single-stranded nucleic acid binding R3H [Stigmatella aurantiaca
DW4/3-1]
Length = 544
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 127/197 (64%), Positives = 155/197 (78%), Gaps = 1/197 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ G+++L +GRPGVGKTT +RE+ARVL+D+ +KRV++VDTSNEIGGDGDIPH
Sbjct: 137 MLKDLIGTGRNVLLLGRPGVGKTTKLREVARVLADDLRKRVMVVDTSNEIGGDGDIPHPG 196
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P QH VMIEAVENHMPE IIVDEIGT AEA A R+IAERGV L+ TAH
Sbjct: 197 IGGARRMQVSRPDRQHDVMIEAVENHMPEAIIVDEIGTSAEAAAARTIAERGVQLVATAH 256
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN++ NP LSDL+GGV TVTL DEEAR R QK++ ERKAPPTF +++M R
Sbjct: 257 GNTLENLVLNPTLSDLVGGVHTVTLSDEEARRRNTQKTVSERKAPPTFDLVVQMVGRDEV 316
Query: 181 VTHK-TEKSVDMLLRGK 196
+ H+ T ++VD LL G+
Sbjct: 317 LVHRDTAEAVDRLLAGQ 333
>gi|88811456|ref|ZP_01126711.1| Single-stranded nucleic acid binding R3H [Nitrococcus mobilis
Nb-231]
gi|88791345|gb|EAR22457.1| Single-stranded nucleic acid binding R3H [Nitrococcus mobilis
Nb-231]
Length = 513
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 123/195 (63%), Positives = 152/195 (77%), Gaps = 1/195 (0%)
Query: 2 VYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAI 61
++DL+ G S+L +G PG+GKTT +REIARVL+DE +RV+++DTSNEI GDGDIPH I
Sbjct: 118 IHDLIAQGGSLLLLGPPGIGKTTRLREIARVLADECARRVIVIDTSNEIAGDGDIPHPGI 177
Query: 62 GTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 121
G ARRMQV P QH+VMIEAVENHMPEVIIVDEIGT AEA A R+IAERGV LIGTAHG
Sbjct: 178 GCARRMQVAHPDRQHRVMIEAVENHMPEVIIVDEIGTSAEAAAARTIAERGVQLIGTAHG 237
Query: 122 EWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWV 181
LEN++ NP L+DL+GGV TVTL DEEARAR QK++ ER PPTF ++E+ +R +
Sbjct: 238 TTLENLVLNPTLADLVGGVQTVTLSDEEARARGTQKTVSERCGPPTFDAVVEIVDRERLL 297
Query: 182 THK-TEKSVDMLLRG 195
H+ ++VD +L G
Sbjct: 298 IHRDAGRAVDAILSG 312
>gi|147841865|emb|CAN66926.1| hypothetical protein VITISV_011830 [Vitis vinifera]
Length = 678
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 119/194 (61%), Positives = 146/194 (75%), Gaps = 11/194 (5%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
+V DL+ G SIL +G PGVGKTT++REIAR+L+DE KRVVIVDTSNEIGGDGD+PHS
Sbjct: 205 IVRDLVEGGGSILVIGPPGVGKTTLIREIARMLADEHMKRVVIVDTSNEIGGDGDVPHSG 264
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG A+ VMIEAVENHMPE II+DEIGTE EA A +IA+RGV L+GTAH
Sbjct: 265 IGRAK----------EDVMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVGTAH 314
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRER-HY 179
G ++NI+KNP L L+GG+++VTLGDEEAR R+ QK+ILERK PPTF +EM R H
Sbjct: 315 GMTIDNIMKNPSLQILVGGIESVTLGDEEARKRKVQKTILERKGPPTFTCAVEMISRTHC 374
Query: 180 WVTHKTEKSVDMLL 193
V H+ + +VD +L
Sbjct: 375 RVHHRLDATVDAIL 388
>gi|383459841|ref|YP_005373830.1| hypothetical protein COCOR_07880 [Corallococcus coralloides DSM
2259]
gi|380731791|gb|AFE07793.1| hypothetical protein COCOR_07880 [Corallococcus coralloides DSM
2259]
Length = 564
Score = 229 bits (584), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 127/208 (61%), Positives = 153/208 (73%), Gaps = 1/208 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+ DL+ G+++L +GRPGVGKTT +RE+ARVL+D KRV++VDTSNEIGGDGDIPH
Sbjct: 118 MLRDLVESGRNLLLLGRPGVGKTTKLREVARVLADALGKRVMVVDTSNEIGGDGDIPHPG 177
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARRMQV P QH VMIEAVENHMPE I+VDEIGT AEA A R+IAERGV L+ TAH
Sbjct: 178 IGGARRMQVSRPDRQHDVMIEAVENHMPEAIVVDEIGTAAEAAAARTIAERGVQLVATAH 237
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G LEN++ NP LSDL+GGV TVTL D+EAR R QK++ ERK PTF ++EM R
Sbjct: 238 GNTLENLVLNPTLSDLVGGVQTVTLSDDEARRRGTQKTVTERKGTPTFDIVVEMVNRDEV 297
Query: 181 VTHK-TEKSVDMLLRGKTPLVEIRKRDD 207
H+ T +VD LL G E R++ D
Sbjct: 298 RVHRDTGGAVDRLLTGAEVGGEKRRQQD 325
>gi|110740513|dbj|BAE98362.1| hypothetical protein [Arabidopsis thaliana]
Length = 449
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 112/174 (64%), Positives = 135/174 (77%), Gaps = 1/174 (0%)
Query: 32 VLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVI 91
+L+DE +KRVVIVDTSNEIGGDGD+PHS IG ARRMQVP +LQH VMIEAVENHMPE I
Sbjct: 1 MLADEHRKRVVIVDTSNEIGGDGDVPHSGIGRARRMQVPNVNLQHDVMIEAVENHMPETI 60
Query: 92 IVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEAR 151
I+DEIGTE EA A +IA+RGV L+ TAHG ++NIIKNP L LIGG+++VTLGDEEAR
Sbjct: 61 IIDEIGTELEALAASTIAQRGVQLVATAHGMTIDNIIKNPSLQILIGGIESVTLGDEEAR 120
Query: 152 ARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVDMLLRGKTPLVEIRK 204
R+ QK+ILERK PPTF +EM R H + + +VD +L GK+ EIR+
Sbjct: 121 KRKVQKTILERKGPPTFTCAVEMISRTECRVHQRLDVTVDAILAGKSAPFEIRQ 174
>gi|440792694|gb|ELR13902.1| sporulation proteinrelated, putative [Acanthamoeba castellanii str.
Neff]
Length = 786
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 119/221 (53%), Positives = 148/221 (66%), Gaps = 8/221 (3%)
Query: 1 MVYDLLHYGK----SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDI 56
MV D+L SIL +G PG+GKT+V+RE+AR L+ E+ V+IVDTSNEI GDGDI
Sbjct: 514 MVADVLARAAPCKASILLLGAPGMGKTSVIREMARELAREWS--VMIVDTSNEIAGDGDI 571
Query: 57 PHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLI 116
PH AIG ARRMQVP+ S QHK MIEAV+NH P+VIIVDEIGT EA AC +IA RGVML+
Sbjct: 572 PHPAIGAARRMQVPQASEQHKRMIEAVQNHTPDVIIVDEIGTAEEAKACCTIARRGVMLV 631
Query: 117 GTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARAR-RCQKSILERKAPPTFYFLIEMR 175
TAHG L +++ NP L+ ++GGV+ V L D A AR QK++ E + P F IE+R
Sbjct: 632 ATAHGVTLSDVVDNPSLNSVVGGVEAVILSDAAALARGSAQKTVRESRGPSAFGLAIELR 691
Query: 176 ERHYWVTH-KTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 215
R WV H +V+ LL GK VE+R+R VV R
Sbjct: 692 SRSEWVVHDDVRANVNRLLAGKPMAVEVRRRLADGRVVATR 732
>gi|356534378|ref|XP_003535732.1| PREDICTED: uncharacterized protein ycf45-like [Glycine max]
Length = 568
Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 100/147 (68%), Positives = 124/147 (84%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G SIL +G PGVGKTT++REIAR+L+DEF+KRVVIVDTSNEIGGDGD+PH+
Sbjct: 162 IIRDLVEDGGSILVIGPPGVGKTTLIREIARMLADEFRKRVVIVDTSNEIGGDGDVPHAG 221
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARR QVP ++QH VMIEA+ENHMPE II+DEIGTE EA A +IA+RGV L+GTAH
Sbjct: 222 IGRARRTQVPNVNMQHGVMIEAIENHMPETIIIDEIGTELEALAASTIAQRGVQLVGTAH 281
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGD 147
G +ENIIKNP L L+GG+++VTLG+
Sbjct: 282 GMTIENIIKNPYLQILVGGIESVTLGE 308
>gi|11465517|ref|NP_045092.1| hypothetical protein CycaCp075 [Cyanidium caldarium]
gi|14424118|sp|O19920.1|YCF45_CYACA RecName: Full=Uncharacterized protein ycf45
gi|2465740|gb|AAB82669.1| unknown [Cyanidium caldarium]
Length = 335
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 101/204 (49%), Positives = 145/204 (71%), Gaps = 1/204 (0%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ +S L +GRPG+GKT+ +REI+R+LS+E KRV+IVD++NEI G+G PH +
Sbjct: 115 IIRDLIESNQSTLLIGRPGIGKTSFIREISRILSNEIMKRVIIVDSANEISGEGCCPHIS 174
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
G ARRM+V + QH+VMIEA+ENH PE+II+DEIGTE E+ A SI++RG+ LIG+AH
Sbjct: 175 TGKARRMEVQSINSQHEVMIEAIENHTPEIIIIDEIGTEYESQAAISISQRGIRLIGSAH 234
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEM-RERHY 179
L N+ KNP L L+GG+++VTL D +A R+ +K+ILERK F IE+ ++R
Sbjct: 235 SSDLFNLAKNPTLCKLVGGIESVTLSDTQAILRKTKKTILERKGCSCFNATIEINKKRTV 294
Query: 180 WVTHKTEKSVDMLLRGKTPLVEIR 203
V E+S+D +L G+ +IR
Sbjct: 295 KVYTSVEQSIDAILEGRVNNSQIR 318
>gi|307109172|gb|EFN57410.1| hypothetical protein CHLNCDRAFT_21069 [Chlorella variabilis]
Length = 258
Score = 206 bits (523), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 103/185 (55%), Positives = 134/185 (72%), Gaps = 3/185 (1%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEP 72
+ G PGVGKTT++R++A +LSD F ++VV+VDTSNE+ GDG PH+ IG+ARRM VP
Sbjct: 69 ILQGGPGVGKTTLLRDVASLLSDTFSQKVVVVDTSNEVAGDGSEPHACIGSARRMMVP-- 126
Query: 73 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 132
S QH VMIE V+NHMP+V+IVDEIGT E ACRSIA RGV+L+GTAHG L+ +++NP
Sbjct: 127 SQQHSVMIETVQNHMPDVVIVDEIGTAREVEACRSIAHRGVVLVGTAHGRSLKALMRNPD 186
Query: 133 LSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDM 191
L+ LIGG+ VTLGDEEAR K+ ER+ P F L+E+ R W H + +SVD
Sbjct: 187 LNGLIGGIHQVTLGDEEARRSNHGKTRTERRGEPAFSTLVEVLSRSRWRVHMSVARSVDD 246
Query: 192 LLRGK 196
+L G+
Sbjct: 247 MLAGR 251
>gi|159481614|ref|XP_001698873.1| hypothetical protein CHLREDRAFT_151995 [Chlamydomonas reinhardtii]
gi|158273365|gb|EDO99155.1| predicted protein [Chlamydomonas reinhardtii]
Length = 715
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 98/190 (51%), Positives = 134/190 (70%), Gaps = 2/190 (1%)
Query: 6 LHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTAR 65
L S+L VGRPG GKTTV+R+IAR+L+D+ +RVV+VDTSNEI GD PH IG+AR
Sbjct: 422 LEAAGSLLLVGRPGSGKTTVLRDIARLLADDLDRRVVVVDTSNEIAGDDPTPHPCIGSAR 481
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
RM VP L +VM+EAV+NH PEV++VDEI +E E A +SIA+RGVML+ T HG L+
Sbjct: 482 RMMVPRRELLWRVMLEAVQNHGPEVLVVDEISSEEEVLAAQSIAQRGVMLVATTHGPSLK 541
Query: 126 NIIKNPILSDLIGGVDTVTLGDEEAR-ARRCQKSILERKAPPTFYFLIEMRERHYWVTHK 184
+++N L+ L+GG++ VT+GD AR + K+ LERK PTF ++E++ + H
Sbjct: 542 ALLRNHTLNPLLGGIEVVTIGDVAARESNSGNKTRLERKDMPTFAAVVEVKPGGRLLVHP 601
Query: 185 -TEKSVDMLL 193
T +SVD+LL
Sbjct: 602 DTAESVDLLL 611
>gi|440794844|gb|ELR15989.1| R3H domain containing protein [Acanthamoeba castellanii str. Neff]
Length = 441
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/191 (53%), Positives = 133/191 (69%), Gaps = 16/191 (8%)
Query: 1 MVYDLLHYGK----SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDI 56
MV D+L SIL +G PG+GKT+V+RE+AR L++E+ V+IVDTSNEI G GDI
Sbjct: 235 MVADVLQRAAERKASILLLGSPGMGKTSVLREMARELANEWS--VMIVDTSNEIAGAGDI 292
Query: 57 PHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDE---------IGTEAEAHACRS 107
PH+AIG ARRMQV S QHK MIEAV+NH P++IIVDE IGT++EA AC +
Sbjct: 293 PHTAIGEARRMQVLPGSGQHKCMIEAVQNHTPDIIIVDEVCPISEWPCIGTKSEAAACCT 352
Query: 108 IAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQ-KSILERKAPP 166
IA RGVML+ TAHG L++++ NP L+ ++GGV +VTLGD+ R R + K++ E K P
Sbjct: 353 IARRGVMLVATAHGLTLQDVVDNPGLNSVVGGVQSVTLGDDAVRERGAKHKTVRECKGPS 412
Query: 167 TFYFLIEMRER 177
F IE+R R
Sbjct: 413 AFAVAIELRSR 423
>gi|290995997|ref|XP_002680569.1| predicted protein [Naegleria gruberi]
gi|284094190|gb|EFC47825.1| predicted protein [Naegleria gruberi]
Length = 303
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 94/171 (54%), Positives = 130/171 (76%), Gaps = 4/171 (2%)
Query: 4 DLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGT 63
DL+ GKSIL +G+PG GKTT +R+ A+ LS+ +RVV+VDTS EIGG GDIPH AIG
Sbjct: 137 DLIEEGKSILLLGKPGAGKTTFIRDFAKTLSES--RRVVVVDTSCEIGGFGDIPHVAIGK 194
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 123
ARRMQV + Q +VMI+AV+NH PEVI++DEIGT+ E R+I++RGV+L G+AHG+
Sbjct: 195 ARRMQVADIRRQQEVMIQAVQNHTPEVIVIDEIGTKDEVSTARTISQRGVILCGSAHGD- 253
Query: 124 LENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEM 174
+++I+KNPIL DL+GGV++V +GD A +R +K L+ KA P F +I++
Sbjct: 254 MKSILKNPILCDLLGGVESVIMGDRNA-SRDGEKMRLQLKADPVFDVVIQL 303
>gi|390337533|ref|XP_785121.2| PREDICTED: uncharacterized protein LOC579939 [Strongylocentrotus
purpuratus]
Length = 1849
Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats.
Identities = 85/194 (43%), Positives = 128/194 (65%), Gaps = 3/194 (1%)
Query: 2 VYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAI 61
++DL++ G+SILFVG PGVGK+T++RE ARV++D +RVVIVDT NEI GDGD+PH A+
Sbjct: 1621 LFDLMNQGQSILFVGSPGVGKSTILREAARVINDVVMRRVVIVDTCNEIAGDGDVPHPAV 1680
Query: 62 GTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 121
G ARR+Q+P+ Q ++ E V NH P +++DE+ TEA+A A + ERG+ +I A G
Sbjct: 1681 GGARRVQLPDRDSQPNMIREIVRNHSPHTLVIDEVVTEADAAAVHATRERGIQVISAAPG 1740
Query: 122 EWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWV 181
+ L+++I NP L L GG+ + + +I++R P F L+EM +RH W+
Sbjct: 1741 QTLQDVILNPKLRHLFGGIHNMAMSHPGQGI--TGHTIMQRTQPAAFDILVEMYDRHRWI 1798
Query: 182 THKT-EKSVDMLLR 194
H +S+D+ L+
Sbjct: 1799 VHTDFTRSIDLCLQ 1812
>gi|224030195|gb|ACN34173.1| unknown [Zea mays]
Length = 442
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/143 (58%), Positives = 108/143 (75%), Gaps = 1/143 (0%)
Query: 67 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 126
MQVP+ ++QH VMIEAVENHMPEVI++DEIGTE EA A +IA+RGV L+GTAHG +E+
Sbjct: 1 MQVPKVTMQHNVMIEAVENHMPEVIVIDEIGTELEAMAATTIAQRGVQLVGTAHGVTIES 60
Query: 127 IIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEM-RERHYWVTHKT 185
IIKNP L L+GG+++VTLGDEEA+ R+ QK+ILERK PPTF +EM + V H+
Sbjct: 61 IIKNPCLQMLVGGIESVTLGDEEAKKRKVQKTILERKGPPTFLCAVEMISKTECRVHHRL 120
Query: 186 EKSVDMLLRGKTPLVEIRKRDDR 208
+ +VD +L GK P E RK ++
Sbjct: 121 DATVDAILAGKPPKFEARKMHNK 143
>gi|291000444|ref|XP_002682789.1| predicted protein [Naegleria gruberi]
gi|284096417|gb|EFC50045.1| predicted protein [Naegleria gruberi]
Length = 282
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 83/142 (58%), Positives = 112/142 (78%), Gaps = 3/142 (2%)
Query: 4 DLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGT 63
DL+ GKSIL +G+PG GKTT +R+ A+ LS+ +RVV+VDTS EIGG GD+PH AIG
Sbjct: 144 DLIEQGKSILLLGKPGSGKTTFIRDFAKTLSES--RRVVVVDTSCEIGGFGDVPHVAIGK 201
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 123
ARRMQV + Q +VMI+AV+NH PEVI++DEIGT E R+IA+RGV+L G+AHG+
Sbjct: 202 ARRMQVADIRRQQEVMIQAVQNHTPEVIVIDEIGTRDEVSTARTIAQRGVVLCGSAHGD- 260
Query: 124 LENIIKNPILSDLIGGVDTVTL 145
+++I+KNPIL DL+GGV++V +
Sbjct: 261 MKSILKNPILCDLLGGVESVIM 282
>gi|290985586|ref|XP_002675506.1| predicted protein [Naegleria gruberi]
gi|284089103|gb|EFC42762.1| predicted protein [Naegleria gruberi]
Length = 508
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/201 (43%), Positives = 130/201 (64%), Gaps = 8/201 (3%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
+ D+ + ++IL VG P GK+T++R+++RVLS+ Q RVVIVDTS EI G GD+PHSA
Sbjct: 281 LFKDVTNSNENILLVGIPNSGKSTLIRDLSRVLSE--QNRVVIVDTSCEIAGLGDVPHSA 338
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
G +RR+ V +P Q M+ AV+NH P+VI++DEI E CR+I++RGV L +AH
Sbjct: 339 TGDSRRIPVKDPKNQRVDMLRAVQNHSPQVIVIDEISDSKEVQTCRTISQRGVRLCASAH 398
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHY- 179
G LE ++ NP+L DL+GGV VT+ D+ AR + QK I + K P F +IE+++
Sbjct: 399 G-TLEKLLVNPVLRDLLGGVGDVTVSDDSARQKGGQKIINQMKGSPIFGIIIEVKKSQNG 457
Query: 180 ---WVTHKTEK-SVDMLLRGK 196
W+ + K +V +L G+
Sbjct: 458 DTEWIIYNNVKETVRSILNGQ 478
>gi|159466478|ref|XP_001691436.1| predicted protein [Chlamydomonas reinhardtii]
gi|158279408|gb|EDP05169.1| predicted protein [Chlamydomonas reinhardtii]
Length = 382
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 86/175 (49%), Positives = 118/175 (67%), Gaps = 1/175 (0%)
Query: 4 DLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGT 63
D G S+L +GRPG GKTT++R+IAR L+D+ VV+VDTSNEI G +PHS IG+
Sbjct: 206 DRFTTGGSLLLLGRPGAGKTTLLRDIARFLADDLGLSVVVVDTSNEIAGGDTVPHSCIGS 265
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 123
ARR++V VM+EAV+NH P+V++VDE+G+ EA A RSI++RGVML+ TAHG
Sbjct: 266 ARRLKVGRRDQLQAVMLEAVQNHGPQVVVVDELGSRQEAEAARSISQRGVMLVATAHGTD 325
Query: 124 LENIIKNPILSDLIGGVDTVTL-GDEEARARRCQKSILERKAPPTFYFLIEMRER 177
L +I+ NP L+ L+GG+ TV L A K+ ER+ PTF L+E++ R
Sbjct: 326 LRSIMGNPDLNSLVGGMQTVILGDAAAGAAHGGAKTRTERRGEPTFRCLVEVQGR 380
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 101 EAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTL-GDEEARARRCQKSI 159
EA A RSI++RGVML+ TAHG L +I+ NP L+ L+GG+ TV L A K+
Sbjct: 63 EAEAARSISQRGVMLVATAHGTDLRSIMGNPDLNSLVGGMQTVILGDAAAGAAHGGAKTR 122
Query: 160 LERKAPPTFYFLIEMRERHYWVTHKTEK 187
ER+ PTF L+E++ R ++ K
Sbjct: 123 TERRGEPTFRCLVEVQGRGMFLFFDNSK 150
>gi|159466496|ref|XP_001691445.1| hypothetical protein CHLREDRAFT_145023 [Chlamydomonas reinhardtii]
gi|158279417|gb|EDP05178.1| predicted protein [Chlamydomonas reinhardtii]
Length = 415
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 115/165 (69%), Gaps = 1/165 (0%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 70
S+L +GRPG GKTT++R+IAR L+D+ VV+VDTSNEI G +PHS IG+ARR++V
Sbjct: 209 SLLLLGRPGAGKTTLLRDIARFLADDLGLSVVVVDTSNEIAGGDAVPHSCIGSARRLKVG 268
Query: 71 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 130
VM+EAV+NH P+V++VDE+G+ EA A RSI++RGVML+ TAHG L +I+ N
Sbjct: 269 RRDQLQAVMLEAVQNHGPQVVVVDELGSRQEAEAARSISQRGVMLVATAHGTDLRSIMGN 328
Query: 131 PILSDLIGGVDTVTL-GDEEARARRCQKSILERKAPPTFYFLIEM 174
P L+ L+GG+ TV L A+ K+ ER+ PTF L+E+
Sbjct: 329 PDLNSLVGGMQTVILGDAAAGAAQGGAKTRTERRGEPTFRCLVEV 373
>gi|298705543|emb|CBJ28810.1| expressed unknown protein [Ectocarpus siliculosus]
Length = 305
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/200 (45%), Positives = 130/200 (65%), Gaps = 8/200 (4%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPH-SAIGTARRMQV 69
S+L +G+PG GKTTV+R+I R +S E + VVIVDTSNEI GDG IPH +AIG +RRM V
Sbjct: 75 SVLVLGKPGCGKTTVLRDICRKISQE--QTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMV 132
Query: 70 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 129
P+ + QH VM EA++NH P+ I+VDE+ + EA AC I RGV ++ +AHG+ L+++++
Sbjct: 133 PDKTDQHNVMKEALQNHTPQTIVVDEVSNKNEARACLDIKARGVRVVASAHGD-LQSLLE 191
Query: 130 NPILSDLIGGVDTVTLGDEEARARRCQKSIL-ERKAPPTFYFLIEMR--ERHYW-VTHKT 185
NP L+ L+GG +VTLGD A A + +R P F ++E+ + + W +
Sbjct: 192 NPELNTLVGGTTSVTLGDAMAIATNAGNKVQRQRAGAPIFDTIVELERGQVNKWTIVWNV 251
Query: 186 EKSVDMLLRGKTPLVEIRKR 205
+ +VD +L GK V R R
Sbjct: 252 DLAVDAILSGKPYKVSQRTR 271
>gi|301109912|ref|XP_002904036.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262096162|gb|EEY54214.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 392
Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 93/216 (43%), Positives = 129/216 (59%), Gaps = 15/216 (6%)
Query: 1 MVYDLL----HYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDI 56
++ DLL H KS+L +G PG GKTT++R++AR +S E + V I+DTSNEIGGDG +
Sbjct: 172 VLTDLLLSNKHANKSVLVLGHPGSGKTTLIRDVARCVS-ETMENVCIIDTSNEIGGDGLV 230
Query: 57 PHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLI 116
PH +G ARRM VP Q VM+E V+NH E +IVDEIG +AE A ++ +RG LI
Sbjct: 231 PHECVGWARRMMVPSLEAQAGVMVECVQNHTVETLIVDEIGRKAEVLAASTVRQRGPRLI 290
Query: 117 GTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEM-- 174
+AHG++ +IKNP L L+GG VT+GD+EA++ K +R P F ++E+
Sbjct: 291 ASAHGDF-RALIKNPDLKGLVGGSQQVTIGDKEAKSLNKGKLQTQRAGNPIFDVIVELDH 349
Query: 175 ----RERHYWVTHKTEKSVDMLLRGKTPLVEIRKRD 206
R R W +VD +L G E R+ D
Sbjct: 350 VVRGRCRIIW---DVATAVDNVLEGNDYAFETRRWD 382
>gi|390337535|ref|XP_784840.3| PREDICTED: uncharacterized protein ycf45-like [Strongylocentrotus
purpuratus]
Length = 441
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 126/205 (61%), Gaps = 8/205 (3%)
Query: 2 VYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAI 61
+YD+ + GKSIL VG GVGKTT++RE ARVLSD +K V+I+DT +EI G+GDIPH +I
Sbjct: 212 LYDIFNKGKSILVVGPTGVGKTTLLREAARVLSDVEKKNVMIIDTLSEIAGEGDIPHQSI 271
Query: 62 GTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 121
G+ARR+QV E +LQHKVM E +NH PE++I+DEI + EA + RG+ LI G
Sbjct: 272 GSARRLQVIESNLQHKVMSEVYQNHRPEIVIIDEISSLEEAEKTLDMKLRGIQLIAGVQG 331
Query: 122 EWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWV 181
+ L +++ N L+ + GG+ ++G R R P F L+EM + W+
Sbjct: 332 KTLADVLLNTALTPITGGIKE-SVGYPGGVPGRL------RTGPVVFDVLVEMLDMERWI 384
Query: 182 TH-KTEKSVDMLLRGKTPLVEIRKR 205
H + ++D +L G +E+ +R
Sbjct: 385 IHWDFQWAIDAVLPGGRRTLEVEER 409
>gi|428178844|gb|EKX47717.1| hypothetical protein GUITHDRAFT_69358 [Guillardia theta CCMP2712]
Length = 353
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 115/190 (60%), Gaps = 8/190 (4%)
Query: 4 DLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGT 63
DLL S+L +GRP GKTT +RE AR LS++ + VV+VD + EIGGDG +PH AIG
Sbjct: 127 DLLQSTGSVLLIGRPNSGKTTCLREFARRLSEDKNQIVVVVDKTCEIGGDGIVPHPAIGN 186
Query: 64 ARRMQVPEP-------SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLI 116
AR + V +LQH+ M EAVEN P V+IVDEI + E A R++++RG+ +I
Sbjct: 187 ARWLPVETLKKDGQMFNLQHERMREAVENQSPHVVIVDEISSATEVEAIRTMSQRGIRII 246
Query: 117 GTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARR-CQKSILERKAPPTFYFLIEMR 175
HG L ++ +P + L GG TV L EEA R+ QKS+L R P F +EM
Sbjct: 247 AAVHGGTLPMLLHDPDRAALTGGCHTVLLSGEEANKRKDKQKSVLMRMHEPMFQMAVEMH 306
Query: 176 ERHYWVTHKT 185
ER+ W+ H+
Sbjct: 307 ERNRWILHRN 316
>gi|340054200|emb|CCC48495.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 537
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/188 (45%), Positives = 120/188 (63%), Gaps = 7/188 (3%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDE-FQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 69
S+L V + GVGKTT++R+IA LS + + RVV+VDTSNEIGGD +P +G RR+QV
Sbjct: 252 SLLIVSKAGVGKTTLLRDIATSLSRKPCRPRVVVVDTSNEIGGDSPVPLPFLGRCRRIQV 311
Query: 70 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 129
P Q +M + ++NH PE ++VDEI T AEA A SI++RGV LI T HGE L +++
Sbjct: 312 PRREDQGDLMKQVLQNHSPEYVVVDEISTAAEAEAAWSISQRGVCLIATCHGESLAGVLQ 371
Query: 130 NPILSDLIGGVDTVTLGDEEARAR-RCQKSILERKAPPTFYFLIEMRER---HYWVTHKT 185
N L+ L+GG L +EE R R + +K++LER P F F+ E+ R H +V
Sbjct: 372 NQTLNLLVGGTAQAFLSNEERRLRNKLKKTVLERPYPSPFKFVAELNSRNTAHVYV--DV 429
Query: 186 EKSVDMLL 193
++VD LL
Sbjct: 430 NQAVDCLL 437
>gi|397568725|gb|EJK46301.1| hypothetical protein THAOC_35034 [Thalassiosira oceanica]
Length = 710
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/236 (38%), Positives = 131/236 (55%), Gaps = 32/236 (13%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRV------------------- 41
++ DLL +SIL +G PG GKTT++R+IA+ LSD +
Sbjct: 462 LIRDLLADDRSILLLGEPGSGKTTIVRDIAKELSDRANVFIGKWSTFPCLFGGSSLTSNP 521
Query: 42 --VIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 99
VDTSNEI GDG +PH +G +RRM VP Q VM+E ++NH PEV+++DEIG
Sbjct: 522 PHAAVDTSNEIAGDGGVPHPCVGMSRRMMVPSLRDQASVMVECLQNHTPEVMVIDEIGRG 581
Query: 100 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARR----- 154
E A ++ RGV +I +AHG+ L +++KN L LIGG+ T T+GD EAR +
Sbjct: 582 REVEAAQTSKNRGVRMIASAHGD-LRSLMKNRELRGLIGGLATTTVGDMEARRMQKKTGG 640
Query: 155 --CQKSILERKAPPTFYFLIEMRE---RHYWVTHKTEKSVDMLLRGKTPLVEIRKR 205
QK + +R A P F +IE+R + + +VD +L+GKT V+ R R
Sbjct: 641 EILQKQVTQRAAAPIFETIIELRRGRLNEWHIIPDVATAVDAVLKGKTYDVQKRIR 696
>gi|30692846|ref|NP_849744.1| putative stage III sporulation protein AA [Arabidopsis thaliana]
gi|110737929|dbj|BAF00902.1| hypothetical protein [Arabidopsis thaliana]
gi|332193461|gb|AEE31582.1| putative stage III sporulation protein AA [Arabidopsis thaliana]
Length = 303
Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 66/88 (75%), Positives = 78/88 (88%)
Query: 137 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVDMLLRGK 196
IGG++TVTLGDEEARARR QKSILERKAPPTFYFLIEMRER YW+ H+TEKSVDMLLRG+
Sbjct: 216 IGGIETVTLGDEEARARRSQKSILERKAPPTFYFLIEMRERDYWIAHQTEKSVDMLLRGR 275
Query: 197 TPLVEIRKRDDRFNVVVDRWKTYDRHDI 224
P+VE+R+RD+ + VV++RWK YD I
Sbjct: 276 NPMVEVRRRDEEYKVVIERWKAYDGQGI 303
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/62 (95%), Positives = 62/62 (100%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M+YDLLHYGKSILFVGRPGVGKTTV+REIARVLSDEFQKRVVI+DTSNEIGGDGDIPHSA
Sbjct: 156 MLYDLLHYGKSILFVGRPGVGKTTVLREIARVLSDEFQKRVVIIDTSNEIGGDGDIPHSA 215
Query: 61 IG 62
IG
Sbjct: 216 IG 217
>gi|218297092|ref|ZP_03497763.1| AAA ATPase [Thermus aquaticus Y51MC23]
gi|218242506|gb|EED09044.1| AAA ATPase [Thermus aquaticus Y51MC23]
Length = 319
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 123/197 (62%), Gaps = 18/197 (9%)
Query: 5 LLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTA 64
LL SIL VG P GKTT++R++ R+L++ + RV++VDTSNEIGGDG IPH I A
Sbjct: 122 LLDGQGSILLVGPPRTGKTTLLRDVVRILAERWGSRVLVVDTSNEIGGDGLIPHPGIRPA 181
Query: 65 RRMQVPEP--SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 122
RRMQVP+P Q +++ +A+ NH PE+++VDEIG + + C + + RGV ++ TAHGE
Sbjct: 182 RRMQVPDPPAKTQGRIIYQAIANHSPEIVVVDEIGYNEDVYECLTASRRGVRVVATAHGE 241
Query: 123 WLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVT 182
L ++++NP L + LGD + +AR ER++ P+F +++ + +V
Sbjct: 242 KLLDVLENPALHPV--------LGDPDLKAR-------ERRSRPSFQMALQVVGKGRFVL 286
Query: 183 HK-TEKSVDMLLRGKTP 198
+ K++D LL G P
Sbjct: 287 YPDLAKALDELLEGNEP 303
>gi|154341757|ref|XP_001566830.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134064155|emb|CAM40352.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 551
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/188 (46%), Positives = 123/188 (65%), Gaps = 7/188 (3%)
Query: 11 SILFVGRPGVGKTTVMREIARVLS-DEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 69
S+L + + G+GKTT++R++A L+ D RV +VDTSNEIGGDG IP +G RR+QV
Sbjct: 234 SLLILSKAGMGKTTLLRDLAAGLAQDPLTPRVTVVDTSNEIGGDGPIPLPYLGRCRRIQV 293
Query: 70 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 129
P Q +VMIE ++NH P+ +IVDEI TE EA A SI++RGV +IGT HGE LE +++
Sbjct: 294 PRREDQSRVMIEVIQNHTPDYLIVDEIATEEEAEAAWSISQRGVHMIGTCHGEHLEGLLQ 353
Query: 130 NPILSDLIGGVDTVTLGDEEARAR-RCQKSILERKAPPTFYFLIEMRER---HYWVTHKT 185
N L+ L+GG L +EE R R + +K++LER F F++E+ R H +V
Sbjct: 354 NRALNLLVGGAAQAFLSNEERRLRNKTKKTVLERPYNSPFSFVVELHARNRAHLYV--DV 411
Query: 186 EKSVDMLL 193
K+VD+ L
Sbjct: 412 NKAVDLAL 419
>gi|348667954|gb|EGZ07779.1| hypothetical protein PHYSODRAFT_529044 [Phytophthora sojae]
Length = 460
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/207 (41%), Positives = 118/207 (57%), Gaps = 12/207 (5%)
Query: 7 HYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARR 66
H KS+L +G PG GKTT++R++AR +S E + V I+DTSNEIGGDG +PH +G ARR
Sbjct: 247 HADKSVLVLGHPGSGKTTLIRDVARCVS-ETMENVCIIDTSNEIGGDGLVPHECVGWARR 305
Query: 67 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 126
M V Q VM+E V+NH E +IVDEIG AE A ++ +RG LI +AHG++
Sbjct: 306 MMVRSLEAQAGVMVECVQNHTVETLIVDEIGRRAEVLAASTVRQRGPRLIASAHGDF-RA 364
Query: 127 IIKNPILSDLIGGVDTVTLGDEEARARRCQKSI-LERKAPPTFYFLIEM------RERHY 179
++KNP L L+GG V +GD A + + +R P F ++E+ R R
Sbjct: 365 LLKNPDLKGLVGGSQQVIVGDSAAAQSASKSKLQTQRAGNPIFDVIVELDHVVRGRCRVI 424
Query: 180 WVTHKTEKSVDMLLRGKTPLVEIRKRD 206
W K+VD + G E R+ D
Sbjct: 425 W---DVAKAVDSVFEGNGYAFETRQWD 448
>gi|342181564|emb|CCC91044.1| conserved hypothetical protein [Trypanosoma congolense IL3000]
Length = 539
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 122/188 (64%), Gaps = 7/188 (3%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDEFQK-RVVIVDTSNEIGGDGDIPHSAIGTARRMQV 69
S+L V + GVGKTT++R++A LS E + RV+++DTSNEIGGD + +G RR+QV
Sbjct: 250 SVLIVSKAGVGKTTILRDLAASLSREPSRPRVMVIDTSNEIGGDSPVALPFLGRCRRVQV 309
Query: 70 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 129
P Q +VM + ++NH PE +IVDEI + AEA A SI++RGV LI T HGE L +++
Sbjct: 310 PRREAQQEVMRQVLQNHSPEYMIVDEITSAAEAEAAWSISQRGVHLIATCHGENLAGLLQ 369
Query: 130 NPILSDLIGGVDTVTLGDEEARAR-RCQKSILERKAPPTFYFLIEMRER---HYWVTHKT 185
N L+ L+GGV L +EE R R + +K++LER F+F++E+ R H +V
Sbjct: 370 NRSLNILVGGVAQAFLSNEERRLRNKVKKTVLERPNSSPFHFVVELTSRKCAHLYV--DV 427
Query: 186 EKSVDMLL 193
++VD LL
Sbjct: 428 NEAVDCLL 435
>gi|384432170|ref|YP_005641529.1| AAA ATPase [Thermus thermophilus SG0.5JP17-16]
gi|333967638|gb|AEG34402.1| AAA ATPase [Thermus thermophilus SG0.5JP17-16]
Length = 310
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 119/197 (60%), Gaps = 18/197 (9%)
Query: 5 LLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTA 64
LL G S+L VG P GKTT++R+I R+L++ + RVV+VDTSNEIGGDG H I A
Sbjct: 122 LLESGGSLLVVGPPRTGKTTLLRDIVRILAERWGPRVVVVDTSNEIGGDGLTAHPGIRPA 181
Query: 65 RRMQVPEPSL--QHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 122
RRMQVP+P Q +++ +A+ NH PEV++VDEIG + C + + RGV ++ TAHGE
Sbjct: 182 RRMQVPDPPSRNQGRIIYQAIANHSPEVVVVDEIGYNEDVQECLTASRRGVRVVATAHGE 241
Query: 123 WLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRER-HYWV 181
L ++++NP L ++G D +E R R+ P+F +++ + Y V
Sbjct: 242 RLLDVLENPALHPVLGEPDL-----KEGR----------RRTRPSFGTALQVVAKGRYLV 286
Query: 182 THKTEKSVDMLLRGKTP 198
+++D LL+G+ P
Sbjct: 287 YPDLAQALDDLLQGREP 303
>gi|386361866|ref|YP_006061707.1| hypothetical protein [Thermus thermophilus JL-18]
gi|383510893|gb|AFH40323.1| hypothetical protein TtJL18_2503 [Thermus thermophilus JL-18]
Length = 310
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 118/197 (59%), Gaps = 18/197 (9%)
Query: 5 LLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTA 64
LL G S+L VG P GKTT++R+I R+L++++ RVV+VDTSNEIGGDG H I A
Sbjct: 122 LLESGGSLLVVGPPRTGKTTLLRDIVRILAEKWGPRVVVVDTSNEIGGDGLTAHPGIRPA 181
Query: 65 RRMQVPEPSL--QHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 122
RRMQVP+P Q +++ +A+ NH PEV++VDEIG + C + + RGV ++ TAHGE
Sbjct: 182 RRMQVPDPPSRNQGRIIYQAIANHSPEVVVVDEIGYNEDVQECLTASRRGVRVVATAHGE 241
Query: 123 WLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRER-HYWV 181
L + ++NP L ++G D E R R+ P+F +++ + Y V
Sbjct: 242 RLLDALENPALHPVLGEPDL-----REGR----------RRTRPSFGTALQVVAKGRYLV 286
Query: 182 THKTEKSVDMLLRGKTP 198
+++D LL+G+ P
Sbjct: 287 YPDLAQALDDLLQGREP 303
>gi|348667950|gb|EGZ07775.1| hypothetical protein PHYSODRAFT_529219 [Phytophthora sojae]
Length = 397
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/207 (40%), Positives = 117/207 (56%), Gaps = 12/207 (5%)
Query: 7 HYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARR 66
H KS+L +G G GKTT++R++AR +S E + V I+DTSNEIGGDG +PH +G ARR
Sbjct: 185 HADKSVLVLGHSGSGKTTLIRDVARCVS-ETMENVCIIDTSNEIGGDGLVPHECVGWARR 243
Query: 67 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 126
M V Q VM+E V+NH E +IVDEIG AE A ++ +RG LI +AHG++
Sbjct: 244 MMVRSLEAQAGVMVECVQNHTVETLIVDEIGRRAEVLAASTVRQRGPRLIASAHGDF-RA 302
Query: 127 IIKNPILSDLIGGVDTVTLGDEEARARRCQKSI-LERKAPPTFYFLIEM------RERHY 179
++KNP L L+GG V +GD A + + +R P F ++E+ R R
Sbjct: 303 LLKNPDLKGLVGGSQQVIVGDSAAAQSASKSKLQTQRAGNPIFDVIVELDHVVRGRCRVI 362
Query: 180 WVTHKTEKSVDMLLRGKTPLVEIRKRD 206
W K+VD + G E R+ D
Sbjct: 363 W---DVAKAVDSVFEGNGYAFETRQWD 386
>gi|72390323|ref|XP_845456.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62359508|gb|AAX79944.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70801991|gb|AAZ11897.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 470
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 120/188 (63%), Gaps = 7/188 (3%)
Query: 11 SILFVGRPGVGKTTVMREIARVLS-DEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 69
S+L + + G+GKTT++R++A LS D + RV++VDTSNEIGGD +P +G RR+QV
Sbjct: 188 SVLILSKAGMGKTTILRDLAASLSRDPAKPRVMVVDTSNEIGGDSPMPLPFLGRCRRIQV 247
Query: 70 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 129
P Q +VM + ++NH PE +IVDE+ T AEA SI++RGV L+ T HGE L +++
Sbjct: 248 PRREEQQEVMKQILQNHSPEYVIVDEVSTTAEAEVTWSISQRGVHLVATCHGESLAGLLQ 307
Query: 130 NPILSDLIGGVDTVTLGDEEARAR-RCQKSILERKAPPTFYFLIEMRER---HYWVTHKT 185
N L+ L+GG L +EE R R + +K+ILER F F++E+ R H +V
Sbjct: 308 NQSLNLLVGGTAHAFLSNEERRLRNKIKKTILERPHSSPFKFVVELHSRKFAHLYV--DV 365
Query: 186 EKSVDMLL 193
++VD LL
Sbjct: 366 NQAVDCLL 373
>gi|261328858|emb|CBH11836.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 531
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 120/188 (63%), Gaps = 7/188 (3%)
Query: 11 SILFVGRPGVGKTTVMREIARVLS-DEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 69
S+L + + G+GKTT++R++A LS D + RV++VDTSNEIGGD +P +G RR+QV
Sbjct: 249 SVLILSKAGMGKTTILRDLAASLSRDPAKPRVMVVDTSNEIGGDSPMPLPFLGRCRRIQV 308
Query: 70 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 129
P Q +VM + ++NH PE +IVDE+ T AEA SI++RGV L+ T HGE L +++
Sbjct: 309 PRREEQQEVMKQILQNHSPEYVIVDEVSTTAEAEVTWSISQRGVHLVATCHGESLAGLLQ 368
Query: 130 NPILSDLIGGVDTVTLGDEEARAR-RCQKSILERKAPPTFYFLIEMRER---HYWVTHKT 185
N L+ L+GG L +EE R R + +K+ILER F F++E+ R H +V
Sbjct: 369 NQSLNLLVGGTAHAFLSNEERRLRNKIKKTILERPHSSPFKFVVELHSRKFAHLYV--DV 426
Query: 186 EKSVDMLL 193
++VD LL
Sbjct: 427 NQAVDCLL 434
>gi|407416930|gb|EKF37845.1| hypothetical protein MOQ_001953 [Trypanosoma cruzi marinkellei]
Length = 539
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/221 (40%), Positives = 130/221 (58%), Gaps = 13/221 (5%)
Query: 5 LLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQK-RVVIVDTSNEIGGDGDIPHSAIGT 63
L H G S+L + + G+GKTT++R++A LS E K RV++VDTSNEIGGD IP +G
Sbjct: 244 LAHKG-SVLILSKAGIGKTTLLRDLAASLSREPSKPRVIVVDTSNEIGGDCPIPLPFLGR 302
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 123
RR+QV Q ++M + ++NH PE ++VDEI T +EA A S+ +RGV LI T HGE
Sbjct: 303 CRRVQVSRREDQGQIMTQILQNHSPEYVVVDEIATASEAEAAWSMTQRGVHLIATCHGEN 362
Query: 124 LENIIKNPILSDLIGGVDTVTLGDEEARAR-RCQKSILERKAPPTFYFLIEMRERHYW-V 181
L +++N L+ L+GG L +EE R R + +K+ILER F F++E+ R+ V
Sbjct: 363 LHGLLQNQSLNLLVGGAAQAFLSNEERRLRNKSKKTILERPHLSPFRFVVELNSRNKAHV 422
Query: 182 THKTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTYDRH 222
+VD+LL +D + N V + DRH
Sbjct: 423 YTDVNTAVDLLL---------DDQDAKQNASVGQTVVLDRH 454
>gi|71420679|ref|XP_811568.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70876244|gb|EAN89717.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 539
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/221 (40%), Positives = 130/221 (58%), Gaps = 13/221 (5%)
Query: 5 LLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQK-RVVIVDTSNEIGGDGDIPHSAIGT 63
L H G S+L + + G+GKTT++R++A LS E K RV++VDTSNEIGGD IP +G
Sbjct: 244 LAHKG-SVLILSKAGIGKTTLLRDLAASLSREPSKPRVIVVDTSNEIGGDCPIPLPFLGR 302
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 123
RR+QV Q ++M + ++NH PE ++VDEI T +EA A S+ +RGV LI T HGE
Sbjct: 303 CRRVQVSRREDQGQIMTQILQNHSPEYVVVDEIATASEAEAAWSMTQRGVHLIATCHGEN 362
Query: 124 LENIIKNPILSDLIGGVDTVTLGDEEARAR-RCQKSILERKAPPTFYFLIEMRERH-YWV 181
L +++N L+ L+GG L +EE R R + +K+ILER F F++E+ R+ V
Sbjct: 363 LHGLLQNQSLNLLVGGAAQAFLSNEERRLRNKSKKTILERPHLSPFRFVVELNSRNKAHV 422
Query: 182 THKTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTYDRH 222
+VD+LL +D + N V + DRH
Sbjct: 423 YTDVNTAVDLLL---------DDQDAKQNASVGQTVVLDRH 454
>gi|71422331|ref|XP_812102.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70876843|gb|EAN90251.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 539
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 90/221 (40%), Positives = 130/221 (58%), Gaps = 13/221 (5%)
Query: 5 LLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQK-RVVIVDTSNEIGGDGDIPHSAIGT 63
L H G S+L + + G+GKTT++R++A LS E K RV++VDTSNEIGGD IP +G
Sbjct: 244 LAHKG-SVLILSKAGIGKTTLLRDLAASLSREPSKPRVIVVDTSNEIGGDCPIPLPFLGR 302
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 123
RR+QV Q ++M + ++NH PE ++VDEI T +EA A S+ +RGV LI T HGE
Sbjct: 303 CRRVQVSRREDQGQIMTQILQNHSPEYVVVDEIATASEAEAAWSMTQRGVHLIATCHGEN 362
Query: 124 LENIIKNPILSDLIGGVDTVTLGDEEARAR-RCQKSILERKAPPTFYFLIEMRERHYW-V 181
L +++N L+ L+GG L +EE R R + +K+ILER F F++E+ R+ V
Sbjct: 363 LHGLLQNQSLNLLVGGAAQAFLSNEERRLRNKSKKTILERPHLSPFRFVVELNSRNKAHV 422
Query: 182 THKTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTYDRH 222
+VD+LL +D + N V + DRH
Sbjct: 423 YTDVNTAVDLLL---------DDQDAKQNASVGQTVVLDRH 454
>gi|407852006|gb|EKG05683.1| hypothetical protein TCSYLVIO_003242 [Trypanosoma cruzi]
Length = 539
Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 90/221 (40%), Positives = 130/221 (58%), Gaps = 13/221 (5%)
Query: 5 LLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQK-RVVIVDTSNEIGGDGDIPHSAIGT 63
L H G S+L + + G+GKTT++R++A LS E K RV++VDTSNEIGGD IP +G
Sbjct: 244 LAHKG-SVLILSKAGIGKTTLLRDLAASLSREPSKPRVIVVDTSNEIGGDCPIPLPFLGR 302
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 123
RR+QV Q ++M + ++NH PE ++VDEI T +EA A S+ +RGV LI T HGE
Sbjct: 303 CRRVQVSRREDQGQIMTQILQNHSPEYVVVDEIATASEAEAAWSMTQRGVHLIATCHGEN 362
Query: 124 LENIIKNPILSDLIGGVDTVTLGDEEARAR-RCQKSILERKAPPTFYFLIEMRERH-YWV 181
L +++N L+ L+GG L +EE R R + +K+ILER F F++E+ R+ V
Sbjct: 363 LHGLLQNQSLNLLVGGAAHAFLSNEERRLRNKSKKTILERPHLSPFRFVVELNSRNKAHV 422
Query: 182 THKTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTYDRH 222
+VD+LL +D + N V + DRH
Sbjct: 423 YTDVNTAVDLLL---------DDQDAKQNASVGQTVVLDRH 454
>gi|291294925|ref|YP_003506323.1| AAA ATPase [Meiothermus ruber DSM 1279]
gi|290469884|gb|ADD27303.1| AAA ATPase [Meiothermus ruber DSM 1279]
Length = 318
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 114/191 (59%), Gaps = 20/191 (10%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 70
S+L VG P GKTT++R+I R+L+ + RV +VDTSNEIGGDG + H I ARR+QVP
Sbjct: 136 SLLVVGPPRTGKTTLLRDIVRILAGRYGPRVAVVDTSNEIGGDGKLTHPGISPARRLQVP 195
Query: 71 EPSLQHK--VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 128
+P +++ V+ +A+ NH PEV++ DEIG + C + + RGV ++ TAHGE + +++
Sbjct: 196 DPPSKNQGWVIYQAIANHSPEVVVADEIGYNEDVFQCLTASRRGVRVVATAHGETILDLL 255
Query: 129 KNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EK 187
+NP+L + LGD RR + P+F +E+R + +V + +
Sbjct: 256 ENPVLLPI--------LGDPVEGKRRSR---------PSFAMCLEVRGKGKFVLYPDFAE 298
Query: 188 SVDMLLRGKTP 198
++D LL G P
Sbjct: 299 ALDTLLAGGEP 309
>gi|297564982|ref|YP_003683954.1| AAA ATPase [Meiothermus silvanus DSM 9946]
gi|296849431|gb|ADH62446.1| AAA ATPase [Meiothermus silvanus DSM 9946]
Length = 322
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 114/191 (59%), Gaps = 20/191 (10%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 70
S+L VG P GKTT++R+I R+L+ + RV +VDTSNEIGGDG + H I ARR+QVP
Sbjct: 140 SLLVVGPPRTGKTTLLRDIVRILAGRYGPRVAVVDTSNEIGGDGKLTHPGISPARRLQVP 199
Query: 71 EPSLQHK--VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 128
+P +++ V+ +A+ NH PEV++ DEIG + C + + RGV ++ TAHGE + +++
Sbjct: 200 DPPSKNQGWVIYQAIANHSPEVVVADEIGYNEDVFQCLTASRRGVRVVATAHGETILDLL 259
Query: 129 KNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EK 187
+NP+L + LGD RR + P+F +E+R + +V + +
Sbjct: 260 ENPVLLPI--------LGDPGEGRRRSR---------PSFAMCLEVRGKGKFVLYPDFAE 302
Query: 188 SVDMLLRGKTP 198
++D LL G P
Sbjct: 303 ALDTLLTGGEP 313
>gi|339898849|ref|XP_001467056.2| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|321398540|emb|CAM70107.2| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 551
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/188 (46%), Positives = 123/188 (65%), Gaps = 7/188 (3%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDE-FQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 69
S+L + + G+GKTT++R++A L+ E RV +VDTSNEIGGDG IP +G RR+QV
Sbjct: 234 SLLILSKAGMGKTTLLRDLAAALAQEPGTPRVTVVDTSNEIGGDGPIPLPYLGRCRRIQV 293
Query: 70 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 129
Q +VM+E ++NH PE +IVDEI TE EA A SI++RGV LIGT HGE LE +++
Sbjct: 294 ARREDQGRVMMEVIQNHTPEYLIVDEIATEEEAEAAWSISQRGVHLIGTCHGEHLEGLLQ 353
Query: 130 NPILSDLIGGVDTVTLGDEEARAR-RCQKSILERKAPPTFYFLIEMRER---HYWVTHKT 185
N L+ L+GG L +EE R R + +K++LER F FL+E+ R H +V
Sbjct: 354 NRALNLLVGGAAQAFLSNEERRLRNKTKKTVLERPYSSPFSFLVELHARNRGHLYV--DV 411
Query: 186 EKSVDMLL 193
K+VD++L
Sbjct: 412 NKAVDLVL 419
>gi|398019514|ref|XP_003862921.1| hypothetical protein, conserved [Leishmania donovani]
gi|322501152|emb|CBZ36230.1| hypothetical protein, conserved [Leishmania donovani]
Length = 551
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/188 (46%), Positives = 123/188 (65%), Gaps = 7/188 (3%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDE-FQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 69
S+L + + G+GKTT++R++A L+ E RV +VDTSNEIGGDG IP +G RR+QV
Sbjct: 234 SLLILSKAGMGKTTLLRDLAAALAQEPGTPRVTVVDTSNEIGGDGPIPLPYLGRCRRIQV 293
Query: 70 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 129
Q +VM+E ++NH PE +IVDEI TE EA A SI++RGV LIGT HGE LE +++
Sbjct: 294 ARREDQGRVMMEVIQNHTPEYLIVDEIATEEEAEAAWSISQRGVHLIGTCHGEHLEGLLQ 353
Query: 130 NPILSDLIGGVDTVTLGDEEARAR-RCQKSILERKAPPTFYFLIEMRER---HYWVTHKT 185
N L+ L+GG L +EE R R + +K++LER F FL+E+ R H +V
Sbjct: 354 NRALNLLVGGAAQAFLSNEERRLRNKTKKTVLERPYSSPFSFLVELHARNRGHLYV--DV 411
Query: 186 EKSVDMLL 193
K+VD++L
Sbjct: 412 NKAVDLVL 419
>gi|157872545|ref|XP_001684813.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68127883|emb|CAJ06408.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 551
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/188 (46%), Positives = 124/188 (65%), Gaps = 7/188 (3%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDE-FQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 69
S+L + + G+GKTT++R++A L+ E RV +VDTSNEIGGDG IP +G RR+QV
Sbjct: 234 SLLILSKAGMGKTTLLRDLAAALAQEPGTPRVTVVDTSNEIGGDGPIPLPYLGRCRRIQV 293
Query: 70 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 129
+ Q +VM+E ++NH PE +IVDEI TE EA A SI++RGV LIGT HGE LE +++
Sbjct: 294 AQRQDQGRVMMEVIQNHTPEYLIVDEIATEEEAEAAWSISQRGVHLIGTCHGEHLEGLLQ 353
Query: 130 NPILSDLIGGVDTVTLGDEEARAR-RCQKSILERKAPPTFYFLIEMRER---HYWVTHKT 185
N L+ L+GG L +EE R R + +K++LER F F++E+ R H +V
Sbjct: 354 NRALNLLVGGAAQAFLSNEERRLRNKMKKTVLERPYSSPFSFVVELHARNLGHLYV--DV 411
Query: 186 EKSVDMLL 193
K+VD++L
Sbjct: 412 NKAVDLVL 419
>gi|401425735|ref|XP_003877352.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322493597|emb|CBZ28886.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 550
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/188 (46%), Positives = 123/188 (65%), Gaps = 7/188 (3%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDE-FQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 69
S+L + + G+GKTT++R++A L+ E RV +VDTSNEIGGDG IP +G RR+QV
Sbjct: 234 SLLILSKAGMGKTTLLRDLAAALAQEPGAPRVTVVDTSNEIGGDGPIPLPYLGRCRRIQV 293
Query: 70 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 129
Q +VM+E ++NH PE +IVDEI TE EA A SI++RGV LIGT HGE LE +++
Sbjct: 294 ARREDQGRVMMEVIQNHTPEYLIVDEIATEEEAEAAWSISQRGVHLIGTCHGEHLEGLLQ 353
Query: 130 NPILSDLIGGVDTVTLGDEEARAR-RCQKSILERKAPPTFYFLIEMRER---HYWVTHKT 185
N L+ L+GG L +EE R R + +K++LER F F++E+ R H +V
Sbjct: 354 NRALNLLVGGAAQAFLSNEERRLRNKTRKTVLERPYSSPFSFVVELHGRSRGHLYV--DV 411
Query: 186 EKSVDMLL 193
K+VD++L
Sbjct: 412 NKAVDLVL 419
>gi|297567949|ref|YP_003686919.1| AAA ATPase [Meiothermus silvanus DSM 9946]
gi|296852398|gb|ADH65411.1| AAA ATPase [Meiothermus silvanus DSM 9946]
Length = 386
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 113/207 (54%), Gaps = 25/207 (12%)
Query: 2 VYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAI 61
V L +L +G PGVGKTT +R++ R + + +VV+VDTSNEIGG+G +PH +
Sbjct: 119 VMPYLLQADGVLIIGPPGVGKTTFLRDVVRQYAQQIGPKVVVVDTSNEIGGEGLVPHPTL 178
Query: 62 GTARRMQVPEPS---------LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERG 112
G+ARR+QVP P+ + + +EA+ NH P+VI+ DE+G + +I +RG
Sbjct: 179 GSARRLQVPTPNYAIGETFQMMLARTYLEALANHGPQVIVGDEVGYPEDVAVVETIGKRG 238
Query: 113 VMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLI 172
+ I T HG L ++++NP+L LIG D ARR R+ P F +
Sbjct: 239 IKGIVTVHGRTLRDVLENPVLWPLIGRPDL--------PARR-------RQGRPVFSMAL 283
Query: 173 EMRER-HYWVTHKTEKSVDMLLRGKTP 198
E+R + + V ++D LL+G P
Sbjct: 284 EVRGKGRFAVYPDLAGAIDTLLQGGQP 310
>gi|320450693|ref|YP_004202789.1| AAA ATPase [Thermus scotoductus SA-01]
gi|320150862|gb|ADW22240.1| AAA ATPase [Thermus scotoductus SA-01]
Length = 316
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 87/131 (66%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 70
S+L +G PGVGKTT++R I + + R+VIVDTSNEI GDG +PH IG+ARRM V
Sbjct: 133 SVLIIGPPGVGKTTLLRGIVEEKAKVLKARLVIVDTSNEIAGDGTVPHPIIGSARRMMVG 192
Query: 71 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 130
+P Q ++++A+ NH PE I+VDEIG + + RGV ++ T HGE L ++++N
Sbjct: 193 DPRKQASIIMQAITNHSPETIVVDEIGYHDDVAVLETARRRGVDIVATVHGEDLIDVLEN 252
Query: 131 PILSDLIGGVD 141
P+L L+G D
Sbjct: 253 PVLKPLLGYPD 263
>gi|260804927|ref|XP_002597339.1| hypothetical protein BRAFLDRAFT_66476 [Branchiostoma floridae]
gi|229282602|gb|EEN53351.1| hypothetical protein BRAFLDRAFT_66476 [Branchiostoma floridae]
Length = 2613
Score = 109 bits (273), Expect = 8e-22, Method: Composition-based stats.
Identities = 62/168 (36%), Positives = 92/168 (54%), Gaps = 8/168 (4%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
+++D++ G S L +G P G+TT++RE ARVLSD +RV++VDT EI G DIPH
Sbjct: 2397 LLWDVVTSGTSTLIMGCPCSGRTTLLREWARVLSDVCYRRVIVVDTLKEIAGGDDIPHPG 2456
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARR+QV Q + A NH P+ IIVDE+ T+ E A ++I G+ ++
Sbjct: 2457 IGGARRVQVHNRCDQVSQLQTAARNHSPDCIIVDEVQTQEEVTALQAIRLTGIQVVAGVC 2516
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTF 168
L ++++N ++ L+G DT + Q PPTF
Sbjct: 2517 AGCLTDLLQNSVMRGLLGLSDTASTFP--------QTPSTSESVPPTF 2556
Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats.
Identities = 53/108 (49%), Positives = 71/108 (65%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
+++D++ G S L +GRP GKTT++RE ARVLSD +RV++VDT NEI G DIPH
Sbjct: 1544 LLWDVVTSGTSTLIMGRPCSGKTTLLREWARVLSDVCYRRVIVVDTRNEIAGGDDIPHPG 1603
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSI 108
IG ARR+QV Q + A NH P+ IIVDE+ T+ E A ++I
Sbjct: 1604 IGGARRVQVHNRCDQVFQLQTAARNHSPDCIIVDEVQTQEEVTALQAI 1651
>gi|260804935|ref|XP_002597343.1| hypothetical protein BRAFLDRAFT_66479 [Branchiostoma floridae]
gi|229282606|gb|EEN53355.1| hypothetical protein BRAFLDRAFT_66479 [Branchiostoma floridae]
Length = 3045
Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats.
Identities = 69/207 (33%), Positives = 104/207 (50%), Gaps = 3/207 (1%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
+++D++ G S L +GRP GKTT++RE ARVLSD +RV++VDT EI G DI H
Sbjct: 2830 LLWDVVTSGTSTLIIGRPCSGKTTLLREWARVLSDVCYRRVIVVDTLKEIAGGDDITHPG 2889
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
IG ARR+QV Q + A NH P+ IIVDE+ T+ E A ++I G+ ++
Sbjct: 2890 IGGARRVQVHNRCDQVFQLQTAARNHSPDFIIVDEVQTQEEVTALQAIRLTGIQVVAGVC 2949
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
L +++ N ++ L+G D + + + P F + + R
Sbjct: 2950 AGCLPDLLHNSVMRGLLGLSDPASTFPQTPSTSESVPPAFPQTL-PVFQAAVVIHSRDMV 3008
Query: 181 VTHKTEKSVDM--LLRGKTPLVEIRKR 205
+ S LL G+ PL + RKR
Sbjct: 3009 SVYSDVASFVRVSLLEGRFPLAQQRKR 3035
>gi|313667305|ref|YP_004049706.1| AAA ATPase central domain protein [Oceanithermus profundus DSM
14977]
gi|313153936|gb|ADR37786.1| AAA ATPase central domain protein [Oceanithermus profundus DSM
14977]
Length = 345
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 98/171 (57%), Gaps = 3/171 (1%)
Query: 4 DLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGT 63
+LL S+L VG PG GKTT++R +A +D + I+DTSNEIGG G+ P +
Sbjct: 123 ELLRSKGSVLIVGAPGSGKTTLLRAVAAAFADAIGPHLNIIDTSNEIGGVGETPIHELRH 182
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 123
AR QVP P+ Q +V+ A+ NH P V+I+DE+G + + A RGV +I T HG
Sbjct: 183 ARWHQVPNPAKQPEVIRRAIANHGPLVLILDEVGYHGDVPEVEAAARRGVQVIATVHGYG 242
Query: 124 LENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEM 174
+ ++I+N S L+G D L AR +S+LE +A FY+L ++
Sbjct: 243 IFDVIENAHYSPLLGHPD---LNSRVRLARPAFQSLLEVRAKGKFYWLPDL 290
>gi|326516068|dbj|BAJ88057.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 160
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 64/88 (72%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ DL+ G S+L +G GV KT V+REIAR+L+D++ KRV+IVDTSNEI GDGDIPH
Sbjct: 48 LLQDLVKAGGSLLLIGPLGVWKTIVIREIARMLADDYDKRVMIVDTSNEIAGDGDIPHPG 107
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMP 88
IG ARR+QVP+ +QHKV +P
Sbjct: 108 IGNARRLQVPDQEMQHKVCSIEFNTLLP 135
>gi|298714683|emb|CBJ27608.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 354
Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 109/192 (56%), Gaps = 15/192 (7%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHS-AIGT-ARRMQ 68
SIL +GR G GKTT++R++ R LS + VVIVDT ++IGG G +PH AIG +RR+
Sbjct: 113 SILVLGRHGAGKTTLVRDMCRKLSS--HETVVIVDTRSDIGGAGVVPHRRAIGEESRRVM 170
Query: 69 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 128
VP+ QH+V+++A NH P+ I+VDEI ++ + AC ++ RG+ ++ A G+ L ++
Sbjct: 171 VPQGMQQHEVILQAYRNHSPQTIVVDEISSQLDIEACMAVKARGIRVVAGAVGD-LPYVL 229
Query: 129 KNPILSDLIGGVDTVTLGDEEARARRCQKSILERKA-PPTFYFLIEMRER------HYWV 181
+P + +GG++ + A +ER+A P F ++E+ R V
Sbjct: 230 DSPEIGAALGGLEDIQ---RSANVDDDSDDQMERRAGSPVFEAVVELEGRAGGAAPQGAV 286
Query: 182 THKTEKSVDMLL 193
E VD LL
Sbjct: 287 VTNVEAVVDELL 298
>gi|308805324|ref|XP_003079974.1| sporulation protein-related (ISS) [Ostreococcus tauri]
gi|116058431|emb|CAL53620.1| sporulation protein-related (ISS), partial [Ostreococcus tauri]
Length = 173
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 59/85 (69%)
Query: 136 LIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVDMLLRG 195
L+GGV TVTLGD+EARAR CQKSILER+ PPTF LIEM ER WV H +SVD +L G
Sbjct: 2 LVGGVQTVTLGDDEARARGCQKSILERQGPPTFPILIEMHERDMWVAHNVAESVDEVLSG 61
Query: 196 KTPLVEIRKRDDRFNVVVDRWKTYD 220
P+V++R R+ + N V YD
Sbjct: 62 ARPVVQLRTRNAQTNEVSVHRTVYD 86
>gi|158421474|ref|YP_001527701.1| AAA ATPase [Deinococcus geothermalis DSM 11300]
gi|158342717|gb|ABW35003.1| AAA ATPase [Deinococcus geothermalis DSM 11300]
Length = 322
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 102/195 (52%), Gaps = 13/195 (6%)
Query: 5 LLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTA 64
+ + I +G P VGKTT++R+I R+ ++ +V++D+SNEI GDGD+PH +
Sbjct: 121 FVEQARGIAVIGPPAVGKTTLLRDITRIRAEVKSSGLVVIDSSNEITGDGDVPHPMLSRV 180
Query: 65 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 124
RR +V +P Q + A+ NH PE I++DE+G + S GV +I T HG +
Sbjct: 181 RRFKVGDPEQQAPKLRRAIRNHGPEEILMDEVGYNGDVPLLVSAVRLGVTVIATMHGRVV 240
Query: 125 ENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK 184
+++++NP L L+G G+ RA C F IE+ + ++ H+
Sbjct: 241 KDVLRNPPLLPLLGVAIDERTGELIKRADTC------------FGMAIEVHGKGKYLVHE 288
Query: 185 TEKSV-DMLLRGKTP 198
++V LL G+ P
Sbjct: 289 DLEAVTQALLCGEEP 303
>gi|386854327|ref|YP_006258707.1| AAA ATPase [Deinococcus gobiensis I-0]
gi|380002656|gb|AFD27843.1| AAA ATPase [Deinococcus gobiensis I-0]
Length = 314
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 100/205 (48%), Gaps = 19/205 (9%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++YD + I +G P GKTT++R+IAR+L++ +VI+DTSNEI GD D H
Sbjct: 125 VLYDAVTNEYGIAIIGPPAAGKTTLLRDIARILAERLGSGLVIIDTSNEIAGDSDHKHPI 184
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
+G ARR+ V P Q + A+ N P+ ++ DEIG + A RGV + T H
Sbjct: 185 VGQARRVPVGNPLWQGEKFARAIGNMGPKALLSDEIGYRDDIPVIAMNAPRGVSVTATLH 244
Query: 121 GEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW 180
G+ + + + L ++G D V + P F IE+ R ++
Sbjct: 245 GKNMRRVAHSQNLWPILGIKDGV------------------KTEPAVFKIAIEVPRRGFF 286
Query: 181 VTHKT-EKSVDMLLRGKTPLVEIRK 204
H+ + S+ LL G+ P IR+
Sbjct: 287 RVHEDFDASLKSLLAGEEPTEGIRE 311
>gi|325284450|ref|YP_004256990.1| AAA ATPase [Deinococcus proteolyticus MRP]
gi|324316514|gb|ADY27627.1| AAA ATPase [Deinococcus proteolyticus MRP]
Length = 316
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 95/189 (50%), Gaps = 19/189 (10%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 69
I VG P VGKTT++R+IAR++++ + +VI+DTSNEI GD DIPH IG AR + V
Sbjct: 136 SGIAIVGPPAVGKTTLLRDIARIMAERLAQGLVIIDTSNEIAGDSDIPHRIIGKARVVAV 195
Query: 70 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 129
P Q + + N P+ ++ DEIG + R A RGV + T HG+ + ++
Sbjct: 196 GNPLHQGEKFARVIGNMGPQALLSDEIGYRDDIPIIRQNAPRGVSITATLHGKNMVRVVN 255
Query: 130 NPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKS 188
+ L L+G + ++ P F IE+ R + H+ + S
Sbjct: 256 SENLWPLLGVIGR------------------QKVEPSVFAQAIEVIGRGRYRVHEDFDAS 297
Query: 189 VDMLLRGKT 197
++ +L GK
Sbjct: 298 IEAILAGKN 306
>gi|397565678|gb|EJK44725.1| hypothetical protein THAOC_36714 [Thalassiosira oceanica]
Length = 579
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 86/143 (60%), Gaps = 11/143 (7%)
Query: 73 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 132
S Q +VMIE V+NH P V+++DEIG E A ++ RGV +I +AHG+ L +++KN
Sbjct: 424 SKQSEVMIECVQNHTPSVMVIDEIGRRNEVEAAQTSKNRGVRMIASAHGD-LRSLLKNKE 482
Query: 133 LSDLIGGVDTVTLGDEEAR-------ARRCQKSILERKAPPTFYFLIEM---RERHYWVT 182
+ LIGG++T TLGD EA+ ++ +K++ R A P F +IE+ R + +
Sbjct: 483 IRGLIGGLETTTLGDVEAKELQKKTGSKTLEKTLTTRAAAPIFEVIIELKRGRLNEWHIV 542
Query: 183 HKTEKSVDMLLRGKTPLVEIRKR 205
+ K+VD +LRG+ V+ R R
Sbjct: 543 SDSTKAVDAILRGEKYHVQKRMR 565
>gi|323452315|gb|EGB08189.1| hypothetical protein AURANDRAFT_71632 [Aureococcus anophagefferens]
Length = 1677
Score = 90.1 bits (222), Expect = 6e-16, Method: Composition-based stats.
Identities = 64/196 (32%), Positives = 102/196 (52%), Gaps = 25/196 (12%)
Query: 4 DLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVI-----VDTSNEIGGDGDIPH 58
D+L G+S+LF+G PG GK+T +R+ A ++ ++ + VD S E+GGDG H
Sbjct: 589 DVLRRGESVLFLGAPGAGKSTALRDAAALVGAYRERHAPVGDCWVVDQSLELGGDGLAAH 648
Query: 59 SAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGT 118
+++ A R +L H+ M+ + NH P I+VDE+ A A A + +RGV L+ +
Sbjct: 649 ASLRPAERYPCQGEAL-HEAMLRVLRNHTPAAIVVDELVDRAAALAAADVGKRGVQLLAS 707
Query: 119 AHGEW-----------LENIIKNPILSDLIGGVDTVTLGDEEARARRCQ------KSILE 161
AH W L ++ + L+ ++G + VTL D EA ARR + K +
Sbjct: 708 AHA-WEKGATSAHARSLAELVDDAALAPVLGDFEIVTLSDREA-ARRAKTQRDPRKVRRQ 765
Query: 162 RKAPPTFYFLIEMRER 177
R TF ++E+R R
Sbjct: 766 RVRNATFGCVVELRPR 781
>gi|260804937|ref|XP_002597344.1| hypothetical protein BRAFLDRAFT_66480 [Branchiostoma floridae]
gi|229282607|gb|EEN53356.1| hypothetical protein BRAFLDRAFT_66480 [Branchiostoma floridae]
Length = 1910
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 78/143 (54%), Gaps = 19/143 (13%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
+++D++ G S L +GRP GKTT++RE ARVLSD +RV++VDT NE+ H+
Sbjct: 1720 LLWDVVTSGTSTLIMGRPCSGKTTLLREWARVLSDVCYRRVIVVDTRNEV-------HNR 1772
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
++Q A NH P+ IIVDE+ T+ E A ++I G+ ++
Sbjct: 1773 CDQVSQLQT------------AARNHSPDCIIVDEVQTQEEVTALQAIRLTGIQVVAGVC 1820
Query: 121 GEWLENIIKNPILSDLIGGVDTV 143
L ++++N ++ L+G D V
Sbjct: 1821 AGCLTDLLQNSVMRGLLGLSDPV 1843
>gi|20807732|ref|NP_622903.1| stage III sporulation protein spoIIIAA [Thermoanaerobacter
tengcongensis MB4]
gi|254479690|ref|ZP_05092986.1| stage III sporulation protein AA [Carboxydibrachium pacificum DSM
12653]
gi|20516285|gb|AAM24507.1| stage III sporulation protein spoIIIAA [Thermoanaerobacter
tengcongensis MB4]
gi|214034376|gb|EEB75154.1| stage III sporulation protein AA [Carboxydibrachium pacificum DSM
12653]
Length = 330
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 77/134 (57%), Gaps = 7/134 (5%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGD-GDIPHSAIGTAR 65
++L + P GKTT++R+IAR LSD F K+V I+D +EI G +P +G
Sbjct: 158 NLLIISPPQCGKTTLLRDIARALSDGFMGFGGKKVCIIDERSEIAGCYNGVPQLNVGI-- 215
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + + + MI A+ + P+V++ DEIG + + A R + GV +I T H + +E
Sbjct: 216 RTDVLDRCPKAEGMIMAIRSMSPQVVVTDEIGKKEDIEALRHVLNAGVKIITTVHAKDIE 275
Query: 126 NIIKNPILSDLIGG 139
++ K P+L DL+ G
Sbjct: 276 DLKKRPLLKDLVEG 289
>gi|386854853|ref|YP_006262593.1| AAA ATPase [Deinococcus gobiensis I-0]
gi|380002330|gb|AFD27518.1| AAA ATPase [Deinococcus gobiensis I-0]
Length = 301
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 62/110 (56%)
Query: 12 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 71
++ +G PG GKT ++R++ R+L + R+ + D+SNEI GDG PHS R+ + +
Sbjct: 107 VIIIGLPGAGKTALLRDVNRILGERLAGRLFVCDSSNEILGDGIQPHSITDWLSRVPIGD 166
Query: 72 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 121
P LQ + V+N P ++VDE+ + +A A RGV ++ T H
Sbjct: 167 PKLQLSKLNMVVKNFQPRWMVVDEVSSPDDARAIGYARSRGVRVVMTWHA 216
>gi|105672147|gb|ABF74689.1| AAA [Lingulodinium polyedrum]
Length = 656
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 78/124 (62%), Gaps = 5/124 (4%)
Query: 1 MVYDLLHYG-KSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHS 59
M+ DLL S L +G G GKTTV R++AR+L++E + V++VDT+ E+GG G + HS
Sbjct: 436 MIGDLLAADLGSWLLLGPTGSGKTTVTRDVARLLAEE--RSVMVVDTARELGGAGVVAHS 493
Query: 60 AIGTARRMQVPEPSLQHKVMI-EAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGT 118
++G ARR+ V + + QH + EA+ +H EV++VD + ++ A R E G L+ +
Sbjct: 494 SLGLARRLLV-DSAEQHLAAVEEAILSHAAEVVVVDGMAVQSLISASRLAREHGACLVAS 552
Query: 119 AHGE 122
A G+
Sbjct: 553 AVGD 556
>gi|326500622|dbj|BAJ94977.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 220
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/42 (85%), Positives = 40/42 (95%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV 42
MV DLL+Y +SILF+GRPGVGKTTVMREIARVL+DEFQKRVV
Sbjct: 179 MVRDLLNYKESILFLGRPGVGKTTVMREIARVLADEFQKRVV 220
>gi|56964243|ref|YP_175974.1| stage III sporulation protein AA [Bacillus clausii KSM-K16]
gi|56910486|dbj|BAD65013.1| stage III sporulation protein AA [Bacillus clausii KSM-K16]
Length = 309
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 74/135 (54%), Gaps = 9/135 (6%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIG 62
++ L +G P GKTTV+R++AR++S +K +V IVD +EI G +P +G
Sbjct: 144 QNALLIGPPQTGKTTVLRDVARIVSTGSKKNHIPSCKVGIVDERSEIAGCVAGVPQHELG 203
Query: 63 TARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 122
R+ V + + + M+ + + P+V+IVDEIG E + A GV LI TAHG
Sbjct: 204 V--RVDVLDGCPKAEGMMMLIRSMSPDVLIVDEIGREEDVKAILEARHAGVSLIATAHGH 261
Query: 123 WLENIIKNPILSDLI 137
LE++ K P+ L
Sbjct: 262 TLEDVAKRPVFKGLF 276
>gi|188586330|ref|YP_001917875.1| stage III sporulation protein AA [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179351017|gb|ACB85287.1| stage III sporulation protein AA [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 322
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 74/131 (56%), Gaps = 8/131 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLS---DEFQK--RVVIVDTSNEIGGD-GDIPHSAIGTARR 66
L +G PG GKTT++R++ R+LS F + ++ ++D +EI G IP IG R
Sbjct: 150 LLIGPPGCGKTTILRDLTRLLSTGNKSFDRTFKITLIDERSEISGSVRGIPQKEIGL--R 207
Query: 67 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 126
V + + K M+ AV PE+I+ DEIGT+ + +A + GV L+ + HG+ E
Sbjct: 208 TDVLDGCPKAKGMMMAVRAMSPEIIVTDEIGTKEDINAVKEAMNSGVKLLLSIHGDSYET 267
Query: 127 IIKNPILSDLI 137
++K P + +L+
Sbjct: 268 LLKRPGIPELL 278
>gi|253682298|ref|ZP_04863095.1| stage III sporulation protein AA [Clostridium botulinum D str.
1873]
gi|253562010|gb|EES91462.1| stage III sporulation protein AA [Clostridium botulinum D str.
1873]
Length = 298
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 73/126 (57%), Gaps = 4/126 (3%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGD-IPHSAIGTARRMQVPE 71
+ + P GKTT++R+I+R LSD +K++ IVD +EIG + +P IG R V +
Sbjct: 141 IIISPPKCGKTTLLRDISRNLSDA-KKKICIVDERSEIGACFEGVPQMNIGL--RTDVFD 197
Query: 72 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 131
++ + +I A+ + PEVII DEIGT + + GV LI T HG +E++ + P
Sbjct: 198 NCVKSQGIIMAIRSMAPEVIICDEIGTYKDMESIIMAMNSGVNLITTIHGFGIEDLYRRP 257
Query: 132 ILSDLI 137
+ +++
Sbjct: 258 VFKEIL 263
>gi|414865049|tpg|DAA43606.1| TPA: hypothetical protein ZEAMMB73_327805 [Zea mays]
Length = 209
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/41 (85%), Positives = 39/41 (95%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRV 41
MV DLL+Y +SILF+GRPGVGKTTVMREIARVL+DEFQKRV
Sbjct: 167 MVRDLLNYKESILFLGRPGVGKTTVMREIARVLADEFQKRV 207
>gi|410722781|ref|ZP_11362034.1| stage III sporulation protein AA [Clostridium sp. Maddingley
MBC34-26]
gi|410603777|gb|EKQ58203.1| stage III sporulation protein AA [Clostridium sp. Maddingley
MBC34-26]
Length = 306
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 75/132 (56%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDG-DIPHSAIGTAR 65
+ + P GKTT++R+IAR +S+ K+VV+VD +EIG +P + +G
Sbjct: 142 IIISPPKCGKTTILRDIARNISNGMSILGLNGKKVVVVDERSEIGACHLGVPQTDLGL-- 199
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + L+ + +I A+ + PEV+I DEIGT+ + + GV +I T HG +E
Sbjct: 200 RTDVLDNCLKREGLIMAIRSLSPEVLICDEIGTQGDIESLIMAFNSGVNIITTIHGFTIE 259
Query: 126 NIIKNPILSDLI 137
++ K +LSDL+
Sbjct: 260 DLYKRKVLSDLL 271
>gi|403238245|ref|ZP_10916831.1| stage III sporulation protein AA [Bacillus sp. 10403023]
Length = 307
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 77/135 (57%), Gaps = 9/135 (6%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLSDEFQKRVV------IVDTSNEIGGD-GDIPHSAIG 62
K+ + +G P GKTT++R++AR++S Q + + IVD +EI G +P +++G
Sbjct: 137 KNTIIIGPPQTGKTTLLRDLARMISTGIQSKSIPAMKVGIVDERSEIAGCVKGVPQASLG 196
Query: 63 TARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 122
R+ V + + + M+ + + P+V+IVDEIG E ++ A GV LI TAHG
Sbjct: 197 P--RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGREEDSLAIMEAVNAGVSLIVTAHGH 254
Query: 123 WLENIIKNPILSDLI 137
+ +++K P L +I
Sbjct: 255 QISDLLKRPSLEKII 269
>gi|365157824|ref|ZP_09354069.1| stage III sporulation protein AA [Bacillus smithii 7_3_47FAA]
gi|363622494|gb|EHL73653.1| stage III sporulation protein AA [Bacillus smithii 7_3_47FAA]
Length = 309
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 75/135 (55%), Gaps = 9/135 (6%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIG 62
K + +G P GKTT++R+IARV+S + +V IVD +EI G IP + G
Sbjct: 137 KHTMIIGAPQTGKTTLLRDIARVVSTGCDQLNIPSLKVGIVDERSEIAGCMFGIPQLSFG 196
Query: 63 TARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 122
R+ V + + + M+ + + P+V++VDEIG E + A GV L+ T HG+
Sbjct: 197 P--RVDVLDACPKAEGMMMMIRSMSPDVLVVDEIGREEDRMAVLEAVNAGVKLVMTTHGD 254
Query: 123 WLENIIKNPILSDLI 137
LE I K P+L+D++
Sbjct: 255 SLEEIQKRPLLADIV 269
>gi|336114346|ref|YP_004569113.1| stage III sporulation protein AA [Bacillus coagulans 2-6]
gi|335367776|gb|AEH53727.1| stage III sporulation protein AA [Bacillus coagulans 2-6]
Length = 310
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 6 LHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQKR------VVIVDTSNEIGGD-GDI 56
LH G+ S + +G P GKTT +R+IAR++S +R V IVD +EI G I
Sbjct: 132 LHNGRWLSAMIIGAPQTGKTTFLRDIARLISSGIPERGISPAKVGIVDERSEIAGCVHGI 191
Query: 57 PHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLI 116
P G R+ V + + + M+ + + P+VI+VDEIG E +A A G+ L+
Sbjct: 192 PQLHFGP--RVDVLDACPKAEGMMMLIRSMSPDVIVVDEIGREEDAAAIMEAVNAGISLV 249
Query: 117 GTAHGEWLENIIKNPILSDLI 137
T HGE +I K PIL ++
Sbjct: 250 MTTHGENFRDIQKRPILKKIL 270
>gi|150016566|ref|YP_001308820.1| sporulation stage III, protein AA [Clostridium beijerinckii NCIMB
8052]
gi|149903031|gb|ABR33864.1| Sporulation stage III, protein AA [Clostridium beijerinckii NCIMB
8052]
Length = 306
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 73/132 (55%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEF------QKRVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ + P GKTT++R+IAR +S K+V ++D +EIG IP S +G
Sbjct: 142 IIISPPKCGKTTILRDIARNISSGMPSLGIAGKKVAVIDERSEIGACYFGIPQSDLGI-- 199
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + L+ + +I A+ + PEV+I DEIGT+ + A GV +I T HG +E
Sbjct: 200 RTDVLDNCLKREGLIMAIRSLSPEVLICDEIGTKGDIEALIMAFNSGVNIITTIHGFTIE 259
Query: 126 NIIKNPILSDLI 137
++ K +LSDL+
Sbjct: 260 DLYKRRVLSDLL 271
>gi|359412675|ref|ZP_09205140.1| stage III sporulation protein AA [Clostridium sp. DL-VIII]
gi|357171559|gb|EHI99733.1| stage III sporulation protein AA [Clostridium sp. DL-VIII]
Length = 309
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 74/132 (56%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGG-DGDIPHSAIGTAR 65
+ + P GKTT++R+IAR +S+ ++VV++D +EIG +P S +G
Sbjct: 145 IVISPPKCGKTTILRDIARNISNGVSSLGLNGRKVVVIDERSEIGACHFGVPQSDLGI-- 202
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + L+ + +I A+ + PEV+I DEIGT+ + A GV +I T HG +E
Sbjct: 203 RTDVLDNCLKREGLIMAIRSLSPEVLICDEIGTKGDIEALIMAFNSGVNIITTIHGFTIE 262
Query: 126 NIIKNPILSDLI 137
++ K +L DL+
Sbjct: 263 DLYKRKVLGDLL 274
>gi|347753237|ref|YP_004860802.1| stage III sporulation protein AA [Bacillus coagulans 36D1]
gi|347585755|gb|AEP02022.1| stage III sporulation protein AA [Bacillus coagulans 36D1]
Length = 308
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 74/141 (52%), Gaps = 11/141 (7%)
Query: 6 LHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQKR------VVIVDTSNEIGGD-GDI 56
LH G S + +G P GKTT +R+IAR++S +R V IVD +EI G I
Sbjct: 130 LHNGHWLSAMIIGAPQTGKTTFLRDIARLISTGIPERGISPAKVGIVDERSEIAGCVHGI 189
Query: 57 PHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLI 116
P G R+ V + + + M+ + + P+VIIVDEIG E +A A G+ L+
Sbjct: 190 PQLHFGP--RVDVLDACPKAEGMMMLIRSMSPDVIIVDEIGREEDAAAIMEAVNAGISLV 247
Query: 117 GTAHGEWLENIIKNPILSDLI 137
T HGE +I K PIL ++
Sbjct: 248 MTTHGENFRDINKRPILKKIL 268
>gi|384044940|ref|YP_005492957.1| stage III sporulation protein AA [Bacillus megaterium WSH-002]
gi|345442631|gb|AEN87648.1| Stage III sporulation protein AA [Bacillus megaterium WSH-002]
Length = 315
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 77/137 (56%), Gaps = 9/137 (6%)
Query: 8 YGKSILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSA 60
Y +S + +G P GKTT++R++ARV+S ++ +V IVD +EI G +P
Sbjct: 136 YWQSTVIIGPPQTGKTTMIRDLARVISTGIERSKIPPFKVGIVDERSEIAGAVKGVPQHT 195
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
G+ RM + + + + M+ + + P+V+IVDE+G+E + A GV +I T H
Sbjct: 196 FGS--RMDLLDSCPKAEGMMMMIRSMSPDVLIVDEVGSEEDCKAVLEAVNAGVRVIMTVH 253
Query: 121 GEWLENIIKNPILSDLI 137
G +++++K P L L+
Sbjct: 254 GYDIDDLMKRPTLQALM 270
>gi|294501214|ref|YP_003564914.1| stage III sporulation protein AA [Bacillus megaterium QM B1551]
gi|295706561|ref|YP_003599636.1| stage III sporulation protein AA [Bacillus megaterium DSM 319]
gi|294351151|gb|ADE71480.1| stage III sporulation protein AA [Bacillus megaterium QM B1551]
gi|294804220|gb|ADF41286.1| stage III sporulation protein AA [Bacillus megaterium DSM 319]
Length = 315
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 77/137 (56%), Gaps = 9/137 (6%)
Query: 8 YGKSILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSA 60
Y +S + +G P GKTT++R++ARV+S ++ +V IVD +EI G +P
Sbjct: 136 YWQSTVIIGPPQTGKTTMIRDLARVISTGIERSKIPPFKVGIVDERSEIAGAVKGVPQHT 195
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
G+ RM + + + + M+ + + P+V+IVDE+G+E + A GV +I T H
Sbjct: 196 FGS--RMDLLDSCPKAEGMMMMIRSMSPDVLIVDEVGSEEDCKAVLEAVNAGVRVIMTVH 253
Query: 121 GEWLENIIKNPILSDLI 137
G +++++K P L L+
Sbjct: 254 GYDIDDLMKRPTLQALM 270
>gi|212638773|ref|YP_002315293.1| stage III sporulation protein AA [Anoxybacillus flavithermus WK1]
gi|212560253|gb|ACJ33308.1| Stage III sporulation protein AA (mutants block sporulation after
engulfment) [Anoxybacillus flavithermus WK1]
Length = 313
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 73/132 (55%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R+IAR++S ++V IVD +EI G IP G
Sbjct: 146 VIIGAPQTGKTTLLRDIARIVSSGVTEQHIAPRKVGIVDERSEIAGCVKGIPQFTFGC-- 203
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+V+IVDEIG+EA+ A G+ L TAHG L+
Sbjct: 204 RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGSEADCTAILEAVHAGIGLFMTAHGRHLD 263
Query: 126 NIIKNPILSDLI 137
+++K P L +I
Sbjct: 264 DLMKRPSLRPII 275
>gi|331269432|ref|YP_004395924.1| stage III sporulation protein AA [Clostridium botulinum BKT015925]
gi|329125982|gb|AEB75927.1| stage III sporulation protein AA [Clostridium botulinum BKT015925]
Length = 319
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 73/126 (57%), Gaps = 4/126 (3%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGD-IPHSAIGTARRMQVPE 71
+ + P GKTT++R+I+R LSD +K++ IVD +E+G + +P +G R V +
Sbjct: 162 IIISPPKCGKTTLIRDISRNLSDA-KKKICIVDERSEVGACFEGVPQMNVGL--RTDVFD 218
Query: 72 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 131
++ + +I A+ + PE+I+ DEIGT + + GV LI T HG +E++ + P
Sbjct: 219 NCVKSEGIIMAIRSMAPEIIVCDEIGTYKDMESIIMAMNSGVNLITTIHGFGIEDLYRRP 278
Query: 132 ILSDLI 137
+ +++
Sbjct: 279 VFKEIL 284
>gi|429765574|ref|ZP_19297859.1| stage III sporulation protein AA [Clostridium celatum DSM 1785]
gi|429186025|gb|EKY26988.1| stage III sporulation protein AA [Clostridium celatum DSM 1785]
Length = 329
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGTAR 65
L V P GKTT++R+IAR +S+ K+V IVD +EI G + IP +G
Sbjct: 163 LIVSPPKCGKTTILRDIARNISNGMYSLNLRGKKVTIVDERSEIAGCYNGIPQMNVGV-- 220
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + L+ MI A+ + PEV+I DEIGTE + A GV +I T HG +
Sbjct: 221 RTDVLDNCLKRIGMIMAIRSLSPEVLICDEIGTEGDLEALNMAFNSGVNIIVTVHGNDIN 280
Query: 126 NIIKNPILSDLI 137
+I + LI
Sbjct: 281 DIYGREMFRKLI 292
>gi|433444521|ref|ZP_20409393.1| stage III sporulation protein AA [Anoxybacillus flavithermus
TNO-09.006]
gi|432001549|gb|ELK22424.1| stage III sporulation protein AA [Anoxybacillus flavithermus
TNO-09.006]
Length = 307
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 73/132 (55%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R+IAR++S ++V IVD +EI G IP G
Sbjct: 140 IIIGAPQTGKTTLLRDIARIVSGGVTEQHIAPRKVGIVDERSEIAGCVKGIPQFTFGC-- 197
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+V++VDEIG+EA+ A GV L TAHG L+
Sbjct: 198 RVDVLDACPKAEGMMMMIRSMSPDVLVVDEIGSEADCTAILEAVHAGVGLFMTAHGRHLD 257
Query: 126 NIIKNPILSDLI 137
+++K P L +I
Sbjct: 258 DLMKRPSLRPII 269
>gi|297544559|ref|YP_003676861.1| stage III sporulation protein AA [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296842334|gb|ADH60850.1| stage III sporulation protein AA [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 332
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 9/134 (6%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGT 63
+IL + P GKTT++R+IAR +S+ K+V IVD +EI G + IP +G
Sbjct: 158 NILIISPPQCGKTTLLRDIARWISNGIDFLGFTGKKVGIVDERSEIAGCYNGIPQLDVGI 217
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 123
R V + + MI + + P+V++ DEIG + + A + GV +I T H
Sbjct: 218 --RTDVLDGCPKAHGMIMLIRSMSPQVVVTDEIGRKEDIEAIHEVLNTGVKIITTVHAND 275
Query: 124 LENIIKNPILSDLI 137
+E+++K PIL D+I
Sbjct: 276 IEDLMKKPILKDVI 289
>gi|381210320|ref|ZP_09917391.1| stage III sporulation protein AA [Lentibacillus sp. Grbi]
Length = 325
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 75/139 (53%), Gaps = 9/139 (6%)
Query: 6 LHYGKSI--LFVGRPGVGKTTVMREIARVLSDEFQK----RVVIVDTSNEIGGD-GDIPH 58
L++ K + L +G P GKTT++R++AR++ + K +V +VD +EIGG IP
Sbjct: 132 LYHNKYVNTLIIGPPQTGKTTLIRDLARMIGSGWDKAGAHKVGVVDERSEIGGSHKGIPQ 191
Query: 59 SAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGT 118
+G R V + + + M+ + + PEV++VDEIG+E++ A GV ++ T
Sbjct: 192 HDLGV--RTDVMDACPKDEGMMMMIRSMSPEVLVVDEIGSESDVQALMEAVNAGVAVVCT 249
Query: 119 AHGEWLENIIKNPILSDLI 137
H LE + K P L L
Sbjct: 250 IHSSSLEALKKRPSLKPLF 268
>gi|297616604|ref|YP_003701763.1| stage III sporulation protein AA [Syntrophothermus lipocalidus DSM
12680]
gi|297144441|gb|ADI01198.1| stage III sporulation protein AA [Syntrophothermus lipocalidus DSM
12680]
Length = 326
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 70/127 (55%), Gaps = 4/127 (3%)
Query: 13 LFVGRPGVGKTTVMREIARVLSD-EFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 70
L V P GKTT++R++ R+ SD VV++D +EI IP +G R V
Sbjct: 162 LIVSPPRCGKTTLLRDLTRLYSDGPANLNVVVIDERSEIAACYQGIPQLNVGN--RTDVL 219
Query: 71 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 130
+ + M+ AV + P +++VDEIG A+A A + GV +I TAHG LE+I +
Sbjct: 220 DGCPKALGMMMAVRSLSPHLVVVDEIGRPADAEALQECVNAGVSVIATAHGTDLEDISRR 279
Query: 131 PILSDLI 137
PI++ L+
Sbjct: 280 PIMAGLL 286
>gi|289578279|ref|YP_003476906.1| stage III sporulation protein AA [Thermoanaerobacter italicus Ab9]
gi|289527992|gb|ADD02344.1| stage III sporulation protein AA [Thermoanaerobacter italicus Ab9]
Length = 332
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 9/134 (6%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGT 63
+IL + P GKTT++R+IAR +S+ K+V IVD +EI G + IP +G
Sbjct: 158 NILIISPPQCGKTTLLRDIARWISNGIDFLGFTGKKVGIVDERSEIAGCYNGIPQLDVGI 217
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 123
R V + + MI + + P+V++ DEIG + + A + GV +I T H
Sbjct: 218 --RTDVLDGCPKAHGMIMLIRSMSPQVVVTDEIGRKEDIEAIHEVLNTGVKIITTVHAND 275
Query: 124 LENIIKNPILSDLI 137
+E+++K PIL D+I
Sbjct: 276 IEDLMKKPILKDVI 289
>gi|220931461|ref|YP_002508369.1| Sporulation stage III protein AA [Halothermothrix orenii H 168]
gi|219992771|gb|ACL69374.1| Sporulation stage III protein AA [Halothermothrix orenii H 168]
Length = 316
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 79/146 (54%), Gaps = 14/146 (9%)
Query: 2 VYDL---LHYGKSILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGG 52
+YD ++Y + + V P GKTT++R+I R++S+ +K +V +VD +EIGG
Sbjct: 143 IYDFKNRVYY--NTMIVSPPLCGKTTLLRDIVRLISNGIKKYGIPGKKVGVVDERSEIGG 200
Query: 53 D-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAER 111
IP + IG+ R + + + K + V + PEVI VDEIG E + A +
Sbjct: 201 AYNGIPGNRIGS--RTDLLDNCPKAKGISLLVRSMSPEVIAVDEIGNEEDVIAIQEATNS 258
Query: 112 GVMLIGTAHGEWLENIIKNPILSDLI 137
GV LI TAHGE L + P ++ L+
Sbjct: 259 GVSLIATAHGENLTTLKMRPAMARLM 284
>gi|319651504|ref|ZP_08005632.1| stage III sporulation protein AA [Bacillus sp. 2_A_57_CT2]
gi|317396819|gb|EFV77529.1| stage III sporulation protein AA [Bacillus sp. 2_A_57_CT2]
Length = 307
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLS------DEFQKRVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R+IAR++S D +V IVD +EI G IP G
Sbjct: 140 MIIGPPQTGKTTLLRDIARIISSGDPNNDFPASKVGIVDERSEIAGCVNGIPQMTFGN-- 197
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + PEV++VDEIG +A A G+ LI T HG LE
Sbjct: 198 RIDVLDACPKAEGMMMMIRSMSPEVLVVDEIGRHEDAEAIMEAVNAGIKLIMTTHGNSLE 257
Query: 126 NIIKNPILSDLI 137
I K P L ++
Sbjct: 258 EIKKRPTLKAIL 269
>gi|149183869|ref|ZP_01862262.1| stage III sporulation protein AA [Bacillus sp. SG-1]
gi|148848430|gb|EDL62687.1| stage III sporulation protein AA [Bacillus sp. SG-1]
Length = 309
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 71/137 (51%), Gaps = 11/137 (8%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLSDEFQK--------RVVIVDTSNEIGGD-GDIPHSA 60
K + +G P GKTT++R+IAR++S F + +V IVD +EI G +P
Sbjct: 137 KHTMIIGAPQTGKTTMLRDIARIVSTGFPEESIPIPPYKVGIVDERSEIAGCVHGVPQLQ 196
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
G R+ V + + + M+ + + P+VIIVDEIG + A G+ LI T H
Sbjct: 197 FGP--RIDVLDACPKAEGMMMLIRSMSPDVIIVDEIGRREDGQAILEAVNAGITLIMTTH 254
Query: 121 GEWLENIIKNPILSDLI 137
G LE I K P L ++I
Sbjct: 255 GHSLEEISKRPYLKEII 271
>gi|392955288|ref|ZP_10320831.1| stage III sporulation protein AA [Bacillus macauensis ZFHKF-1]
gi|391878760|gb|EIT87337.1| stage III sporulation protein AA [Bacillus macauensis ZFHKF-1]
Length = 308
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 73/131 (55%), Gaps = 9/131 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLS--DE----FQKRVVIVDTSNEIGGD-GDIPHSAIGTAR 65
L +G P GKTT++R++AR++S DE ++V IVD +EI G IP +G+
Sbjct: 145 LIIGAPQTGKTTLLRDLARLISVGDEQTRISSRKVGIVDERSEIAGSVRGIPQFELGS-- 202
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + PE++IVDEIG + + A GV LI TAHG L+
Sbjct: 203 RVDVLDACPKAEGMMMLIRSMSPEILIVDEIGRKEDVEAMIEAMHAGVGLIATAHGYSLQ 262
Query: 126 NIIKNPILSDL 136
+K P L L
Sbjct: 263 EAMKRPALEAL 273
>gi|167037501|ref|YP_001665079.1| ATPase AAA [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|320115915|ref|YP_004186074.1| stage III sporulation protein AA [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|166856335|gb|ABY94743.1| AAA ATPase [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|319929006|gb|ADV79691.1| stage III sporulation protein AA [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 332
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 9/134 (6%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGT 63
+IL + P GKTT++R+I R +S+ K+V +VD +EI G + IP +G
Sbjct: 158 NILIISPPQCGKTTLLRDITRWISNGIDFLGFKGKKVGVVDERSEIAGCYNGIPQMDVGI 217
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 123
R V + + MI + + PEV++ DEIG + + A + GV +I T H
Sbjct: 218 --RTDVLDGCPKAYGMIMLIRSMSPEVVVTDEIGKKEDIEAIHEVLNTGVKIITTVHAND 275
Query: 124 LENIIKNPILSDLI 137
+E+++K P+L D+I
Sbjct: 276 IEDLMKKPVLKDVI 289
>gi|167040163|ref|YP_001663148.1| ATPase AAA [Thermoanaerobacter sp. X514]
gi|300914246|ref|ZP_07131562.1| stage III sporulation protein AA [Thermoanaerobacter sp. X561]
gi|307724518|ref|YP_003904269.1| stage III sporulation protein AA [Thermoanaerobacter sp. X513]
gi|166854403|gb|ABY92812.1| AAA ATPase [Thermoanaerobacter sp. X514]
gi|300889181|gb|EFK84327.1| stage III sporulation protein AA [Thermoanaerobacter sp. X561]
gi|307581579|gb|ADN54978.1| stage III sporulation protein AA [Thermoanaerobacter sp. X513]
Length = 332
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 9/134 (6%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGT 63
+IL + P GKTT++R+I R +S+ K+V +VD +EI G + IP +G
Sbjct: 158 NILIISPPQCGKTTLLRDITRWISNGIDFLGFKGKKVGVVDERSEIAGCYNGIPQMDVGL 217
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 123
R V + + MI + + PEV++ DEIG + + A + GV +I T H
Sbjct: 218 --RTDVLDGCPKAYGMIMLIRSMSPEVVVTDEIGKKEDIEAIHEVLNTGVKIITTVHAND 275
Query: 124 LENIIKNPILSDLI 137
+E+++K P+L D+I
Sbjct: 276 IEDLMKKPVLKDVI 289
>gi|256752877|ref|ZP_05493715.1| stage III sporulation protein AA [Thermoanaerobacter ethanolicus
CCSD1]
gi|256748254|gb|EEU61320.1| stage III sporulation protein AA [Thermoanaerobacter ethanolicus
CCSD1]
Length = 332
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 9/134 (6%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGT 63
+IL + P GKTT++R+I R +S+ K+V +VD +EI G + IP +G
Sbjct: 158 NILIISPPQCGKTTLLRDITRWISNGIDFLGFKGKKVGVVDERSEIAGCYNGIPQMDVGL 217
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 123
R V + + MI + + PEV++ DEIG + + A + GV +I T H
Sbjct: 218 --RTDVLDGCPKAYGMIMLIRSMSPEVVVTDEIGKKEDIEAIHEVLNTGVKIITTVHAND 275
Query: 124 LENIIKNPILSDLI 137
+E+++K P+L D+I
Sbjct: 276 IEDLMKKPVLKDVI 289
>gi|332981353|ref|YP_004462794.1| stage III sporulation protein AA [Mahella australiensis 50-1 BON]
gi|332699031|gb|AEE95972.1| stage III sporulation protein AA [Mahella australiensis 50-1 BON]
Length = 332
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 7/130 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGD-GDIPHSAIGTARRM 67
L V P GKTT++R+IAR LSD ++VVIVD +E+ G I + +G R
Sbjct: 167 LVVSPPQCGKTTLLRDIARQLSDGCSACIPRKVVIVDERSELAGSYMGIAQNDVGI--RT 224
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
V + + ++ A+ P+VI+ DEIG + + +A G++++ +AHG+ + +I
Sbjct: 225 DVLDACPKAAGIMMAIRAMSPDVIVTDEIGRQEDVYAIEEALNSGIIVVASAHGKDISDI 284
Query: 128 IKNPILSDLI 137
PIL L+
Sbjct: 285 SNRPILKQLM 294
>gi|387929684|ref|ZP_10132361.1| stage III sporulation protein AA [Bacillus methanolicus PB1]
gi|387586502|gb|EIJ78826.1| stage III sporulation protein AA [Bacillus methanolicus PB1]
Length = 307
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 71/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R+IAR++S + +V IVD +EI G IP G
Sbjct: 140 MIIGPPQTGKTTLLRDIARIISTGNEDLGFGASKVGIVDERSEIAGCVKGIPQLTFGN-- 197
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+V++VDEIG E +A A G+ LI T HG LE
Sbjct: 198 RIDVLDACPKAEGMMMMIRSMSPDVLVVDEIGREEDALAIMEAVNAGIKLIMTTHGSSLE 257
Query: 126 NIIKNPILSDLI 137
+ K P L +++
Sbjct: 258 EVRKRPSLKNIL 269
>gi|288553343|ref|YP_003425278.1| stage III sporulation protein AA [Bacillus pseudofirmus OF4]
gi|288544503|gb|ADC48386.1| stage III sporulation protein AA [Bacillus pseudofirmus OF4]
Length = 319
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 75/132 (56%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQKR------VVIVDTSNEIGGDG-DIPHSAIGTAR 65
LF+G P GKTT++R++AR++S+ +KR V I+D +EI +P +G
Sbjct: 147 LFIGPPQTGKTTILRDVARLISEGDEKRGIAPLKVGIIDERSEICASMRGVPQHQLGP-- 204
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+V+IVDEIG + A + GV +I T HG ++
Sbjct: 205 RIDVLDGCPKAEGMMMMIRSMSPDVLIVDEIGRVEDVLAVQEAVHAGVGVITTVHGHTID 264
Query: 126 NIIKNPILSDLI 137
+++K P L +L+
Sbjct: 265 DVLKRPALKELM 276
>gi|118444024|ref|YP_878042.1| stage III sporulation protein AA [Clostridium novyi NT]
gi|118134480|gb|ABK61524.1| stage III sporulation protein AA, SpoIIIAA [Clostridium novyi NT]
Length = 298
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 72/126 (57%), Gaps = 4/126 (3%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGD-IPHSAIGTARRMQVPE 71
+ + P GKTT++R+I R LS +K+V I+D +EI + +P +G R + +
Sbjct: 141 IIISPPKCGKTTLIRDITRNLSTA-KKKVCIIDERSEIASCFEGVPQMDVGI--RTDILD 197
Query: 72 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 131
++ + +I A+ + PEVI+ DEIGT ++ + GV LI T HG +E++ + P
Sbjct: 198 NCIKSQGIIMAIRSMAPEVIVCDEIGTHSDIQSIVMAMNSGVNLITTIHGFGIEDLYRRP 257
Query: 132 ILSDLI 137
+ ++++
Sbjct: 258 VFNEVV 263
>gi|317498108|ref|ZP_07956410.1| stage III sporulation protein AA [Lachnospiraceae bacterium
5_1_63FAA]
gi|316894585|gb|EFV16765.1| stage III sporulation protein AA [Lachnospiraceae bacterium
5_1_63FAA]
Length = 315
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 72/126 (57%), Gaps = 4/126 (3%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPE 71
L + PG GKTT++R++ R +SDE Q V +VD +EIG + + +G + V +
Sbjct: 161 LIISPPGCGKTTLLRDMIRKISDEGQT-VGVVDERSEIGACYQGVAQNDLGI--QTDVMD 217
Query: 72 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 131
+ + M + + P+VI VDEIG++ + A A RG ++ TAHG+ E++ KNP
Sbjct: 218 ACEKGQGMNMLIRSMAPDVIAVDEIGSKEDVEALFFCAYRGCSILATAHGKNKESLSKNP 277
Query: 132 ILSDLI 137
+ ++I
Sbjct: 278 YMREII 283
>gi|291559558|emb|CBL38358.1| stage III sporulation protein AA [butyrate-producing bacterium
SSC/2]
Length = 308
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 72/126 (57%), Gaps = 4/126 (3%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPE 71
L + PG GKTT++R++ R +SDE Q V +VD +EIG + + +G + V +
Sbjct: 154 LIISPPGCGKTTLLRDMIRKISDEGQT-VGVVDERSEIGACYQGVAQNDLGI--QTDVMD 210
Query: 72 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 131
+ + M + + P+VI VDEIG++ + A A RG ++ TAHG+ E++ KNP
Sbjct: 211 ACEKGQGMNMLIRSMAPDVIAVDEIGSKEDVEALFFCAYRGCSILATAHGKNKESLSKNP 270
Query: 132 ILSDLI 137
+ ++I
Sbjct: 271 YMREII 276
>gi|238917027|ref|YP_002930544.1| stage III sporulation protein AA [Eubacterium eligens ATCC 27750]
gi|238872387|gb|ACR72097.1| stage III sporulation protein AA [Eubacterium eligens ATCC 27750]
Length = 289
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 64/116 (55%), Gaps = 3/116 (2%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQ 68
K + + PG GKTT++R+I R LSD ++K VV++D EI +P + IG R
Sbjct: 142 KHTIIISPPGFGKTTLLRDIIRQLSDIYRKNVVLIDERCEIAACVNGVPCNDIGC--RTD 199
Query: 69 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 124
V + + + AV + P+V+ +DEIG E + A + + G +IGTAHG +
Sbjct: 200 VLDGCNKLTGVYMAVRSLSPQVVAMDEIGGEDDIKAVKYCIKSGCAVIGTAHGSGI 255
>gi|429762047|ref|ZP_19294454.1| stage III sporulation protein AA [Anaerostipes hadrus DSM 3319]
gi|429182593|gb|EKY23691.1| stage III sporulation protein AA [Anaerostipes hadrus DSM 3319]
Length = 345
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 72/126 (57%), Gaps = 4/126 (3%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPE 71
L + PG GKTT++R++ R +SDE Q V +VD +EIG + + +G + V +
Sbjct: 191 LIISPPGCGKTTLLRDMIRKISDEGQT-VGVVDERSEIGACYQGVAQNDLGI--QTDVMD 247
Query: 72 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 131
+ + M + + P+VI VDEIG++ + A A RG ++ TAHG+ E++ KNP
Sbjct: 248 ACEKGQGMNMLIRSMAPDVIAVDEIGSKEDVEALFFCAYRGCSILATAHGKNKESLSKNP 307
Query: 132 ILSDLI 137
+ ++I
Sbjct: 308 YMREII 313
>gi|167767112|ref|ZP_02439165.1| hypothetical protein CLOSS21_01630 [Clostridium sp. SS2/1]
gi|167711087|gb|EDS21666.1| stage III sporulation protein AA [Clostridium sp. SS2/1]
Length = 342
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 72/126 (57%), Gaps = 4/126 (3%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPE 71
L + PG GKTT++R++ R +SDE Q V +VD +EIG + + +G + V +
Sbjct: 188 LIISPPGCGKTTLLRDMIRKISDEGQT-VGVVDERSEIGACYQGVAQNDLGI--QTDVMD 244
Query: 72 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 131
+ + M + + P+VI VDEIG++ + A A RG ++ TAHG+ E++ KNP
Sbjct: 245 ACEKGQGMNMLIRSMAPDVIAVDEIGSKEDVEALFFCAYRGCSILATAHGKNKESLSKNP 304
Query: 132 ILSDLI 137
+ ++I
Sbjct: 305 YMREII 310
>gi|253578537|ref|ZP_04855809.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850855|gb|EES78813.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 312
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 69/133 (51%), Gaps = 7/133 (5%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDEFQKR----VVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ L + P GKTT++R+I R LS+ + + +VD +E+ G IP + +G
Sbjct: 149 NTLIISPPRCGKTTLLRDIIRQLSNGWANTQGLTIGVVDERSELAGCYQGIPQNDLGM-- 206
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + + + M V + P+V+ VDE+G E + A S+ G LI TAHG LE
Sbjct: 207 RTDVLDCCPKSEGMQMLVRSMSPDVVAVDELGCEEDFKAVDSVIHCGCKLIATAHGSCLE 266
Query: 126 NIIKNPILSDLIG 138
+++ P L+G
Sbjct: 267 DVLDQPFFYKLMG 279
>gi|138895978|ref|YP_001126431.1| stage III sporulation protein AA [Geobacillus thermodenitrificans
NG80-2]
gi|196248870|ref|ZP_03147570.1| stage III sporulation protein AA [Geobacillus sp. G11MC16]
gi|134267491|gb|ABO67686.1| Stage III sporulation protein AA [Geobacillus thermodenitrificans
NG80-2]
gi|196211746|gb|EDY06505.1| stage III sporulation protein AA [Geobacillus sp. G11MC16]
Length = 306
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK----RVVIVDTSNEIGGD-GDIPHSAIGTARRM 67
+ +G P GKTT++R++AR++S ++ +V IVD +EI G IP + G R+
Sbjct: 139 MIIGSPQTGKTTLLRDVARLISSGTERIPAQKVAIVDERSEIAGCVKGIPQFSFGP--RL 196
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
V + + + M+ + + P+VIIVDEIG E ++ A A GV + T HG ++++
Sbjct: 197 DVLDACPKAEGMMMMIRSMSPDVIIVDEIGREEDSEAVLEAANAGVSVWTTVHGRSIKDV 256
Query: 128 IKNPILSDLI 137
+ P L ++
Sbjct: 257 QQRPTLGSVM 266
>gi|326390193|ref|ZP_08211754.1| stage III sporulation protein AA [Thermoanaerobacter ethanolicus JW
200]
gi|325993841|gb|EGD52272.1| stage III sporulation protein AA [Thermoanaerobacter ethanolicus JW
200]
Length = 332
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 9/134 (6%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGT 63
+IL + P GKTT++R+I R +S+ K+V VD +EI G + IP +G
Sbjct: 158 NILIISPPQCGKTTLLRDITRWISNGIDFLGFKGKKVGAVDERSEIAGCYNGIPQMDVGI 217
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 123
R V + + MI + + PEV++ DEIG + + A + GV +I T H
Sbjct: 218 --RTDVLDGCPKAYGMIMLIRSMSPEVVVTDEIGKKEDIEAIHEVLNTGVKIITTVHAND 275
Query: 124 LENIIKNPILSDLI 137
+E+++K P+L D+I
Sbjct: 276 IEDLMKKPVLKDVI 289
>gi|345017586|ref|YP_004819939.1| stage III sporulation protein AA [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344032929|gb|AEM78655.1| stage III sporulation protein AA [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 332
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 9/134 (6%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGT 63
+IL + P GKTT++R+I R +S+ K+V VD +EI G + IP +G
Sbjct: 158 NILIISPPQCGKTTLLRDITRWISNGIDFLGFKGKKVGAVDERSEIAGCYNGIPQMDVGI 217
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 123
R V + + MI + + PEV++ DEIG + + A + GV +I T H
Sbjct: 218 --RTDVLDGCPKAYGMIMLIRSMSPEVVVTDEIGKKEDIEAIHEVLNTGVKIITTVHAND 275
Query: 124 LENIIKNPILSDLI 137
+E+++K P+L D+I
Sbjct: 276 IEDLMKKPVLKDVI 289
>gi|182417972|ref|ZP_02949280.1| stage III sporulation protein AA [Clostridium butyricum 5521]
gi|237668875|ref|ZP_04528859.1| stage III sporulation protein AA [Clostridium butyricum E4 str.
BoNT E BL5262]
gi|182378143|gb|EDT75678.1| stage III sporulation protein AA [Clostridium butyricum 5521]
gi|237657223|gb|EEP54779.1| stage III sporulation protein AA [Clostridium butyricum E4 str.
BoNT E BL5262]
Length = 308
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 73/132 (55%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDE------FQKRVVIVDTSNEIGG-DGDIPHSAIGTAR 65
+ + P GKTT++R+IAR +S+ + ++V ++D +EIG IP + +G
Sbjct: 144 IIISPPKCGKTTILRDIARNISNGMNSIGLYGRKVAVIDERSEIGACHFGIPQNDLGM-- 201
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R + + L+ + MI A+ + PE++I DEIGT+ + A GV +I + HG +E
Sbjct: 202 RTDILDNCLKKEGMIMAIRSLSPEILICDEIGTKGDVEALLMAFNSGVNIITSIHGFTIE 261
Query: 126 NIIKNPILSDLI 137
++ K + +L+
Sbjct: 262 DLYKRKVFHELL 273
>gi|392941068|ref|ZP_10306712.1| LOW QUALITY PROTEIN: stage III sporulation protein AA
[Thermoanaerobacter siderophilus SR4]
gi|392292818|gb|EIW01262.1| LOW QUALITY PROTEIN: stage III sporulation protein AA
[Thermoanaerobacter siderophilus SR4]
Length = 332
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 9/134 (6%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGT 63
+IL + P GKTT++R+I R +S+ K+V VD +EI G + IP +G
Sbjct: 158 NILIISPPQCGKTTLLRDITRWISNGIDFLGFKGKKVGAVDERSEIAGCYNGIPQMDVGI 217
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 123
R V + + MI + + PEV++ DEIG + + A + GV +I T H
Sbjct: 218 --RTDVLDGCPKAYGMIMLIRSMSPEVVVTDEIGKKEDIEAIHEVLNTGVKIITTVHAND 275
Query: 124 LENIIKNPILSDLI 137
+E+++K P+L D+I
Sbjct: 276 IEDLMKKPVLKDVI 289
>gi|255524184|ref|ZP_05391144.1| stage III sporulation protein AA [Clostridium carboxidivorans P7]
gi|296186639|ref|ZP_06855041.1| stage III sporulation protein AA [Clostridium carboxidivorans P7]
gi|255512169|gb|EET88449.1| stage III sporulation protein AA [Clostridium carboxidivorans P7]
gi|296048676|gb|EFG88108.1| stage III sporulation protein AA [Clostridium carboxidivorans P7]
Length = 308
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 72/132 (54%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGTAR 65
+ + P GKTT++R+I R +SD + K+V ++D +EIG + IP +G
Sbjct: 144 IVISPPKCGKTTLIRDIVRNISDGMKQKAFTGKKVCVIDERSEIGACYNGIPQLKLGL-- 201
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R + + L+ + ++ A+ + P+V++ DEIGT + + GV LI T HG +E
Sbjct: 202 RTDILDSCLKSQGIMMAIRSMSPDVVVCDEIGTYKDMDSILFALNSGVNLITTIHGYGIE 261
Query: 126 NIIKNPILSDLI 137
++ K P+ +++
Sbjct: 262 DLYKRPVFKEIV 273
>gi|187935302|ref|YP_001886604.1| stage III sporulation protein AA [Clostridium botulinum B str.
Eklund 17B]
gi|187723455|gb|ACD24676.1| stage III sporulation protein AA [Clostridium botulinum B str.
Eklund 17B]
Length = 306
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 73/132 (55%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ + P GKTT++R+I+R +S+ + K+V ++D +EIG +P S +G
Sbjct: 142 IIISPPKCGKTTILRDISRNISNGMKSLGLNGKKVSVIDERSEIGACYFGVPQSDLGI-- 199
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R + + L+ + MI ++ + PEV+I DEIGT+ + A GV +I + HG ++
Sbjct: 200 RTDILDNCLKKEGMIMSIRSLSPEVLICDEIGTKGDIEALIMAFNSGVNIITSIHGFTID 259
Query: 126 NIIKNPILSDLI 137
+I K + +LI
Sbjct: 260 DIYKRKVFKELI 271
>gi|153938479|ref|YP_001391217.1| stage III sporulation protein AA [Clostridium botulinum F str.
Langeland]
gi|384462236|ref|YP_005674831.1| stage III sporulation protein AA [Clostridium botulinum F str.
230613]
gi|152934375|gb|ABS39873.1| stage III sporulation protein AA [Clostridium botulinum F str.
Langeland]
gi|295319253|gb|ADF99630.1| stage III sporulation protein AA [Clostridium botulinum F str.
230613]
Length = 307
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGTAR 65
+ + P GKTT++R+I++ +SD K+V ++D +EI G + +P +G
Sbjct: 141 IIISPPKCGKTTIIRDISKKISDGVDALNLKGKKVSVIDERSEIAGSYNGVPQLDVGL-- 198
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + + + ++ A+ + PEVII DEIGT + + GV LI T HG +E
Sbjct: 199 RTDVLDNCPKSEGIVMAIRSMAPEVIICDEIGTYNDVESILIALNSGVSLITTIHGFGVE 258
Query: 126 NIIKNPILSDLI 137
NI P+ +++
Sbjct: 259 NIYNRPVFKEIV 270
>gi|188590784|ref|YP_001921561.1| stage III sporulation protein AA [Clostridium botulinum E3 str.
Alaska E43]
gi|188501065|gb|ACD54201.1| stage III sporulation protein AA [Clostridium botulinum E3 str.
Alaska E43]
Length = 306
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 73/132 (55%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ + P GKTT++R+I+R +S+ + K+V ++D +EIG +P S +G
Sbjct: 142 IIISPPKCGKTTILRDISRNISNGMKSLGLNGKKVSVIDERSEIGACYFGVPQSDLGI-- 199
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R + + L+ + MI ++ + PEV+I DEIGT+ + A GV +I + HG ++
Sbjct: 200 RTDILDNCLKKEGMIMSIRSLSPEVLICDEIGTKGDIEALIMAFNSGVNIITSIHGFTID 259
Query: 126 NIIKNPILSDLI 137
+I K + +LI
Sbjct: 260 DIYKRKVFKELI 271
>gi|251778035|ref|ZP_04820955.1| stage III sporulation protein AA [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|243082350|gb|EES48240.1| stage III sporulation protein AA [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 306
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 73/132 (55%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDG-DIPHSAIGTAR 65
+ + P GKTT++R+I+R +S+ + K+V ++D +EIG +P S +G
Sbjct: 142 IIISPPKCGKTTILRDISRNISNGMKSLGLNGKKVSVIDERSEIGACYLGVPQSDLGI-- 199
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R + + L+ + MI ++ + PEV+I DEIGT+ + A GV +I + HG ++
Sbjct: 200 RTDILDNCLKKEGMIMSIRSLSPEVLICDEIGTKGDIEALIMAFNSGVNIITSIHGFTID 259
Query: 126 NIIKNPILSDLI 137
+I K + +LI
Sbjct: 260 DIYKRKVFKELI 271
>gi|317132167|ref|YP_004091481.1| stage III sporulation protein AA [Ethanoligenens harbinense YUAN-3]
gi|315470146|gb|ADU26750.1| stage III sporulation protein AA [Ethanoligenens harbinense YUAN-3]
Length = 336
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 66/125 (52%), Gaps = 6/125 (4%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLSDEFQKR--VVIVDTSNEIGGD-GDIPHSAIGTARR 66
+ + G PG GKTTV+R++AR LS+ R V +VD EI +P + IG +
Sbjct: 159 RGTILAGPPGCGKTTVLRDLARQLSNGVSGRCRVSVVDERGEIAATFKGVPQNDIG---Q 215
Query: 67 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 126
V + + + +++AV P+V+I DEIG E +A A + GV +I +AH +E
Sbjct: 216 CDVLDGYPKGEGILQAVRCLSPDVVICDEIGGETDARAVAASLNAGVAVIASAHAAKMEE 275
Query: 127 IIKNP 131
+ P
Sbjct: 276 LFARP 280
>gi|168186187|ref|ZP_02620822.1| stage III sporulation protein AA [Clostridium botulinum C str.
Eklund]
gi|169295742|gb|EDS77875.1| stage III sporulation protein AA [Clostridium botulinum C str.
Eklund]
Length = 298
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 72/126 (57%), Gaps = 4/126 (3%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGD-IPHSAIGTARRMQVPE 71
+ + P GKTT++R+I+R LS +K++ I+D +EI + +P +G R + +
Sbjct: 141 IIISPPKCGKTTLIRDISRNLSIA-KKKICIIDERSEIASCFEGVPQMDVGI--RTDILD 197
Query: 72 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 131
++ + +I A+ + PEVI+ DEIGT + + GV LI T HG +E++ + P
Sbjct: 198 NCVKSQGIIMAIRSMAPEVIVCDEIGTHRDVESIIMAMNSGVNLITTIHGFGIEDLYRRP 257
Query: 132 ILSDLI 137
+ +++I
Sbjct: 258 VFNEVI 263
>gi|374708800|ref|ZP_09713234.1| stage III sporulation protein AA [Sporolactobacillus inulinus CASD]
Length = 317
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 71/134 (52%), Gaps = 9/134 (6%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDEF------QKRVVIVDTSNEIGGDGD-IPHSAIGT 63
S L +G P GKTT++R++AR++S+ ++ IVD +E+ G D +P + +G
Sbjct: 144 STLLIGAPQTGKTTMLRDLARLVSEGIPDRYLPSRKTAIVDERSELAGCVDGVPQNRLGV 203
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 123
R V + + + M+ + + PEV+IVDEIG + A GV ++ +AHG
Sbjct: 204 --RADVMDACPKAEGMMMMIRSMSPEVLIVDEIGGAEDTKALLEALNAGVAVMASAHGFT 261
Query: 124 LENIIKNPILSDLI 137
+ ++ P + LI
Sbjct: 262 FDQLLHRPSIRPLI 275
>gi|410453700|ref|ZP_11307645.1| stage III sporulation protein AA [Bacillus bataviensis LMG 21833]
gi|409932914|gb|EKN69868.1| stage III sporulation protein AA [Bacillus bataviensis LMG 21833]
Length = 308
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 71/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R+IAR++S + +V +VD +EI G +P G
Sbjct: 140 MIIGPPQTGKTTLLRDIARIISTGNRAGGIQAYKVGVVDERSEIAGCVHGVPQLTFG--H 197
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+V+IVDEIG + +A A G+ LI T HG +E
Sbjct: 198 RLDVLDACPKAEGMMMLIRSMSPDVLIVDEIGRKEDAEAILEAVHAGIKLIMTTHGTSIE 257
Query: 126 NIIKNPILSDLI 137
+ K P L DLI
Sbjct: 258 ELRKRPSLRDLI 269
>gi|291520786|emb|CBK79079.1| stage III sporulation protein AA [Coprococcus catus GD/7]
Length = 351
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 7/131 (5%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSD----EFQKRVVIVDTSNEIGGD-GDIPHSAIGTAR 65
S L + PG GKTT++R++ R S+ E +RV +VD +EI IP + +G
Sbjct: 153 STLILSPPGCGKTTMLRDVIRQFSNGCGQEAGRRVGVVDERSEIAACYRGIPQNDMGI-- 210
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + +H M + + PE++ VDEIG+ + A ++ G L+ TAHG +E
Sbjct: 211 RTDVLDGCAKHMGMQMMLRSMTPEILAVDEIGSRTDKEAIDAVMNCGCCLLATAHGASME 270
Query: 126 NIIKNPILSDL 136
+ P L +
Sbjct: 271 KMQMRPALRQM 281
>gi|168215461|ref|ZP_02641086.1| stage III sporulation protein AA [Clostridium perfringens NCTC
8239]
gi|182382302|gb|EDT79781.1| stage III sporulation protein AA [Clostridium perfringens NCTC
8239]
Length = 294
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGTAR 65
L + P GKTT++R+I R +S+ KR V++D +EI + IP +G
Sbjct: 139 LIISPPKCGKTTLLRDITRNISNGISQIGFKGKRTVVIDERSEIAACYNGIPQMNVGM-- 196
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + ++ + M+ AV PEVII DEIGT + GV +I T HG +E
Sbjct: 197 RTDVYDNCIKSEGMMMAVRGLSPEVIICDEIGTYKDMEGLMMAYNSGVSIIATLHGRNVE 256
Query: 126 NIIKNPILSDLI 137
+ + P+ +++
Sbjct: 257 ELYRRPVFREIV 268
>gi|422874752|ref|ZP_16921237.1| stage III sporulation protein AA [Clostridium perfringens F262]
gi|380304393|gb|EIA16682.1| stage III sporulation protein AA [Clostridium perfringens F262]
Length = 294
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGTAR 65
L + P GKTT++R+I R +S+ KR V++D +EI + IP +G
Sbjct: 139 LIISPPKCGKTTLLRDITRNISNGISQIGFKGKRTVVIDERSEIAACYNGIPQMNVGM-- 196
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + ++ + M+ AV PEVII DEIGT + GV +I T HG +E
Sbjct: 197 RTDVYDNCIKSEGMMMAVRGLSPEVIICDEIGTYKDMEGLMMAYNSGVSIIATLHGRNVE 256
Query: 126 NIIKNPILSDLI 137
+ + P+ +++
Sbjct: 257 ELYRRPVFREIV 268
>gi|110800786|ref|YP_696516.1| stage III sporulation protein AA [Clostridium perfringens ATCC
13124]
gi|168206113|ref|ZP_02632118.1| stage III sporulation protein AA [Clostridium perfringens E str.
JGS1987]
gi|168210804|ref|ZP_02636429.1| stage III sporulation protein AA [Clostridium perfringens B str.
ATCC 3626]
gi|169343721|ref|ZP_02864720.1| stage III sporulation protein AA [Clostridium perfringens C str.
JGS1495]
gi|182625637|ref|ZP_02953406.1| stage III sporulation protein AA [Clostridium perfringens D str.
JGS1721]
gi|422346502|ref|ZP_16427416.1| stage III sporulation protein AA [Clostridium perfringens
WAL-14572]
gi|110675433|gb|ABG84420.1| stage III sporulation protein AA [Clostridium perfringens ATCC
13124]
gi|169298281|gb|EDS80371.1| stage III sporulation protein AA [Clostridium perfringens C str.
JGS1495]
gi|170662470|gb|EDT15153.1| stage III sporulation protein AA [Clostridium perfringens E str.
JGS1987]
gi|170711143|gb|EDT23325.1| stage III sporulation protein AA [Clostridium perfringens B str.
ATCC 3626]
gi|177909039|gb|EDT71514.1| stage III sporulation protein AA [Clostridium perfringens D str.
JGS1721]
gi|373226047|gb|EHP48374.1| stage III sporulation protein AA [Clostridium perfringens
WAL-14572]
Length = 294
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTAR 65
L + P GKTT++R+I R +S+ KR V++D +EI IP +G
Sbjct: 139 LIISPPKCGKTTLLRDITRNISNGISQIGFKGKRTVVIDERSEIAACYNGIPQMNVGM-- 196
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + ++ + M+ AV PEVII DEIGT + GV +I T HG +E
Sbjct: 197 RTDVYDNCIKSEGMMMAVRGLSPEVIICDEIGTYKDMEGLMMAYNSGVSIIATLHGRNVE 256
Query: 126 NIIKNPILSDLI 137
+ + P+ +++
Sbjct: 257 ELYRRPVFREIV 268
>gi|421874483|ref|ZP_16306087.1| stage III sporulation protein AA [Brevibacillus laterosporus GI-9]
gi|372456527|emb|CCF15636.1| stage III sporulation protein AA [Brevibacillus laterosporus GI-9]
Length = 320
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 76/133 (57%), Gaps = 7/133 (5%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLS--DEFQ--KRVVIVDTSNEIGGDGD-IPHSAIGTA 64
+S L + P GKTT++R++AR +S +E+ K+V IVD +EI G + IP +G
Sbjct: 150 QSTLVISPPQCGKTTLLRDLARSISYGNEWSSSKKVGIVDERSEIAGCYNGIPQRDVGP- 208
Query: 65 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 124
R V + + M+ + + P++++VDEIG + ++ A GV ++ +AHG L
Sbjct: 209 -RTDVLDACPKAIGMMMMIRSMSPDLVVVDEIGRQEDSEAIWEALHAGVGVLCSAHGISL 267
Query: 125 ENIIKNPILSDLI 137
E+I K P +S LI
Sbjct: 268 EDIAKRPTISRLI 280
>gi|110801582|ref|YP_699116.1| stage III sporulation protein AA [Clostridium perfringens SM101]
gi|110682083|gb|ABG85453.1| stage III sporulation protein AA [Clostridium perfringens SM101]
Length = 294
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGTAR 65
L + P GKTT++R+I R +S+ KR V++D +EI + IP +G
Sbjct: 139 LIISPPKCGKTTLLRDITRNISNGISQIGFKGKRTVVIDERSEIAACYNGIPQMNVGM-- 196
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + ++ + M+ AV PEVII DEIGT + GV +I T HG +E
Sbjct: 197 RTDVYDNCIKSEGMMMAVRGLSPEVIICDEIGTYKDMEGLMMAYNSGVSIIATLHGRNVE 256
Query: 126 NIIKNPILSDLI 137
+ + P+ +++
Sbjct: 257 ELYRRPVFREIV 268
>gi|386714784|ref|YP_006181107.1| stage III sporulation protein AA [Halobacillus halophilus DSM 2266]
gi|384074340|emb|CCG45833.1| stage III sporulation protein AA [Halobacillus halophilus DSM 2266]
Length = 325
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 70/132 (53%), Gaps = 7/132 (5%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGD-GDIPHSAIGTAR 65
S L +G P GKTT++RE+A+ + Q +V IVD +EI +P +G
Sbjct: 138 STLIIGPPHSGKTTLLRELAQRIGSGHQDHRASKVAIVDERSEIAASLRGVPQLDVG--E 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + + + M+ + + PEV+IVDEIG A+A+A R GV +I + HG +
Sbjct: 196 RTDVMDACPKAEGMMMMIRSMSPEVLIVDEIGGVADANAIREATFTGVEVICSIHGTSIT 255
Query: 126 NIIKNPILSDLI 137
N+ K P +LI
Sbjct: 256 NVQKRPSARELI 267
>gi|339010279|ref|ZP_08642849.1| stage III sporulation protein AA [Brevibacillus laterosporus LMG
15441]
gi|338772434|gb|EGP31967.1| stage III sporulation protein AA [Brevibacillus laterosporus LMG
15441]
Length = 320
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 76/133 (57%), Gaps = 7/133 (5%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLS--DEFQ--KRVVIVDTSNEIGGDGD-IPHSAIGTA 64
+S L + P GKTT++R++AR +S +E+ K+V IVD +EI G + IP +G
Sbjct: 150 QSTLVISPPQCGKTTLLRDLARSISYGNEWSSSKKVGIVDERSEIAGCYNGIPQRDVGP- 208
Query: 65 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 124
R V + + M+ + + P++++VDEIG + ++ A GV ++ +AHG L
Sbjct: 209 -RTDVLDACPKAIGMMMMIRSMSPDLVVVDEIGRQEDSEAIWEALHAGVGVLCSAHGISL 267
Query: 125 ENIIKNPILSDLI 137
E+I K P +S LI
Sbjct: 268 EDIAKRPTISRLI 280
>gi|18310815|ref|NP_562749.1| stage III sporulation protein AA [Clostridium perfringens str. 13]
gi|18145497|dbj|BAB81539.1| stage III sporulation protein AA [Clostridium perfringens str. 13]
Length = 294
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTAR 65
L + P GKTT++R+I R +S+ KR V++D +EI IP +G
Sbjct: 139 LIISPPKCGKTTLLRDITRNISNGISQIGLKGKRTVVIDERSEIAACYNGIPQMNVGM-- 196
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + ++ + M+ AV PEVII DEIGT + GV +I T HG +E
Sbjct: 197 RTDVYDNCIKSEGMMMAVRGLSPEVIICDEIGTYKDMEGLMMAYNSGVSIIATLHGRNVE 256
Query: 126 NIIKNPILSDLI 137
+ + P+ +++
Sbjct: 257 ELYRRPVFREIV 268
>gi|373856780|ref|ZP_09599524.1| stage III sporulation protein AA [Bacillus sp. 1NLA3E]
gi|372453759|gb|EHP27226.1| stage III sporulation protein AA [Bacillus sp. 1NLA3E]
Length = 307
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R+IAR++S + +V IVD +EI G IP + G
Sbjct: 140 MIIGSPQTGKTTLLRDIARIISSGYLPMQLPPFKVGIVDERSEIAGSVNGIPQLSFGP-- 197
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+V++VDEIG + +A A G+ LI T HG L
Sbjct: 198 RIDVLDACPKAEGMMMMIRSMSPDVLVVDEIGRKEDAEAIMEAVNAGIKLIMTTHGNSLA 257
Query: 126 NIIKNPILSDLI 137
+ + P L ++
Sbjct: 258 EVQRRPSLQYIL 269
>gi|154483666|ref|ZP_02026114.1| hypothetical protein EUBVEN_01370 [Eubacterium ventriosum ATCC
27560]
gi|149735576|gb|EDM51462.1| putative stage III sporulation protein AA [Eubacterium ventriosum
ATCC 27560]
Length = 283
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 67/125 (53%), Gaps = 3/125 (2%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDG-DIPHS 59
+V ++ +++L + PG+GKTT++R I R S+ V +VD NEIGG +P
Sbjct: 131 LVNKIVEEKENLLIISPPGLGKTTLLRNIIRGYSNLKGINVTVVDERNEIGGSYRGVPMI 190
Query: 60 AIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 119
+G R V ++ ++ A+ + P+VI VDEIG+ A+ A GV ++ T
Sbjct: 191 NLGL--RTDVISDCTKYSGIVMAIRSMAPKVIAVDEIGSGADFKAIEYAVNSGVSVVATI 248
Query: 120 HGEWL 124
HG+ L
Sbjct: 249 HGKDL 253
>gi|228910029|ref|ZP_04073849.1| Stage III sporulation protein AA [Bacillus thuringiensis IBL 200]
gi|228849546|gb|EEM94380.1| Stage III sporulation protein AA [Bacillus thuringiensis IBL 200]
Length = 308
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP GT
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIAGCVKGIPQYDFGT-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+++IVDEIG + ++ A GV L +AHG E
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYE 255
Query: 126 NIIKNPILSDLI 137
+++K P L ++
Sbjct: 256 DVVKRPSLKAVL 267
>gi|404371401|ref|ZP_10976707.1| stage III sporulation protein AA [Clostridium sp. 7_2_43FAA]
gi|226912470|gb|EEH97671.1| stage III sporulation protein AA [Clostridium sp. 7_2_43FAA]
Length = 300
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGTAR 65
L V P GKTT++R+IA+ +S K+V I+D +EI + +P +G
Sbjct: 135 LIVSPPKCGKTTILRDIAKNISTGMPIVNLKGKKVSIIDERSEIAACFNGVPQLDVGI-- 192
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R + + L+ MI A+ + P+++I DEIGT+ + A GV +I T HG +E
Sbjct: 193 RSDILDNCLKKDGMIMAIRSLSPDILICDEIGTDGDIEALHMAFNSGVNIIVTIHGYSIE 252
Query: 126 NIIKNPILSDLI 137
++ K + DL+
Sbjct: 253 DVYKRKVFKDLL 264
>gi|170757502|ref|YP_001781446.1| stage III sporulation protein AA [Clostridium botulinum B1 str.
Okra]
gi|429246197|ref|ZP_19209539.1| stage III sporulation protein AA [Clostridium botulinum
CFSAN001628]
gi|169122714|gb|ACA46550.1| stage III sporulation protein AA [Clostridium botulinum B1 str.
Okra]
gi|428756801|gb|EKX79331.1| stage III sporulation protein AA [Clostridium botulinum
CFSAN001628]
Length = 307
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGTAR 65
+ + P GKTT++R+I++ +SD K+V ++D +EI G + +P +G
Sbjct: 141 IIISPPKCGKTTIIRDISKKISDGVDALNLKGKKVSVIDERSEIAGSYNGVPQLDVGL-- 198
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + + + ++ A+ + PEVII DEIGT + + GV LI T HG +E
Sbjct: 199 RTDVLDNCPKSEGIVMAIRSMAPEVIICDEIGTYNDVESILIALNSGVSLITTIHGFGVE 258
Query: 126 NIIKNPILSDLI 137
+I P+ +++
Sbjct: 259 DIYNRPVFKEIV 270
>gi|170760679|ref|YP_001787223.1| stage III sporulation protein AA [Clostridium botulinum A3 str.
Loch Maree]
gi|169407668|gb|ACA56079.1| stage III sporulation protein AA [Clostridium botulinum A3 str.
Loch Maree]
Length = 307
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGTAR 65
+ + P GKTT++R+I++ +SD K+V ++D +EI G + +P +G
Sbjct: 141 IIISPPKCGKTTIIRDISKKISDGVDALSLKGKKVSVIDERSEIAGSYNGVPQLDVGL-- 198
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + + + ++ A+ + PEVII DEIGT + + GV LI T HG +E
Sbjct: 199 RTDVLDNCPKSEGIVMAIRSMAPEVIICDEIGTYNDVESILIALNSGVSLITTIHGFGVE 258
Query: 126 NIIKNPILSDLI 137
+I P+ +++
Sbjct: 259 DIYNRPVFKEIV 270
>gi|148379856|ref|YP_001254397.1| stage III sporulation protein AA [Clostridium botulinum A str. ATCC
3502]
gi|153932422|ref|YP_001384153.1| stage III sporulation protein AA [Clostridium botulinum A str. ATCC
19397]
gi|153935244|ref|YP_001387694.1| stage III sporulation protein AA [Clostridium botulinum A str.
Hall]
gi|168180483|ref|ZP_02615147.1| stage III sporulation protein AA [Clostridium botulinum NCTC 2916]
gi|226949193|ref|YP_002804284.1| stage III sporulation protein AA [Clostridium botulinum A2 str.
Kyoto]
gi|148289340|emb|CAL83436.1| stage III sporulation protein AA [Clostridium botulinum A str. ATCC
3502]
gi|152928466|gb|ABS33966.1| stage III sporulation protein AA [Clostridium botulinum A str. ATCC
19397]
gi|152931158|gb|ABS36657.1| stage III sporulation protein AA [Clostridium botulinum A str.
Hall]
gi|182668758|gb|EDT80736.1| stage III sporulation protein AA [Clostridium botulinum NCTC 2916]
gi|226844597|gb|ACO87263.1| stage III sporulation protein AA [Clostridium botulinum A2 str.
Kyoto]
Length = 307
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGTAR 65
+ + P GKTT++R+I++ +SD K+V ++D +EI G + +P +G
Sbjct: 141 IIISPPKCGKTTIIRDISKKISDGVDALNLKGKKVSVIDERSEIAGSYNGVPQLDVGL-- 198
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + + + ++ A+ + PEVII DEIGT + + GV LI T HG +E
Sbjct: 199 RTDVLDNCPKSEGIVMAIRSMAPEVIICDEIGTYNDVESILIALNSGVSLITTIHGFGVE 258
Query: 126 NIIKNPILSDLI 137
+I P+ +++
Sbjct: 259 DIYNRPVFKEIV 270
>gi|168214407|ref|ZP_02640032.1| stage III sporulation protein AA [Clostridium perfringens CPE str.
F4969]
gi|170714158|gb|EDT26340.1| stage III sporulation protein AA [Clostridium perfringens CPE str.
F4969]
Length = 294
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGTAR 65
L + P GKTT++R+I R +S+ KR V++D +EI + IP +G
Sbjct: 139 LIISPPKCGKTTLLRDITRNISNGISQIGFKGKRTVVIDERSEIAACYNGIPQMNVGM-- 196
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + ++ + M+ AV PEVII DEIGT + GV +I T HG +E
Sbjct: 197 RTDVYDNCIKSEGMMMAVRGLSPEVIICDEIGTYKDMEGLMMAYNSGVSIIATLHGRNVE 256
Query: 126 NIIKNPILSDLI 137
+ + P+ +++
Sbjct: 257 ELYRRPVFREIM 268
>gi|229163141|ref|ZP_04291096.1| Stage III sporulation protein AA [Bacillus cereus R309803]
gi|228620204|gb|EEK77075.1| Stage III sporulation protein AA [Bacillus cereus R309803]
Length = 308
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP GT
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIAGCVKGIPQYEFGT-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+++IVDEIG + ++ A GV L +AHG E
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYE 255
Query: 126 NIIKNPILSDLI 137
+++K P L ++
Sbjct: 256 DVVKRPSLQAVL 267
>gi|423395504|ref|ZP_17372705.1| stage III sporulation protein AA [Bacillus cereus BAG2X1-1]
gi|423406380|ref|ZP_17383529.1| stage III sporulation protein AA [Bacillus cereus BAG2X1-3]
gi|401654915|gb|EJS72454.1| stage III sporulation protein AA [Bacillus cereus BAG2X1-1]
gi|401660374|gb|EJS77856.1| stage III sporulation protein AA [Bacillus cereus BAG2X1-3]
Length = 308
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP GT
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVSASQIPSCKVGIVDERSEIAGCVKGIPQYDFGT-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+++IVDEIG + ++ A GV L +AHG E
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYE 255
Query: 126 NIIKNPILSDLI 137
+++K P L ++
Sbjct: 256 DVVKRPSLKAVL 267
>gi|166030404|ref|ZP_02233233.1| hypothetical protein DORFOR_00065 [Dorea formicigenerans ATCC
27755]
gi|166029762|gb|EDR48519.1| stage III sporulation protein AA [Dorea formicigenerans ATCC 27755]
Length = 316
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 68/130 (52%), Gaps = 7/130 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLS--DEFQK--RVVIVDTSNEIGGDG-DIPHSAIGTARRM 67
L V PG GKTT++R++ R +S +EF K V +VD +EI G + + +G R
Sbjct: 147 LLVSPPGCGKTTLLRDLIRQISEGNEFIKGMSVGVVDERSEIAGCYRGVAQNHLGI--RT 204
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
V + + + MI + + PEVI VDEIG + HA G +I TAH + +E +
Sbjct: 205 DVLDGCPKAEGMIMLIRSMRPEVIAVDEIGGSEDVHAIEYAMHCGCRMIATAHADSMEEL 264
Query: 128 IKNPILSDLI 137
K P+ LI
Sbjct: 265 QKKPVFDRLI 274
>gi|194016755|ref|ZP_03055368.1| stage III sporulation protein AA [Bacillus pumilus ATCC 7061]
gi|194011361|gb|EDW20930.1| stage III sporulation protein AA [Bacillus pumilus ATCC 7061]
Length = 307
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 68/131 (51%), Gaps = 7/131 (5%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ L +G P GKTT++R+IAR+ S + K+ I+D +EI G +P G
Sbjct: 138 NTLIIGPPQTGKTTLLRDIARLASTGTKAIPPKKTGIIDERSEIAGCIRGVPQHQFG--H 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + ++ + + PEV+IVDEIG + A GV +I + HG LE
Sbjct: 196 RVDVLDACPKAEGLMMMIRSMSPEVMIVDEIGKSEDVQALLEAIHAGVTIIVSVHGYSLE 255
Query: 126 NIIKNPILSDL 136
N+ K P L L
Sbjct: 256 NVYKRPSLKPL 266
>gi|415885462|ref|ZP_11547390.1| stage III sporulation protein AA [Bacillus methanolicus MGA3]
gi|387591131|gb|EIJ83450.1| stage III sporulation protein AA [Bacillus methanolicus MGA3]
Length = 307
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLS---DEF---QKRVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R+IAR++S D +V IVD +EI G IP G
Sbjct: 140 MIIGPPQTGKTTLLRDIARIISTGNDALGLSASKVGIVDERSEIAGCVKGIPQLTFGN-- 197
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+V++VDEIG E +A A G+ LI T HG L
Sbjct: 198 RIDVLDACPKAEGMMMMIRSMSPDVLVVDEIGREEDALAIMEAVNAGIKLIMTTHGSSLL 257
Query: 126 NIIKNPILSDLI 137
I K P L ++
Sbjct: 258 EIRKRPSLKKIL 269
>gi|423634977|ref|ZP_17610630.1| stage III sporulation protein AA [Bacillus cereus VD156]
gi|401278963|gb|EJR84893.1| stage III sporulation protein AA [Bacillus cereus VD156]
Length = 308
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP GT
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVSASEIPSSKVGIVDERSEIAGCVKGIPQYDFGT-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+++IVDEIG + ++ A GV L +AHG E
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYE 255
Query: 126 NIIKNPILSDLI 137
++++ P L ++
Sbjct: 256 DVVRRPSLKAVL 267
>gi|423470413|ref|ZP_17447157.1| stage III sporulation protein AA [Bacillus cereus BAG6O-2]
gi|423558227|ref|ZP_17534529.1| stage III sporulation protein AA [Bacillus cereus MC67]
gi|401191495|gb|EJQ98517.1| stage III sporulation protein AA [Bacillus cereus MC67]
gi|402436542|gb|EJV68572.1| stage III sporulation protein AA [Bacillus cereus BAG6O-2]
Length = 308
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP GT
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGCVKGIPQYDFGT-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+V+IVDEIG + ++ A GV L +AHG +
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYD 255
Query: 126 NIIKNPILSDLI 137
+++K P L ++
Sbjct: 256 DVVKRPSLQAVL 267
>gi|30022276|ref|NP_833907.1| stage III sporulation protein AA [Bacillus cereus ATCC 14579]
gi|29897833|gb|AAP11108.1| Stage III sporulation protein AA [Bacillus cereus ATCC 14579]
Length = 316
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP GT
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIAGCVKGIPQYDFGT-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+++IVDEIG + ++ A GV L +AHG E
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYE 255
Query: 126 NIIKNPILSDLI 137
++++ P L ++
Sbjct: 256 DVVRRPSLKAVL 267
>gi|153810487|ref|ZP_01963155.1| hypothetical protein RUMOBE_00868 [Ruminococcus obeum ATCC 29174]
gi|149833666|gb|EDM88747.1| stage III sporulation protein AA [Ruminococcus obeum ATCC 29174]
Length = 251
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 67/129 (51%), Gaps = 7/129 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLS---DEFQKRVV-IVDTSNEIGGD-GDIPHSAIGTARRM 67
L + P GKTT++R++ R +S D Q + V +VD +E+ G IP + +G R
Sbjct: 93 LIIAPPRCGKTTLLRDMIRQISNGTDRIQGKTVGVVDERSELAGCYQGIPQNDLGM--RT 150
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
V + + K M + + P+V+ VDE+G + + A S+ G L TAHG LE+I
Sbjct: 151 DVLDACPKAKGMQMLLRSMSPDVVAVDELGKKEDFKAVESVVHCGCKLFATAHGNSLEDI 210
Query: 128 IKNPILSDL 136
++ P L
Sbjct: 211 LRQPFFQKL 219
>gi|326790836|ref|YP_004308657.1| stage III sporulation protein AA [Clostridium lentocellum DSM 5427]
gi|326541600|gb|ADZ83459.1| stage III sporulation protein AA [Clostridium lentocellum DSM 5427]
Length = 314
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 70/130 (53%), Gaps = 7/130 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK----RVVIVDTSNEIGGD-GDIPHSAIGTARRM 67
L + PG GKTT++R++ R LS+ F V +VD +EI +P + +G+ +
Sbjct: 153 LIISPPGCGKTTLLRDMIRYLSEGFCGYGPYTVGVVDERSEIAACYQGVPQNRMGSRTDV 212
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
P ++ M+ + + P+VI VDEIG + A I GV L+ T HG+ +E+
Sbjct: 213 LDGCPKVEGMRML--LRSMAPQVIAVDEIGKADDCTALEEILNVGVSLLCTVHGKNIEDC 270
Query: 128 IKNPILSDLI 137
++ PIL +L+
Sbjct: 271 LRRPILKELL 280
>gi|228941354|ref|ZP_04103906.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228974286|ref|ZP_04134855.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228980879|ref|ZP_04141183.1| Stage III sporulation protein AA [Bacillus thuringiensis Bt407]
gi|384188264|ref|YP_005574160.1| stage III sporulation protein AA [Bacillus thuringiensis serovar
chinensis CT-43]
gi|410676583|ref|YP_006928954.1| stage III sporulation protein AA [Bacillus thuringiensis Bt407]
gi|423385698|ref|ZP_17362954.1| stage III sporulation protein AA [Bacillus cereus BAG1X1-2]
gi|423527946|ref|ZP_17504391.1| stage III sporulation protein AA [Bacillus cereus HuB1-1]
gi|452200654|ref|YP_007480735.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|228778815|gb|EEM27078.1| Stage III sporulation protein AA [Bacillus thuringiensis Bt407]
gi|228785336|gb|EEM33346.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228818280|gb|EEM64353.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|326941973|gb|AEA17869.1| stage III sporulation protein AA [Bacillus thuringiensis serovar
chinensis CT-43]
gi|401635754|gb|EJS53509.1| stage III sporulation protein AA [Bacillus cereus BAG1X1-2]
gi|402451609|gb|EJV83428.1| stage III sporulation protein AA [Bacillus cereus HuB1-1]
gi|409175712|gb|AFV20017.1| stage III sporulation protein AA [Bacillus thuringiensis Bt407]
gi|452106047|gb|AGG02987.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 308
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP GT
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIAGCVKGIPQYDFGT-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+++IVDEIG + ++ A GV L +AHG E
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYE 255
Query: 126 NIIKNPILSDLI 137
++++ P L ++
Sbjct: 256 DVVRRPSLKAVL 267
>gi|206971017|ref|ZP_03231968.1| stage III sporulation protein AA [Bacillus cereus AH1134]
gi|218233741|ref|YP_002368996.1| stage III sporulation protein AA [Bacillus cereus B4264]
gi|228922948|ref|ZP_04086242.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228954479|ref|ZP_04116504.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228960461|ref|ZP_04122112.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|229047889|ref|ZP_04193465.1| Stage III sporulation protein AA [Bacillus cereus AH676]
gi|229071700|ref|ZP_04204916.1| Stage III sporulation protein AA [Bacillus cereus F65185]
gi|229081453|ref|ZP_04213953.1| Stage III sporulation protein AA [Bacillus cereus Rock4-2]
gi|229111668|ref|ZP_04241218.1| Stage III sporulation protein AA [Bacillus cereus Rock1-15]
gi|229129473|ref|ZP_04258444.1| Stage III sporulation protein AA [Bacillus cereus BDRD-Cer4]
gi|229146768|ref|ZP_04275133.1| Stage III sporulation protein AA [Bacillus cereus BDRD-ST24]
gi|229152395|ref|ZP_04280587.1| Stage III sporulation protein AA [Bacillus cereus m1550]
gi|229180473|ref|ZP_04307815.1| Stage III sporulation protein AA [Bacillus cereus 172560W]
gi|229192406|ref|ZP_04319369.1| Stage III sporulation protein AA [Bacillus cereus ATCC 10876]
gi|296504681|ref|YP_003666381.1| stage III sporulation protein AA [Bacillus thuringiensis BMB171]
gi|423412001|ref|ZP_17389121.1| stage III sporulation protein AA [Bacillus cereus BAG3O-2]
gi|423426330|ref|ZP_17403361.1| stage III sporulation protein AA [Bacillus cereus BAG3X2-2]
gi|423432213|ref|ZP_17409217.1| stage III sporulation protein AA [Bacillus cereus BAG4O-1]
gi|423437648|ref|ZP_17414629.1| stage III sporulation protein AA [Bacillus cereus BAG4X12-1]
gi|423503117|ref|ZP_17479709.1| stage III sporulation protein AA [Bacillus cereus HD73]
gi|423582406|ref|ZP_17558517.1| stage III sporulation protein AA [Bacillus cereus VD014]
gi|423585324|ref|ZP_17561411.1| stage III sporulation protein AA [Bacillus cereus VD045]
gi|423630919|ref|ZP_17606666.1| stage III sporulation protein AA [Bacillus cereus VD154]
gi|423640723|ref|ZP_17616341.1| stage III sporulation protein AA [Bacillus cereus VD166]
gi|423650061|ref|ZP_17625631.1| stage III sporulation protein AA [Bacillus cereus VD169]
gi|423657139|ref|ZP_17632438.1| stage III sporulation protein AA [Bacillus cereus VD200]
gi|449091154|ref|YP_007423595.1| stage III sporulation protein AA [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|206733789|gb|EDZ50960.1| stage III sporulation protein AA [Bacillus cereus AH1134]
gi|218161698|gb|ACK61690.1| stage III sporulation protein AA [Bacillus cereus B4264]
gi|228590983|gb|EEK48839.1| Stage III sporulation protein AA [Bacillus cereus ATCC 10876]
gi|228602897|gb|EEK60376.1| Stage III sporulation protein AA [Bacillus cereus 172560W]
gi|228631003|gb|EEK87640.1| Stage III sporulation protein AA [Bacillus cereus m1550]
gi|228636596|gb|EEK93061.1| Stage III sporulation protein AA [Bacillus cereus BDRD-ST24]
gi|228654078|gb|EEL09945.1| Stage III sporulation protein AA [Bacillus cereus BDRD-Cer4]
gi|228671803|gb|EEL27097.1| Stage III sporulation protein AA [Bacillus cereus Rock1-15]
gi|228701868|gb|EEL54354.1| Stage III sporulation protein AA [Bacillus cereus Rock4-2]
gi|228711431|gb|EEL63390.1| Stage III sporulation protein AA [Bacillus cereus F65185]
gi|228723346|gb|EEL74715.1| Stage III sporulation protein AA [Bacillus cereus AH676]
gi|228799225|gb|EEM46191.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228805136|gb|EEM51730.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228836719|gb|EEM82066.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|296325733|gb|ADH08661.1| stage III sporulation protein AA [Bacillus thuringiensis BMB171]
gi|401104069|gb|EJQ12046.1| stage III sporulation protein AA [Bacillus cereus BAG3O-2]
gi|401111077|gb|EJQ18976.1| stage III sporulation protein AA [Bacillus cereus BAG3X2-2]
gi|401116969|gb|EJQ24807.1| stage III sporulation protein AA [Bacillus cereus BAG4O-1]
gi|401120803|gb|EJQ28599.1| stage III sporulation protein AA [Bacillus cereus BAG4X12-1]
gi|401213285|gb|EJR20026.1| stage III sporulation protein AA [Bacillus cereus VD014]
gi|401233967|gb|EJR40453.1| stage III sporulation protein AA [Bacillus cereus VD045]
gi|401264286|gb|EJR70398.1| stage III sporulation protein AA [Bacillus cereus VD154]
gi|401279784|gb|EJR85706.1| stage III sporulation protein AA [Bacillus cereus VD166]
gi|401282479|gb|EJR88378.1| stage III sporulation protein AA [Bacillus cereus VD169]
gi|401289882|gb|EJR95586.1| stage III sporulation protein AA [Bacillus cereus VD200]
gi|402459338|gb|EJV91075.1| stage III sporulation protein AA [Bacillus cereus HD73]
gi|449024911|gb|AGE80074.1| stage III sporulation protein AA [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 308
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP GT
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIAGCVKGIPQYDFGT-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+++IVDEIG + ++ A GV L +AHG E
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYE 255
Query: 126 NIIKNPILSDLI 137
++++ P L ++
Sbjct: 256 DVVRRPSLKAVL 267
>gi|424836158|ref|ZP_18260815.1| stage III sporulation protein AA [Clostridium sporogenes PA 3679]
gi|365977560|gb|EHN13659.1| stage III sporulation protein AA [Clostridium sporogenes PA 3679]
Length = 307
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGTAR 65
+ + P GKTT++R+I++ +SD ++V ++D +EI G + +P +G
Sbjct: 141 IIISPPKCGKTTIIRDISKKISDGVDSLNLKGQKVSVIDERSEIAGSYNGVPQLDVGL-- 198
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + + + ++ A+ + PEVII DEIGT + + GV LI T HG +E
Sbjct: 199 RTDVLDNCPKSEGIVMAIRSMAPEVIICDEIGTYKDVESILIALNSGVSLITTIHGFGVE 258
Query: 126 NIIKNPILSDLI 137
+I P+ +++
Sbjct: 259 DIYNRPVFKEIV 270
>gi|218899357|ref|YP_002447768.1| stage III sporulation protein AA [Bacillus cereus G9842]
gi|228902712|ref|ZP_04066859.1| Stage III sporulation protein AA [Bacillus thuringiensis IBL 4222]
gi|228967235|ref|ZP_04128271.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
sotto str. T04001]
gi|402564392|ref|YP_006607116.1| stage III sporulation protein AA [Bacillus thuringiensis HD-771]
gi|423358766|ref|ZP_17336269.1| stage III sporulation protein AA [Bacillus cereus VD022]
gi|423561330|ref|ZP_17537606.1| stage III sporulation protein AA [Bacillus cereus MSX-A1]
gi|434377318|ref|YP_006611962.1| stage III sporulation protein AA [Bacillus thuringiensis HD-789]
gi|218541836|gb|ACK94230.1| stage III sporulation protein AA [Bacillus cereus G9842]
gi|228792604|gb|EEM40170.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228856899|gb|EEN01412.1| Stage III sporulation protein AA [Bacillus thuringiensis IBL 4222]
gi|401084638|gb|EJP92884.1| stage III sporulation protein AA [Bacillus cereus VD022]
gi|401201587|gb|EJR08452.1| stage III sporulation protein AA [Bacillus cereus MSX-A1]
gi|401793044|gb|AFQ19083.1| stage III sporulation protein AA [Bacillus thuringiensis HD-771]
gi|401875875|gb|AFQ28042.1| stage III sporulation protein AA [Bacillus thuringiensis HD-789]
Length = 308
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP GT
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIAGCVKGIPQYDFGT-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+++IVDEIG + ++ A GV L +AHG E
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYE 255
Query: 126 NIIKNPILSDLI 137
++++ P L ++
Sbjct: 256 DVVRRPSLKAVL 267
>gi|56420943|ref|YP_148261.1| stage III sporulation protein AA [Geobacillus kaustophilus HTA426]
gi|375009488|ref|YP_004983121.1| stage III sporulation protein AA [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|448238686|ref|YP_007402744.1| stage III sporulation protein [Geobacillus sp. GHH01]
gi|56380785|dbj|BAD76693.1| stage III sporulation protein AA [Geobacillus kaustophilus HTA426]
gi|359288337|gb|AEV20021.1| Stage III sporulation protein AA [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|445207528|gb|AGE22993.1| stage III sporulation protein [Geobacillus sp. GHH01]
Length = 306
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK----RVVIVDTSNEIGGD-GDIPHSAIGTARRM 67
+ +G P GKTT++R+ AR++S ++ +V IVD +EI G IP + G R+
Sbjct: 140 MIIGSPQTGKTTLLRDAARLISSGTRRIPAQKVAIVDERSEIAGCVKGIPQFSFGP--RL 197
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
V + + + M+ + + P+V+IVDEIG E ++ A A GV + T HG ++++
Sbjct: 198 DVLDACPKAEGMMMMIRSMSPDVMIVDEIGREEDSEAVLEAANAGVSVWTTVHGRNIQDV 257
Query: 128 IKNPILSDLI 137
+ P L ++
Sbjct: 258 WQRPTLGPVM 267
>gi|187779500|ref|ZP_02995973.1| hypothetical protein CLOSPO_03096 [Clostridium sporogenes ATCC
15579]
gi|187773125|gb|EDU36927.1| stage III sporulation protein AA [Clostridium sporogenes ATCC
15579]
Length = 310
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGTAR 65
+ + P GKTT++R+I++ +SD ++V ++D +EI G + +P +G
Sbjct: 144 IIISPPKCGKTTIIRDISKKISDGVDALNLKGQKVSVIDERSEIAGSYNGVPQLDVGL-- 201
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + + + ++ A+ + PEVII DEIGT + + GV LI T HG +E
Sbjct: 202 RTDVLDNCPKSEGIVMAIRSMAPEVIICDEIGTYKDVESILIALNSGVSLITTIHGFGVE 261
Query: 126 NIIKNPILSDLI 137
+I P+ +++
Sbjct: 262 DIYNRPVFKEIV 273
>gi|168184581|ref|ZP_02619245.1| stage III sporulation protein AA [Clostridium botulinum Bf]
gi|237795310|ref|YP_002862862.1| stage III sporulation protein AA [Clostridium botulinum Ba4 str.
657]
gi|182672334|gb|EDT84295.1| stage III sporulation protein AA [Clostridium botulinum Bf]
gi|229261521|gb|ACQ52554.1| stage III sporulation protein AA [Clostridium botulinum Ba4 str.
657]
Length = 307
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGTAR 65
+ + P GKTT++R+I++ +SD K+V ++D +EI G + +P +G
Sbjct: 141 IIISPPKCGKTTIIRDISKKISDGVDALSLKGKKVSVIDERSEIAGSYNGVPQLDVGL-- 198
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + + + ++ A+ + PEV+I DEIGT + + GV LI T HG +E
Sbjct: 199 RTDVLDNCPKSEGIVMAIRSMAPEVMICDEIGTYNDVESILIALNSGVSLITTIHGFGVE 258
Query: 126 NIIKNPILSDLI 137
+I P+ +++
Sbjct: 259 DIYNRPVFKEIV 270
>gi|229075902|ref|ZP_04208878.1| Stage III sporulation protein AA [Bacillus cereus Rock4-18]
gi|229098666|ref|ZP_04229606.1| Stage III sporulation protein AA [Bacillus cereus Rock3-29]
gi|229117691|ref|ZP_04247061.1| Stage III sporulation protein AA [Bacillus cereus Rock1-3]
gi|423377947|ref|ZP_17355231.1| stage III sporulation protein AA [Bacillus cereus BAG1O-2]
gi|423441067|ref|ZP_17417973.1| stage III sporulation protein AA [Bacillus cereus BAG4X2-1]
gi|423464141|ref|ZP_17440909.1| stage III sporulation protein AA [Bacillus cereus BAG6O-1]
gi|423533483|ref|ZP_17509901.1| stage III sporulation protein AA [Bacillus cereus HuB2-9]
gi|423547498|ref|ZP_17523856.1| stage III sporulation protein AA [Bacillus cereus HuB5-5]
gi|228665783|gb|EEL21255.1| Stage III sporulation protein AA [Bacillus cereus Rock1-3]
gi|228684745|gb|EEL38683.1| Stage III sporulation protein AA [Bacillus cereus Rock3-29]
gi|228707217|gb|EEL59414.1| Stage III sporulation protein AA [Bacillus cereus Rock4-18]
gi|401179219|gb|EJQ86392.1| stage III sporulation protein AA [Bacillus cereus HuB5-5]
gi|401636213|gb|EJS53967.1| stage III sporulation protein AA [Bacillus cereus BAG1O-2]
gi|402417728|gb|EJV50028.1| stage III sporulation protein AA [Bacillus cereus BAG4X2-1]
gi|402420408|gb|EJV52679.1| stage III sporulation protein AA [Bacillus cereus BAG6O-1]
gi|402463702|gb|EJV95402.1| stage III sporulation protein AA [Bacillus cereus HuB2-9]
Length = 308
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEF------QKRVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP GT
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVGTSKIPSCKVGIVDERSEIAGCVKGIPQYEFGT-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+V+IVDEIG + ++ A GV L +AHG +
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYD 255
Query: 126 NIIKNPILSDLI 137
+++K P L ++
Sbjct: 256 DVVKRPSLQAVL 267
>gi|229104823|ref|ZP_04235483.1| Stage III sporulation protein AA [Bacillus cereus Rock3-28]
gi|228678540|gb|EEL32757.1| Stage III sporulation protein AA [Bacillus cereus Rock3-28]
Length = 308
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEF------QKRVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP GT
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVGTSKIPSCKVGIVDERSEIAGCVKGIPQYEFGT-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+V+IVDEIG + ++ A GV L +AHG +
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYD 255
Query: 126 NIIKNPILSDLI 137
+++K P L ++
Sbjct: 256 DVVKRPSLQAVL 267
>gi|407706722|ref|YP_006830307.1| stage IV sporulation YqfD [Bacillus thuringiensis MC28]
gi|407384407|gb|AFU14908.1| Stage III sporulation protein AA [Bacillus thuringiensis MC28]
Length = 308
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEF------QKRVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP GT
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVGTSKIPSCKVGIVDERSEIAGCVKGIPQYEFGT-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+V+IVDEIG + ++ A GV L +AHG +
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYD 255
Query: 126 NIIKNPILSDLI 137
+++K P L ++
Sbjct: 256 DVVKRPSLQAVL 267
>gi|423448777|ref|ZP_17425656.1| stage III sporulation protein AA [Bacillus cereus BAG5O-1]
gi|401129371|gb|EJQ37054.1| stage III sporulation protein AA [Bacillus cereus BAG5O-1]
Length = 308
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEF------QKRVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP GT
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVGTSKIPSCKVGIVDERSEIAGCVKGIPQYEFGT-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+V+IVDEIG + ++ A GV L +AHG +
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYD 255
Query: 126 NIIKNPILSDLI 137
+++K P L ++
Sbjct: 256 DVVKRPSLQAVL 267
>gi|346306473|ref|ZP_08848629.1| stage III sporulation protein AA [Dorea formicigenerans 4_6_53AFAA]
gi|345897847|gb|EGX67744.1| stage III sporulation protein AA [Dorea formicigenerans 4_6_53AFAA]
Length = 316
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 68/130 (52%), Gaps = 7/130 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLS--DEFQK--RVVIVDTSNEIGGDG-DIPHSAIGTARRM 67
L V PG GKTT++R++ R +S +EF K V +VD +EI G + + +G R
Sbjct: 147 LLVSPPGCGKTTLLRDLIRQISEGNEFIKGMSVGVVDERSEIAGCYRGVAQNHLGI--RT 204
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
V + + + MI + + PEVI VDEIG + HA G ++ TAH + +E +
Sbjct: 205 DVLDGCPKAEGMIMLIRSMRPEVIAVDEIGGSEDVHAIEYAMHCGCRMLATAHADSMEEL 264
Query: 128 IKNPILSDLI 137
K P+ LI
Sbjct: 265 QKKPVFDRLI 274
>gi|229174870|ref|ZP_04302390.1| Stage III sporulation protein AA [Bacillus cereus MM3]
gi|228608538|gb|EEK65840.1| Stage III sporulation protein AA [Bacillus cereus MM3]
Length = 308
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP GT
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGCVKGIPQYDFGT-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+++IVDEIG + ++ A GV L +AHG +
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYD 255
Query: 126 NIIKNPILSDLI 137
+++K P L ++
Sbjct: 256 DVVKRPSLKAVL 267
>gi|423417881|ref|ZP_17394970.1| stage III sporulation protein AA [Bacillus cereus BAG3X2-1]
gi|401107052|gb|EJQ15009.1| stage III sporulation protein AA [Bacillus cereus BAG3X2-1]
Length = 308
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP GT
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGCVKGIPQYDFGT-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+++IVDEIG + ++ A GV L +AHG +
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYD 255
Query: 126 NIIKNPILSDLI 137
+++K P L ++
Sbjct: 256 DVVKRPSLQAVL 267
>gi|423622719|ref|ZP_17598497.1| stage III sporulation protein AA [Bacillus cereus VD148]
gi|401260839|gb|EJR67007.1| stage III sporulation protein AA [Bacillus cereus VD148]
Length = 308
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEF------QKRVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP GT
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVGTSKIPSCKVGIVDERSEIAGCVKGIPQYEFGT-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+V+IVDEIG + ++ A GV L +AHG +
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYD 255
Query: 126 NIIKNPILSDLI 137
+++K P L ++
Sbjct: 256 DVVKRPSLQAVL 267
>gi|423604153|ref|ZP_17580046.1| stage III sporulation protein AA [Bacillus cereus VD102]
gi|401245839|gb|EJR52192.1| stage III sporulation protein AA [Bacillus cereus VD102]
Length = 308
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP GT
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGCVKGIPQYDFGT-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+++IVDEIG + ++ A GV L +AHG +
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYD 255
Query: 126 NIIKNPILSDLI 137
+++K P L ++
Sbjct: 256 DVVKRPSLKAVL 267
>gi|42783312|ref|NP_980559.1| stage III sporulation protein AA [Bacillus cereus ATCC 10987]
gi|42739240|gb|AAS43167.1| stage III sporulation protein AA [Bacillus cereus ATCC 10987]
Length = 308
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP GT
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVSTSKIPSCKVGIVDERSEIAGCVKGIPQYDFGT-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+++IVDEIG + ++ A GV L +AHG +
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYD 255
Query: 126 NIIKNPILSDLI 137
+++K P L ++
Sbjct: 256 DVVKRPSLKAVL 267
>gi|229031842|ref|ZP_04187830.1| Stage III sporulation protein AA [Bacillus cereus AH1271]
gi|228729460|gb|EEL80449.1| Stage III sporulation protein AA [Bacillus cereus AH1271]
Length = 308
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP GT
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVSASNIPSCKVGIVDERSEIAGCVKGIPQYDFGT-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+++IVDEIG + ++ A GV L +AHG +
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYD 255
Query: 126 NIIKNPILSDLI 137
+++K P L ++
Sbjct: 256 DVVKRPSLKAVL 267
>gi|206976251|ref|ZP_03237159.1| stage III sporulation protein AA [Bacillus cereus H3081.97]
gi|217961683|ref|YP_002340253.1| stage III sporulation protein AA [Bacillus cereus AH187]
gi|222097640|ref|YP_002531697.1| stage III sporulation protein aa [Bacillus cereus Q1]
gi|229140927|ref|ZP_04269471.1| Stage III sporulation protein AA [Bacillus cereus BDRD-ST26]
gi|229198320|ref|ZP_04325027.1| Stage III sporulation protein AA [Bacillus cereus m1293]
gi|375286201|ref|YP_005106640.1| stage III sporulation protein AA [Bacillus cereus NC7401]
gi|402555673|ref|YP_006596944.1| stage III sporulation protein AA [Bacillus cereus FRI-35]
gi|423354691|ref|ZP_17332316.1| stage III sporulation protein AA [Bacillus cereus IS075]
gi|423373988|ref|ZP_17351327.1| stage III sporulation protein AA [Bacillus cereus AND1407]
gi|423566844|ref|ZP_17543091.1| stage III sporulation protein AA [Bacillus cereus MSX-A12]
gi|423574120|ref|ZP_17550239.1| stage III sporulation protein AA [Bacillus cereus MSX-D12]
gi|206745447|gb|EDZ56846.1| stage III sporulation protein AA [Bacillus cereus H3081.97]
gi|217064201|gb|ACJ78451.1| stage III sporulation protein AA [Bacillus cereus AH187]
gi|221241698|gb|ACM14408.1| stage III sporulation protein AA [Bacillus cereus Q1]
gi|228585199|gb|EEK43310.1| Stage III sporulation protein AA [Bacillus cereus m1293]
gi|228642503|gb|EEK98790.1| Stage III sporulation protein AA [Bacillus cereus BDRD-ST26]
gi|358354728|dbj|BAL19900.1| stage III sporulation protein AA [Bacillus cereus NC7401]
gi|401086239|gb|EJP94466.1| stage III sporulation protein AA [Bacillus cereus IS075]
gi|401094803|gb|EJQ02873.1| stage III sporulation protein AA [Bacillus cereus AND1407]
gi|401212689|gb|EJR19432.1| stage III sporulation protein AA [Bacillus cereus MSX-D12]
gi|401215359|gb|EJR22076.1| stage III sporulation protein AA [Bacillus cereus MSX-A12]
gi|401796883|gb|AFQ10742.1| stage III sporulation protein AA [Bacillus cereus FRI-35]
Length = 308
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP GT
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVSTSKIPSCKVGIVDERSEIAGCVKGIPQYDFGT-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+++IVDEIG + ++ A GV L +AHG +
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYD 255
Query: 126 NIIKNPILSDLI 137
+++K P L ++
Sbjct: 256 DVVKRPSLKAVL 267
>gi|452856213|ref|YP_007497896.1| ATP-binding stage III sporulation protein [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
gi|452080473|emb|CCP22236.1| ATP-binding stage III sporulation protein [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
Length = 307
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 7/129 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGD-GDIPHSAIGTARRM 67
L +G P GKTT++R++AR+ S + K+ IVD +EI G IP + G RR+
Sbjct: 140 LIIGPPQTGKTTLLRDLARLSSTGSKRIPAKKTGIVDERSEIAGCLRGIPQHSFG--RRI 197
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
V + + + ++ + + P+VIIVDEIG ++ A GV +I +AHG ++++
Sbjct: 198 DVLDACPKAEGLMMMIRSMSPDVIIVDEIGRMEDSQALLEALHAGVSVIVSAHGWNMKDL 257
Query: 128 IKNPILSDL 136
+K P L L
Sbjct: 258 VKRPSLKML 266
>gi|407979685|ref|ZP_11160495.1| stage III sporulation protein AA [Bacillus sp. HYC-10]
gi|407413697|gb|EKF35386.1| stage III sporulation protein AA [Bacillus sp. HYC-10]
Length = 303
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 69/131 (52%), Gaps = 7/131 (5%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ L +G P GKTT++R++AR++S ++ IVD +EI G +P + G
Sbjct: 134 NTLIIGPPQTGKTTLLRDLARLVSTGTTTISPRKTGIVDERSEIAGCIRGVPQHSFG--H 191
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + ++ + + PEVIIVDEIG + A GV +I +AHG LE
Sbjct: 192 RIDVLDACPKAEGLMMMIRSMSPEVIIVDEIGKSEDVQALLEAIHAGVTIIVSAHGYSLE 251
Query: 126 NIIKNPILSDL 136
++ K P L
Sbjct: 252 DLYKRPSFEPL 262
>gi|197301796|ref|ZP_03166866.1| hypothetical protein RUMLAC_00522 [Ruminococcus lactaris ATCC
29176]
gi|197299236|gb|EDY33766.1| stage III sporulation protein AA [Ruminococcus lactaris ATCC 29176]
Length = 313
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 70/130 (53%), Gaps = 7/130 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLSD--EFQK--RVVIVDTSNEIGGDG-DIPHSAIGTARRM 67
L + P GKTT++R++ R +SD E+ K V +VD +E+GG I + +GT R
Sbjct: 151 LIISPPCCGKTTLIRDLIRQISDGNEYVKGCSVGVVDERSELGGCYLGIAQNHLGT--RT 208
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
V + + + MI + + P+VI VDEIGT + HA + G +I + HG ++
Sbjct: 209 DVLDCCPKAEGMIMLIRSMSPQVIAVDEIGTVEDIHAIEYAMQCGCRMIASVHGLNMDEA 268
Query: 128 IKNPILSDLI 137
P+L DLI
Sbjct: 269 SNKPVLGDLI 278
>gi|291550239|emb|CBL26501.1| stage III sporulation protein AA [Ruminococcus torques L2-14]
Length = 314
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 69/130 (53%), Gaps = 7/130 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLSD--EFQK--RVVIVDTSNEIGGDG-DIPHSAIGTARRM 67
L + P GKTT++R++ R +SD E+ K V +VD +E+GG I + +GT R
Sbjct: 153 LIISPPCCGKTTLIRDLIRQISDGNEYIKGCSVGVVDERSELGGCYLGIAQNHLGT--RT 210
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
+ + + + MI + + P VI VDEIGT + HA + G LI + H ++
Sbjct: 211 DILDCCPKAEGMIMLIRSMAPRVIAVDEIGTSEDIHAIEYAMQCGCRLIASVHSLDMDEA 270
Query: 128 IKNPILSDLI 137
K PIL DLI
Sbjct: 271 SKKPILGDLI 280
>gi|404330166|ref|ZP_10970614.1| stage III sporulation protein AA [Sporolactobacillus vineae DSM
21990 = SL153]
Length = 315
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 7 HYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV------IVDTSNEIGGD-GDIPHS 59
H S LF+G P GKTT++R++AR +S+ +R + I+D +EI G G +P +
Sbjct: 140 HRWLSTLFIGAPQTGKTTLLRDLARFISNGLPERGIPGEKTGIIDERSEIAGCVGGVPQN 199
Query: 60 AIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 119
+G R V + + + M+ + + P V+ VDEIG + A GV ++ +A
Sbjct: 200 DVGP--RTDVLDACPKAEGMMMMIRSMSPGVLAVDEIGGREDMDALVEALNAGVTVLASA 257
Query: 120 HGEWLENIIKNP 131
H L+ + K P
Sbjct: 258 HAGSLDELRKRP 269
>gi|423521947|ref|ZP_17498420.1| stage III sporulation protein AA [Bacillus cereus HuA4-10]
gi|401176609|gb|EJQ83804.1| stage III sporulation protein AA [Bacillus cereus HuA4-10]
Length = 308
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP GT
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGCVKGIPQYDFGT-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+++IVDEIG + ++ A GV L +AHG +
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYD 255
Query: 126 NIIKNPILSDLI 137
+++K P L ++
Sbjct: 256 DVVKRPSLQAVL 267
>gi|394992156|ref|ZP_10384948.1| stage III sporulation protein AA [Bacillus sp. 916]
gi|429505855|ref|YP_007187039.1| stage III sporulation protein AA [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|393806985|gb|EJD68312.1| stage III sporulation protein AA [Bacillus sp. 916]
gi|429487445|gb|AFZ91369.1| stage III sporulation protein AA [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
Length = 307
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 7/129 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGD-GDIPHSAIGTARRM 67
L +G P GKTT++R++AR+ S + K+ IVD +EI G IP + G RR+
Sbjct: 140 LIIGPPQTGKTTLLRDLARLSSTGSKRIPAKKTGIVDERSEIAGCLRGIPQHSFG--RRI 197
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
V + + + ++ + + P+VIIVDEIG ++ A GV +I +AHG ++++
Sbjct: 198 DVLDACPKAEGLMMMIRSMSPDVIIVDEIGRMEDSQALLEALHAGVSVIVSAHGWNMKDL 257
Query: 128 IKNPILSDL 136
+K P L L
Sbjct: 258 VKRPSLKML 266
>gi|365159017|ref|ZP_09355204.1| stage III sporulation protein AA [Bacillus sp. 7_6_55CFAA_CT2]
gi|363626006|gb|EHL77015.1| stage III sporulation protein AA [Bacillus sp. 7_6_55CFAA_CT2]
Length = 308
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 68/128 (53%), Gaps = 9/128 (7%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP GT
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIAGCVKGIPQYDFGT-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+++IVDEIG + ++ A GV L +AHG E
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYE 255
Query: 126 NIIKNPIL 133
++++ P L
Sbjct: 256 DVVRRPSL 263
>gi|75763195|ref|ZP_00742959.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74489310|gb|EAO52762.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 208
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP GT
Sbjct: 38 MVIGPPQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIAGCVKGIPQYDFGT-- 95
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+++IVDEIG + ++ A GV L +AHG E
Sbjct: 96 RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYE 155
Query: 126 NIIKNPILSDLI 137
++++ P L ++
Sbjct: 156 DVVRRPSLKAVL 167
>gi|385265443|ref|ZP_10043530.1| ATPase family associated with various cellular activities (AAA)
[Bacillus sp. 5B6]
gi|385149939|gb|EIF13876.1| ATPase family associated with various cellular activities (AAA)
[Bacillus sp. 5B6]
Length = 307
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 7/129 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGD-GDIPHSAIGTARRM 67
L +G P GKTT++R++AR+ S + K+ IVD +EI G IP + G RR+
Sbjct: 140 LIIGPPQTGKTTLLRDLARLSSTGSKRIPAKKTGIVDERSEIAGCLRGIPQHSFG--RRI 197
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
V + + + ++ + + P+VIIVDEIG ++ A GV +I +AHG ++++
Sbjct: 198 DVLDACPKAEGLMMMIRSMSPDVIIVDEIGRMEDSQALLEALHAGVSVIVSAHGWNMKDL 257
Query: 128 IKNPILSDL 136
+K P L L
Sbjct: 258 VKRPSLKML 266
>gi|384182023|ref|YP_005567785.1| stage III sporulation protein AA [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|324328107|gb|ADY23367.1| stage III sporulation protein AA [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 308
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP GT
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIAGCVKGIPQYDFGT-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+++IVDEIG + ++ A GV L +AHG +
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYD 255
Query: 126 NIIKNPILSDLI 137
+++K P L ++
Sbjct: 256 DVVKRPSLKAVL 267
>gi|52141303|ref|YP_085526.1| stage III sporulation protein AA [Bacillus cereus E33L]
gi|118479384|ref|YP_896535.1| stage III sporulation protein AA [Bacillus thuringiensis str. Al
Hakam]
gi|196046314|ref|ZP_03113540.1| stage III sporulation protein AA [Bacillus cereus 03BB108]
gi|225866175|ref|YP_002751553.1| stage III sporulation protein AA [Bacillus cereus 03BB102]
gi|229186436|ref|ZP_04313600.1| Stage III sporulation protein AA [Bacillus cereus BGSC 6E1]
gi|301055686|ref|YP_003793897.1| stage III sporulation protein AA [Bacillus cereus biovar anthracis
str. CI]
gi|376268091|ref|YP_005120803.1| Stage III sporulation protein AA [Bacillus cereus F837/76]
gi|51974772|gb|AAU16322.1| stage III sporulation protein AA [Bacillus cereus E33L]
gi|118418609|gb|ABK87028.1| stage III sporulation protein AA [Bacillus thuringiensis str. Al
Hakam]
gi|196022784|gb|EDX61465.1| stage III sporulation protein AA [Bacillus cereus 03BB108]
gi|225790306|gb|ACO30523.1| stage III sporulation protein AA [Bacillus cereus 03BB102]
gi|228597063|gb|EEK54719.1| Stage III sporulation protein AA [Bacillus cereus BGSC 6E1]
gi|300377855|gb|ADK06759.1| stage III sporulation protein AA [Bacillus cereus biovar anthracis
str. CI]
gi|364513891|gb|AEW57290.1| Stage III sporulation protein AA [Bacillus cereus F837/76]
Length = 308
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP GT
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGCVKGIPQYDFGT-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+++IVDEIG + ++ A GV L +AHG +
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYD 255
Query: 126 NIIKNPILSDLI 137
+++K P L ++
Sbjct: 256 DVVKRPSLKAVL 267
>gi|423612416|ref|ZP_17588277.1| stage III sporulation protein AA [Bacillus cereus VD107]
gi|401246005|gb|EJR52357.1| stage III sporulation protein AA [Bacillus cereus VD107]
Length = 308
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP GT
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIAGCVKGIPQYDFGT-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+++IVDEIG + ++ A GV L +AHG +
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYD 255
Query: 126 NIIKNPILSDLI 137
+++K P L ++
Sbjct: 256 DVVKRPSLQAVL 267
>gi|384266059|ref|YP_005421766.1| Stage III sporulation protein AA [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387899079|ref|YP_006329375.1| stage III sporulation protein AA [Bacillus amyloliquefaciens Y2]
gi|380499412|emb|CCG50450.1| Stage III sporulation protein AA [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387173189|gb|AFJ62650.1| stage III sporulation protein AA [Bacillus amyloliquefaciens Y2]
Length = 307
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 7/129 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGD-GDIPHSAIGTARRM 67
L +G P GKTT++R++AR+ S + K+ IVD +EI G IP + G RR+
Sbjct: 140 LIIGPPQTGKTTLLRDLARLSSTGSKRIPAKKTGIVDERSEIAGCLRGIPQHSFG--RRI 197
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
V + + + ++ + + P+VIIVDEIG ++ A GV +I +AHG ++++
Sbjct: 198 DVLDACPKAEGLMMMIRSMSPDVIIVDEIGRMEDSQALLEALHAGVSVIVSAHGWNMKDL 257
Query: 128 IKNPILSDL 136
+K P L L
Sbjct: 258 VKRPSLKML 266
>gi|375362979|ref|YP_005131018.1| Stage III sporulation protein AA [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|421731034|ref|ZP_16170160.1| stage III sporulation protein AA [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|371568973|emb|CCF05823.1| Stage III sporulation protein AA [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|407075188|gb|EKE48175.1| stage III sporulation protein AA [Bacillus amyloliquefaciens subsp.
plantarum M27]
Length = 307
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 7/129 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGD-GDIPHSAIGTARRM 67
L +G P GKTT++R++AR+ S + K+ IVD +EI G IP + G RR+
Sbjct: 140 LIIGPPQTGKTTLLRDLARLSSTGSKRIPAKKTGIVDERSEIAGCLRGIPQHSFG--RRV 197
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
V + + + ++ + + P+VIIVDEIG ++ A GV +I +AHG ++++
Sbjct: 198 DVLDACPKAEGLMMMIRSMSPDVIIVDEIGRMEDSQALLEALHAGVSVIVSAHGWNMKDL 257
Query: 128 IKNPILSDL 136
+K P L L
Sbjct: 258 VKRPSLKML 266
>gi|210615799|ref|ZP_03290780.1| hypothetical protein CLONEX_02998 [Clostridium nexile DSM 1787]
gi|210150135|gb|EEA81144.1| hypothetical protein CLONEX_02998 [Clostridium nexile DSM 1787]
Length = 317
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 12/145 (8%)
Query: 2 VYDLLHYGKSI---LFVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGD- 53
++ + Y K + L + P GKTT++R++ R +SD + V +VD +E+GG
Sbjct: 141 IFPYITYNKQMYHTLIISPPRCGKTTLLRDVIRQISDGNRWIKGCTVGVVDERSELGGCY 200
Query: 54 -GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERG 112
G I ++ R + + + MI + + P+V+ VDEIG + + HA G
Sbjct: 201 LGVIQNN---LGMRTDILDRCPKADGMIMLIRSMAPQVVAVDEIGAKEDVHAIEYAMHCG 257
Query: 113 VMLIGTAHGEWLENIIKNPILSDLI 137
++ TAHG+ +E I K PI LI
Sbjct: 258 CKMLATAHGDSMEEICKKPIFEKLI 282
>gi|47569452|ref|ZP_00240133.1| stage III sporulation protein AA [Bacillus cereus G9241]
gi|47553867|gb|EAL12237.1| stage III sporulation protein AA [Bacillus cereus G9241]
Length = 308
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP GT
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGCVKGIPQYDFGT-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+++IVDEIG + ++ A GV L +AHG +
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYD 255
Query: 126 NIIKNPILSDLI 137
+++K P L ++
Sbjct: 256 DVVKRPSLKAVL 267
>gi|291542877|emb|CBL15987.1| Uncharacterized protein conserved in bacteria [Ruminococcus bromii
L2-63]
Length = 316
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 60/110 (54%), Gaps = 4/110 (3%)
Query: 12 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIP-HSAIGTARRMQVP 70
+L G P GKTTV+R++AR+LS + +K V ++D E+ G + IG V
Sbjct: 161 VLICGAPCSGKTTVLRDLARLLSTKGKKNVALIDERGELAGTASGKFQNDIGMC---DVY 217
Query: 71 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
+ + + M+ A+ + PE+II DEIG++ + +A GV +I + H
Sbjct: 218 DSYNKSEAMLHAIRSMAPEIIICDEIGSKEDIYAVEKSINCGVRIISSTH 267
>gi|229157792|ref|ZP_04285867.1| Stage III sporulation protein AA [Bacillus cereus ATCC 4342]
gi|228625749|gb|EEK82501.1| Stage III sporulation protein AA [Bacillus cereus ATCC 4342]
Length = 308
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP GT
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGCVKGIPQYDFGT-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+++IVDEIG + ++ A GV L +AHG +
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYD 255
Query: 126 NIIKNPILSDLI 137
+++K P L ++
Sbjct: 256 DVVKRPSLKAVL 267
>gi|423550060|ref|ZP_17526387.1| stage III sporulation protein AA [Bacillus cereus ISP3191]
gi|401189676|gb|EJQ96726.1| stage III sporulation protein AA [Bacillus cereus ISP3191]
Length = 308
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP GT
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGCVKGIPQYDFGT-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+++IVDEIG + ++ A GV L +AHG +
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYD 255
Query: 126 NIIKNPILSDLI 137
+++K P L ++
Sbjct: 256 DVVKRPSLKAVL 267
>gi|423483786|ref|ZP_17460476.1| stage III sporulation protein AA [Bacillus cereus BAG6X1-2]
gi|401141337|gb|EJQ48892.1| stage III sporulation protein AA [Bacillus cereus BAG6X1-2]
Length = 308
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP GT
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSRGVSASKISSCKVGIVDERSEIAGCVKGIPQYDFGT-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+V+IVDEIG + ++ A GV L +AHG +
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYD 255
Query: 126 NIIKNPILSDLI 137
+++K P L ++
Sbjct: 256 DVVKRPSLQAVL 267
>gi|229019412|ref|ZP_04176235.1| Stage III sporulation protein AA [Bacillus cereus AH1273]
gi|229025656|ref|ZP_04182062.1| Stage III sporulation protein AA [Bacillus cereus AH1272]
gi|423389488|ref|ZP_17366714.1| stage III sporulation protein AA [Bacillus cereus BAG1X1-3]
gi|228735654|gb|EEL86243.1| Stage III sporulation protein AA [Bacillus cereus AH1272]
gi|228741882|gb|EEL92059.1| Stage III sporulation protein AA [Bacillus cereus AH1273]
gi|401641579|gb|EJS59296.1| stage III sporulation protein AA [Bacillus cereus BAG1X1-3]
Length = 308
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 68/128 (53%), Gaps = 9/128 (7%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP GT
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGCVKGIPQYDFGT-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+++IVDEIG + ++ A GV L +AHG +
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYD 255
Query: 126 NIIKNPIL 133
+++K P L
Sbjct: 256 DVVKRPSL 263
>gi|30264268|ref|NP_846645.1| stage III sporulation protein AA [Bacillus anthracis str. Ames]
gi|47529711|ref|YP_021060.1| stage III sporulation protein AA [Bacillus anthracis str. 'Ames
Ancestor']
gi|49187095|ref|YP_030347.1| stage III sporulation protein AA [Bacillus anthracis str. Sterne]
gi|49480626|ref|YP_038254.1| stage III sporulation protein AA [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|65321579|ref|ZP_00394538.1| COG3854: Uncharacterized protein conserved in bacteria [Bacillus
anthracis str. A2012]
gi|165872983|ref|ZP_02217605.1| stage III sporulation protein AA [Bacillus anthracis str. A0488]
gi|167634531|ref|ZP_02392851.1| stage III sporulation protein AA [Bacillus anthracis str. A0442]
gi|167638567|ref|ZP_02396843.1| stage III sporulation protein AA [Bacillus anthracis str. A0193]
gi|170687461|ref|ZP_02878678.1| stage III sporulation protein AA [Bacillus anthracis str. A0465]
gi|170709034|ref|ZP_02899464.1| stage III sporulation protein AA [Bacillus anthracis str. A0389]
gi|177654810|ref|ZP_02936567.1| stage III sporulation protein AA [Bacillus anthracis str. A0174]
gi|190566110|ref|ZP_03019029.1| stage III sporulation protein AA [Bacillus anthracis str.
Tsiankovskii-I]
gi|218905329|ref|YP_002453163.1| stage III sporulation protein AA [Bacillus cereus AH820]
gi|227816969|ref|YP_002816978.1| stage III sporulation protein AA [Bacillus anthracis str. CDC 684]
gi|228916829|ref|ZP_04080394.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228935516|ref|ZP_04098334.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228947910|ref|ZP_04110197.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|229123713|ref|ZP_04252908.1| Stage III sporulation protein AA [Bacillus cereus 95/8201]
gi|229602406|ref|YP_002868487.1| stage III sporulation protein AA [Bacillus anthracis str. A0248]
gi|254683957|ref|ZP_05147817.1| stage III sporulation protein AA [Bacillus anthracis str.
CNEVA-9066]
gi|254721792|ref|ZP_05183581.1| stage III sporulation protein AA [Bacillus anthracis str. A1055]
gi|254736305|ref|ZP_05194011.1| stage III sporulation protein AA [Bacillus anthracis str. Western
North America USA6153]
gi|254741343|ref|ZP_05199030.1| stage III sporulation protein AA [Bacillus anthracis str. Kruger B]
gi|254754023|ref|ZP_05206058.1| stage III sporulation protein AA [Bacillus anthracis str. Vollum]
gi|254757894|ref|ZP_05209921.1| stage III sporulation protein AA [Bacillus anthracis str. Australia
94]
gi|386738084|ref|YP_006211265.1| Stage III sporulation protein AA [Bacillus anthracis str. H9401]
gi|421506452|ref|ZP_15953375.1| stage III sporulation protein AA [Bacillus anthracis str. UR-1]
gi|421638274|ref|ZP_16078870.1| stage III sporulation protein AA [Bacillus anthracis str. BF1]
gi|30258913|gb|AAP28131.1| stage III sporulation protein AA [Bacillus anthracis str. Ames]
gi|47504859|gb|AAT33535.1| stage III sporulation protein AA [Bacillus anthracis str. 'Ames
Ancestor']
gi|49181022|gb|AAT56398.1| stage III sporulation protein AA [Bacillus anthracis str. Sterne]
gi|49332182|gb|AAT62828.1| stage III sporulation protein AA [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|164711266|gb|EDR16821.1| stage III sporulation protein AA [Bacillus anthracis str. A0488]
gi|167513415|gb|EDR88785.1| stage III sporulation protein AA [Bacillus anthracis str. A0193]
gi|167529983|gb|EDR92718.1| stage III sporulation protein AA [Bacillus anthracis str. A0442]
gi|170126061|gb|EDS94958.1| stage III sporulation protein AA [Bacillus anthracis str. A0389]
gi|170668656|gb|EDT19402.1| stage III sporulation protein AA [Bacillus anthracis str. A0465]
gi|172080471|gb|EDT65557.1| stage III sporulation protein AA [Bacillus anthracis str. A0174]
gi|190563029|gb|EDV16995.1| stage III sporulation protein AA [Bacillus anthracis str.
Tsiankovskii-I]
gi|218535151|gb|ACK87549.1| stage III sporulation protein AA [Bacillus cereus AH820]
gi|227007321|gb|ACP17064.1| stage III sporulation protein AA [Bacillus anthracis str. CDC 684]
gi|228659848|gb|EEL15493.1| Stage III sporulation protein AA [Bacillus cereus 95/8201]
gi|228811897|gb|EEM58231.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228824268|gb|EEM70082.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228843016|gb|EEM88099.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|229266814|gb|ACQ48451.1| stage III sporulation protein AA [Bacillus anthracis str. A0248]
gi|384387936|gb|AFH85597.1| Stage III sporulation protein AA [Bacillus anthracis str. H9401]
gi|401823445|gb|EJT22592.1| stage III sporulation protein AA [Bacillus anthracis str. UR-1]
gi|403394700|gb|EJY91940.1| stage III sporulation protein AA [Bacillus anthracis str. BF1]
Length = 308
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP GT
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIAGCVKGIPQYDFGT-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+++IVDEIG + ++ A GV L +AHG +
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYD 255
Query: 126 NIIKNPILSDLI 137
+++K P L ++
Sbjct: 256 DVVKRPSLKAVL 267
>gi|337746932|ref|YP_004641094.1| stage III sporulation protein AA [Paenibacillus mucilaginosus
KNP414]
gi|336298121|gb|AEI41224.1| Stage III sporulation protein AA [Paenibacillus mucilaginosus
KNP414]
Length = 334
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 72/136 (52%), Gaps = 11/136 (8%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK--------RVVIVDTSNEIGGD-GDIPHSAIGT 63
L + P +GKTT++R++AR+LS + +V IVD +EI +P +G
Sbjct: 156 LVISPPQLGKTTLVRDLARLLSSGSAEAGIGGRSFKVGIVDERSEIAACVRGVPRFDVGP 215
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 123
R V + + + M+ + + PEV+I DEIG +A A G+ LI TAHG
Sbjct: 216 --RTDVLDGCPKAEGMMMMIRSMSPEVLIADEIGRSEDAAAIHEALHAGIGLIATAHGRD 273
Query: 124 LENIIKNPILSDLIGG 139
++++ + PIL +L+ G
Sbjct: 274 VDDVRRRPILKELLAG 289
>gi|386723401|ref|YP_006189727.1| stage III sporulation protein AA [Paenibacillus mucilaginosus K02]
gi|384090526|gb|AFH61962.1| stage III sporulation protein AA [Paenibacillus mucilaginosus K02]
Length = 334
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 72/136 (52%), Gaps = 11/136 (8%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK--------RVVIVDTSNEIGGD-GDIPHSAIGT 63
L + P +GKTT++R++AR+LS + +V IVD +EI +P +G
Sbjct: 156 LVISPPQLGKTTLVRDLARLLSSGSAEAGIGGRSFKVGIVDERSEIAACVRGVPRFDVGP 215
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 123
R V + + + M+ + + PEV+I DEIG +A A G+ LI TAHG
Sbjct: 216 --RTDVLDGCPKAEGMMMMIRSMSPEVLIADEIGRSEDAAAIHEALHAGIGLIATAHGRD 273
Query: 124 LENIIKNPILSDLIGG 139
++++ + PIL +L+ G
Sbjct: 274 VDDVRRRPILKELLAG 289
>gi|228929239|ref|ZP_04092266.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228830529|gb|EEM76139.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 308
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP GT
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIAGCVKGIPQYDFGT-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+++IVDEIG + ++ A GV L +AHG +
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYD 255
Query: 126 NIIKNPILSDLI 137
+++K P L ++
Sbjct: 256 DVVKRPSLKAVL 267
>gi|160893216|ref|ZP_02074004.1| hypothetical protein CLOL250_00762 [Clostridium sp. L2-50]
gi|156865299|gb|EDO58730.1| stage III sporulation protein AA [Clostridium sp. L2-50]
Length = 337
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 67/130 (51%), Gaps = 7/130 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGD-GDIPHSAIGTARRM 67
L + P GKTT++R++ R+LSD F + +VD +EIG +P + IG R
Sbjct: 157 LIISPPRCGKTTLLRDMIRMLSDGFPGFKGNTIGVVDERSEIGACYKGVPQNDIGI--RT 214
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
+ + + M+ + + P++I VDEIG+ + A S+ G LI T HG +++I
Sbjct: 215 DILDCCPKSYGMLMLIRSMSPQIIAVDEIGSRDDIDAIYSVINCGCKLIATVHGNSIDDI 274
Query: 128 IKNPILSDLI 137
P L L+
Sbjct: 275 RNRPGLRKLV 284
>gi|451346346|ref|YP_007444977.1| stage III sporulation protein AA [Bacillus amyloliquefaciens IT-45]
gi|449850104|gb|AGF27096.1| stage III sporulation protein AA [Bacillus amyloliquefaciens IT-45]
Length = 307
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 7/129 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGD-GDIPHSAIGTARRM 67
L +G P GKTT++R++AR+ S + K+ IVD +EI G IP + G RR+
Sbjct: 140 LIIGPPQTGKTTLLRDLARLSSTGSKRIPAKKTGIVDERSEIAGCLRGIPQHSFG--RRV 197
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
V + + + ++ + + P+VIIVDEIG ++ A GV +I +AHG ++++
Sbjct: 198 DVLDACPKAEGLMMMIRSMSPDVIIVDEIGRMEDSQALLEALHAGVSVIVSAHGWNMKDL 257
Query: 128 IKNPILSDL 136
+K P L L
Sbjct: 258 VKRPSLKML 266
>gi|226323219|ref|ZP_03798737.1| hypothetical protein COPCOM_00991 [Coprococcus comes ATCC 27758]
gi|225208409|gb|EEG90763.1| stage III sporulation protein AA [Coprococcus comes ATCC 27758]
Length = 305
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 70/130 (53%), Gaps = 7/130 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGD-GDIPHSAIGTARRM 67
+ + PG GKTT++R++ R +SD + + V +VD +EIGG +P + +G R
Sbjct: 145 MIISPPGGGKTTLLRDLVRQISDGNRWVEGRNVGVVDERSEIGGCYRGVPQNQLGM--RT 202
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
+ + + + M+ V + PEVI DEIGT + A G ++ T HG ++ I
Sbjct: 203 DILDNCPKAEGMMMLVRSMAPEVIAADEIGTAKDVEAIEYAMHCGATMLTTVHGSGMDEI 262
Query: 128 IKNPILSDLI 137
+ P++S+L+
Sbjct: 263 REKPLVSNLV 272
>gi|228987384|ref|ZP_04147504.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229093252|ref|ZP_04224370.1| Stage III sporulation protein AA [Bacillus cereus Rock3-42]
gi|228690226|gb|EEL44020.1| Stage III sporulation protein AA [Bacillus cereus Rock3-42]
gi|228772356|gb|EEM20802.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 308
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP GT
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIAGCVKGIPQYDFGT-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+++IVDEIG + ++ A GV L +AHG +
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYD 255
Query: 126 NIIKNPILSDLI 137
+++K P L ++
Sbjct: 256 DVVKRPSLKAVL 267
>gi|154686707|ref|YP_001421868.1| hypothetical protein RBAM_022760 [Bacillus amyloliquefaciens FZB42]
gi|154352558|gb|ABS74637.1| SpoIIIAA [Bacillus amyloliquefaciens FZB42]
Length = 307
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 7/129 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGD-GDIPHSAIGTARRM 67
L +G P GKTT++R++AR+ S + K+ IVD +EI G IP + G RR+
Sbjct: 140 LIIGPPQTGKTTLLRDLARLSSTGSKRIPAKKTGIVDERSEIAGCLRGIPQHSFG--RRI 197
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
V + + + ++ + + P+VIIVDEIG ++ A GV +I +AHG ++++
Sbjct: 198 DVLDACPKAEGLMMMIRSMSPDVIIVDEIGRMEDSQALLEALHAGVSVIVSAHGWDMKDL 257
Query: 128 IKNPILSDL 136
+K P L L
Sbjct: 258 VKRPSLKML 266
>gi|379720795|ref|YP_005312926.1| Stage III sporulation protein AA [Paenibacillus mucilaginosus 3016]
gi|378569467|gb|AFC29777.1| Stage III sporulation protein AA [Paenibacillus mucilaginosus 3016]
Length = 342
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 72/136 (52%), Gaps = 11/136 (8%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK--------RVVIVDTSNEIGGD-GDIPHSAIGT 63
L + P +GKTT++R++AR+LS + +V IVD +EI +P +G
Sbjct: 164 LVISPPQLGKTTLVRDLARLLSSGSAEAGIGGRSFKVGIVDERSEIAACVRGVPRFDVGP 223
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 123
R V + + + M+ + + PEV+I DEIG +A A G+ LI TAHG
Sbjct: 224 --RTDVLDGCPKAEGMMMMIRSMSPEVLIADEIGRSEDAAAIHEALHAGIGLIATAHGRD 281
Query: 124 LENIIKNPILSDLIGG 139
++++ + PIL +L+ G
Sbjct: 282 VDDVRRRPILKELLAG 297
>gi|196041563|ref|ZP_03108855.1| stage III sporulation protein AA [Bacillus cereus NVH0597-99]
gi|196027551|gb|EDX66166.1| stage III sporulation protein AA [Bacillus cereus NVH0597-99]
Length = 308
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP GT
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGCVKGIPQYDFGT-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+++IVDEIG + ++ A GV L +AHG +
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAILEAVHAGVQLFISAHGFSYD 255
Query: 126 NIIKNPILSDLI 137
+++K P L ++
Sbjct: 256 DVVKRPSLKAVL 267
>gi|402298077|ref|ZP_10817801.1| stage III sporulation protein AA [Bacillus alcalophilus ATCC 27647]
gi|401726721|gb|EJS99937.1| stage III sporulation protein AA [Bacillus alcalophilus ATCC 27647]
Length = 310
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 71/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQKR------VVIVDTSNEIGGD-GDIPHSAIGTAR 65
L +G P GKTT++R+IAR++S+ +K+ V IVD +EI +P +G
Sbjct: 146 LIIGPPQTGKTTLLRDIARLISEGDRKKGIQPLKVGIVDERSEIAASVKGVPQHRLGD-- 203
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + P+VIIVDEIG E + A GV +I TAHG +
Sbjct: 204 RVDVLDGCPKVEGMMMLIRTMSPDVIIVDEIGREEDRIAIEEAMYAGVKVITTAHGHSVH 263
Query: 126 NIIKNPILSDLI 137
++ + P L LI
Sbjct: 264 DLKRRPALKGLI 275
>gi|423541261|ref|ZP_17517652.1| stage III sporulation protein AA [Bacillus cereus HuB4-10]
gi|401172449|gb|EJQ79670.1| stage III sporulation protein AA [Bacillus cereus HuB4-10]
Length = 308
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEF------QKRVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP GT
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVGTSKIPSCKVGIVDERSEIAGCVKGIPQYEFGT-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+V+IVDEIG + + A GV L +AHG +
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRKEDTEAIMEAVHAGVQLFISAHGFSYD 255
Query: 126 NIIKNPILSDLI 137
+++K P L ++
Sbjct: 256 DVVKRPSLQAVL 267
>gi|261417733|ref|YP_003251415.1| stage III sporulation protein AA [Geobacillus sp. Y412MC61]
gi|319767455|ref|YP_004132956.1| stage III sporulation protein AA [Geobacillus sp. Y412MC52]
gi|261374190|gb|ACX76933.1| stage III sporulation protein AA [Geobacillus sp. Y412MC61]
gi|317112321|gb|ADU94813.1| stage III sporulation protein AA [Geobacillus sp. Y412MC52]
Length = 306
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 71/130 (54%), Gaps = 7/130 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEF----QKRVVIVDTSNEIGGD-GDIPHSAIGTARRM 67
+ +G P GKTT++R+ AR++S ++V IVD +EI G IP + G R+
Sbjct: 140 MIIGSPQTGKTTLLRDAARLISSGTGRIPAQKVAIVDERSEIAGCVKGIPQFSFGP--RL 197
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
V + + + M+ + + P+V+IVDEIG E ++ A A GV + T HG ++++
Sbjct: 198 DVLDACPKAEGMMMMIRSMSPDVMIVDEIGREEDSEAVLEAANAGVSVWTTVHGRNIQDV 257
Query: 128 IKNPILSDLI 137
+ P L ++
Sbjct: 258 WQRPTLGPVM 267
>gi|196034946|ref|ZP_03102353.1| stage III sporulation protein AA [Bacillus cereus W]
gi|195992485|gb|EDX56446.1| stage III sporulation protein AA [Bacillus cereus W]
Length = 308
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP GT
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIAGCVKGIPQYDFGT-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+++IVDEIG + ++ A GV L +AHG +
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYD 255
Query: 126 NIIKNPILSDLI 137
+++K P L ++
Sbjct: 256 DVVKRPSLKAVL 267
>gi|297529425|ref|YP_003670700.1| stage III sporulation protein AA [Geobacillus sp. C56-T3]
gi|297252677|gb|ADI26123.1| stage III sporulation protein AA [Geobacillus sp. C56-T3]
Length = 306
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 71/130 (54%), Gaps = 7/130 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK----RVVIVDTSNEIGGD-GDIPHSAIGTARRM 67
+ +G P GKTT++R+ AR++S ++ +V IVD +EI G IP + G R+
Sbjct: 140 MIIGSPQTGKTTLLRDAARLISSGTRRIPAQKVAIVDERSEIAGCVKGIPQFSFGP--RL 197
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
V + + + M+ + P+V+IVDEIG E ++ A A GV + T HG ++++
Sbjct: 198 DVLDACPKAEGMMMMIRAMSPDVMIVDEIGREEDSEAVLEAANAGVSVWTTVHGRNIQDV 257
Query: 128 IKNPILSDLI 137
+ P L ++
Sbjct: 258 WQRPTLGPVM 267
>gi|389571702|ref|ZP_10161791.1| stage III sporulation protein AA [Bacillus sp. M 2-6]
gi|388428596|gb|EIL86392.1| stage III sporulation protein AA [Bacillus sp. M 2-6]
Length = 307
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 68/129 (52%), Gaps = 7/129 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGD-GDIPHSAIGTARRM 67
L +G P GKTT++R++AR++S ++ IVD +EI G +P + G R+
Sbjct: 140 LIIGPPQTGKTTLLRDLARLVSTGTTAISPRKTGIVDERSEIAGCIRGVPQHSFG--HRI 197
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
V + + + ++ + + PEVIIVDEIG + A GV +I +AHG LE++
Sbjct: 198 DVLDACPKAEGLMMMIRSMSPEVIIVDEIGKSEDVQALLEAIHAGVTIIVSAHGYSLEDL 257
Query: 128 IKNPILSDL 136
K P L
Sbjct: 258 SKRPSFEPL 266
>gi|291544826|emb|CBL17935.1| Uncharacterized protein conserved in bacteria [Ruminococcus
champanellensis 18P13]
Length = 295
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 65/129 (50%), Gaps = 5/129 (3%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGG-DGDIPHSAIGTARRMQ 68
+S+L +G P GKTT++R++ R+L + RV +VD E+ IP +G +
Sbjct: 145 QSVLLLGPPASGKTTMLRDLCRLLGSRY--RVSVVDERGELAACRQGIPTHDLGAMTDVF 202
Query: 69 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 128
P Q M A+ P+ II DE+G+EAE A + GV ++GTAH L
Sbjct: 203 DGYPKAQG--MQIALRVMTPDYIICDELGSEAETTAVLASMNSGVSILGTAHAGSLAQAE 260
Query: 129 KNPILSDLI 137
+ P L L+
Sbjct: 261 RRPQLRCLL 269
>gi|23099349|ref|NP_692815.1| stage III sporulation protein AA [Oceanobacillus iheyensis HTE831]
gi|22777578|dbj|BAC13850.1| stage III sporulation protein AA (mutants block sporulation after
engulfment) [Oceanobacillus iheyensis HTE831]
Length = 327
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ-----KRVVIVDTSNEIGGD-GDIPHSAIGTARR 66
+ +G P GKTT++R++ R+++ Q K+V IVD +EI IP +GT R
Sbjct: 142 MVIGPPQSGKTTIIRDLTRMIATIDQPMNRSKKVGIVDERSEIAASLQGIPQHDVGT--R 199
Query: 67 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 126
+ + + + M+ V + P++I+VDEIGT+ + A GV +I TAH ++
Sbjct: 200 TDIMDACPKAEGMMMLVRSMSPDIIVVDEIGTDHDVEALLEAIHTGVTIICTAHANQWDD 259
Query: 127 IIKNPILSDLI 137
+ K P + LI
Sbjct: 260 LNKRPSMKRLI 270
>gi|333370541|ref|ZP_08462536.1| stage III sporulation protein AA [Desmospora sp. 8437]
gi|332977550|gb|EGK14320.1| stage III sporulation protein AA [Desmospora sp. 8437]
Length = 321
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 6/132 (4%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLSDE---FQKRVVIVDTSNEIGGDGD-IPHSAIGTAR 65
++IL V P GKTT++R++ R++S ++V +VD +EI G + +P +G
Sbjct: 151 ENILIVSPPQCGKTTLLRDLTRIVSSGETIPSRKVGVVDERSEIAGCVEGVPQHDVGP-- 208
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + + + M+ + + PE+++VDEIG + A GV L TAHG +E
Sbjct: 209 RTDVLDGCPKAEGMMMLIRSMSPELLVVDEIGRREDGEAVFEAVHAGVSLFTTAHGSSME 268
Query: 126 NIIKNPILSDLI 137
+ + P ++ L+
Sbjct: 269 EVCRRPGIAQLV 280
>gi|451819552|ref|YP_007455753.1| stage III sporulation protein AA [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451785531|gb|AGF56499.1| stage III sporulation protein AA [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 308
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 73/132 (55%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSD------EFQKRVVIVDTSNEIGGDG-DIPHSAIGTAR 65
+ + P GKTT++R+IAR +S+ K+VV+VD +EI IP S +G
Sbjct: 144 IIISPPKCGKTTIIRDIARNISNGVFSLGVSGKKVVVVDERSEIAACHLGIPQSNLGL-- 201
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + L+ + +I A+ + PEV+I DEIGT+ + A GV +I T HG +E
Sbjct: 202 RTDVLDNCLKREGLIMAIRSLSPEVLICDEIGTKGDTEALMMAFNSGVNIITTIHGFTVE 261
Query: 126 NIIKNPILSDLI 137
++ K + SDL+
Sbjct: 262 DLYKRKVFSDLL 273
>gi|157692942|ref|YP_001487404.1| stage III sporulation protein AA [Bacillus pumilus SAFR-032]
gi|157681700|gb|ABV62844.1| stage III sporulation protein AA [Bacillus pumilus SAFR-032]
Length = 307
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 7/131 (5%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ L +G P GKTT++R+IAR+ S + K+ I+D +EI G +P G
Sbjct: 138 NTLIIGPPQTGKTTLLRDIARLASTGTKAIPPKKTGIIDERSEIAGCIRGVPQHQFG--H 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + ++ + + PEV+IVDEIG + A GV +I + HG LE
Sbjct: 196 RVDVLDACPKAEGLMMMIRSMSPEVMIVDEIGKSEDVQALLEAIHAGVSIIVSVHGYSLE 255
Query: 126 NIIKNPILSDL 136
++ K P L L
Sbjct: 256 DVYKRPSLKPL 266
>gi|153816458|ref|ZP_01969126.1| hypothetical protein RUMTOR_02711 [Ruminococcus torques ATCC 27756]
gi|317500219|ref|ZP_07958450.1| stage III sporulation protein AA [Lachnospiraceae bacterium
8_1_57FAA]
gi|331087553|ref|ZP_08336484.1| stage III sporulation protein AA [Lachnospiraceae bacterium
3_1_46FAA]
gi|145846200|gb|EDK23118.1| stage III sporulation protein AA [Ruminococcus torques ATCC 27756]
gi|316898390|gb|EFV20430.1| stage III sporulation protein AA [Lachnospiraceae bacterium
8_1_57FAA]
gi|330400693|gb|EGG80297.1| stage III sporulation protein AA [Lachnospiraceae bacterium
3_1_46FAA]
Length = 313
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 70/130 (53%), Gaps = 7/130 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLSD--EFQK--RVVIVDTSNEIGGD-GDIPHSAIGTARRM 67
L + P GKTT++R++ R +SD E+ K V +VD +EIGG I + +G R
Sbjct: 152 LIISPPRCGKTTLLRDLIRQISDGNEYVKGCSVGVVDERSEIGGCYMGIVQNNLGM--RT 209
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
V + + + MI + + P+V+ VDEIGT + HA + G LI + HG +E
Sbjct: 210 DVLDCCPKAEGMIMLIRSMSPQVVAVDEIGTAEDIHAIEYAMQCGCKLIASVHGMDMEEA 269
Query: 128 IKNPILSDLI 137
+ P+L ++I
Sbjct: 270 ARKPVLGEMI 279
>gi|153855227|ref|ZP_01996393.1| hypothetical protein DORLON_02407 [Dorea longicatena DSM 13814]
gi|149752226|gb|EDM62157.1| stage III sporulation protein AA [Dorea longicatena DSM 13814]
Length = 317
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 15/135 (11%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGDGDIPHSAIGTAR--- 65
L V PG GKTT++R++ R +S+ V +VD +EIGG +G A+
Sbjct: 150 LIVSPPGCGKTTMLRDLIRQISEGNSWIPGLAVGVVDERSEIGG------CYMGVAQNHL 203
Query: 66 --RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 123
R + + + + MI + + P+VI VDEIGT + HA G ++ T H E
Sbjct: 204 GIRTDILDGCPKAEGMIMLIRSMGPQVIAVDEIGTPEDVHAIEYAMHCGCKMLATVHAES 263
Query: 124 LENIIKNPILSDLIG 138
+E + K P+ + +IG
Sbjct: 264 MEELRKKPLFNRMIG 278
>gi|423400957|ref|ZP_17378130.1| stage III sporulation protein AA [Bacillus cereus BAG2X1-2]
gi|423478338|ref|ZP_17455053.1| stage III sporulation protein AA [Bacillus cereus BAG6X1-1]
gi|401653947|gb|EJS71490.1| stage III sporulation protein AA [Bacillus cereus BAG2X1-2]
gi|402428500|gb|EJV60597.1| stage III sporulation protein AA [Bacillus cereus BAG6X1-1]
Length = 308
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP G
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGCVKGIPQYDFGA-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+V+IVDEIG + ++ A GV L +AHG +
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYD 255
Query: 126 NIIKNPILSDLI 137
+++K P L ++
Sbjct: 256 DVVKRPSLKAVL 267
>gi|423452500|ref|ZP_17429353.1| stage III sporulation protein AA [Bacillus cereus BAG5X1-1]
gi|401140138|gb|EJQ47695.1| stage III sporulation protein AA [Bacillus cereus BAG5X1-1]
Length = 308
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP G
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGCVKGIPQYDFGA-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+V+IVDEIG + ++ A GV L +AHG +
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYD 255
Query: 126 NIIKNPILSDLI 137
+++K P L ++
Sbjct: 256 DVVKRPSLQAVL 267
>gi|260588113|ref|ZP_05854026.1| stage III sporulation protein AA [Blautia hansenii DSM 20583]
gi|331082319|ref|ZP_08331445.1| stage III sporulation protein AA [Lachnospiraceae bacterium
6_1_63FAA]
gi|260541640|gb|EEX22209.1| stage III sporulation protein AA [Blautia hansenii DSM 20583]
gi|330400805|gb|EGG80406.1| stage III sporulation protein AA [Lachnospiraceae bacterium
6_1_63FAA]
Length = 323
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 68/130 (52%), Gaps = 7/130 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK----RVVIVDTSNEIGGDGD-IPHSAIGTARRM 67
L + P GKTT++R++ R +S+ + V +VD +EI G IP + +G R
Sbjct: 154 LIISPPRCGKTTLLRDLIRQVSNGNRYMPGVSVGVVDERSEIAGSYQGIPQNDLGI--RT 211
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
V + + + M+ + + PEV+ VDE+G + HA S+ G L T HG +E+I
Sbjct: 212 DVLDCCPKAEGMMMLIRSMSPEVVAVDELGDYEDIHAIESVIHCGCKLFATVHGSSIEDI 271
Query: 128 IKNPILSDLI 137
+ P+L L+
Sbjct: 272 KRKPLLQRLM 281
>gi|423615466|ref|ZP_17591300.1| stage III sporulation protein AA [Bacillus cereus VD115]
gi|401260003|gb|EJR66176.1| stage III sporulation protein AA [Bacillus cereus VD115]
Length = 308
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEF------QKRVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP GT
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVGTSKIPSCKVGIVDERSEIAGCVKGIPQYEFGT-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+V+IVDEIG + ++ A GV L +AHG +
Sbjct: 196 RLDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYD 255
Query: 126 NIIKNPILSDLI 137
++ K P L ++
Sbjct: 256 DVEKRPSLQAVL 267
>gi|229168937|ref|ZP_04296654.1| Stage III sporulation protein AA [Bacillus cereus AH621]
gi|228614529|gb|EEK71637.1| Stage III sporulation protein AA [Bacillus cereus AH621]
Length = 308
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP G
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGCVKGIPQYDFGV-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+V+IVDEIG + ++ A GV L +AHG +
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYD 255
Query: 126 NIIKNPILSDLI 137
+++K P L ++
Sbjct: 256 DVVKRPSLQAVL 267
>gi|423591808|ref|ZP_17567839.1| stage III sporulation protein AA [Bacillus cereus VD048]
gi|401231941|gb|EJR38443.1| stage III sporulation protein AA [Bacillus cereus VD048]
Length = 308
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP G
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGCVKGIPQYDFGV-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+V+IVDEIG + ++ A GV L +AHG +
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYD 255
Query: 126 NIIKNPILSDLI 137
+++K P L ++
Sbjct: 256 DVVKRPSLQAVL 267
>gi|15615360|ref|NP_243663.1| mutants block sporulation after engulfment [Bacillus halodurans
C-125]
gi|10175418|dbj|BAB06516.1| mutants block sporulation after engulfment [Bacillus halodurans
C-125]
Length = 309
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 74/134 (55%), Gaps = 9/134 (6%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDEFQKR------VVIVDTSNEIGGD-GDIPHSAIGT 63
+ L +G P GKTT++R++AR++S + ++ V IVD +EI +P +G
Sbjct: 143 NTLLIGPPQSGKTTLLRDLARLVSVGWSRKGIPPLKVGIVDERSEIAAAVKGVPQHELGM 202
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 123
R+ V + + + M+ + + P+V+IVDEIG + + A + GV ++ TAHG
Sbjct: 203 --RVDVLDGCPKAEGMMMMIRSMSPDVLIVDEIGRKEDCVAIQEALHAGVKVMTTAHGYE 260
Query: 124 LENIIKNPILSDLI 137
LE + K P + +L+
Sbjct: 261 LEEVSKRPAIRELL 274
>gi|225018840|ref|ZP_03708032.1| hypothetical protein CLOSTMETH_02790 [Clostridium methylpentosum
DSM 5476]
gi|224948400|gb|EEG29609.1| hypothetical protein CLOSTMETH_02790 [Clostridium methylpentosum
DSM 5476]
Length = 295
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 70/136 (51%), Gaps = 9/136 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPE 71
L VG P GKTT++++I R + D ++ +VD+ E+ +P + +G A V +
Sbjct: 145 LLVGAPASGKTTLLKDIVRQMPDH---KITVVDSRGELAACVCGVPQNDVGNA---DVLD 198
Query: 72 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 131
+ + M+ A+ + P++I+ DEIG +A A GV LI TAH LE + K
Sbjct: 199 GWQKAEGMMLAIRSMAPDIIVCDEIGDRRDAQAVECCMNAGVKLIATAHAGSLEELTKRR 258
Query: 132 ILSDL--IGGVDTVTL 145
+ D+ +G + + L
Sbjct: 259 HIMDILSLGAFENIVL 274
>gi|423457622|ref|ZP_17434419.1| stage III sporulation protein AA [Bacillus cereus BAG5X2-1]
gi|401148006|gb|EJQ55499.1| stage III sporulation protein AA [Bacillus cereus BAG5X2-1]
Length = 308
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP G
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGCVKGIPQYDFGA-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+++IVDEIG + ++ A GV L +AHG +
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYD 255
Query: 126 NIIKNPILSDLI 137
+++K P L ++
Sbjct: 256 DVVKRPSLKAVL 267
>gi|423489380|ref|ZP_17466062.1| stage III sporulation protein AA [Bacillus cereus BtB2-4]
gi|423495103|ref|ZP_17471747.1| stage III sporulation protein AA [Bacillus cereus CER057]
gi|423498103|ref|ZP_17474720.1| stage III sporulation protein AA [Bacillus cereus CER074]
gi|423598486|ref|ZP_17574486.1| stage III sporulation protein AA [Bacillus cereus VD078]
gi|401151196|gb|EJQ58648.1| stage III sporulation protein AA [Bacillus cereus CER057]
gi|401161390|gb|EJQ68757.1| stage III sporulation protein AA [Bacillus cereus CER074]
gi|401236756|gb|EJR43213.1| stage III sporulation protein AA [Bacillus cereus VD078]
gi|402431616|gb|EJV63680.1| stage III sporulation protein AA [Bacillus cereus BtB2-4]
Length = 308
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP G
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGISASKIPSCKVGIVDERSEIAGCVKGIPQYDFGV-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+++IVDEIG + ++ A GV L +AHG +
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYD 255
Query: 126 NIIKNPILSDLI 137
+++K P L ++
Sbjct: 256 DVVKRPSLQAVL 267
>gi|336437972|ref|ZP_08617616.1| hypothetical protein HMPREF0990_00010 [Lachnospiraceae bacterium
1_1_57FAA]
gi|336019390|gb|EGN49115.1| hypothetical protein HMPREF0990_00010 [Lachnospiraceae bacterium
1_1_57FAA]
Length = 162
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 7/130 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLSD--EFQK--RVVIVDTSNEIGGD-GDIPHSAIGTARRM 67
+ + P GKTT++R++ R +SD E+ K V +VD +EIGG I + +G R
Sbjct: 1 MIISPPRCGKTTLLRDLIRQISDGNEYVKGCSVGVVDERSEIGGCYMGIVQNNLGM--RT 58
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
V + + + MI + + P+V+ VDEIGT + HA + G LI + HG +E
Sbjct: 59 DVLDCCPKAEGMIMLIRSMSPQVVAVDEIGTAEDIHAIEYAMQCGCKLIASVHGMDMEEA 118
Query: 128 IKNPILSDLI 137
+ P+L ++I
Sbjct: 119 ARKPVLGEMI 128
>gi|219854458|ref|YP_002471580.1| hypothetical protein CKR_1115 [Clostridium kluyveri NBRC 12016]
gi|219568182|dbj|BAH06166.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 308
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGTAR 65
+ + P GKTT++R+I R +S + K+V ++D +EIG + +P +G
Sbjct: 144 IIISPPKCGKTTLIRDIVRNISQGIKNVGLTGKKVCVIDERSEIGACFNGMPQLNVGM-- 201
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R + + + + +I A+ + PEVI+ DEIGT + + + GV LI T HG E
Sbjct: 202 RTDILDGCPKSQGIIMAIRSMSPEVIVCDEIGTYKDMDSILTALNSGVNLITTIHGYGTE 261
Query: 126 NIIKNPILSDLI 137
++ P+ +++
Sbjct: 262 DLYSRPVFKEIV 273
>gi|229135016|ref|ZP_04263821.1| Stage III sporulation protein AA [Bacillus cereus BDRD-ST196]
gi|228648401|gb|EEL04431.1| Stage III sporulation protein AA [Bacillus cereus BDRD-ST196]
Length = 308
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP G
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGCVKGIPQYDFGV-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+++IVDEIG + ++ A GV L +AHG +
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYD 255
Query: 126 NIIKNPILSDLI 137
+++K P L ++
Sbjct: 256 DVVKRPSLQAVL 267
>gi|153953843|ref|YP_001394608.1| stage III sporulation protein AA [Clostridium kluyveri DSM 555]
gi|146346724|gb|EDK33260.1| Predicted stage III sporulation protein AA [Clostridium kluyveri
DSM 555]
Length = 305
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGTAR 65
+ + P GKTT++R+I R +S + K+V ++D +EIG + +P +G
Sbjct: 141 IIISPPKCGKTTLIRDIVRNISQGIKNVGLTGKKVCVIDERSEIGACFNGMPQLNVGM-- 198
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R + + + + +I A+ + PEVI+ DEIGT + + + GV LI T HG E
Sbjct: 199 RTDILDGCPKSQGIIMAIRSMSPEVIVCDEIGTYKDMDSILTALNSGVNLITTIHGYGTE 258
Query: 126 NIIKNPILSDLI 137
++ P+ +++
Sbjct: 259 DLYSRPVFKEIV 270
>gi|311069045|ref|YP_003973968.1| stage III sporulation protein AA [Bacillus atrophaeus 1942]
gi|419820311|ref|ZP_14343922.1| stage III sporulation protein AA [Bacillus atrophaeus C89]
gi|310869562|gb|ADP33037.1| stage III sporulation protein AA [Bacillus atrophaeus 1942]
gi|388475463|gb|EIM12175.1| stage III sporulation protein AA [Bacillus atrophaeus C89]
Length = 307
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 69/129 (53%), Gaps = 7/129 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK----RVVIVDTSNEIGGD-GDIPHSAIGTARRM 67
L +G P GKTT++R++AR+ S K + IVD +EI G IP G +R+
Sbjct: 140 LIIGPPQTGKTTLLRDLARLSSSGINKIPAKKTGIVDERSEIAGCLRGIPQHQFG--QRI 197
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
V + + + ++ + + PEVIIVDEIG ++ A GV +I +AHG + ++
Sbjct: 198 DVLDACPKAEGLMMMIRSMSPEVIIVDEIGRMEDSEAILEALHAGVSVIVSAHGWTISDL 257
Query: 128 IKNPILSDL 136
+K P L L
Sbjct: 258 MKRPSLKLL 266
>gi|228992941|ref|ZP_04152865.1| Stage III sporulation protein AA [Bacillus pseudomycoides DSM
12442]
gi|228766798|gb|EEM15437.1| Stage III sporulation protein AA [Bacillus pseudomycoides DSM
12442]
Length = 308
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S + +V IVD +EI G IP G +
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVRSHEIPSCKVGIVDERSEIAGCVKGIPQYEFG--Q 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+V+IVDEIG ++ A GV L +AHG +
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRVEDSEAIMEAVHAGVQLFISAHGFSFD 255
Query: 126 NIIKNPILSDLI 137
+++K P L ++
Sbjct: 256 DVMKRPSLKAVM 267
>gi|229061884|ref|ZP_04199213.1| Stage III sporulation protein AA [Bacillus cereus AH603]
gi|228717397|gb|EEL69066.1| Stage III sporulation protein AA [Bacillus cereus AH603]
Length = 308
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP G
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGCVKGIPQYDFGV-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+++IVDEIG + ++ A GV L +AHG +
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYD 255
Query: 126 NIIKNPILSDLI 137
+++K P L ++
Sbjct: 256 DVVKRPSLQAVL 267
>gi|255280238|ref|ZP_05344793.1| stage III sporulation protein AA [Bryantella formatexigens DSM
14469]
gi|255269329|gb|EET62534.1| stage III sporulation protein AA [Marvinbryantia formatexigens DSM
14469]
Length = 381
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 67/130 (51%), Gaps = 7/130 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK----RVVIVDTSNEIGGDG-DIPHSAIGTARRM 67
L + P GKTT++R++ R +SD V +VD +EIGG +P + +G R
Sbjct: 199 LIISPPRCGKTTLLRDLIRQISDGTASFPGVTVGVVDERSEIGGSYLGVPQNDLGI--RT 256
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
V + + + M+ + P VI VDEIG + A S+ G L+ T HG+ +E++
Sbjct: 257 DVLDCCPKAEGMMMLIRAMSPRVIAVDEIGDYRDIRAIESVIHCGCRLLATVHGDSIEDV 316
Query: 128 IKNPILSDLI 137
+ P+L L+
Sbjct: 317 QRRPLLQKLV 326
>gi|229013411|ref|ZP_04170548.1| Stage III sporulation protein AA [Bacillus mycoides DSM 2048]
gi|423368248|ref|ZP_17345680.1| stage III sporulation protein AA [Bacillus cereus VD142]
gi|423512308|ref|ZP_17488839.1| stage III sporulation protein AA [Bacillus cereus HuA2-1]
gi|423660956|ref|ZP_17636125.1| stage III sporulation protein AA [Bacillus cereus VDM022]
gi|423674015|ref|ZP_17648954.1| stage III sporulation protein AA [Bacillus cereus VDM062]
gi|228747823|gb|EEL97689.1| Stage III sporulation protein AA [Bacillus mycoides DSM 2048]
gi|401080999|gb|EJP89279.1| stage III sporulation protein AA [Bacillus cereus VD142]
gi|401300997|gb|EJS06586.1| stage III sporulation protein AA [Bacillus cereus VDM022]
gi|401309566|gb|EJS14899.1| stage III sporulation protein AA [Bacillus cereus VDM062]
gi|402449279|gb|EJV81116.1| stage III sporulation protein AA [Bacillus cereus HuA2-1]
Length = 308
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP G
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGCVKGIPQYDFGV-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+++IVDEIG + ++ A GV L +AHG +
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYD 255
Query: 126 NIIKNPILSDLI 137
+++K P L ++
Sbjct: 256 DVVKRPSLQAVL 267
>gi|163941952|ref|YP_001646836.1| sporulation stage III protein AA [Bacillus weihenstephanensis
KBAB4]
gi|423518898|ref|ZP_17495379.1| stage III sporulation protein AA [Bacillus cereus HuA2-4]
gi|423669780|ref|ZP_17644809.1| stage III sporulation protein AA [Bacillus cereus VDM034]
gi|163864149|gb|ABY45208.1| Sporulation stage III protein AA [Bacillus weihenstephanensis
KBAB4]
gi|401159953|gb|EJQ67332.1| stage III sporulation protein AA [Bacillus cereus HuA2-4]
gi|401298907|gb|EJS04507.1| stage III sporulation protein AA [Bacillus cereus VDM034]
Length = 308
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP G
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGCVKGIPQYDFGV-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+++IVDEIG + ++ A GV L +AHG +
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYD 255
Query: 126 NIIKNPILSDLI 137
+++K P L ++
Sbjct: 256 DVVKRPSLQAVL 267
>gi|225025911|ref|ZP_03715103.1| hypothetical protein EUBHAL_00147 [Eubacterium hallii DSM 3353]
gi|224956697|gb|EEG37906.1| putative stage III sporulation protein AA [Eubacterium hallii DSM
3353]
Length = 320
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 63/131 (48%), Gaps = 9/131 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGDGDIPHSAIG--TARR 66
L + PG GKTT +R+I R+LSD K V +VD +EIG + IG R
Sbjct: 162 LLISPPGCGKTTYLRDIIRLLSDGTDTITGKNVAVVDERSEIG---NRTREGIGFYLGNR 218
Query: 67 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 126
+ + + M+ + PE++ DEIG E + A + G L+ T HG +++
Sbjct: 219 TDLMDHCPKAAGMLMMLRTMTPEILAADEIGGEKDIKAMAYVRNCGCRLLMTVHGNSMQD 278
Query: 127 IIKNPILSDLI 137
I P+L + +
Sbjct: 279 IFARPVLGEYL 289
>gi|164688622|ref|ZP_02212650.1| hypothetical protein CLOBAR_02267 [Clostridium bartlettii DSM
16795]
gi|164603035|gb|EDQ96500.1| stage III sporulation protein AA [Clostridium bartlettii DSM 16795]
Length = 321
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 69/138 (50%), Gaps = 17/138 (12%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGDGDIPHSAIGTAR- 65
+ + P GKTT++R+I R +S+ ++ +V ++D NEI G S +G A+
Sbjct: 157 IIISPPQCGKTTILRDIVRNISNGNREYGFSGVKVALIDERNEIAG------SCMGVAQL 210
Query: 66 ----RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 121
R V E + ++ + + P VI+ DEIG E E A + GV LI T HG
Sbjct: 211 DVGMRTDVMETCPKDLGIMMVLRSMSPNVIVTDEIGNEKEIKALYTALNGGVSLITTVHG 270
Query: 122 EWLENIIKNPILSDLIGG 139
+ +E+I+ L L+ G
Sbjct: 271 DSIEDILHRTELKRLLDG 288
>gi|308174238|ref|YP_003920943.1| ATP-binding stage III sporulation protein [Bacillus
amyloliquefaciens DSM 7]
gi|384160096|ref|YP_005542169.1| stage III sporulation protein AA [Bacillus amyloliquefaciens TA208]
gi|384165021|ref|YP_005546400.1| ATP-binding stage III sporulation protein [Bacillus
amyloliquefaciens LL3]
gi|384169160|ref|YP_005550538.1| stage III sporulation protein AA [Bacillus amyloliquefaciens XH7]
gi|307607102|emb|CBI43473.1| ATP-binding stage III sporulation protein [Bacillus
amyloliquefaciens DSM 7]
gi|328554184|gb|AEB24676.1| stage III sporulation protein AA [Bacillus amyloliquefaciens TA208]
gi|328912576|gb|AEB64172.1| ATP-binding stage III sporulation protein [Bacillus
amyloliquefaciens LL3]
gi|341828439|gb|AEK89690.1| stage III sporulation protein AA [Bacillus amyloliquefaciens XH7]
Length = 307
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 72/129 (55%), Gaps = 7/129 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGD-GDIPHSAIGTARRM 67
L +G P GKTT++R++AR+ S + K+ I+D +EI G IP + G RR+
Sbjct: 140 LIIGPPQTGKTTLLRDLARLSSTGSKRIPAKKTGIIDERSEIAGCLRGIPQHSFG--RRV 197
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
V + + + ++ + + P+V+IVDEIG ++ A GV +I +AHG ++++
Sbjct: 198 DVLDACPKAEGLMMMIRSMSPDVMIVDEIGRIEDSEALMEALHAGVSVIVSAHGWNMKDL 257
Query: 128 IKNPILSDL 136
+K P L L
Sbjct: 258 VKRPSLKML 266
>gi|228998985|ref|ZP_04158567.1| Stage III sporulation protein AA [Bacillus mycoides Rock3-17]
gi|229006532|ref|ZP_04164170.1| Stage III sporulation protein AA [Bacillus mycoides Rock1-4]
gi|228754718|gb|EEM04125.1| Stage III sporulation protein AA [Bacillus mycoides Rock1-4]
gi|228760602|gb|EEM09566.1| Stage III sporulation protein AA [Bacillus mycoides Rock3-17]
Length = 308
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S + +V IVD +EI G IP G
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVRSHEIPSCKVGIVDERSEIAGCVKGIPQYEFGP-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+V+IVDEIG ++ A GV L +AHG +
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRVEDSEAIMEAVHAGVQLFISAHGFSFD 255
Query: 126 NIIKNPILSDLI 137
+++K P L ++
Sbjct: 256 DVMKRPSLKAVM 267
>gi|229086768|ref|ZP_04218932.1| Stage III sporulation protein AA [Bacillus cereus Rock3-44]
gi|228696543|gb|EEL49364.1| Stage III sporulation protein AA [Bacillus cereus Rock3-44]
Length = 308
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQKR------VVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S R V IVD +EI G IP G
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVYSREIPSCKVGIVDERSEIAGCVKGIPQYEFGP-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+++IVDEIG ++ A GV L +AHG +
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRMEDSEAIMEAVHAGVQLFISAHGFSFD 255
Query: 126 NIIKNPILSDLI 137
+++K P L ++
Sbjct: 256 DVMKRPSLKAVM 267
>gi|89099238|ref|ZP_01172116.1| stage III sporulation protein AA [Bacillus sp. NRRL B-14911]
gi|89086084|gb|EAR65207.1| stage III sporulation protein AA [Bacillus sp. NRRL B-14911]
Length = 356
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQKRVV------IVDTSNEIGGD-GDIPHSAIGTAR 65
+ VG P GKTT++R+IAR++S + IVD +EI G IP G
Sbjct: 187 MVVGPPQTGKTTLLRDIARIVSSGAANPAIAAQKAGIVDERSEIAGSVSGIPQMTFGP-- 244
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+V++VDEIG + + A G+ L+ T HG E
Sbjct: 245 RVDVLDACPKAEGMMMMIRSMSPDVLLVDEIGRQEDGEAIMEAVHAGIKLMMTTHGRSWE 304
Query: 126 NIIKNPILSDLI 137
I P L ++
Sbjct: 305 EIKNRPTLKQIL 316
>gi|408356526|ref|YP_006845057.1| stage III sporulation protein AA [Amphibacillus xylanus NBRC 15112]
gi|407727297|dbj|BAM47295.1| stage III sporulation protein AA [Amphibacillus xylanus NBRC 15112]
Length = 322
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEF----QKRVVIVDTSNEIGGDGD-IPHSAIGTARRM 67
L VG P GKTT++R+I+R++ + K+V IVD +EI G + IP +G +R
Sbjct: 143 LIVGPPQSGKTTLIRDISRLIGTGWGHMEAKKVGIVDERSEIAGSRNGIPFYQVG--KRT 200
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
V + + + M+ + + P++IIVDEIG+ + A + + GV L+ T H + ++I
Sbjct: 201 DVLDNCPKSEGMMLMIRSMSPDIIIVDEIGSVRDIEAIQEVIRSGVGLVCTLHSDSYQSI 260
Query: 128 IKNPILSDLI 137
++ L +I
Sbjct: 261 KQSKHLKPII 270
>gi|225573674|ref|ZP_03782429.1| hypothetical protein RUMHYD_01870 [Blautia hydrogenotrophica DSM
10507]
gi|225038967|gb|EEG49213.1| stage III sporulation protein AA [Blautia hydrogenotrophica DSM
10507]
Length = 311
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 10/138 (7%)
Query: 8 YGKSI---LFVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGD-GDIPHS 59
YGK + L + P GKTT++R++ R +S+ + V +VD +EI G I +
Sbjct: 145 YGKEVAHTLIISPPRCGKTTLLRDLIRQISNGTSSCPGRTVGVVDERSEIAGCYQGIAQN 204
Query: 60 AIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 119
+G R V + + + M+ + + P+V+ VDE+G + HA S+ G L+ T
Sbjct: 205 DVGI--RTDVLDGCPKAEGMMMLIRSMAPQVVAVDELGDYEDIHAIESVVHCGCKLLATV 262
Query: 120 HGEWLENIIKNPILSDLI 137
HG LE++ + P+ L+
Sbjct: 263 HGNSLEDLRRKPLFQRLM 280
>gi|293115588|ref|ZP_05792179.2| stage III sporulation protein AA [Butyrivibrio crossotus DSM 2876]
gi|292808949|gb|EFF68154.1| stage III sporulation protein AA [Butyrivibrio crossotus DSM 2876]
Length = 303
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 7/117 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQKR---VVIVDTSNEIGG-DGDIPHSAIGTARRMQ 68
+ V PG GKTT++R+I R+LSD + R + ++D NEI D IP + +G +
Sbjct: 152 IIVSPPGCGKTTLLRDIIRLLSDGYGNRGFNISVIDERNEISATDLGIPENDVGMRTDVM 211
Query: 69 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
+ + + +I A+ + PE+I VDEIG++ + + G ++ + H + LE
Sbjct: 212 INNKT---EGIIMALRSMAPEIIAVDEIGSDKDINVLNKAITCGCKILASIHADNLE 265
>gi|433542466|ref|ZP_20498893.1| stage III sporulation protein AA [Brevibacillus agri BAB-2500]
gi|432186277|gb|ELK43751.1| stage III sporulation protein AA [Brevibacillus agri BAB-2500]
Length = 258
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 74/140 (52%), Gaps = 9/140 (6%)
Query: 5 LLHYGK--SILFVGRPGVGKTTVMREIARVLS--DEFQ--KRVVIVDTSNEIGGD-GDIP 57
L GK S L + P GKTT++R++AR LS E+ ++V IVD +E+ G +P
Sbjct: 81 LFEGGKVLSTLVISPPQCGKTTLLRDMARSLSYGSEWSSSRKVGIVDERSELAGCLQGVP 140
Query: 58 HSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIG 117
+G R V + + M+ + + P+V+IVDE+G + A GV +I
Sbjct: 141 QRDVGP--RTDVLDACPKAAGMMMLIRSMSPDVLIVDEVGRAEDGDAVWEAIHAGVAVIC 198
Query: 118 TAHGEWLENIIKNPILSDLI 137
+AHG ++ + + P+L +L+
Sbjct: 199 SAHGADIQEVARRPMLGNLV 218
>gi|403386589|ref|ZP_10928646.1| stage III sporulation protein AA [Clostridium sp. JC122]
Length = 251
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ + P GKTT++R+I R++S+ K V ++D +EI IP IG
Sbjct: 84 IIISPPKCGKTTILRDICRIVSNGNYTLNLKGKNVSVIDERSEIAACFKGIPQMNIG--E 141
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + + + +I A+ + PEV+I DEIGT + + + GV LI T HG ++
Sbjct: 142 RTDVLDSCPKSEGIIMAIRSMSPEVVICDEIGTYKDMDSIIAALNSGVKLITTIHGFDID 201
Query: 126 NIIKNPILSDLI 137
++ K P+ +++
Sbjct: 202 DLYKRPVFREVM 213
>gi|398311387|ref|ZP_10514861.1| stage III sporulation protein AA [Bacillus mojavensis RO-H-1]
Length = 307
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 69/131 (52%), Gaps = 7/131 (5%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDEFQK----RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ L +G P GKTT++R++AR+ S + + IVD +EI G IP G +
Sbjct: 138 NTLIIGPPQTGKTTLLRDLARLASSGKNRIAPVKTGIVDERSEIAGCLRGIPQHQFG--Q 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + ++ + + PEVIIVDEIG + A GV +I +AHG +
Sbjct: 196 RIDVLDACPKAEGLMMMIRSMSPEVIIVDEIGRAEDTDALLEALHAGVSVIVSAHGWSIS 255
Query: 126 NIIKNPILSDL 136
+++K P L L
Sbjct: 256 DLMKRPSLKRL 266
>gi|399053816|ref|ZP_10742615.1| stage III sporulation protein AA [Brevibacillus sp. CF112]
gi|398048593|gb|EJL41065.1| stage III sporulation protein AA [Brevibacillus sp. CF112]
Length = 320
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 74/140 (52%), Gaps = 9/140 (6%)
Query: 5 LLHYGK--SILFVGRPGVGKTTVMREIARVLS--DEFQ--KRVVIVDTSNEIGGD-GDIP 57
L GK S L + P GKTT++R++AR LS E+ ++V IVD +E+ G +P
Sbjct: 143 LFEGGKVLSTLVISPPQCGKTTLLRDMARSLSYGSEWSSSRKVGIVDERSELAGCLQGVP 202
Query: 58 HSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIG 117
+G R V + + M+ + + P+V+IVDE+G + A GV +I
Sbjct: 203 QRDVGP--RTDVLDACPKAAGMMMLIRSMSPDVLIVDEVGRAEDGDAVWEAIHAGVAVIC 260
Query: 118 TAHGEWLENIIKNPILSDLI 137
+AHG ++ + + P+L +L+
Sbjct: 261 SAHGADIQEVARRPMLGNLV 280
>gi|358062401|ref|ZP_09149047.1| stage III sporulation protein AA [Clostridium hathewayi WAL-18680]
gi|356699530|gb|EHI61044.1| stage III sporulation protein AA [Clostridium hathewayi WAL-18680]
Length = 320
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 72/144 (50%), Gaps = 10/144 (6%)
Query: 2 VYDLLHYGKSI---LFVGRPGVGKTTVMREIARVLSDEFQKR----VVIVDTSNEIGGD- 53
V L++G I L + P GKTT++R++ R +S+ K V ++D +EIG
Sbjct: 141 VLPYLYHGGDIFHTLVISPPRCGKTTLLRDMIRQISNGTGKEPGMTVGVIDERSEIGACY 200
Query: 54 GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGV 113
+P + +G R + + + + M+ + P VI VDEIG+ + A + G
Sbjct: 201 QGVPQNELGI--RTDILDCCPKARGMMMLIRTMSPRVIAVDEIGSREDLEAMEYVMNCGC 258
Query: 114 MLIGTAHGEWLENIIKNPILSDLI 137
LI T HG +E+I + P+L L+
Sbjct: 259 KLIATVHGNSVEDIKQKPVLRKLV 282
>gi|291536399|emb|CBL09511.1| stage III sporulation protein AA [Roseburia intestinalis M50/1]
Length = 318
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 10/137 (7%)
Query: 5 LLHYGKSI---LFVGRPGVGKTTVMREIARVLSDEFQK----RVVIVDTSNEIGGDG-DI 56
L G+SI L V +PG GKTT +R+ R LS+ + ++ +VD +EI I
Sbjct: 148 FLKDGESIYNTLLVSKPGAGKTTCLRDCIRSLSNGKEGWEGMKICVVDERSEIAACHLGI 207
Query: 57 PHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLI 116
P + +G R V + + M+ + + P++I VDE+G + + A A GV ++
Sbjct: 208 PQNDMGI--RTDVLSGCGKSEGMMLMLRSMSPQIIAVDELGGKKDFQAVEQAACSGVRIL 265
Query: 117 GTAHGEWLENIIKNPIL 133
GT H + +E + + P L
Sbjct: 266 GTVHADTVEELWEKPYL 282
>gi|300854289|ref|YP_003779273.1| stage III sporulation protein AA [Clostridium ljungdahlii DSM
13528]
gi|300434404|gb|ADK14171.1| predicted stage III sporulation protein AA [Clostridium ljungdahlii
DSM 13528]
Length = 308
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGTAR 65
+ + P GKTT++R+I R +S + K+V ++D +EIG + +P +G
Sbjct: 144 IIISPPKCGKTTLVRDIVRNISQGVKNIGLTGKKVSVIDERSEIGACFNGVPQLNVGV-- 201
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R + + + + +I A+ + PEVI+ DEIGT + + + G+ LI T HG +E
Sbjct: 202 RTDILDGCPKSQGIIMAIRSMSPEVIVCDEIGTYRDMDSIVTALNSGISLIITIHGYGIE 261
Query: 126 NIIKNPILSDLI 137
++ P+ +++
Sbjct: 262 DLYNRPVFKEIV 273
>gi|403380881|ref|ZP_10922938.1| stage III sporulation protein AA [Paenibacillus sp. JC66]
Length = 326
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 11/137 (8%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQ--------KRVVIVDTSNEIGGD-GDIPHS 59
G SIL V P GKTT++R++AR +S + ++V I+D +EI +P
Sbjct: 149 GGSILLVSPPQHGKTTMLRDLARSISGGYTCGQIRVPGRKVGIIDERSEIAACVKGVPTF 208
Query: 60 AIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 119
+G R V + + + M+ + + PEV+IVDE+G + +A A G+ ++ TA
Sbjct: 209 DVGP--RTDVLDHCPKAEGMMMMIRSMSPEVLIVDELGRDEDAAAVHEAIHAGIQVLATA 266
Query: 120 HGEWLENIIKNPILSDL 136
H L +I K P L L
Sbjct: 267 HAASLGDIEKRPGLRTL 283
>gi|240145623|ref|ZP_04744224.1| stage III sporulation protein AA [Roseburia intestinalis L1-82]
gi|257202285|gb|EEV00570.1| stage III sporulation protein AA [Roseburia intestinalis L1-82]
Length = 318
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 10/137 (7%)
Query: 5 LLHYGKSI---LFVGRPGVGKTTVMREIARVLSDEFQK----RVVIVDTSNEIGGDG-DI 56
L G+SI L V +PG GKTT +R+ R LS+ + ++ +VD +EI I
Sbjct: 148 FLKDGESIYNTLLVSKPGAGKTTCLRDCIRSLSNGKEGWEGMKICVVDERSEIAACHLGI 207
Query: 57 PHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLI 116
P + +G R V + + M+ + + P++I VDE+G + + A A GV ++
Sbjct: 208 PQNDMGI--RTDVLSGCGKSEGMMLMLRSMSPQIIAVDELGGKKDFQAVEQAACSGVRIL 265
Query: 117 GTAHGEWLENIIKNPIL 133
GT H + +E + + P L
Sbjct: 266 GTVHADTVEELWEKPYL 282
>gi|291538735|emb|CBL11846.1| stage III sporulation protein AA [Roseburia intestinalis XB6B4]
Length = 269
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 10/137 (7%)
Query: 5 LLHYGKSI---LFVGRPGVGKTTVMREIARVLSDEFQK----RVVIVDTSNEIGGDG-DI 56
L G+SI L V +PG GKTT +R+ R LS+ + ++ +VD +EI I
Sbjct: 99 FLKDGESIYNTLLVSKPGAGKTTCLRDCIRSLSNGKEGWEGMKICVVDERSEIAACHLGI 158
Query: 57 PHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLI 116
P + +G R V + + M+ + + P++I VDE+G + + A A GV ++
Sbjct: 159 PQNDMGI--RTDVLSGCGKSEGMMLMLRSMSPQIIAVDELGGKKDFQAVEQAACSGVRIL 216
Query: 117 GTAHGEWLENIIKNPIL 133
GT H + +E + + P L
Sbjct: 217 GTVHADTVEELWEKPYL 233
>gi|225570621|ref|ZP_03779646.1| hypothetical protein CLOHYLEM_06723 [Clostridium hylemonae DSM
15053]
gi|225160634|gb|EEG73253.1| hypothetical protein CLOHYLEM_06723 [Clostridium hylemonae DSM
15053]
Length = 316
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 15/134 (11%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGDGDIPHSAIGTAR--- 65
L + P GKTT++R++ R +SD V +VD +EIGG +G A+
Sbjct: 148 LIISPPRCGKTTLLRDMIRQISDGNAWVKGMSVGVVDERSEIGG------CYMGVAQNHL 201
Query: 66 --RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 123
R V + + + MI + + PEV+ VDEIG + HA G L+ + HG
Sbjct: 202 GMRTDVLDCCPKAEGMIMLIRSMSPEVVAVDEIGAAEDVHAVEYAMHCGCKLLASIHGAS 261
Query: 124 LENIIKNPILSDLI 137
+E I K P+L L+
Sbjct: 262 MEEIRKKPLLGRLV 275
>gi|403070093|ref|ZP_10911425.1| stage III sporulation protein AA [Oceanobacillus sp. Ndiop]
Length = 325
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 67/130 (51%), Gaps = 7/130 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK----RVVIVDTSNEIGGD-GDIPHSAIGTARRM 67
L VG P GKTT++R++ R+++ + K +V ++D +EIG +P +G R
Sbjct: 141 LIVGPPQTGKTTLIRDLTRLIASGYGKISPRKVGVIDERSEIGASLKGVPQHNLGL--RT 198
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
V + + M+ + + P+V++VDEIG+ + A GV ++ + HG L+ +
Sbjct: 199 DVLDACPKSDGMMMMIRSMSPDVLVVDEIGSGEDIAALMEAINAGVTIVCSIHGNDLKEL 258
Query: 128 IKNPILSDLI 137
K P L L
Sbjct: 259 KKRPSLQQLF 268
>gi|52080976|ref|YP_079767.1| hypothetical protein BL01540 [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|319645066|ref|ZP_07999299.1| SpoIIIAA protein [Bacillus sp. BT1B_CT2]
gi|423682948|ref|ZP_17657787.1| hypothetical protein MUY_02800 [Bacillus licheniformis WX-02]
gi|52004187|gb|AAU24129.1| SpoIIIAA [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|317392875|gb|EFV73669.1| SpoIIIAA protein [Bacillus sp. BT1B_CT2]
gi|383439722|gb|EID47497.1| hypothetical protein MUY_02800 [Bacillus licheniformis WX-02]
Length = 307
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 69/131 (52%), Gaps = 7/131 (5%)
Query: 11 SILFVGRPGVGKTTVMREIARVLS----DEFQKRVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ L +G P GKTT++R++AR++S + K+V IVD +EI G IP +G
Sbjct: 138 NTLIIGPPQTGKTTLLRDLARLISSGSGNAPAKKVGIVDERSEIAGCVNGIPQYRLGD-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R + + + + ++ + + PEV+I DEIG +A A GV +I +AHG
Sbjct: 196 RADILDACPKAEGLMMMIRSMSPEVMIADEIGRMEDAEALLEAVHAGVTVIVSAHGYTYA 255
Query: 126 NIIKNPILSDL 136
++ + P L L
Sbjct: 256 DLARRPSLKML 266
>gi|404489858|ref|YP_006713964.1| stage III sporulation protein SpoIIIAA [Bacillus licheniformis DSM
13 = ATCC 14580]
gi|52348854|gb|AAU41488.1| stage III sporulation protein SpoIIIAA [Bacillus licheniformis DSM
13 = ATCC 14580]
Length = 309
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 68/129 (52%), Gaps = 7/129 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLS----DEFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRM 67
L +G P GKTT++R++AR++S + K+V IVD +EI G IP +G R
Sbjct: 142 LIIGPPQTGKTTLLRDLARLISSGSGNAPAKKVGIVDERSEIAGCVNGIPQYRLGD--RA 199
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
+ + + + ++ + + PEV+I DEIG +A A GV +I +AHG ++
Sbjct: 200 DILDACPKAEGLMMMIRSMSPEVMIADEIGRMEDAEALLEAVHAGVTVIVSAHGYTYADL 259
Query: 128 IKNPILSDL 136
+ P L L
Sbjct: 260 ARRPSLKML 268
>gi|160938291|ref|ZP_02085646.1| hypothetical protein CLOBOL_03187 [Clostridium bolteae ATCC
BAA-613]
gi|158438664|gb|EDP16421.1| hypothetical protein CLOBOL_03187 [Clostridium bolteae ATCC
BAA-613]
Length = 357
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 13/138 (9%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDEFQKR----------VVIVDTSNEIGGD-GDIPHS 59
+ L + P GKTT++R++ R +SD + + V +VD +E+G +P +
Sbjct: 177 NTLVISPPRCGKTTLLRDMIRQVSDGPRTQRSGRRITGVSVGVVDERSELGACYQGVPQN 236
Query: 60 AIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 119
+G R V + + + M+ V + P+VI VDEIG+ + A + G L T
Sbjct: 237 DLGM--RTDVLDCCPKSQGMMMLVRSMAPQVIAVDEIGSREDVQAIEYVRNCGCSLAATI 294
Query: 120 HGEWLENIIKNPILSDLI 137
HG LE+I++ P + +LI
Sbjct: 295 HGSSLEDIMQKPAVGELI 312
>gi|317128413|ref|YP_004094695.1| stage III sporulation protein AA [Bacillus cellulosilyticus DSM
2522]
gi|315473361|gb|ADU29964.1| stage III sporulation protein AA [Bacillus cellulosilyticus DSM
2522]
Length = 310
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQKR------VVIVDTSNEIGGD-GDIPHSAIGTAR 65
L +G P GKTT++R++AR +S + R V I+D +EI G +P G
Sbjct: 146 LIIGPPKSGKTTLLRDLAREISIGSKSRKIEPKNVGIIDERSEIAGSVKGVPQHDFGV-- 203
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
++ + + + + ++ + + PEV+IVDEIG + + A GV + + HGE L
Sbjct: 204 KIDILDACPKAEGLMMMIRSMSPEVLIVDEIGRKEDCEAIMEAVHAGVTIFASVHGENLN 263
Query: 126 NIIKNPILSDLI 137
++ P ++ LI
Sbjct: 264 DVKSRPTIARLI 275
>gi|302874798|ref|YP_003843431.1| stage III sporulation protein AA [Clostridium cellulovorans 743B]
gi|307690585|ref|ZP_07633031.1| stage III sporulation protein AA [Clostridium cellulovorans 743B]
gi|302577655|gb|ADL51667.1| stage III sporulation protein AA [Clostridium cellulovorans 743B]
Length = 307
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDG-DIPHSAIGTAR 65
+ + P GKTT++R+I R LSD +RV ++D +EI +P +G
Sbjct: 140 IIISPPKCGKTTMLRDITRQLSDGIADNNVSGRRVCVIDERSEIAACKLGVPEMDVGL-- 197
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + + ++ A+ P++I+ DEIGTE + ++ S GV +I T HG+ +E
Sbjct: 198 RTDVLDGCPKAIGIMMAIRTLAPDIIVCDEIGTEKDLNSIISACTCGVNIISTIHGQSIE 257
Query: 126 NIIKNPILSDL 136
++ I D+
Sbjct: 258 DLYSKGISRDI 268
>gi|399889154|ref|ZP_10775031.1| stage III sporulation protein AA [Clostridium arbusti SL206]
Length = 306
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGTAR 65
+ + P GKTT++R+I R +S+ K V ++D +EI D IP +G
Sbjct: 142 IIISPPKCGKTTLIRDITRNISNGMDNTLLKGKNVCVIDERSEICASSDGIPQLNVGI-- 199
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + + + ++ A+ + P+VI+ DEIGT + + + GV LI T HG +E
Sbjct: 200 RTDVMDNCPKSQGIMMAIRSMAPDVIVCDEIGTYDDVKSILAALNCGVNLITTIHGFGIE 259
Query: 126 NIIKNPILSDLI 137
++ + D+I
Sbjct: 260 DLNSRDVFKDVI 271
>gi|336421575|ref|ZP_08601732.1| stage III sporulation protein AA [Lachnospiraceae bacterium
5_1_57FAA]
gi|336000459|gb|EGN30609.1| stage III sporulation protein AA [Lachnospiraceae bacterium
5_1_57FAA]
Length = 312
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 18/148 (12%)
Query: 2 VYDLLHYGKSI---LFVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGDG 54
V+ + Y +S+ L + P GKTT++R++ R +SD V +VD +EIGG
Sbjct: 134 VFPYITYNRSLYHTLVISPPRCGKTTLLRDMIRQISDGNDWVRGMAVGVVDERSEIGG-- 191
Query: 55 DIPHSAIGTAR-----RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIA 109
+G A+ R V + + + MI + + PEVI VDEIG+ + HA
Sbjct: 192 ----CYMGVAQNHLGIRTDVLDGCPKAEGMIMLIRSMGPEVIAVDEIGSAEDVHAIEYAM 247
Query: 110 ERGVMLIGTAHGEWLENIIKNPILSDLI 137
G ++ T H +E + K P+L +I
Sbjct: 248 HCGCKMLATVHAGSMEELRKKPLLDQMI 275
>gi|160934305|ref|ZP_02081692.1| hypothetical protein CLOLEP_03176 [Clostridium leptum DSM 753]
gi|156866978|gb|EDO60350.1| putative stage III sporulation protein AA [Clostridium leptum DSM
753]
Length = 336
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 64/121 (52%), Gaps = 5/121 (4%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQ 68
+L G P GKTT++R++AR LS + K+VV++D E+GG I + +G +
Sbjct: 161 SGLLIAGPPSSGKTTILRDLARQLSIK-GKKVVVIDERGELGGAFQGICQNDLGLS---D 216
Query: 69 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 128
V + + +++AV PE+II DE G+ EA A GV LI T H LE I
Sbjct: 217 VLTGFPKGEGILQAVRCLSPELIICDEAGSRQEAAAIEEGLNAGVGLITTLHAGSLEEIY 276
Query: 129 K 129
+
Sbjct: 277 R 277
>gi|452975004|gb|EME74823.1| stage III sporulation protein AA [Bacillus sonorensis L12]
Length = 307
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEF----QKRVVIVDTSNEIGGD-GDIPHSAIGTARRM 67
L +G P GKTT++R++ R++S K+ IVD +EI G IP G R+
Sbjct: 140 LIIGPPQTGKTTLLRDLGRLISTGSGKIPAKKAAIVDERSEIAGCVNGIPQYKFGN--RI 197
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
+ + + + ++ + + PEV+I DEIG +A A GV +I +AHG ++
Sbjct: 198 DILDACPKAEGLMMMIRSMSPEVVIADEIGRMEDAEALLEAVHAGVSVIVSAHGFTYSDV 257
Query: 128 IKNPILSDL 136
K P L L
Sbjct: 258 SKRPSLKLL 266
>gi|125973363|ref|YP_001037273.1| stage III sporulation protein spoIIIAA [Clostridium thermocellum
ATCC 27405]
gi|256005469|ref|ZP_05430432.1| stage III sporulation protein AA [Clostridium thermocellum DSM
2360]
gi|281417563|ref|ZP_06248583.1| stage III sporulation protein AA [Clostridium thermocellum JW20]
gi|385778725|ref|YP_005687890.1| stage III sporulation protein AA [Clostridium thermocellum DSM
1313]
gi|419722089|ref|ZP_14249238.1| stage III sporulation protein AA [Clostridium thermocellum AD2]
gi|419724836|ref|ZP_14251893.1| stage III sporulation protein AA [Clostridium thermocellum YS]
gi|125713588|gb|ABN52080.1| stage III sporulation protein AA [Clostridium thermocellum ATCC
27405]
gi|255990609|gb|EEU00728.1| stage III sporulation protein AA [Clostridium thermocellum DSM
2360]
gi|281408965|gb|EFB39223.1| stage III sporulation protein AA [Clostridium thermocellum JW20]
gi|316940405|gb|ADU74439.1| stage III sporulation protein AA [Clostridium thermocellum DSM
1313]
gi|380771725|gb|EIC05588.1| stage III sporulation protein AA [Clostridium thermocellum YS]
gi|380781843|gb|EIC11492.1| stage III sporulation protein AA [Clostridium thermocellum AD2]
Length = 336
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
L V P GKTT++R+I R +SD ++ +V +VD +EI +P + +GT
Sbjct: 171 LIVSPPQCGKTTLLRDITRAISDGVEEMGFKGVKVGVVDERSEIAACYKGVPQNRVGT-- 228
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 121
R V + + MI + + P+VI+ DEIG + + A + GV +I TAHG
Sbjct: 229 RTDVLDACPKQIGMIMMLRSMSPDVIVTDEIGNKGDKDALIQVLNAGVKVISTAHG 284
>gi|357051938|ref|ZP_09113056.1| stage III sporulation protein AA [Clostridium clostridioforme
2_1_49FAA]
gi|355387206|gb|EHG34232.1| stage III sporulation protein AA [Clostridium clostridioforme
2_1_49FAA]
Length = 357
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 13/138 (9%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDEFQKR----------VVIVDTSNEIGGD-GDIPHS 59
+ L + P GKTT++R+I R +SD + + V +VD +E+G +P +
Sbjct: 177 NTLVISPPRCGKTTLLRDIIRQVSDGPRTQRAGRRIPGVSVGVVDERSELGACYQGVPQN 236
Query: 60 AIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 119
+G R + + + + M+ V + P+VI VDEIG+ + A + G L T
Sbjct: 237 DLGM--RTDILDCCPKSQGMMMLVRSMAPQVIAVDEIGSREDVRAIEYVRNCGCSLAATI 294
Query: 120 HGEWLENIIKNPILSDLI 137
HG LE+I++ P + +LI
Sbjct: 295 HGSSLEDIMQKPAVGELI 312
>gi|226311909|ref|YP_002771803.1| stage III sporulation protein AA [Brevibacillus brevis NBRC 100599]
gi|226094857|dbj|BAH43299.1| stage III sporulation protein AA [Brevibacillus brevis NBRC 100599]
Length = 320
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 7/133 (5%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLS----DEFQKRVVIVDTSNEIGGD-GDIPHSAIGTA 64
++ L + P GKTT++R+IAR +S ++V IVD +E+ G +P +G
Sbjct: 150 QNTLLISPPQCGKTTLLRDIARTISYGSECSSSRKVGIVDERSELAGCLQGVPQRDVGP- 208
Query: 65 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 124
R V + + M+ + + P+V+IVDE+G + A GV +I +AHG +
Sbjct: 209 -RTDVLDACPKAVGMMMLIRSMSPDVLIVDEVGRAEDGDAVWEAIHAGVAVICSAHGASV 267
Query: 125 ENIIKNPILSDLI 137
+ + + P+L LI
Sbjct: 268 KEVAERPMLGKLI 280
>gi|386759038|ref|YP_006232254.1| ATP-binding stage III sporulation protein [Bacillus sp. JS]
gi|384932320|gb|AFI28998.1| ATP-binding stage III sporulation protein [Bacillus sp. JS]
Length = 307
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 70/130 (53%), Gaps = 9/130 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQKRVV-----IVDTSNEIGGD-GDIPHSAIGTARR 66
L +G P GKTT++R++AR LS + R++ IVD +EI G IP G +R
Sbjct: 140 LIIGPPQTGKTTLLRDLAR-LSSTGKNRMLPVKTGIVDERSEIAGCLRGIPQHQFG--QR 196
Query: 67 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 126
+ V + + + ++ + + PEV+IVDEIG + A GV +I +AHG + +
Sbjct: 197 IDVLDACPKAEGLMMMIRSMSPEVMIVDEIGRMEDTDALLEALHAGVSVIVSAHGWSISD 256
Query: 127 IIKNPILSDL 136
++K P L L
Sbjct: 257 LMKRPSLKRL 266
>gi|255100207|ref|ZP_05329184.1| stage III sporulation protein AA [Clostridium difficile QCD-63q42]
Length = 322
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGDG-DIPHSAIGTAR 65
L + P GKTT++R+I R LS+ + +V +VD NEI G +P +G
Sbjct: 158 LIISPPQCGKTTLIRDIVRNLSNGNEDYGFKGLKVALVDERNEIAGSYLGVPQMDVGI-- 215
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R + E + + + + P VI+ DEIG+E E A + G+ LI T HG+ +E
Sbjct: 216 RTDIIETCPKDLGITMLLRSMSPNVIVTDEIGSEKEIKALYTALNGGIGLITTVHGDSIE 275
Query: 126 NI 127
+I
Sbjct: 276 DI 277
>gi|225388160|ref|ZP_03757884.1| hypothetical protein CLOSTASPAR_01895 [Clostridium asparagiforme
DSM 15981]
gi|225045777|gb|EEG56023.1| hypothetical protein CLOSTASPAR_01895 [Clostridium asparagiforme
DSM 15981]
Length = 363
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 7/132 (5%)
Query: 11 SILFVGRPGVGKTTVMREIARVLS--DEFQK--RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ L + P GKTT++R++ R +S + F V +VD +E+G +P + +G
Sbjct: 173 NTLIISPPRCGKTTLLRDVIRQVSAGNAFAPGMTVGVVDERSELGACYQGVPQNDLGP-- 230
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + + + M+ V + P+V+ VDEIG+ + A I G L T HG LE
Sbjct: 231 RTDVLDCCPKDQGMMMLVRSMAPQVVAVDEIGSAGDVEAVGYIQSCGCALAATVHGASLE 290
Query: 126 NIIKNPILSDLI 137
+I P L L+
Sbjct: 291 DIYSKPALGQLV 302
>gi|350266640|ref|YP_004877947.1| stage III sporulation protein AA [Bacillus subtilis subsp.
spizizenii TU-B-10]
gi|349599527|gb|AEP87315.1| stage III sporulation protein AA [Bacillus subtilis subsp.
spizizenii TU-B-10]
Length = 307
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 67/129 (51%), Gaps = 7/129 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDE----FQKRVVIVDTSNEIGGD-GDIPHSAIGTARRM 67
L +G P GKTT++R++AR+ S + IVD +EI G IP G +R+
Sbjct: 140 LIIGPPQTGKTTLLRDLARLSSTGKNHMLPVKTGIVDERSEIAGCLRGIPQHQFG--QRI 197
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
V + + + ++ + + PEVIIVDEIG + A GV +I +AHG L ++
Sbjct: 198 DVLDACPKAEGLMMMIRSMSPEVIIVDEIGRIEDTDALLEALHAGVSVIVSAHGWSLSDL 257
Query: 128 IKNPILSDL 136
+K P L L
Sbjct: 258 MKRPSLKRL 266
>gi|302387582|ref|YP_003823404.1| stage III sporulation protein AA [Clostridium saccharolyticum WM1]
gi|302198210|gb|ADL05781.1| stage III sporulation protein AA [Clostridium saccharolyticum WM1]
Length = 335
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 7/130 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLS----DEFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRM 67
L + P GKTT++R++ R +S D V +VD +EIG +P + +G R
Sbjct: 156 LIISPPRCGKTTLLRDMIRQVSNGTEDHTGLTVGVVDERSEIGACYQGVPQNELGI--RT 213
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
+ + + K M+ + P VI VDEIG+ + A + G LI T HG ++++
Sbjct: 214 DILDCCPKAKGMMMLIRTMSPRVIAVDEIGSREDLEAMEYVMNCGCKLIATVHGNSIDDL 273
Query: 128 IKNPILSDLI 137
+ P+L L+
Sbjct: 274 KQKPVLRKLV 283
>gi|159488481|ref|XP_001702238.1| hypothetical protein CHLREDRAFT_154234 [Chlamydomonas reinhardtii]
gi|158271275|gb|EDO97098.1| predicted protein [Chlamydomonas reinhardtii]
Length = 205
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 101 EAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTL-GDEEARARRCQKSI 159
EA A RSI++RGVML+ TAHG L +I+ NP L+ L+GG+ TV L A K+
Sbjct: 2 EAEAARSISQRGVMLVATAHGTDLRSIMGNPDLNSLVGGMQTVILGDAAAGAAHGGAKTR 61
Query: 160 LERKAPPTFYFLIEMRERHYWVTHKTEKSVDMLLRG 195
ER+ PTF + SVD LL G
Sbjct: 62 TERRGEPTFRLRLR---------PDVAASVDALLGG 88
>gi|167747013|ref|ZP_02419140.1| hypothetical protein ANACAC_01725 [Anaerostipes caccae DSM 14662]
gi|167653973|gb|EDR98102.1| stage III sporulation protein AA [Anaerostipes caccae DSM 14662]
Length = 310
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 68/127 (53%), Gaps = 4/127 (3%)
Query: 12 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 70
+L + PG GKTT++R++ R+ SD + V +VD +EI +P + +G R V
Sbjct: 154 VLIISPPGRGKTTLLRDMIRIASDGGET-VGVVDERSEIAASYMGVPQNKVGI--RTDVM 210
Query: 71 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 130
+ + + M+ V + P VI VDEIG + + A A G L+ T HG+ +E + K
Sbjct: 211 DGCPKSEGMMMLVRSMAPNVIAVDEIGKKEDVDAMLYSAYCGCTLMATIHGKDMEELKKV 270
Query: 131 PILSDLI 137
P + +++
Sbjct: 271 PYVGEMM 277
>gi|428279930|ref|YP_005561665.1| stage III sporulation protein AA [Bacillus subtilis subsp. natto
BEST195]
gi|291484887|dbj|BAI85962.1| stage III sporulation protein AA [Bacillus subtilis subsp. natto
BEST195]
Length = 307
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 9/132 (6%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDEFQKRVV-----IVDTSNEIGGD-GDIPHSAIGTA 64
+ L +G P GKTT++R++AR LS +K ++ IVD +EI G IP G
Sbjct: 138 NTLIIGPPQTGKTTLLRDLAR-LSSTGKKNMLPVKTGIVDERSEIAGCLRGIPQHQFG-- 194
Query: 65 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 124
+R+ V + + + ++ + + PEV+IVDEIG + A GV +I +AHG +
Sbjct: 195 QRIDVLDACPKAEGLMMMIRSMSPEVMIVDEIGRMEDTDALLEALHAGVSVIVSAHGWSI 254
Query: 125 ENIIKNPILSDL 136
+++K P L L
Sbjct: 255 SDLMKRPSLKRL 266
>gi|407959688|dbj|BAM52928.1| ATP-binding stage III sporulation protein [Bacillus subtilis
BEST7613]
gi|407965263|dbj|BAM58502.1| ATP-binding stage III sporulation protein [Bacillus subtilis
BEST7003]
Length = 307
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 70/130 (53%), Gaps = 9/130 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQKRVV-----IVDTSNEIGGD-GDIPHSAIGTARR 66
L +G P GKTT++R++AR LS +K ++ IVD +EI G IP G +R
Sbjct: 140 LIIGPPQTGKTTLLRDLAR-LSSTGKKNMLPVKTGIVDERSEIAGCLRGIPQHQFG--QR 196
Query: 67 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 126
+ V + + + ++ + + PEV+IVDEIG + A GV +I +AHG + +
Sbjct: 197 IDVLDACPKAEGLMMMIRSMSPEVMIVDEIGRMEDTDALLEALHAGVSVIVSAHGWSISD 256
Query: 127 IIKNPILSDL 136
++K P L L
Sbjct: 257 LMKRPSLKRL 266
>gi|288870190|ref|ZP_06113246.2| stage III sporulation protein AA [Clostridium hathewayi DSM 13479]
gi|288868079|gb|EFD00378.1| stage III sporulation protein AA [Clostridium hathewayi DSM 13479]
Length = 356
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 7/130 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQKR----VVIVDTSNEIGGDGD-IPHSAIGTARRM 67
L + P GKTT++R++ R +S+ + V +VD +EIG IP + +G R
Sbjct: 177 LIISPPRCGKTTLLRDLIRQISNGTEAHPGMTVGVVDERSEIGACYQGIPQNELGI--RT 234
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
+ + + + M+ + P VI VDEIG+ + A + G LI T HG ++++
Sbjct: 235 DILDCCPKARGMMMLIRTMSPRVIAVDEIGSREDLEAVEYVMNCGCKLIATVHGSSIDDL 294
Query: 128 IKNPILSDLI 137
+ P+L L+
Sbjct: 295 KQKPVLRRLV 304
>gi|169335050|ref|ZP_02862243.1| hypothetical protein ANASTE_01456 [Anaerofustis stercorihominis DSM
17244]
gi|169257788|gb|EDS71754.1| stage III sporulation protein AA [Anaerofustis stercorihominis DSM
17244]
Length = 304
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 63/121 (52%), Gaps = 5/121 (4%)
Query: 13 LFVGRPGVGKTTVMREIARVLS----DEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 68
L + P VGKTT++R+I+RV+S D KRV IVD EI D + + +
Sbjct: 145 LIISPPKVGKTTLLRDISRVISTNKGDFVGKRVCIVDERKEIASLHD-GVNELNIGDKTD 203
Query: 69 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 128
V E + M V PEVII DEIG + A + GV +I +AHG+ +++I+
Sbjct: 204 VLEGINKSDGMNMLVRAMSPEVIITDEIGKIDDISALENSVLSGVKVISSAHGKDMKDIL 263
Query: 129 K 129
+
Sbjct: 264 R 264
>gi|16079499|ref|NP_390323.1| ATP-binding stage III sporulation protein [Bacillus subtilis subsp.
subtilis str. 168]
gi|221310366|ref|ZP_03592213.1| mutants block sporulation after engulfment (stage III sporulation)
[Bacillus subtilis subsp. subtilis str. 168]
gi|221314690|ref|ZP_03596495.1| mutants block sporulation after engulfment (stage III sporulation)
[Bacillus subtilis subsp. subtilis str. NCIB 3610]
gi|221319613|ref|ZP_03600907.1| mutants block sporulation after engulfment (stage III sporulation)
[Bacillus subtilis subsp. subtilis str. JH642]
gi|221323889|ref|ZP_03605183.1| mutants block sporulation after engulfment (stage III sporulation)
[Bacillus subtilis subsp. subtilis str. SMY]
gi|418032384|ref|ZP_12670867.1| mutants block sporulation after engulfment (stage III sporulation)
[Bacillus subtilis subsp. subtilis str. SC-8]
gi|449094940|ref|YP_007427431.1| ATP-binding stage III sporulation protein [Bacillus subtilis XF-1]
gi|452915262|ref|ZP_21963888.1| stage III sporulation protein AA [Bacillus subtilis MB73/2]
gi|730774|sp|Q01367.1|SP3AA_BACSU RecName: Full=Stage III sporulation protein AA
gi|581722|emb|CAA43959.1| SpoIIIAA protein [Bacillus subtilis subsp. subtilis str. 168]
gi|1000359|gb|AAA76720.1| SpoIIIAA [Bacillus subtilis subsp. subtilis str. JH642]
gi|1303904|dbj|BAA12560.1| SpoIIIAA [Bacillus subtilis]
gi|2634877|emb|CAB14374.1| ATP-binding stage III sporulation protein [Bacillus subtilis subsp.
subtilis str. 168]
gi|351471247|gb|EHA31368.1| mutants block sporulation after engulfment (stage III sporulation)
[Bacillus subtilis subsp. subtilis str. SC-8]
gi|449028855|gb|AGE64094.1| ATP-binding stage III sporulation protein [Bacillus subtilis XF-1]
gi|452115610|gb|EME06006.1| stage III sporulation protein AA [Bacillus subtilis MB73/2]
Length = 307
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 9/132 (6%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDEFQKRVV-----IVDTSNEIGGD-GDIPHSAIGTA 64
+ L +G P GKTT++R++AR LS +K ++ IVD +EI G IP G
Sbjct: 138 NTLIIGPPQTGKTTLLRDLAR-LSSTGKKNMLPVKTGIVDERSEIAGCLRGIPQHQFG-- 194
Query: 65 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 124
+R+ V + + + ++ + + PEV+IVDEIG + A GV +I +AHG +
Sbjct: 195 QRIDVLDACPKAEGLMMMIRSMSPEVMIVDEIGRMEDTDALLEALHAGVSVIVSAHGWSI 254
Query: 125 ENIIKNPILSDL 136
+++K P L L
Sbjct: 255 SDLMKRPSLKRL 266
>gi|402776705|ref|YP_006630649.1| ATP-binding stage III sporulation protein [Bacillus subtilis QB928]
gi|402481885|gb|AFQ58394.1| ATP-binding stage III sporulation protein [Bacillus subtilis QB928]
Length = 308
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 70/130 (53%), Gaps = 9/130 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQKRVV-----IVDTSNEIGGD-GDIPHSAIGTARR 66
L +G P GKTT++R++AR LS +K ++ IVD +EI G IP G +R
Sbjct: 141 LIIGPPQTGKTTLLRDLAR-LSSTGKKNMLPVKTGIVDERSEIAGCLRGIPQHQFG--QR 197
Query: 67 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 126
+ V + + + ++ + + PEV+IVDEIG + A GV +I +AHG + +
Sbjct: 198 IDVLDACPKAEGLMMMIRSMSPEVMIVDEIGRMEDTDALLEALHAGVSVIVSAHGWSISD 257
Query: 127 IIKNPILSDL 136
++K P L L
Sbjct: 258 LMKRPSLKRL 267
>gi|317056392|ref|YP_004104859.1| AAA ATPase [Ruminococcus albus 7]
gi|315448661|gb|ADU22225.1| AAA ATPase [Ruminococcus albus 7]
Length = 298
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 5/129 (3%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQ 68
+S+L G P GKTT +R++ R+ + R ++D EI G IP + IG +
Sbjct: 145 RSLLIAGSPSSGKTTFLRDLTRLCGHRY--RTSLIDERGEIAASVGGIPANDIGIMTDVF 202
Query: 69 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 128
P + + + AV P+VI+ DEIG+ + + + G LI + H L ++I
Sbjct: 203 DRYP--RKEAVQTAVRVMSPQVIVCDEIGSAEDITSLEYAVDSGAELIASCHCSGLSDLI 260
Query: 129 KNPILSDLI 137
P +S L+
Sbjct: 261 HKPNISKLV 269
>gi|384176064|ref|YP_005557449.1| stage III sporulation protein AA [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
gi|349595288|gb|AEP91475.1| stage III sporulation protein AA [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
Length = 307
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 70/130 (53%), Gaps = 9/130 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQKRVV-----IVDTSNEIGGD-GDIPHSAIGTARR 66
L +G P GKTT++R++AR LS +K ++ IVD +EI G IP G +R
Sbjct: 140 LIIGPPQTGKTTLLRDLAR-LSSTGKKSMLPVKTGIVDERSEIAGCLRGIPQHQFG--QR 196
Query: 67 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 126
+ V + + + ++ + + PEV+IVDEIG + A GV +I +AHG + +
Sbjct: 197 IDVLDACPKAEGLMMMIRSMSPEVMIVDEIGRMEDTDALLEALHAGVSVIVSAHGWSISD 256
Query: 127 IIKNPILSDL 136
++K P L L
Sbjct: 257 LMKRPSLKRL 266
>gi|403744996|ref|ZP_10954024.1| stage III sporulation protein AA [Alicyclobacillus hesperidum
URH17-3-68]
gi|403121651|gb|EJY55928.1| stage III sporulation protein AA [Alicyclobacillus hesperidum
URH17-3-68]
Length = 347
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 11/135 (8%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDEFQKR------VVIVDTSNEIGG--DGDIPHSAIG 62
S L + P GKTT++R+IAR S+ R VVI+D +EI G +G P A+G
Sbjct: 184 STLVISPPQCGKTTLVRDIARQWSENLVTRRRSPSKVVIIDERSEIAGMFEGR-PQFALG 242
Query: 63 TARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 122
R V + + + ++ A+ + P++++ DEIG + A A GV +I TAH
Sbjct: 243 P--RTDVLDGCPKAEGLLMAIRSLSPDIVVTDEIGKHGDVEAILEAANAGVAVITTAHAS 300
Query: 123 WLENIIKNPILSDLI 137
L + + P + +L
Sbjct: 301 SLASWRRRPHMEELF 315
>gi|398817112|ref|ZP_10575743.1| stage III sporulation protein AA [Brevibacillus sp. BC25]
gi|398030914|gb|EJL24313.1| stage III sporulation protein AA [Brevibacillus sp. BC25]
Length = 320
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 69/130 (53%), Gaps = 7/130 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLS--DEFQ--KRVVIVDTSNEIGGD-GDIPHSAIGTARRM 67
L + P GKTT++R++AR +S E+ ++V IVD +E+ G +P +G R
Sbjct: 153 LLISPPQCGKTTLLRDMARTISYGSEWSSSRKVGIVDERSELAGCLQGVPQRDVGP--RT 210
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
V + + M+ + + P+V+IVDE+G + A GV +I +AHG ++ +
Sbjct: 211 DVLDACPKAAGMMMMIRSMSPDVLIVDEVGRTEDGDAVWEAIHAGVAVICSAHGASVKEV 270
Query: 128 IKNPILSDLI 137
+ P+L LI
Sbjct: 271 AERPMLGKLI 280
>gi|126698788|ref|YP_001087685.1| stage III sporulation protein AA [Clostridium difficile 630]
gi|255306096|ref|ZP_05350268.1| stage III sporulation protein AA [Clostridium difficile ATCC 43255]
gi|423090770|ref|ZP_17079056.1| stage III sporulation protein AA [Clostridium difficile
70-100-2010]
gi|115250225|emb|CAJ68046.1| Stage III sporulation protein AA [Clostridium difficile 630]
gi|357555885|gb|EHJ37507.1| stage III sporulation protein AA [Clostridium difficile
70-100-2010]
Length = 322
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGDG-DIPHSAIGTAR 65
L + P GKTT++R+I R LS+ + +V +VD NEI G +P +G
Sbjct: 158 LIISPPQCGKTTLIRDIVRNLSNGNEDYGFKGLKVALVDERNEIAGAYLGVPQMDVGI-- 215
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R + E + + + + P VI+ DEIG+E E A + G+ LI T HG+ +E
Sbjct: 216 RTDIIETCPKDLGITMLLRSMSPNVIVTDEIGSEKEIKALYTALNGGIGLITTVHGDSIE 275
Query: 126 NI 127
+I
Sbjct: 276 DI 277
>gi|239827682|ref|YP_002950306.1| stage III sporulation protein AA [Geobacillus sp. WCH70]
gi|239807975|gb|ACS25040.1| stage III sporulation protein AA [Geobacillus sp. WCH70]
Length = 308
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R+ AR++S ++V IVD +EI G IP +G
Sbjct: 140 MIIGSPQTGKTTLLRDAARMISMGINEKHIPSQKVGIVDERSEIAGCVKGIPQFELGN-- 197
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+V+IVDEIG ++ A GV + T HG +
Sbjct: 198 RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRAEDSEAILEAVNAGVCIWTTVHGRKWK 257
Query: 126 NIIKNPILSDLI 137
++ + P L +I
Sbjct: 258 DVFQRPTLRPII 269
>gi|417961837|ref|ZP_12604170.1| Stage III sporulation protein AA, partial [Candidatus Arthromitus
sp. SFB-2]
gi|380332103|gb|EIA23008.1| Stage III sporulation protein AA, partial [Candidatus Arthromitus
sp. SFB-2]
Length = 186
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK-----RVVIVDTSNEIGGDG-DIPHSAIGTARR 66
L + P GKTT++R++++++S+ +V ++D +EI IP +G R
Sbjct: 30 LIISPPKCGKTTLLRDLSKIISNGDSPLNRGFKVSVIDERSEIAASFRGIPQLDVGI--R 87
Query: 67 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 126
V + L+ K +I A+ + PEVII DEIGT + + GV +I T HG E+
Sbjct: 88 TDVYDNCLKSKGIILAIRSMAPEVIICDEIGTREDFESVLIAYNSGVSIISTIHGSSEED 147
Query: 127 IIKNPILSDL 136
+S+L
Sbjct: 148 FYNKLRMSNL 157
>gi|443631736|ref|ZP_21115916.1| stage III sporulation protein AA [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
gi|443347851|gb|ELS61908.1| stage III sporulation protein AA [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
Length = 305
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 67/129 (51%), Gaps = 7/129 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDE----FQKRVVIVDTSNEIGGD-GDIPHSAIGTARRM 67
L +G P GKTT++R++AR+ S + IVD +EI G IP G +R+
Sbjct: 140 LIIGPPQTGKTTLLRDLARLSSTGKNLMLPVKTGIVDERSEIAGCLRGIPQHQFG--QRI 197
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
V + + + ++ + + PEVIIVDEIG + A GV +I +AHG + ++
Sbjct: 198 DVLDACPKAEGLMMMIRSMSPEVIIVDEIGRVEDTDALLEALHAGVSVIVSAHGWSISDL 257
Query: 128 IKNPILSDL 136
+K P L L
Sbjct: 258 MKRPSLKRL 266
>gi|239627516|ref|ZP_04670547.1| stage III sporulation protein AA [Clostridiales bacterium
1_7_47_FAA]
gi|239517662|gb|EEQ57528.1| stage III sporulation protein AA [Clostridiales bacterium
1_7_47FAA]
Length = 332
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 14/148 (9%)
Query: 2 VYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK---------RVVIVDTSNEI 50
V D L+ G+ + L + P GKTT++R+I R +SD + V +VD +E+
Sbjct: 146 VMDFLYDGRFLNTLVISPPRCGKTTLLRDIIRQVSDGWVGHSGDRVPGVSVGVVDERSEL 205
Query: 51 GGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIA 109
+P + +G R V + + + M+ V P VI VDEIG+ +A A +
Sbjct: 206 AACYQGVPQNDLGM--RTDVLDCCPKSQGMMMLVRTMAPGVIAVDEIGSRQDAEAIEYVR 263
Query: 110 ERGVMLIGTAHGEWLENIIKNPILSDLI 137
G L T HG LE+I + P + L+
Sbjct: 264 NCGCALAATIHGSSLEDIRQKPSMGGLL 291
>gi|342732644|ref|YP_004771483.1| stage III sporulation protein AA [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|417959181|ref|ZP_12602037.1| Stage III sporulation protein AA, SpoIIIAA [Candidatus Arthromitus
sp. SFB-1]
gi|417965028|ref|ZP_12606647.1| Stage III sporulation protein AA, SpoIIIAA [Candidatus Arthromitus
sp. SFB-4]
gi|417968209|ref|ZP_12609250.1| Stage III sporulation protein AA, SpoIIIAA [Candidatus Arthromitus
sp. SFB-co]
gi|418372898|ref|ZP_12964990.1| Stage III sporulation protein AA, SpoIIIAA [Candidatus Arthromitus
sp. SFB-mouse-SU]
gi|342330099|dbj|BAK56741.1| stage III sporulation protein AA [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|380334058|gb|EIA24534.1| Stage III sporulation protein AA, SpoIIIAA [Candidatus Arthromitus
sp. SFB-1]
gi|380339205|gb|EIA27984.1| Stage III sporulation protein AA, SpoIIIAA [Candidatus Arthromitus
sp. SFB-4]
gi|380340147|gb|EIA28776.1| Stage III sporulation protein AA, SpoIIIAA [Candidatus Arthromitus
sp. SFB-co]
gi|380342567|gb|EIA31012.1| Stage III sporulation protein AA, SpoIIIAA [Candidatus Arthromitus
sp. SFB-mouse-SU]
Length = 266
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK-----RVVIVDTSNEIGGDG-DIPHSAIGTARR 66
L + P GKTT++R++++++S+ +V ++D +EI IP +G R
Sbjct: 110 LIISPPKCGKTTLLRDLSKIISNGDSPLNRGFKVSVIDERSEIAASFRGIPQLDVGI--R 167
Query: 67 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 126
V + L+ K +I A+ + PEVII DEIGT + + GV +I T HG E+
Sbjct: 168 TDVYDNCLKSKGIILAIRSMAPEVIICDEIGTREDFESVLIAYNSGVSIISTIHGSSEED 227
Query: 127 IIKNPILSDL 136
+S+L
Sbjct: 228 FYNKLRMSNL 237
>gi|152976597|ref|YP_001376114.1| sporulation stage III protein AA [Bacillus cytotoxicus NVH 391-98]
gi|152025349|gb|ABS23119.1| Sporulation stage III protein AA [Bacillus cytotoxicus NVH 391-98]
Length = 307
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEF------QKRVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R++AR +S +V IVD +EI G IP G
Sbjct: 138 MVIGPPQTGKTTLLRDVARCMSQGVGFANIPSCKVGIVDERSEIAGCVKGIPQYEFGP-- 195
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+++IVDEIG ++ A GV L +AHG +
Sbjct: 196 RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRMEDSEAIMEAVHAGVQLFISAHGFSFD 255
Query: 126 NIIKNPILSDLI 137
+I K P L ++
Sbjct: 256 DIRKRPSLKAVM 267
>gi|296333400|ref|ZP_06875853.1| stage III sporulation protein AA [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305675094|ref|YP_003866766.1| ATP-binding stage III sporulation protein [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296149598|gb|EFG90494.1| stage III sporulation protein AA [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305413338|gb|ADM38457.1| ATP-binding stage III sporulation protein [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 307
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 67/129 (51%), Gaps = 7/129 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDE----FQKRVVIVDTSNEIGGD-GDIPHSAIGTARRM 67
L +G P GKTT++R++AR+ S + IVD +EI G IP G +R+
Sbjct: 140 LIIGPPQTGKTTLLRDLARLSSTGKNHILPVKTGIVDERSEIAGCLRGIPQHQFG--QRI 197
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
V + + + ++ + + PEVIIVDEIG + A GV +I +AHG + ++
Sbjct: 198 DVLDACPKAEGLMMMIRSMSPEVIIVDEIGRVEDTDALLEALHAGVSVIVSAHGWSISDL 257
Query: 128 IKNPILSDL 136
+K P L L
Sbjct: 258 MKRPSLKRL 266
>gi|384456035|ref|YP_005668630.1| stage III sporulation protein AA [Candidatus Arthromitus sp.
SFB-mouse-Yit]
gi|418015948|ref|ZP_12655513.1| stage 3 sporulation protein AA [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|345506283|gb|EGX28577.1| stage 3 sporulation protein AA [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|346984378|dbj|BAK80054.1| stage III sporulation protein AA [Candidatus Arthromitus sp.
SFB-mouse-Yit]
Length = 271
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK-----RVVIVDTSNEIGGDG-DIPHSAIGTARR 66
L + P GKTT++R++++++S+ +V ++D +EI IP +G R
Sbjct: 115 LIISPPKCGKTTLLRDLSKIISNGDSPLNRGFKVSVIDERSEIAASFRGIPQLDVGI--R 172
Query: 67 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 126
V + L+ K +I A+ + PEVII DEIGT + + GV +I T HG E+
Sbjct: 173 TDVYDNCLKSKGIILAIRSMAPEVIICDEIGTREDFESVLIAYNSGVSIISTIHGSSEED 232
Query: 127 IIKNPILSDL 136
+S+L
Sbjct: 233 FYNKLRMSNL 242
>gi|323485467|ref|ZP_08090813.1| stage III sporulation protein AA [Clostridium symbiosum WAL-14163]
gi|323694458|ref|ZP_08108628.1| stage III sporulation protein AA [Clostridium symbiosum WAL-14673]
gi|355628505|ref|ZP_09049787.1| stage III sporulation protein AA [Clostridium sp. 7_3_54FAA]
gi|323401115|gb|EGA93467.1| stage III sporulation protein AA [Clostridium symbiosum WAL-14163]
gi|323501446|gb|EGB17338.1| stage III sporulation protein AA [Clostridium symbiosum WAL-14673]
gi|354819754|gb|EHF04192.1| stage III sporulation protein AA [Clostridium sp. 7_3_54FAA]
Length = 330
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 11/128 (8%)
Query: 13 LFVGRPGVGKTTVMREIARVLSD--------EFQKRVVIVDTSNEIGGD-GDIPHSAIGT 63
L + P GKTT++R+I R SD K V +VD +EIG IP + +G
Sbjct: 165 LIISPPRCGKTTLLRDIVRQASDGGSSGKRVRAGKTVGVVDERSEIGACFQGIPQNDVGL 224
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 123
R + + + M+ + + P+V+ VDEIG + + A R + G ++ T HG
Sbjct: 225 --RTDILDCCPKAAGMMMLIRSMAPDVVAVDEIGGDPDLEALRCVMNCGCRILATVHGTS 282
Query: 124 LENIIKNP 131
+E+I P
Sbjct: 283 MEDIRNKP 290
>gi|430759091|ref|YP_007209015.1| Stage III sporulation protein AA [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|430023611|gb|AGA24217.1| Stage III sporulation protein AA [Bacillus subtilis subsp. subtilis
str. BSP1]
Length = 307
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 9/132 (6%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDEFQKRVV-----IVDTSNEIGGD-GDIPHSAIGTA 64
+ L +G P GKTT++R++AR LS +K ++ IVD +EI G IP G
Sbjct: 138 NTLIIGPPQTGKTTLLRDLAR-LSSTGKKPMLPVKTGIVDERSEIAGCLRGIPQHQFG-- 194
Query: 65 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 124
+R+ V + + + ++ + + PEV+IVDEIG + A GV +I +AHG +
Sbjct: 195 QRIDVLDACPKAEGLMMMIRSMSPEVMIVDEIGRMEDTDALLEALHAGVSVIVSAHGWSI 254
Query: 125 ENIIKNPILSDL 136
+++K P L L
Sbjct: 255 SDLMKRPSLKRL 266
>gi|433462230|ref|ZP_20419819.1| stage III sporulation protein AA [Halobacillus sp. BAB-2008]
gi|432189119|gb|ELK46252.1| stage III sporulation protein AA [Halobacillus sp. BAB-2008]
Length = 325
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 67/133 (50%), Gaps = 7/133 (5%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLSDEFQK----RVVIVDTSNEIGGD-GDIPHSAIGTA 64
KS + +G P GKTT++R +++ + + +V +VD +EI +P +G
Sbjct: 137 KSTMIIGPPHSGKTTLLRALSKWIGSDHTGYRGCKVAVVDERSEIAASLRGVPQLEVGV- 195
Query: 65 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 124
R V + + M+ + + P+V+IVDEIG +A A R + GV +I + HG L
Sbjct: 196 -RTDVMDGCPKAAGMMMMIRSMSPDVLIVDEIGGLEDADAVREASYTGVQVICSIHGRTL 254
Query: 125 ENIIKNPILSDLI 137
+ + K P L+
Sbjct: 255 DGVRKRPSARSLV 267
>gi|321311927|ref|YP_004204214.1| stage III sporulation protein AA [Bacillus subtilis BSn5]
gi|320018201|gb|ADV93187.1| stage III sporulation protein AA [Bacillus subtilis BSn5]
Length = 307
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 70/130 (53%), Gaps = 9/130 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQKRVV-----IVDTSNEIGGD-GDIPHSAIGTARR 66
L +G P GKTT++R++AR LS +K ++ IVD +EI G IP G +R
Sbjct: 140 LIIGPPQTGKTTLLRDLAR-LSSTGKKPMLPVKTGIVDERSEIAGCLRGIPQHQFG--QR 196
Query: 67 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 126
+ V + + + ++ + + PEV+IVDEIG + A GV +I +AHG + +
Sbjct: 197 IDVLDACPKAEGLMMMIRSMSPEVMIVDEIGRMEDTDALLEALHAGVSVIVSAHGWSISD 256
Query: 127 IIKNPILSDL 136
++K P L L
Sbjct: 257 LMKRPSLKRL 266
>gi|347542681|ref|YP_004857318.1| stage III sporulation protein AA [Candidatus Arthromitus sp.
SFB-rat-Yit]
gi|346985717|dbj|BAK81392.1| stage III sporulation protein AA [Candidatus Arthromitus sp.
SFB-rat-Yit]
Length = 280
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK-----RVVIVDTSNEIGGDG-DIPHSAIGTARR 66
L + P GKTT++R++++++S+ +V I+D +EI +P IG R
Sbjct: 124 LIISPPKCGKTTLLRDLSKIISNGDSPLNRGFKVSIIDERSEIAASFRGVPQLDIGI--R 181
Query: 67 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 126
+ + L+ K +I A+ + PEVI+ DEIGT + + GV +I T HG E+
Sbjct: 182 TDIYDNCLKSKGIILAIRSMAPEVIVCDEIGTREDFESILVAYNSGVSIISTIHGNSEED 241
Query: 127 IIKNPILSDL 136
+S+L
Sbjct: 242 FYNKLRMSNL 251
>gi|168333637|ref|ZP_02691897.1| stage III sporulation protein AA [Epulopiscium sp. 'N.t. morphotype
B']
Length = 313
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 67/130 (51%), Gaps = 7/130 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLSD----EFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRM 67
L V P GKTT++R++ R LS+ + V IVD +EI IP + +G R
Sbjct: 152 LIVSPPKCGKTTILRDVIRNLSNGESLDVSYHVGIVDERSEIAACYMGIPQNDVGI--RT 209
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
V + + + + ++ + + PE+I VDEIG + + A GV +I T HG L +
Sbjct: 210 DVLDSAPKAEGILMLLRSMSPEIIAVDEIGRDEDYKAIFDALIVGVTVICTIHGSSLNDC 269
Query: 128 IKNPILSDLI 137
+ P+L D++
Sbjct: 270 LNKPLLKDML 279
>gi|331084722|ref|ZP_08333810.1| stage III sporulation protein AA [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330410816|gb|EGG90238.1| stage III sporulation protein AA [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 321
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 9/142 (6%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGDG-D 55
+ YD Y L + PG GKTT++R++ R +SD + + V +VD +E+G
Sbjct: 142 LTYDQQLY--HTLIISPPGCGKTTLLRDLIRQISDGNRWIQGESVGVVDERSELGACHLG 199
Query: 56 IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVML 115
I + +G R + + + + M+ + + P+++ VDEIG + HA G +
Sbjct: 200 IAQNELGI--RTDILDGCPKAEGMLMLIRSMAPKILAVDEIGAPEDIHAMEYAMHCGCRM 257
Query: 116 IGTAHGEWLENIIKNPILSDLI 137
+ T HG + + K P+L LI
Sbjct: 258 LATVHGTSMAEVQKKPVLQQLI 279
>gi|423082410|ref|ZP_17071002.1| stage III sporulation protein AA [Clostridium difficile
002-P50-2011]
gi|423087822|ref|ZP_17076208.1| stage III sporulation protein AA [Clostridium difficile
050-P50-2011]
gi|357544136|gb|EHJ26142.1| stage III sporulation protein AA [Clostridium difficile
050-P50-2011]
gi|357548736|gb|EHJ30596.1| stage III sporulation protein AA [Clostridium difficile
002-P50-2011]
Length = 322
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGDG-DIPHSAIGTAR 65
L + P GKTT++R+I R LS+ + +V +VD NEI G IP +G
Sbjct: 158 LIISPPQCGKTTLIRDIVRNLSNGNEDYGFKGLKVALVDERNEIAGAYLGIPQMDVGI-- 215
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R + E + + + + P VI+ DEIG+E E A + G+ LI T HG+ ++
Sbjct: 216 RTDIIETCPKDLGITMLLRSMSPNVIVTDEIGSEKEIKALYTALNGGIGLITTVHGDSID 275
Query: 126 NI 127
+I
Sbjct: 276 DI 277
>gi|440781945|ref|ZP_20960173.1| stage III sporulation protein AA [Clostridium pasteurianum DSM 525]
gi|440220663|gb|ELP59870.1| stage III sporulation protein AA [Clostridium pasteurianum DSM 525]
Length = 305
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 9/122 (7%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGTAR 65
+ + P GKTT++R+I R +S + K V ++D +EI D IP +G
Sbjct: 142 IIISPPNCGKTTLIRDITRNISSGSKNFGIRGKNVCVIDERSEICASSDGIPQLNVGI-- 199
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + + + ++ A+ + P+VI+ DEIGT + + S G+ LI T HG +E
Sbjct: 200 RTDVMDNCPKSQGIMMAIRSMAPDVIVCDEIGTYEDVKSILSALNCGINLITTIHGFGIE 259
Query: 126 NI 127
++
Sbjct: 260 DL 261
>gi|336234728|ref|YP_004587344.1| stage III sporulation protein AA [Geobacillus thermoglucosidasius
C56-YS93]
gi|335361583|gb|AEH47263.1| stage III sporulation protein AA [Geobacillus thermoglucosidasius
C56-YS93]
Length = 308
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEF------QKRVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R+ AR++S ++V IVD +EI G IP +G
Sbjct: 140 MIIGSPQTGKTTLLRDAARMISTGILARHIPSQKVGIVDERSEIAGCVKGIPQFQLGN-- 197
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+V+IVDEIG + A GV + T HG +
Sbjct: 198 RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRSEDGEAILEAVNAGVCIWTTVHGRNRK 257
Query: 126 NIIKNPILSDLI 137
++++ P L ++
Sbjct: 258 DVLQRPTLRPIM 269
>gi|398304497|ref|ZP_10508083.1| stage III sporulation protein AA [Bacillus vallismortis DV1-F-3]
Length = 307
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 67/129 (51%), Gaps = 7/129 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGD-GDIPHSAIGTARRM 67
L +G P GKTT++R++AR+ S + IVD +EI G IP G +R+
Sbjct: 140 LIIGPPQTGKTTLLRDLARLSSTGKNGMSPAKTGIVDERSEIAGCLRGIPQHQFG--QRI 197
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
V + + + ++ + + PEVIIVDEIG + A GV +I +AHG + ++
Sbjct: 198 DVLDACPKAEGLMMMIRSMSPEVIIVDEIGRIEDTDALLEALHAGVSVIVSAHGWSISDL 257
Query: 128 IKNPILSDL 136
+K P L L
Sbjct: 258 MKRPSLKRL 266
>gi|15895363|ref|NP_348712.1| stage III sporulation protein AA [Clostridium acetobutylicum ATCC
824]
gi|337737311|ref|YP_004636758.1| stage III sporulation protein AA, SpoIIIAA [Clostridium
acetobutylicum DSM 1731]
gi|384458819|ref|YP_005671239.1| Stage III sporulation protein AA, SpoIIIAA [Clostridium
acetobutylicum EA 2018]
gi|15025082|gb|AAK80052.1|AE007711_9 Stage III sporulation protein AA, SpoIIIAA [Clostridium
acetobutylicum ATCC 824]
gi|325509508|gb|ADZ21144.1| Stage III sporulation protein AA, SpoIIIAA [Clostridium
acetobutylicum EA 2018]
gi|336291043|gb|AEI32177.1| stage III sporulation protein AA, SpoIIIAA [Clostridium
acetobutylicum DSM 1731]
Length = 305
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 12/140 (8%)
Query: 8 YGKSIL---FVGRPGVGKTTVMREIARVLS---DEFQ---KRVVIVDTSNEIGGD-GDIP 57
YG ++L + P GKTT++R+I R +S + Q K+V ++D +EIG +
Sbjct: 133 YGNTVLNTIIISPPNCGKTTLLRDITRNISYGINSIQFRGKKVCVIDERSEIGACLNGVN 192
Query: 58 HSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIG 117
IG R + + + ++ A+ + PEVII DEIGT + + + GV LI
Sbjct: 193 QMDIGI--RTDILDNCPKSIGIMMAIRSMAPEVIICDEIGTYDDIKSILTAVNCGVKLIT 250
Query: 118 TAHGEWLENIIKNPILSDLI 137
T HG +E++ + D I
Sbjct: 251 TIHGFGIEDLNSRDVFKDAI 270
>gi|167758077|ref|ZP_02430204.1| hypothetical protein CLOSCI_00415 [Clostridium scindens ATCC 35704]
gi|167663974|gb|EDS08104.1| stage III sporulation protein AA [Clostridium scindens ATCC 35704]
Length = 312
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 18/148 (12%)
Query: 2 VYDLLHYGKSI---LFVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGDG 54
V+ + Y +S+ L + P GKTT++R++ R +SD V +VD +EIGG
Sbjct: 134 VFPHITYNRSLYHTLVISPPRCGKTTLLRDMIRQISDGNDWVRGMAVGVVDERSEIGG-- 191
Query: 55 DIPHSAIGTAR-----RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIA 109
+G A+ R V + + + MI + + PEVI VDEIG+ + HA
Sbjct: 192 ----CYMGVAQNHLGIRTDVLDGCPKAEGMIMLIRSMGPEVIAVDEIGSAEDVHAIEYAM 247
Query: 110 ERGVMLIGTAHGEWLENIIKNPILSDLI 137
G ++ T H +E + K P+L +I
Sbjct: 248 HCGCKMLATVHAGSMEELRKKPLLDRMI 275
>gi|325265391|ref|ZP_08132115.1| stage III sporulation protein AA [Clostridium sp. D5]
gi|324029392|gb|EGB90683.1| stage III sporulation protein AA [Clostridium sp. D5]
Length = 314
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 65/134 (48%), Gaps = 15/134 (11%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK----RVVIVDTSNEIGGDGDIPHSAIGTAR--- 65
L + P GKTT++R++ R +SD V +VD +EIGG +G A+
Sbjct: 152 LVISPPCCGKTTLIRDLIRQISDGNMYVKGCTVGVVDERSEIGG------CYLGVAQNEL 205
Query: 66 --RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 123
R V + + + MI + + P+VI VDEIG+ + HA + G +I + HG
Sbjct: 206 GMRTDVLDCCPKAEGMIMLIRSMAPQVIAVDEIGSPEDVHAIEYAMQCGCKMIASVHGLS 265
Query: 124 LENIIKNPILSDLI 137
++ P+L LI
Sbjct: 266 MDEAADKPVLGKLI 279
>gi|291545427|emb|CBL18535.1| stage III sporulation protein AA [Ruminococcus sp. SR1/5]
Length = 310
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 7/129 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK----RVVIVDTSNEIGGD-GDIPHSAIGTARRM 67
L V P GKTT++R+I R +S+ + V +VD +E+ G IP + +G R
Sbjct: 148 LIVSPPRCGKTTLLRDIIRQMSNGWGNISGVTVGVVDERSELAGCYQGIPQNDLGM--RT 205
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
+ + + + M + + P V+ VDE+G E + A S+ G LI TAHG +E
Sbjct: 206 DILDGCPKAEGMQMLIRSMSPVVVAVDELGKEEDFKAVESVIHCGCRLIATAHGASMEET 265
Query: 128 IKNPILSDL 136
+ P L
Sbjct: 266 LSQPFFRKL 274
>gi|304407059|ref|ZP_07388713.1| stage III sporulation protein AA [Paenibacillus curdlanolyticus
YK9]
gi|304344046|gb|EFM09886.1| stage III sporulation protein AA [Paenibacillus curdlanolyticus
YK9]
Length = 357
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 11 SILFVGRPGVGKTTVMREIARVLS----------DEFQKRVVIVDTSNEIGGD-GDIPHS 59
S L VG P GKTT +R++AR +S ++V IVD +EI +P
Sbjct: 154 STLVVGAPRQGKTTFIRDLARSISYGRWRSTAAAGWPGRKVGIVDERSEIAASVRGVPTF 213
Query: 60 AIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 119
+G R V + + + M+ + + PEV+IVDEIG E + A R GV +I TA
Sbjct: 214 DVGP--RTDVMDACPKAEGMMMMIRSMSPEVLIVDEIGREEDVEAIREAVRAGVSVIATA 271
Query: 120 H-GEWLENIIKNPI 132
H G+W E + I
Sbjct: 272 HAGDWQEAAARPAI 285
>gi|254974727|ref|ZP_05271199.1| stage III sporulation protein AA [Clostridium difficile QCD-66c26]
gi|255092116|ref|ZP_05321594.1| stage III sporulation protein AA [Clostridium difficile CIP 107932]
gi|255313853|ref|ZP_05355436.1| stage III sporulation protein AA [Clostridium difficile QCD-76w55]
gi|255516534|ref|ZP_05384210.1| stage III sporulation protein AA [Clostridium difficile QCD-97b34]
gi|255649634|ref|ZP_05396536.1| stage III sporulation protein AA [Clostridium difficile QCD-37x79]
gi|260682798|ref|YP_003214083.1| stage III sporulation protein AA [Clostridium difficile CD196]
gi|260686396|ref|YP_003217529.1| stage III sporulation protein AA [Clostridium difficile R20291]
gi|306519751|ref|ZP_07406098.1| stage III sporulation protein AA [Clostridium difficile QCD-32g58]
gi|384360380|ref|YP_006198232.1| stage III sporulation protein AA [Clostridium difficile BI1]
gi|260208961|emb|CBA61998.1| stage III sporulation protein AA [Clostridium difficile CD196]
gi|260212412|emb|CBE03268.1| stage III sporulation protein AA [Clostridium difficile R20291]
Length = 322
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGDG-DIPHSAIGTAR 65
L + P GKTT++R+I R LS+ + +V +VD NEI G +P +G
Sbjct: 158 LIISPPQCGKTTLIRDIVRNLSNGNEDYGFKGLKVALVDERNEIAGAYLGVPQMDVGI-- 215
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R + E + + + + P VI+ DEIG+E E A + G+ LI T HG+ ++
Sbjct: 216 RTDIIETCPKDLGITMLLRSMSPNVIVTDEIGSEKEIKALYTALNGGIGLITTVHGDSID 275
Query: 126 NI 127
+I
Sbjct: 276 DI 277
>gi|312110267|ref|YP_003988583.1| stage III sporulation protein AA [Geobacillus sp. Y4.1MC1]
gi|423719293|ref|ZP_17693475.1| stage III sporulation protein AA [Geobacillus thermoglucosidans
TNO-09.020]
gi|311215368|gb|ADP73972.1| stage III sporulation protein AA [Geobacillus sp. Y4.1MC1]
gi|383368196|gb|EID45471.1| stage III sporulation protein AA [Geobacillus thermoglucosidans
TNO-09.020]
Length = 308
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEF------QKRVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ +G P GKTT++R+ AR++S ++V IVD +EI G IP +G
Sbjct: 140 MIIGSPQTGKTTLLRDAARMISTGILARHIPSQKVGIVDERSEIAGCVKGIPQFQLGN-- 197
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P+V+IVDEIG + A GV + T HG +
Sbjct: 198 RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRSEDGAAILEAVNAGVCIWTTVHGRNRK 257
Query: 126 NIIKNPILSDLI 137
++++ P L ++
Sbjct: 258 DVLQRPTLRPIM 269
>gi|255655197|ref|ZP_05400606.1| stage III sporulation protein AA [Clostridium difficile QCD-23m63]
gi|296451182|ref|ZP_06892923.1| stage III sporulation protein AA [Clostridium difficile NAP08]
gi|296880466|ref|ZP_06904428.1| stage III sporulation protein AA [Clostridium difficile NAP07]
gi|296260003|gb|EFH06857.1| stage III sporulation protein AA [Clostridium difficile NAP08]
gi|296428420|gb|EFH14305.1| stage III sporulation protein AA [Clostridium difficile NAP07]
Length = 322
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGDG-DIPHSAIGTAR 65
L + P GKTT++R+I R LS+ + +V +VD NEI G +P +G
Sbjct: 158 LIISPPQCGKTTLIRDIVRNLSNGNEDYGFKGLKVALVDERNEIAGAYLGVPQMDVGI-- 215
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R + E + + + + P VI+ DEIG+E E A + G+ LI T HG+ ++
Sbjct: 216 RTDIIETCPKDLGITMLLRSMSPNVIVTDEIGSEKEIKALYTALNGGIGLITTVHGDSID 275
Query: 126 NI 127
+I
Sbjct: 276 DI 277
>gi|225174900|ref|ZP_03728897.1| stage III sporulation protein AA [Dethiobacter alkaliphilus AHT 1]
gi|225169540|gb|EEG78337.1| stage III sporulation protein AA [Dethiobacter alkaliphilus AHT 1]
Length = 341
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLS--DEFQKR----VVIVDTSNEIGGD-GDIPHSAIGTAR 65
L + P GKTTV+R++AR+ D R V IVD +EI G +P +G
Sbjct: 170 LIISAPQAGKTTVLRDLARLFGNGDAASGRPAFNVGIVDERSEIAGCYQGVPQLDVGL-- 227
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + + + M+ V + P++++ DE+G +A A G ++ TAHG+ +
Sbjct: 228 RSDVLDGCPKAEGMMMLVRSMSPQIVVTDELGRPEDARAVEEAVNTGASILATAHGQSMT 287
Query: 126 NIIKNPILSDLI 137
+ + P L+ L+
Sbjct: 288 ELFRRPSLAYLL 299
>gi|325661685|ref|ZP_08150308.1| stage III sporulation protein AA [Lachnospiraceae bacterium
4_1_37FAA]
gi|325471938|gb|EGC75153.1| stage III sporulation protein AA [Lachnospiraceae bacterium
4_1_37FAA]
Length = 321
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 70/142 (49%), Gaps = 9/142 (6%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGDG-D 55
+ YD Y L + PG GKTT++R++ R +SD + + V +VD +E+G
Sbjct: 142 LTYDQQLY--HTLIISPPGCGKTTLLRDLIRQISDGNRWIQGESVGVVDERSELGACHLG 199
Query: 56 IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVML 115
+ + +G R + + + + M+ + + P+++ VDEIG + HA G +
Sbjct: 200 VAQNELGI--RTDILDGCPKAEGMLMLIRSMAPKILAVDEIGAPEDIHAMEYAMHCGCRM 257
Query: 116 IGTAHGEWLENIIKNPILSDLI 137
+ T HG + + K P+L LI
Sbjct: 258 LATVHGTSMAEVQKKPVLQQLI 279
>gi|390935036|ref|YP_006392541.1| stage III sporulation protein AA [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389570537|gb|AFK86942.1| stage III sporulation protein AA [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 334
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 9/134 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSD-----EFQ-KRVVIVDTSNEIGGD-GDIPHSAIGTAR 65
L + P GKTT++R+IAR +S+ FQ ++V IVD +EI IP + +G
Sbjct: 161 LIISPPQCGKTTLIRDIARNISNGMPELNFQGEKVSIVDERSEIAACFKGIPQNDVGY-- 218
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + +H ++ + + P+VII DEIG + + GV +I T HG +E
Sbjct: 219 RTDVLDLCPKHIGILMMIRSMSPKVIITDEIGKVEDISSIHEALNAGVSIITTVHGNGIE 278
Query: 126 NIIKNPILSDLIGG 139
++ + + +++
Sbjct: 279 DVARKKYIDEMLNN 292
>gi|311030965|ref|ZP_07709055.1| stage III sporulation protein AA [Bacillus sp. m3-13]
Length = 310
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 71/134 (52%), Gaps = 9/134 (6%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDEFQKRVV------IVDTSNEIGGD-GDIPHSAIGT 63
S + +G P GKTT++R++AR++S +++ V IVD +EI G IP +G
Sbjct: 140 STMVIGPPQTGKTTLLRDLARIMSSGCEEKRVASCKVGIVDERSEIAGCVHGIPQHDLG- 198
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 123
+R+ V + + + M+ + + P+VI+VDEIG ++ A GV L+ + H
Sbjct: 199 -QRVDVLDSCPKAEGMMMMIRSMSPDVIVVDEIGRMEDSEAVMEAVNAGVGLLMSVHAFS 257
Query: 124 LENIIKNPILSDLI 137
+ + P L +++
Sbjct: 258 FDELKSRPSLREIL 271
>gi|302392502|ref|YP_003828322.1| stage III sporulation protein AA [Acetohalobium arabaticum DSM
5501]
gi|302204579|gb|ADL13257.1| stage III sporulation protein AA [Acetohalobium arabaticum DSM
5501]
Length = 330
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 9/133 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
L + P GKTT++R++ R LS + +V +VD E+GG + + +G
Sbjct: 161 LIISPPQCGKTTLLRDLIRQLSTGLPEQNFSGLKVGVVDERGELGGSYQGVVQNQLGIRT 220
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
+ P Q MI + PEVI+ DEIG+ + A GV ++ + HG L+
Sbjct: 221 DLLANCPKSQG--MILLIRAMSPEVIVTDEIGSRQDVQAICEAVNAGVKIVTSVHGRDLK 278
Query: 126 NIIKNPILSDLIG 138
I + P L L+G
Sbjct: 279 EIKQRPNLEKLLG 291
>gi|220929335|ref|YP_002506244.1| stage III sporulation protein AA [Clostridium cellulolyticum H10]
gi|219999663|gb|ACL76264.1| stage III sporulation protein AA [Clostridium cellulolyticum H10]
Length = 331
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Query: 13 LFVGRPGVGKTTVMREIARVLSD---EFQ---KRVVIVDTSNEIGGDGD-IPHSAIGTAR 65
L VG P GKTT++R+++R+LS E+ +V IVD +EI +P S +G
Sbjct: 166 LIVGPPQCGKTTILRDLSRMLSSGETEYGFSGMKVGIVDERSEIAACCKGVPQSDVGY-- 223
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 121
R V + + M + + PE+II DEIGT + A + G+ +I +AHG
Sbjct: 224 RTDVMDGCPKALGMEMLLRSMSPEIIITDEIGTHGDKEAILKVLNSGIKIIASAHG 279
>gi|402815122|ref|ZP_10864715.1| stage III sporulation protein AA [Paenibacillus alvei DSM 29]
gi|402507493|gb|EJW18015.1| stage III sporulation protein AA [Paenibacillus alvei DSM 29]
Length = 335
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 70/137 (51%), Gaps = 12/137 (8%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDEFQK---------RVVIVDTSNEIGGD-GDIPHSA 60
S L V P GKTT++R++AR +S +V IVD +EI G +P
Sbjct: 155 STLVVSPPQHGKTTMLRDMARAVSSGCWNHPQAVWKALKVGIVDERSEIAGCMKGVPSYN 214
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
+G R V + + + ++ + + P+V++VDE G E + A + GV +I + H
Sbjct: 215 LGY--RTDVIDGCPKAEGLMMFIRSMSPDVLVVDEFGREEDYDAMQEAIHAGVRMIASVH 272
Query: 121 GEWLENIIKNPILSDLI 137
G +E+I++ P L+ L+
Sbjct: 273 GSDVEDILRRPGLASLL 289
>gi|332799361|ref|YP_004460860.1| stage III sporulation protein AA [Tepidanaerobacter acetatoxydans
Re1]
gi|438002504|ref|YP_007272247.1| Stage III sporulation protein AA [Tepidanaerobacter acetatoxydans
Re1]
gi|332697096|gb|AEE91553.1| stage III sporulation protein AA [Tepidanaerobacter acetatoxydans
Re1]
gi|432179298|emb|CCP26271.1| Stage III sporulation protein AA [Tepidanaerobacter acetatoxydans
Re1]
Length = 340
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 28/179 (15%)
Query: 5 LLHYGKSI--LFVGRPGVGKTTVMREIARVLS---DEFQKR---VVIVDTSNEIGGDGD- 55
+++ GK++ L + P GKTT++R+I R LS DEF + + +VD +EI +
Sbjct: 157 IINGGKALNTLIISPPKAGKTTLLRDIIRQLSSGVDEFGIKGFNIGLVDERSEIACCYEG 216
Query: 56 IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVML 115
IP + +G R V + + K ++ + + P++I DEIG + A GV +
Sbjct: 217 IPQNDVGI--RTDVLDSCPKAKGIMLLLRSMSPDIIATDEIGRNEDVIAIEEAINTGVTI 274
Query: 116 IGTAHGEWLENIIKNPILSDLI-----------------GGVDTVTLGDEEARARRCQK 157
I TAHG L++I + P + LI G ++ + G+ +C+K
Sbjct: 275 ITTAHGSDLDDIRRRPTIRKLINKGFFDRYIILGTSSGVGSIEAILKGNNFENIYKCKK 333
>gi|163816778|ref|ZP_02208141.1| hypothetical protein COPEUT_02968 [Coprococcus eutactus ATCC 27759]
gi|158448035|gb|EDP25030.1| stage III sporulation protein AA [Coprococcus eutactus ATCC 27759]
Length = 294
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPE 71
L V P GKTT++R+I RV+S+ V +VD +EI IP + +G R V +
Sbjct: 138 LIVSAPCHGKTTLLRDIIRVVSNS-GTTVGVVDERSEIAACYKGIPQNDVGI--RTDVLD 194
Query: 72 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
+ M+ V PE+I VDEIG A+ A + G L+ TAHG ++++
Sbjct: 195 CCPKAAGMMMLVRTMAPELIAVDEIGGPADVDAIFGVVNCGCRLLATAHGYSIDDV 250
>gi|332652603|ref|ZP_08418348.1| stage III sporulation protein AA [Ruminococcaceae bacterium D16]
gi|332517749|gb|EGJ47352.1| stage III sporulation protein AA [Ruminococcaceae bacterium D16]
Length = 303
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 6/131 (4%)
Query: 11 SILFVGRPGVGKTTVMREIARVLS---DEFQKRVVIVDTSNEIGGD-GDIPHSAIGTARR 66
S L + PG GKTT++R++ R++S +RV + D E+ +P +G R
Sbjct: 149 STLILAPPGAGKTTLLRDLIRMVSHGEGMTPQRVAVADERGEVAALWNGVPQLDVG--ER 206
Query: 67 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 126
V E + + ++ + P+V+ DEI + A S A GV L+ TAHG E+
Sbjct: 207 TDVLEGCPKAQALMMLLRAMNPQVLAADEITAPEDVAALISAAGCGVKLLATAHGSARED 266
Query: 127 IIKNPILSDLI 137
+ + P+ +L+
Sbjct: 267 LARRPLYRELM 277
>gi|374603523|ref|ZP_09676501.1| stage III sporulation protein AA [Paenibacillus dendritiformis
C454]
gi|374390825|gb|EHQ62169.1| stage III sporulation protein AA [Paenibacillus dendritiformis
C454]
Length = 341
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 13/148 (8%)
Query: 1 MVYDLLH-YGKSILFVGRPGVGKTTVMREIARVLSDEF---------QKRVVIVDTSNEI 50
M+ D H + L V P GKTT++R++ R + +V +VD +EI
Sbjct: 144 MLLDFKHAHVHHTLIVSPPQQGKTTLLRDLVRAIGSGLWHHPEARWKALKVGVVDERSEI 203
Query: 51 GGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIA 109
G +P +G R V + + + M+ + + P+V+ VDE+G E + A R
Sbjct: 204 AGCIKGVPSYDLGY--RTDVMDGCPKAEGMMMFIRSMSPDVLAVDEMGREEDLLAMREAM 261
Query: 110 ERGVMLIGTAHGEWLENIIKNPILSDLI 137
GV LI TAH E ++++++ P L L+
Sbjct: 262 HAGVRLIATAHAEDMDDLLRRPGLQQLL 289
>gi|283797254|ref|ZP_06346407.1| stage III sporulation protein AA [Clostridium sp. M62/1]
gi|291075104|gb|EFE12468.1| stage III sporulation protein AA [Clostridium sp. M62/1]
Length = 427
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 64/131 (48%), Gaps = 7/131 (5%)
Query: 12 ILFVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGD-GDIPHSAIGTARR 66
+L + P GKTT++R++ R +SD K V IVD +EI I + +G R
Sbjct: 210 VLILSPPCCGKTTLLRDLVRKISDGCGYMEGKTVGIVDERSEIAACFQGIAQNDVGM--R 267
Query: 67 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 126
V + + + M+ + + P+V+ VDEIG + A R A G LI TAHG ++
Sbjct: 268 SDVLDGCPKAQGMMMLIRSMAPQVLAVDEIGGREDLEALRYAAGCGCSLIATAHGTSYQD 327
Query: 127 IIKNPILSDLI 137
+ P +L
Sbjct: 328 VEAKPAFRELF 338
>gi|374296405|ref|YP_005046596.1| stage III sporulation protein AA [Clostridium clariflavum DSM
19732]
gi|359825899|gb|AEV68672.1| stage III sporulation protein AA [Clostridium clariflavum DSM
19732]
Length = 340
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 12/133 (9%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGG--DGDIPHSAIGTA 64
L + P GKTT++R+IAR +SD + +V IVD +EI G P +G
Sbjct: 171 LIISPPKCGKTTILRDIARSISDGVAQIGLKGLKVGIVDERSEIAACFKGS-PQKQVGV- 228
Query: 65 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 124
R V + + M + + P+VII DEIG+ + A + GV ++ TAHG +
Sbjct: 229 -RTDVLDACPKQLGMSMLLRSMSPDVIITDEIGSSGDKEALMQVINAGVKIVTTAHGYSI 287
Query: 125 ENI-IKNPILSDL 136
+ ++ +LS L
Sbjct: 288 SQLKLRKEVLSML 300
>gi|410460620|ref|ZP_11314295.1| stage III sporulation protein AA [Bacillus azotoformans LMG 9581]
gi|409926878|gb|EKN64030.1| stage III sporulation protein AA [Bacillus azotoformans LMG 9581]
Length = 312
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ G P GKTT++R++AR++S +V IVD +EI G IP G
Sbjct: 142 IIYGPPQTGKTTLLRDMARMMSTGSYDSNIPSFKVGIVDERSEIAGCVKGIPQHQFGP-- 199
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + + M+ + + P++++VDEIG + A GV L + HG +E
Sbjct: 200 RIDVLDACPKAEGMMMLIRSMSPDILVVDEIGRMEDTEAILEAVNAGVALFISVHGSSME 259
Query: 126 NIIKNPILSDLI 137
++ K P + L+
Sbjct: 260 DLYKRPSIKPLM 271
>gi|51893000|ref|YP_075691.1| stage III sporulation protein AA [Symbiobacterium thermophilum IAM
14863]
gi|51856689|dbj|BAD40847.1| stage III sporulation protein AA [Symbiobacterium thermophilum IAM
14863]
Length = 292
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 9/134 (6%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGT 63
S L V P GKTT++R++ R LS + +V +VD +E+ G +P +G
Sbjct: 129 STLLVSPPQAGKTTLLRDLVRQLSTGVPRLGLRGLKVGLVDERSEVAGCVCGVPQRDVGP 188
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 123
R V + + + ++ + P+V+ DEIG +A A GV ++ TAHG
Sbjct: 189 --RTDVLDGCPKAEGLMLMIRALSPQVVAADEIGRPEDAVAVMEALHAGVAVLATAHGAG 246
Query: 124 LENIIKNPILSDLI 137
L ++ + P L++L+
Sbjct: 247 LSDVRRRPALAELL 260
>gi|331091290|ref|ZP_08340131.1| stage III sporulation protein AA [Lachnospiraceae bacterium
2_1_46FAA]
gi|330404737|gb|EGG84276.1| stage III sporulation protein AA [Lachnospiraceae bacterium
2_1_46FAA]
Length = 307
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 15/134 (11%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGDGDIPHSAIGTAR--- 65
L + P GKTT++R++ R +SD + V +VD +E+GG +GTA+
Sbjct: 143 LIISPPRCGKTTLLRDMIRQISDGNRWVKGVPVGVVDERSELGG------CYMGTAQNEL 196
Query: 66 --RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 123
R + + + M+ + + P+VI VDEIG E A G ++ TAHG
Sbjct: 197 GIRTDILDCCPKADGMLMLIRSMAPQVIAVDEIGAREEIRAIEYALHCGCKMLATAHGVS 256
Query: 124 LENIIKNPILSDLI 137
+E + K P LI
Sbjct: 257 MEEMKKKPFFEQLI 270
>gi|304316750|ref|YP_003851895.1| stage III sporulation protein AA [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778252|gb|ADL68811.1| stage III sporulation protein AA [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 333
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 11/135 (8%)
Query: 13 LFVGRPGVGKTTVMREIARVLSD-----EFQ-KRVVIVDTSNEIGG--DGDIPHSAIGTA 64
L + P GKTT++R+IAR +S+ +F + V I+D +EI G+ P + +G
Sbjct: 161 LIISPPQCGKTTLLRDIARNISNGMADLDFNGENVSIIDERSEIAACFKGN-PQNDVGY- 218
Query: 65 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 124
R V + +H ++ + + P+VII DEIG + A GV +I T HG+ +
Sbjct: 219 -RTDVLDSCPKHIGILMMIRSMSPKVIITDEIGKIEDILAIHEALNAGVSIITTVHGKDI 277
Query: 125 ENIIKNPILSDLIGG 139
E+I++ + D++
Sbjct: 278 EDIMRKKHIDDMLNN 292
>gi|355672461|ref|ZP_09058391.1| stage III sporulation protein AA [Clostridium citroniae WAL-17108]
gi|354815162|gb|EHE99758.1| stage III sporulation protein AA [Clostridium citroniae WAL-17108]
Length = 328
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 12/146 (8%)
Query: 2 VYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK-------RVVIVDTSNEIGG 52
V D L+ + + L + P GKTT++R+I R +S+ + V +VD +E+
Sbjct: 146 VMDYLYMDRFLNTLIISPPRCGKTTLLRDIIRQVSNGRSRDRWIPGMSVGVVDERSELAA 205
Query: 53 D-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAER 111
IP + +G R V + + + M+ V P VI VDEIG+ + A +
Sbjct: 206 CYQGIPQNDLGV--RTDVLDCCPKSQGMMMLVRTMAPGVIAVDEIGSRQDMEAIEYVRNC 263
Query: 112 GVMLIGTAHGEWLENIIKNPILSDLI 137
G L T HG LE+I + P + +L+
Sbjct: 264 GCSLAATIHGNSLEDIRQKPCMGELL 289
>gi|313114131|ref|ZP_07799683.1| putative stage III sporulation protein AA [Faecalibacterium cf.
prausnitzii KLE1255]
gi|310623540|gb|EFQ06943.1| putative stage III sporulation protein AA [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 297
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 20/133 (15%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGD---IPH----SAIGT 63
+L VG P GKTT++R+IAR L+ Q+R +VD EI GD +P S I
Sbjct: 151 GMLVVGEPDSGKTTLLRQIARELAG-MQRRACVVDERCEIFPPGDSEKMPPLDLLSGIPK 209
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 123
R +Q+ A+ P+VI++DE+GT AE A GV + + H
Sbjct: 210 ERAVQM------------ALRTLSPQVILLDELGTLAETAALEQGFYSGVDFVASVHAAS 257
Query: 124 LENIIKNPILSDL 136
+E + P + L
Sbjct: 258 VEEAARRPQVQAL 270
>gi|433654894|ref|YP_007298602.1| stage III sporulation protein AA [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433293083|gb|AGB18905.1| stage III sporulation protein AA [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 333
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 11/135 (8%)
Query: 13 LFVGRPGVGKTTVMREIARVLSD-----EFQ-KRVVIVDTSNEIGG--DGDIPHSAIGTA 64
L + P GKTT++R+IAR +S+ +F + V I+D +EI G+ P + +G
Sbjct: 161 LIISPPQCGKTTLLRDIARNISNGMADLDFNGENVSIIDERSEIAACFKGN-PQNDVGY- 218
Query: 65 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 124
R V + +H ++ + + P+VII DEIG + A GV +I T HG+ +
Sbjct: 219 -RTDVLDSCPKHIGILMMIRSMSPKVIITDEIGKIEDILAIHEALNAGVSIITTVHGKDI 277
Query: 125 ENIIKNPILSDLIGG 139
E+I++ + D++
Sbjct: 278 EDIMRKKHIDDMLNN 292
>gi|308069614|ref|YP_003871219.1| stage III sporulation protein AA [Paenibacillus polymyxa E681]
gi|305858893|gb|ADM70681.1| Stage III sporulation protein AA [Paenibacillus polymyxa E681]
Length = 331
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 12/146 (8%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLSDEFQK---------RVVIVDTSNEIGGD-GDIPHS 59
+ L + P GKTT++R++AR LS + +V I+D +EI G IP
Sbjct: 151 RHTLILSPPQHGKTTLLRDLARQLSYGGMESNGGRRNGLKVGIIDERSEIAGSHKGIPGF 210
Query: 60 AIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 119
+G R V + + + M+ + + P+V+IVDEIG +A A R G+ +I +A
Sbjct: 211 DVGP--RTDVLDGCPKAEGMMMMIRSMSPDVLIVDEIGRPEDAEAVREALHAGIAVIASA 268
Query: 120 HGEWLENIIKNPILSDLIGGVDTVTL 145
HG + + P + L G + L
Sbjct: 269 HGRDVAEMATRPAFAGLTTGQELFQL 294
>gi|295093404|emb|CBK82495.1| stage III sporulation protein AA [Coprococcus sp. ART55/1]
Length = 310
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPE 71
L V P GKTT++R+I RV+SD V +VD +EI +P + +G R V +
Sbjct: 154 LIVSAPCHGKTTLLRDIIRVVSDGGMT-VGVVDERSEIAACYKGVPQNDVGM--RTDVLD 210
Query: 72 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
+ M+ V P++I VDEIG + + A + G L+ TAHG ++++
Sbjct: 211 CCPKASGMMMLVRTMAPDLIAVDEIGGQQDVDAIFGVINCGCRLLATAHGYSMDDV 266
>gi|357012942|ref|ZP_09077941.1| stage III sporulation protein AA [Paenibacillus elgii B69]
Length = 328
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 68/133 (51%), Gaps = 10/133 (7%)
Query: 13 LFVGRPGVGKTTVMREIARVL----SDEFQKR---VVIVDTSNEIGGD-GDIPHSAIGTA 64
L V P GKTT++R++AR+L +D +R + IVD +EI +P +G
Sbjct: 156 LIVSPPQQGKTTLVRDLARLLGTGGADNGLRRSFKIGIVDERSEIAACVKGVPRFDVGY- 214
Query: 65 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 124
R V + + + M+ + + PEV+I DEIG +A A GV +I TAHG
Sbjct: 215 -RTDVLDGCPKAEGMMMMIRSMSPEVLIADEIGRAEDALAIHEALHAGVGVIATAHGRDA 273
Query: 125 ENIIKNPILSDLI 137
+ + PIL +L+
Sbjct: 274 AELKRRPILRELL 286
>gi|218132216|ref|ZP_03461020.1| hypothetical protein BACPEC_00073 [[Bacteroides] pectinophilus ATCC
43243]
gi|217992875|gb|EEC58875.1| stage III sporulation protein AA [[Bacteroides] pectinophilus ATCC
43243]
Length = 299
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 12/146 (8%)
Query: 2 VYDLLHYGKSI---LFVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGG-- 52
VY +H I L + PG GKTT++R++ R +S+ + V +VD +EI
Sbjct: 132 VYGFIHNSTQIENTLIISPPGCGKTTMLRDLIRQISNGNSYYEGQTVGVVDERSEIAACY 191
Query: 53 DGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERG 112
+G P + +G R V + + + M+ V + P VI VDEI T + A R + G
Sbjct: 192 NGR-PQNDLGI--RTDVLDCCPKAEGMVMLVRSMSPRVIAVDEIATPDDIEAVRYVMNCG 248
Query: 113 VMLIGTAHGEWLENIIKNPILSDLIG 138
+I TAH + + + P ++L+
Sbjct: 249 CSIIATAHAYNADELRQKPQFAELLA 274
>gi|374324640|ref|YP_005077769.1| stage III sporulation protein AA [Paenibacillus terrae HPL-003]
gi|357203649|gb|AET61546.1| stage III sporulation protein AA [Paenibacillus terrae HPL-003]
Length = 331
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 12/143 (8%)
Query: 13 LFVGRPGVGKTTVMREIARVLS---------DEFQKRVVIVDTSNEIGGD-GDIPHSAIG 62
L + P GKTT++R++AR LS +V I+D +EI G IP +G
Sbjct: 154 LILSPPQHGKTTLLRDLARQLSYGGLESNGGRRSGLKVGIIDERSEIAGSHKGIPGFDVG 213
Query: 63 TARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 122
R V + + + M+ + + P+V+IVDEIG +A A R G+ +I +AHG
Sbjct: 214 P--RTDVLDGCPKAEGMMMMIRSMSPDVLIVDEIGRPEDAEAVREALHAGIAVIASAHGR 271
Query: 123 WLENIIKNPILSDLIGGVDTVTL 145
+ + P + L G + L
Sbjct: 272 DVAEMATRPAFAGLTTGQELFQL 294
>gi|420156698|ref|ZP_14663538.1| putative stage III sporulation protein AA [Clostridium sp. MSTE9]
gi|394756708|gb|EJF39767.1| putative stage III sporulation protein AA [Clostridium sp. MSTE9]
Length = 337
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 61/116 (52%), Gaps = 8/116 (6%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLSDEFQ---KRVVIVDTSNEIGG--DGDIPHSAIGTA 64
+ +L G P GKTT++R++AR L+ +++ +VD E+ G GD + +G
Sbjct: 156 QGVLLAGAPSTGKTTILRDLARQLAGGGTLPPRKITVVDERGELAGVYRGD-AQNDLGCC 214
Query: 65 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
+ P Q +++A+ + PEVI+ DE+G+E E A + GV LI + H
Sbjct: 215 CDILDGYPKSQG--ILQAIRSLSPEVILCDELGSERETAAVEEVVNAGVSLIVSVH 268
>gi|336434712|ref|ZP_08614434.1| stage III sporulation protein AA [Lachnospiraceae bacterium
1_4_56FAA]
gi|336008491|gb|EGN38507.1| stage III sporulation protein AA [Lachnospiraceae bacterium
1_4_56FAA]
Length = 313
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 7/130 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLSD--EFQK--RVVIVDTSNEIGGDG-DIPHSAIGTARRM 67
L + P GKTT++R++ R +SD + K V +VD +E+GG I + IG R
Sbjct: 152 LIISPPCCGKTTLIRDMIRQISDGNAYVKGCTVGVVDERSELGGCYLGIAQNDIGM--RT 209
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
+ + + + MI + + P V+ +DEIG E E A G LI + HG LE I
Sbjct: 210 DILDCCPKAEGMILLIRSMAPRVLAIDEIGGEEEIRALEYAMHCGCKLIASVHGSDLEEI 269
Query: 128 IKNPILSDLI 137
+ P + +LI
Sbjct: 270 SERPGVKELI 279
>gi|345019757|ref|ZP_08783370.1| stage III sporulation protein AA [Ornithinibacillus scapharcae
TW25]
Length = 328
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGD-GDIPHSAIGTARRM 67
L VG P GKTT++R+I R++S ++ K+V +VD +EI IP +G RR
Sbjct: 141 LIVGSPQSGKTTLIRDIIRIISSGWKTIPPKKVGVVDERSEIAACLKGIPQHNLG--RRT 198
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
V + + + M+ + + PE+++VDEIG++ + A + GV +I T HG+ L+ +
Sbjct: 199 DVLDACPKAEGMMMMIRSMSPEILVVDEIGSDKDVQALMNAINAGVTVICTIHGQTLDEL 258
Query: 128 IKNPILSDLI 137
K P + L+
Sbjct: 259 KKRPSIIPLL 268
>gi|160880656|ref|YP_001559624.1| stage III sporulation protein AA [Clostridium phytofermentans ISDg]
gi|160429322|gb|ABX42885.1| stage III sporulation protein AA [Clostridium phytofermentans ISDg]
Length = 322
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 13/136 (9%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQKR----------VVIVDTSNEIGGDG-DIPHSAI 61
L + PG GKTT++R++ R LSD Q V +VD +EI P + +
Sbjct: 155 LIISPPGCGKTTLLRDVIRQLSDGEQDTKGGSYREGIPVGVVDERSEIAACYMGTPQNDL 214
Query: 62 GTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 121
G R V + + K M+ + + P V+ VDEIG + A G+ +I T HG
Sbjct: 215 GI--RTDVLDCCPKAKGMMLLIRSMSPSVLAVDEIGLGEDIEAIHYAMGCGIKMIATVHG 272
Query: 122 EWLENIIKNPILSDLI 137
++ + P+L +LI
Sbjct: 273 GTIDEVRDKPLLGELI 288
>gi|251796305|ref|YP_003011036.1| stage III sporulation protein AA [Paenibacillus sp. JDR-2]
gi|247543931|gb|ACT00950.1| stage III sporulation protein AA [Paenibacillus sp. JDR-2]
Length = 350
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 69/139 (49%), Gaps = 14/139 (10%)
Query: 11 SILFVGRPGVGKTTVMREIARVLS----DEFQ-------KRVVIVDTSNEIGGD-GDIPH 58
S L + P GKTT++R+IAR +S F+ ++V IVD +EI IP
Sbjct: 154 STLILAPPQQGKTTIVRDIARSISYGHWGLFENAAGWAGRKVGIVDERSEIAACVRGIPT 213
Query: 59 SAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGT 118
+G R + + + + M+ + + PEV+I DEIG + A R + G+ +I T
Sbjct: 214 FDVGP--RTDIMDACPKAEGMMMLLRSMSPEVVIADEIGRPEDGEAIREASHAGISVIAT 271
Query: 119 AHGEWLENIIKNPILSDLI 137
AH L++ P+L L+
Sbjct: 272 AHAYDLQDAKGRPVLQQLL 290
>gi|291525262|emb|CBK90849.1| Uncharacterized protein conserved in bacteria [Eubacterium rectale
DSM 17629]
gi|291529279|emb|CBK94865.1| Uncharacterized protein conserved in bacteria [Eubacterium rectale
M104/1]
Length = 313
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 65/121 (53%), Gaps = 9/121 (7%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQKR----VVIVDTSNEIGGDG-DIPHSAIGTARRM 67
L + RPG GKTT +R+ R+LSD + V +VD +EI + + IG + +
Sbjct: 136 LVISRPGEGKTTFLRDCIRILSDGCDGKNALKVSVVDERSEIAACYLGVAQNDIGNSSDV 195
Query: 68 QVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 126
P SL ++++ ++ P+VI VDE+G E++ A + G+ ++G+ HG ++
Sbjct: 196 LDNCPKSLGMRMLLRSMS---PDVIAVDELGGESDIEALNQLVSCGIRILGSVHGTNADD 252
Query: 127 I 127
+
Sbjct: 253 L 253
>gi|354582540|ref|ZP_09001441.1| stage III sporulation protein AA [Paenibacillus lactis 154]
gi|353198832|gb|EHB64298.1| stage III sporulation protein AA [Paenibacillus lactis 154]
Length = 332
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 12/135 (8%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEF---------QKRVVIVDTSNEIGG-DGDIPHSAIG 62
L + P GKTT++R++AR +S +V IVD +EI G +P +G
Sbjct: 156 LILSPPQHGKTTLLRDLARQISYGQWGAGTVRWPGMKVGIVDERSEIAGCQRGVPGFDVG 215
Query: 63 TARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 122
R V + + + M+ + + P+V+IVDEIG +A A G+ +I TAHG
Sbjct: 216 P--RTDVLDGCPKAEGMMMMIRSMSPDVLIVDEIGRAEDAEAVVEALHAGISVIATAHGS 273
Query: 123 WLENIIKNPILSDLI 137
++++ P LS LI
Sbjct: 274 SVQDMRGRPALSGLI 288
>gi|114566101|ref|YP_753255.1| stage III sporulation protein spoIIIAA [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
gi|114337036|gb|ABI67884.1| stage III sporulation protein spoIIIAA [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
Length = 313
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 11/132 (8%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK----RVVIVDTSNEIGGDGDIPHSAIG---TAR 65
L + P GKTT++R+IAR +S + I+D +EI G H +
Sbjct: 159 LIISPPRCGKTTILRDIARSISTGSSACPPHNIAIIDERSEIAGT----HRGLAQLDVGI 214
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + + M+ A+ + P+V+I DEIG + + A + GV +I + H LE
Sbjct: 215 RSDVLDACPKSWGMMMAIRSLSPQVLIADEIGRKEDVEALQECVNAGVAVICSIHARNLE 274
Query: 126 NIIKNPILSDLI 137
+ K P++ L+
Sbjct: 275 ELSKRPLIKKLL 286
>gi|315646315|ref|ZP_07899435.1| stage III sporulation protein AA [Paenibacillus vortex V453]
gi|315278514|gb|EFU41830.1| stage III sporulation protein AA [Paenibacillus vortex V453]
Length = 332
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 70/135 (51%), Gaps = 12/135 (8%)
Query: 13 LFVGRPGVGKTTVMREIARVLS-DEFQKRVV--------IVDTSNEIGGD-GDIPHSAIG 62
L + P GKTT++R++AR +S ++ K V IVD +EI G +P +G
Sbjct: 156 LILSPPQQGKTTLLRDLARQISHGKWGKSAVHWPGMKVGIVDERSEIAGCLRGVPGFDVG 215
Query: 63 TARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 122
R V + + + M+ + + P+V+IVDEIG +A A G+ +I TAHG
Sbjct: 216 P--RTDVLDGCPKAEGMMMMIRSMSPDVLIVDEIGRPEDAEAVIEALHAGISVIATAHGS 273
Query: 123 WLENIIKNPILSDLI 137
++++ P LS L+
Sbjct: 274 SVQDMRGRPALSGLL 288
>gi|326201942|ref|ZP_08191812.1| stage III sporulation protein AA [Clostridium papyrosolvens DSM
2782]
gi|325987737|gb|EGD48563.1| stage III sporulation protein AA [Clostridium papyrosolvens DSM
2782]
Length = 323
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGDGD-IPHSAIGTAR 65
L VG P GKTT++R+++R+LS Q+ +V IVD +EI +P + +G
Sbjct: 158 LIVGPPQCGKTTILRDLSRMLSSGEQEYDFNGMKVGIVDERSEIAACCKGVPQNDVGYRT 217
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 121
+ P + M+ + + P +II DEIGT + A + G+ +I +AHG
Sbjct: 218 DVMDGCPKVLGMEML--LRSMSPGIIITDEIGTHGDRDAVLKVLNSGIKIIASAHG 271
>gi|366166835|ref|ZP_09466590.1| stage III sporulation protein AA [Acetivibrio cellulolyticus CD2]
Length = 340
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 56/117 (47%), Gaps = 11/117 (9%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGG--DGDIPHSAIGTA 64
L V P GKTT++R++AR LSD +V +VD +EI G P +G
Sbjct: 171 LIVSPPKCGKTTILRDLARNLSDGVDGFAIRGLKVGVVDERSEIAACFKGS-PQKEVGA- 228
Query: 65 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 121
R V + + M + + P+VII DEIG + A + GV +I TAHG
Sbjct: 229 -RTDVLDACPKQLGMSMMLRSMSPDVIITDEIGCNGDKEALMQVLNAGVKIITTAHG 284
>gi|238924594|ref|YP_002938110.1| stage III sporulation protein AA [Eubacterium rectale ATCC 33656]
gi|238876269|gb|ACR75976.1| stage III sporulation protein AA [Eubacterium rectale ATCC 33656]
Length = 313
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQKR----VVIVDTSNEIGGDG-DIPHSAIGTARRM 67
L + RPG GKTT +R+ R+LSD + V +VD +EI + + IG + +
Sbjct: 136 LVISRPGEGKTTFLRDCIRILSDGCDGKNALKVSVVDERSEIAACYLGVAQNDIGNSSDV 195
Query: 68 QVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 126
P SL ++++ ++ P+VI VDE+G E + A + G+ ++G+ HG ++
Sbjct: 196 LDNCPKSLGMRMLLRSMS---PDVIAVDELGGEGDIEALNQLVSCGIRILGSVHGTNADD 252
Query: 127 I 127
+
Sbjct: 253 L 253
>gi|452992565|emb|CCQ95992.1| Stage III sporulation protein AA [Clostridium ultunense Esp]
Length = 324
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 2 VYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGG-DG 54
+ D H L V P GKTT++R++ R+LS+ + +V ++D +E+ G
Sbjct: 151 IIDFSHTIYDTLIVSPPQCGKTTILRDLIRILSNGSKDLGGKGMKVGVIDERSELAGMYN 210
Query: 55 DIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVM 114
+P IG R V + + I + P+++ +DEIG+ + A + GV
Sbjct: 211 GMPQFDIGL--RTDVLDGCNKKDGTIMLIRAMSPDIVAMDEIGSINDVDAIHEALKAGVK 268
Query: 115 LIGTAHGEWLENIIKNPILSDLI 137
+I T HG LE+++ L LI
Sbjct: 269 IIATIHGSTLEDLVSKKSLRMLI 291
>gi|28211253|ref|NP_782197.1| stage III sporulation protein AA [Clostridium tetani E88]
gi|28203693|gb|AAO36134.1| stage III sporulation protein AA [Clostridium tetani E88]
Length = 303
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 9/122 (7%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ + P GKTT++R+IA+ LS+ K +V ++D +EI +P +G
Sbjct: 141 IIISPPNCGKTTLLRDIAKKLSNGISKLDLKGMKVCVIDERSEIASCVNGVPQLNLGL-- 198
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + + + ++ A+ + P+VI+ DEIG+ + + GV LI T HG ++
Sbjct: 199 RTDVLDSCPKSQGIMMAIRSMSPDVIVCDEIGSTEDIESIIKAMNSGVKLITTVHGYDVK 258
Query: 126 NI 127
+I
Sbjct: 259 DI 260
>gi|338812834|ref|ZP_08624987.1| stage III sporulation protein AA [Acetonema longum DSM 6540]
gi|337275133|gb|EGO63617.1| stage III sporulation protein AA [Acetonema longum DSM 6540]
Length = 336
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
L + P GKTTV+R++ R LS + +V +VD +EI +P +G
Sbjct: 164 LIISPPRCGKTTVLRDLTRQLSSGVSQYGFAGVQVGLVDERSEIAACYQGVPTVEVGP-- 221
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ + + + M+ + + P+VI+ DE+G+E + A GV +I + HG+
Sbjct: 222 RVDILDGCPKAIGMLMLIRSMSPQVIVTDELGSEEDVRAVNEALHAGVSVIASIHGQNAT 281
Query: 126 NIIKNPILSDLI 137
+I+ P S+LI
Sbjct: 282 DILHRPCSSELI 293
>gi|291562681|emb|CBL41497.1| stage III sporulation protein AA [butyrate-producing bacterium
SS3/4]
Length = 323
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 7/129 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDE----FQKRVVIVDTSNEIGGD-GDIPHSAIGTARRM 67
L + PG GKTT++R++ R LS K V +VD +EI G I +G R
Sbjct: 161 LLISPPGAGKTTLLRDLIRELSCGGTWGAGKNVSVVDERSEIAACFGGIAQCDLGP--RT 218
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
V + + + M+ + + P+V+ VDE G E E A + G ++ T HG + +I
Sbjct: 219 DVMDGCPKSEGMLMMLRSMAPQVLAVDEAGGEGEILAMKYGMNCGCRILATVHGADVGDI 278
Query: 128 IKNPILSDL 136
+K P +L
Sbjct: 279 MKRPAWREL 287
>gi|390453349|ref|ZP_10238877.1| stage III sporulation protein AA [Paenibacillus peoriae KCTC 3763]
Length = 331
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLS---------DEFQKRVVIVDTSNEIGGD-GDIPHS 59
+ L + P GKTT++R++AR LS +V I+D +EI G IP
Sbjct: 151 RHTLILSPPQHGKTTLLRDLARQLSYGGVGSNGGRRSGLKVGIIDERSEIAGSHKGIPGF 210
Query: 60 AIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 119
+G R V + + + M+ + + P+V+IVDEIG +A A R G+ +I +A
Sbjct: 211 DVGP--RTDVLDGCPKAEGMMMMIRSMSPDVLIVDEIGRPEDAEAVREALHAGIAVIASA 268
Query: 120 HGEWLENIIKNPILSDLIGGVDTVTL 145
HG + + L+ L G + L
Sbjct: 269 HGRDVAEMATRSALAGLTAGQELFQL 294
>gi|376261518|ref|YP_005148238.1| stage III sporulation protein AA [Clostridium sp. BNL1100]
gi|373945512|gb|AEY66433.1| stage III sporulation protein AA [Clostridium sp. BNL1100]
Length = 323
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 9/116 (7%)
Query: 13 LFVGRPGVGKTTVMREIARVLS------DEFQKRVVIVDTSNEIGGDGD-IPHSAIGTAR 65
L VG P GKTT++R+++R+LS D +V IVD +EI +P S +G
Sbjct: 158 LIVGPPQCGKTTILRDLSRMLSSGEAEYDFNGMKVGIVDERSEIAACCKGVPQSDVGYRT 217
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 121
+ P + M+ + + P +II DEIGT + A + G+ +I +AHG
Sbjct: 218 DVLDGCPKVLGMEML--LRSMSPGIIITDEIGTHGDRDAILKVLNSGIKIIASAHG 271
>gi|375309142|ref|ZP_09774423.1| stage III sporulation protein AA [Paenibacillus sp. Aloe-11]
gi|375078451|gb|EHS56678.1| stage III sporulation protein AA [Paenibacillus sp. Aloe-11]
Length = 331
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLS---------DEFQKRVVIVDTSNEIGGD-GDIPHS 59
+ L + P GKTT++R++AR LS +V I+D +EI G IP
Sbjct: 151 RHTLILSPPQHGKTTLLRDLARQLSYGGVGSNGGRRSGLKVGIIDERSEIAGSHKGIPGF 210
Query: 60 AIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 119
+G R V + + + M+ + + P+V+IVDEIG +A A R G+ +I +A
Sbjct: 211 DVGP--RTDVLDGCPKAEGMMMMIRSMSPDVLIVDEIGRPEDAEAVREALHAGIAVIASA 268
Query: 120 HGEWLENIIKNPILSDLIGGVDTVTL 145
HG + + L+ L G + L
Sbjct: 269 HGRDVAEMATRSALAGLTAGQELFQL 294
>gi|261405938|ref|YP_003242179.1| stage III sporulation protein AA [Paenibacillus sp. Y412MC10]
gi|261282401|gb|ACX64372.1| stage III sporulation protein AA [Paenibacillus sp. Y412MC10]
Length = 332
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 16/137 (11%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK-----------RVVIVDTSNEIGGD-GDIPHSA 60
L + P GKTT++R++AR +S + K +V I+D +EI G +P
Sbjct: 156 LILSPPQQGKTTLLRDLARQIS--YGKWGNSSVHWPGMKVGIIDERSEIAGCLRGVPGFD 213
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
+G R V + + + M+ + + P+V+IVDEIG +A A G+ +I TAH
Sbjct: 214 VGP--RTDVMDGCPKAEGMMMMIRSMSPDVLIVDEIGRPEDAEAVIEALHAGISVIATAH 271
Query: 121 GEWLENIIKNPILSDLI 137
G ++++ P LS L+
Sbjct: 272 GSSVQDMRGRPALSGLL 288
>gi|329924766|ref|ZP_08279755.1| stage III sporulation protein AA [Paenibacillus sp. HGF5]
gi|328940431|gb|EGG36754.1| stage III sporulation protein AA [Paenibacillus sp. HGF5]
Length = 332
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 16/137 (11%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK-----------RVVIVDTSNEIGGD-GDIPHSA 60
L + P GKTT++R++AR +S + K +V I+D +EI G +P
Sbjct: 156 LILSPPQQGKTTLLRDLARQIS--YGKWGNSSVHWPGMKVGIIDERSEIAGCLRGVPGFD 213
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
+G R V + + + M+ + + P+V+IVDEIG +A A G+ +I TAH
Sbjct: 214 VGP--RTDVMDGCPKAEGMMMMIRSMSPDVLIVDEIGRPEDAEAVIEALHAGISVIATAH 271
Query: 121 GEWLENIIKNPILSDLI 137
G ++++ P LS L+
Sbjct: 272 GSSVQDMRGRPALSGLL 288
>gi|310642679|ref|YP_003947437.1| stage III sporulation protein aa [Paenibacillus polymyxa SC2]
gi|386041735|ref|YP_005960689.1| stage III sporulation protein AA [Paenibacillus polymyxa M1]
gi|309247629|gb|ADO57196.1| Stage III sporulation protein AA [Paenibacillus polymyxa SC2]
gi|343097773|emb|CCC85982.1| stage III sporulation protein AA [Paenibacillus polymyxa M1]
Length = 331
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLSDEFQK---------RVVIVDTSNEIGGD-GDIPHS 59
+ L + P GKTT++R++AR LS K +V I+D +EI G IP
Sbjct: 151 RHTLILSPPQHGKTTLLRDLARQLSYGGMKSNGGRRNGLKVGIIDERSEIAGSHKGIPGF 210
Query: 60 AIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 119
+G R + + + + M+ + + P+V+IVDEIG +A A R G+ +I +A
Sbjct: 211 DVGP--RTDILDGCPKAEGMMMMIRSMSPDVLIVDEIGRPEDAEAVREALHAGIAVIASA 268
Query: 120 HGEWLENIIKNPILSDLIGGVDTVTL 145
HG + + + L G + L
Sbjct: 269 HGRDVAEMASRSAFAGLATGQELFQL 294
>gi|346722887|ref|YP_001180908.2| AAA ATPase [Caldicellulosiruptor saccharolyticus DSM 8903]
gi|345106858|gb|ABP67717.2| AAA ATPase [Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 248
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 70/134 (52%), Gaps = 12/134 (8%)
Query: 5 LLHYGKSI---LFVGRPGVGKTTVMREIARVLSD-----EFQK-RVVIVDTSNEIGGDGD 55
+L+ KSI L V PG GKTT++R+I R+LS+ F RVV++D +EI
Sbjct: 81 ILNPSKSIYNTLIVSPPGCGKTTLLRDIVRILSNGEINLSFGGFRVVVIDERSEISTYSQ 140
Query: 56 IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVML 115
S +GT R V + + + A+ + P++I +DE+G + A ++ GV +
Sbjct: 141 -EQSKLGT--RTFVLDGVDKLNGVFMAIRSLNPQIIAMDELGGPQDYLAVAEASKMGVKV 197
Query: 116 IGTAHGEWLENIIK 129
I T HGE L + K
Sbjct: 198 IATMHGENLHELKK 211
>gi|225375604|ref|ZP_03752825.1| hypothetical protein ROSEINA2194_01229 [Roseburia inulinivorans DSM
16841]
gi|225212583|gb|EEG94937.1| hypothetical protein ROSEINA2194_01229 [Roseburia inulinivorans DSM
16841]
Length = 309
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDE----FQKRVVIVDTSNEIGGDG-DIPHSAIGTAR 65
+ L + PG GKTT++R+ R LS+ + +V +VD +EI +P + +G
Sbjct: 147 NTLILSMPGAGKTTLLRDSIRALSNGEAYGIRLKVCVVDERSEIAASFHGVPQNDMGP-- 204
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + + + M + + P++I VDE+G E++ +A G ++GT H ++
Sbjct: 205 RTDVMDGCGKAEGMQLLIRSMSPQIIAVDELGAESDFYAVEQALNCGSRVLGTIHAGNMK 264
Query: 126 NIIKNPIL 133
+ + P L
Sbjct: 265 ELSEKPYL 272
>gi|205374061|ref|ZP_03226861.1| mutants block sporulation after engulfment [Bacillus coahuilensis
m4-4]
Length = 294
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 66/124 (53%), Gaps = 8/124 (6%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLSDEFQK-----RVVIVDTSNEIGGD-GDIPHSAIGT 63
K + +G P GKTT++R++AR +S + +V IVD +EI G +P +G
Sbjct: 137 KHTMIIGPPQSGKTTLLRDLARFVSSGNGQGIPSFKVGIVDERSEIAGCVKGVPQLELGN 196
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 123
R+ V + + + M+ + + P+V++VDEIG + + A GV L+ + HG
Sbjct: 197 --RVDVLDGCPKVEGMMMLIRSMSPDVLVVDEIGRKEDGDAILEAVNAGVTLMMSIHGSS 254
Query: 124 LENI 127
L+++
Sbjct: 255 LQDV 258
>gi|154502445|ref|ZP_02039505.1| hypothetical protein RUMGNA_00258 [Ruminococcus gnavus ATCC 29149]
gi|336434239|ref|ZP_08614039.1| stage III sporulation protein AA [Lachnospiraceae bacterium
2_1_58FAA]
gi|153796841|gb|EDN79261.1| stage III sporulation protein AA [Ruminococcus gnavus ATCC 29149]
gi|336014282|gb|EGN44138.1| stage III sporulation protein AA [Lachnospiraceae bacterium
2_1_58FAA]
Length = 313
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 7/130 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK----RVVIVDTSNEIGGDG-DIPHSAIGTARRM 67
L + P GKTT++R++ R +SD V +VD +EIGG + + +G+ R
Sbjct: 152 LVISPPCGGKTTLIRDLIRQISDGNAHVKGCTVGVVDERSEIGGCYLGVAQNHLGS--RT 209
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
+ + + + MI + + P V+ VDEIG + E A + G LI + HG + I
Sbjct: 210 DILDCCPKAEGMIMLIRSMSPRVLAVDEIGAQEEIRAVEYAMQCGCKLIASVHGNSMAEI 269
Query: 128 IKNPILSDLI 137
P L +L+
Sbjct: 270 ASKPGLGELV 279
>gi|302389879|ref|YP_003825700.1| stage III sporulation protein AA [Thermosediminibacter oceani DSM
16646]
gi|302200507|gb|ADL08077.1| stage III sporulation protein AA [Thermosediminibacter oceani DSM
16646]
Length = 341
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 9/128 (7%)
Query: 18 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGDGD-IPHSAIGTARRMQVP 70
P GKTT++R++ R LS + +V +VD +EI + +P + +G R V
Sbjct: 172 PKAGKTTLLRDLIRQLSSGNPRLGLKGFKVGVVDERSEIACCYEGVPQNDVGI--RTDVL 229
Query: 71 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 130
+ + + ++ + + P++I DEIG + A GV L+ TAHG LE++ +
Sbjct: 230 DGCPKARGIMMLLRSMSPDIIATDEIGRTEDVEAMEEALNAGVKLLTTAHGADLEDVGRR 289
Query: 131 PILSDLIG 138
P L LIG
Sbjct: 290 PTLRKLIG 297
>gi|334137167|ref|ZP_08510612.1| stage III sporulation protein AA [Paenibacillus sp. HGF7]
gi|333605365|gb|EGL16734.1| stage III sporulation protein AA [Paenibacillus sp. HGF7]
Length = 397
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 64/126 (50%), Gaps = 9/126 (7%)
Query: 19 GVGKTTVMREIARVLS--DEFQKR----VVIVDTSNEIGG-DGDIPHSAIGTARRMQVPE 71
G G RE AR S D Q+R V IVD +EI + +P +G R V +
Sbjct: 216 GSGLEAGSREPARRPSAPDRPQRRAGWKVGIVDERSEIAASERGVPRFDLGP--RTDVLD 273
Query: 72 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 131
+ + M+ + + PEV+IVDEIG +A A R G+ +I TAHG L ++ + P
Sbjct: 274 ACPKAEGMMMMIRSMSPEVLIVDEIGRHEDAEAIREALHAGIRIIATAHGRDLGDVKRRP 333
Query: 132 ILSDLI 137
+L +L+
Sbjct: 334 VLRELL 339
>gi|333897006|ref|YP_004470880.1| stage III sporulation protein AA [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333112271|gb|AEF17208.1| stage III sporulation protein AA [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 334
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 9/134 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
L + P GKTT++R+IAR +S+ + +V IVD +EI IP + +G
Sbjct: 161 LIISPPQCGKTTLIRDIARNISNGMPELNFHGEKVSIVDERSEIAACFKGIPQNDVGY-- 218
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + +H ++ + + P+VII DEIG + + GV +I T HG +E
Sbjct: 219 RTDVLDLCPKHIGILMMIRSMSPKVIITDEIGKVEDIASIHEALNAGVSIITTVHGNDVE 278
Query: 126 NIIKNPILSDLIGG 139
++ + + +++
Sbjct: 279 DVARKKYIDEMLNN 292
>gi|296133231|ref|YP_003640478.1| stage III sporulation protein AA [Thermincola potens JR]
gi|296031809|gb|ADG82577.1| stage III sporulation protein AA [Thermincola potens JR]
Length = 325
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQKR------VVIVDTSNEIGGDG-DIPHSAIGTAR 65
L + P GKTT++R+I R LS+ V +VD +EI G +P +G
Sbjct: 162 LIISPPRCGKTTLLRDIVRQLSNGVPSLGFHGVPVGVVDERSEIAGCFRGVPQKDVGI-- 219
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + + + MI + + P+V+ DEIG + + A + G+ ++ T HG +
Sbjct: 220 RTDVLDGCPKAEGMIMLIRSMAPKVVATDEIGRKEDIFALEEVLNAGIKILTTVHGANMS 279
Query: 126 NIIKNPILSDLI 137
+++ P L L+
Sbjct: 280 ELVQRPALKYLV 291
>gi|121534513|ref|ZP_01666336.1| AAA ATPase [Thermosinus carboxydivorans Nor1]
gi|121307006|gb|EAX47925.1| AAA ATPase [Thermosinus carboxydivorans Nor1]
Length = 349
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 68/134 (50%), Gaps = 9/134 (6%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGT 63
S L + P GKTT++R+I R LS ++ +V +VD +EI +P +G
Sbjct: 175 STLLISPPRCGKTTLLRDIIRQLSSGVRQLNFSGVQVGLVDERSEIAACVSGVPTMDLGP 234
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 123
R+ V + + ++ + + P+V++ DE+G +A A + GV+++ T HG
Sbjct: 235 --RVDVLDGCPKASGLLMLLRSMAPQVLVTDELGRGEDAAAIQEALHAGVVVVATVHGRD 292
Query: 124 LENIIKNPILSDLI 137
+ I + P + +LI
Sbjct: 293 IAGIAQRPYVGELI 306
>gi|435853281|ref|YP_007314600.1| stage III sporulation protein AA [Halobacteroides halobius DSM
5150]
gi|433669692|gb|AGB40507.1| stage III sporulation protein AA [Halobacteroides halobius DSM
5150]
Length = 317
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 65/132 (49%), Gaps = 12/132 (9%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK-----RVVIVDTSNEIGGD-GDIPHSAIGTARR 66
L + P GKTT++R++ R +S+ K +V +VD +EIGG + + IG
Sbjct: 163 LIISPPRCGKTTLLRDLVRQISNGIPKQFNGLKVGVVDERSEIGGAYQGVAQNQIGIRTD 222
Query: 67 M--QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 124
+ + P+P + ++ + + P VI+ DEIGT+ + GV +I T HG L
Sbjct: 223 LLDRAPKP----EGILLLIRSMSPNVIVTDEIGTKEDVDILLEALNAGVRVITTVHGSNL 278
Query: 125 ENIIKNPILSDL 136
+ P L+ L
Sbjct: 279 AEVKSRPSLAKL 290
>gi|421860480|ref|ZP_16292604.1| uncharacterized protein conserved in bacteria [Paenibacillus
popilliae ATCC 14706]
gi|410829962|dbj|GAC43041.1| uncharacterized protein conserved in bacteria [Paenibacillus
popilliae ATCC 14706]
Length = 320
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 13/148 (8%)
Query: 1 MVYDLLH-YGKSILFVGRPGVGKTTVMREIARVLSDEF---------QKRVVIVDTSNEI 50
M+ D H + L V P GKTT++R++ R + +V +VD +EI
Sbjct: 132 MLLDFKHAHIHHTLIVSPPQQGKTTLLRDLVRAIGSGLWHHPEARWKALKVGVVDERSEI 191
Query: 51 GGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIA 109
G +P +G R V + + + M+ + + P+V+ VDE G E + A
Sbjct: 192 AGCIKGVPSYDLGY--RTDVLDGCPKAEGMMMFIRSMSPDVLAVDETGREEDLLAMSEAM 249
Query: 110 ERGVMLIGTAHGEWLENIIKNPILSDLI 137
GV LI TAH E ++++++ P L L+
Sbjct: 250 HAGVRLIATAHAEDMDDLLRRPGLRQLL 277
>gi|373115236|ref|ZP_09529412.1| stage III sporulation protein AA [Lachnospiraceae bacterium
7_1_58FAA]
gi|371670528|gb|EHO35607.1| stage III sporulation protein AA [Lachnospiraceae bacterium
7_1_58FAA]
Length = 305
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 8/133 (6%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLSDEFQK---RVVIVDTSNEIGG--DGDIPHSAIGTA 64
+S L + PG GKTT++R++ R +SD RV + D E+ G+ P +IG
Sbjct: 150 QSTLLLSPPGGGKTTLLRDLIRAVSDGEGGPALRVGVADERGELAAMYQGE-PQFSIG-- 206
Query: 65 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 124
R+ V + + ++ + P+V+ DEI +A A A GV L+ TAH L
Sbjct: 207 RQTDVLDGCPKGPALLMLLRGMNPQVLAADEITAPEDAAALEMAANCGVSLLCTAHAGSL 266
Query: 125 ENIIKNPILSDLI 137
E + P+ L+
Sbjct: 267 EELKARPLYRRLL 279
>gi|365842271|ref|ZP_09383300.1| putative stage III sporulation protein AA [Flavonifractor plautii
ATCC 29863]
gi|364576112|gb|EHM53459.1| putative stage III sporulation protein AA [Flavonifractor plautii
ATCC 29863]
Length = 305
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 8/133 (6%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLSDEFQK---RVVIVDTSNEIGG--DGDIPHSAIGTA 64
+S L + PG GKTT++R++ R +SD RV + D E+ G+ P +IG
Sbjct: 150 QSTLLLSPPGGGKTTLLRDLIRAVSDGEGGPALRVGVADERGELAAMYQGE-PQFSIG-- 206
Query: 65 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 124
R+ V + + ++ + P+V+ DEI +A A A GV L+ TAH L
Sbjct: 207 RQTDVLDGCPKGPALLMLLRGMNPQVLAADEITAPEDAAALEMAANCGVSLLCTAHAGSL 266
Query: 125 ENIIKNPILSDLI 137
E + P+ L+
Sbjct: 267 EELKARPLYRRLL 279
>gi|134298920|ref|YP_001112416.1| hypothetical protein Dred_1056 [Desulfotomaculum reducens MI-1]
gi|134051620|gb|ABO49591.1| conserved hypothetical protein [Desulfotomaculum reducens MI-1]
Length = 337
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ V P GKTT++REI R LS+ + V +VD +EI G +P IG
Sbjct: 171 ILVSPPRCGKTTMLREIIRRLSEGVPELGFSGVTVGVVDERSEIAGCYRGVPQRDIGP-- 228
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + + M+ + + P +I DEIG + + A + GV ++ T HG LE
Sbjct: 229 RTDVLDACPKAPGMMMLLRSMGPMIIATDEIGRQEDVAALEEVLNAGVKVLSTVHGATLE 288
Query: 126 NIIKNPILSDLI 137
+ P L L
Sbjct: 289 ELADRPALQYLF 300
>gi|167770749|ref|ZP_02442802.1| hypothetical protein ANACOL_02095 [Anaerotruncus colihominis DSM
17241]
gi|167667344|gb|EDS11474.1| putative stage III sporulation protein AA [Anaerotruncus
colihominis DSM 17241]
Length = 318
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 6/131 (4%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDE---FQKRVVIVDTSNEIGGD-GDIPHSAIGTARR 66
+L G P GKTT++R++AR LS ++V +VD S EIG G + + +G
Sbjct: 157 GLLLAGAPASGKTTLLRDLARQLSSGTPGVYRKVCVVDESGEIGASSGGLIQNDLGPCCD 216
Query: 67 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 126
+ P + K + A+ PE+II DEI TEAE A + GV ++ + H E
Sbjct: 217 LLAGYP--KAKGLQIAIRYLSPEIIICDEIATEAEIEAVAAAVNSGVAVVTSVHAASFEE 274
Query: 127 IIKNPILSDLI 137
+ + ++ L
Sbjct: 275 LYRKRMIGRLF 285
>gi|392426588|ref|YP_006467582.1| stage III sporulation protein AA [Desulfosporosinus acidiphilus
SJ4]
gi|391356551|gb|AFM42250.1| stage III sporulation protein AA [Desulfosporosinus acidiphilus
SJ4]
Length = 340
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGG-DGDIPHSAIGTAR 65
L + P GKTT++R++ R++S+ + V ++D E+ G + +P +G
Sbjct: 179 LVISAPRAGKTTLLRDLIRLISNGVPQMGLEGQSVGVIDERGELAGMNKGLPSYNLGCRT 238
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
+ P + M+ + + P+V+++DE+G E A + GV ++ TAH LE
Sbjct: 239 DVLDGCPKVYGMTML--IRSMAPQVVVMDELGHHDEIEALKDALRTGVRILCTAHASSLE 296
Query: 126 NIIKNPILSDLI 137
P LS L+
Sbjct: 297 EAKTRPTLSYLL 308
>gi|407473829|ref|YP_006788229.1| stage III sporulation protein AA [Clostridium acidurici 9a]
gi|407050337|gb|AFS78382.1| stage III sporulation protein AA [Clostridium acidurici 9a]
Length = 326
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 11/133 (8%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGG--DGDIPHSAIGTA 64
L + P GKTT++R++ R +S+ +V +VD +E+ G +G P + +G
Sbjct: 163 LIISPPKCGKTTILRDLIRNISNGINSYNFEGLKVGVVDERSELAGTYNGQ-PQNDLG-- 219
Query: 65 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 124
R + + +H ++ + P+VI DE+G + A + GV +I T HG L
Sbjct: 220 YRTDILDGCYKHDGIMILLRAMSPDVIATDELGHPNDIKAIYEAMKGGVQIISTVHGANL 279
Query: 125 ENIIKNPILSDLI 137
+++ P + D++
Sbjct: 280 DDVKNKPNIKDIV 292
>gi|397906464|ref|ZP_10507264.1| Stage III sporulation protein AA [Caloramator australicus RC3]
gi|397160421|emb|CCJ34601.1| Stage III sporulation protein AA [Caloramator australicus RC3]
Length = 311
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 60/125 (48%), Gaps = 9/125 (7%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGG-DGDIPHSAIG 62
K L + PG GKTT++R+I R LSD ++ R+ +VD EI +P +G
Sbjct: 152 KHTLIISPPGCGKTTLLRDIIRNLSDGNKRLNVRGYRIGVVDERGEIAACHQGVPQLDVG 211
Query: 63 TARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 122
R V + + + + + PE+I VDEIG + A + + GV +I TAH
Sbjct: 212 L--RTDVLDSCPKTLGIYMLLRSMGPEIIAVDEIGGLDDTKAIQDALKAGVKIIATAHAG 269
Query: 123 WLENI 127
+ I
Sbjct: 270 TFDEI 274
>gi|253576304|ref|ZP_04853634.1| stage III sporulation protein AA [Paenibacillus sp. oral taxon 786
str. D14]
gi|251844197|gb|EES72215.1| stage III sporulation protein AA [Paenibacillus sp. oral taxon 786
str. D14]
Length = 343
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 12/134 (8%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK---------RVVIVDTSNEIGGDG-DIPHSAIG 62
L + P GKTT++R++AR +S +V ++D +EI G +P +G
Sbjct: 167 LILSPPQQGKTTLIRDLARQISSGTWGHPEASWPGLKVAVIDERSEIAGSKRGVPGFDMG 226
Query: 63 TARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 122
R V + + + ++ + + P+VIIVDEIG +A A GV +I TAHG
Sbjct: 227 P--RTDVMDGCPKAEGIMMMIRSMSPDVIIVDEIGRPEDAEALAEALHAGVRVIATAHGS 284
Query: 123 WLENIIKNPILSDL 136
++++ P LS L
Sbjct: 285 SVDDLAARPALSRL 298
>gi|357038632|ref|ZP_09100429.1| stage III sporulation protein AA [Desulfotomaculum gibsoniae DSM
7213]
gi|355359424|gb|EHG07186.1| stage III sporulation protein AA [Desulfotomaculum gibsoniae DSM
7213]
Length = 350
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 9/127 (7%)
Query: 18 PGVGKTTVMREIARVLSD-----EFQKRVV-IVDTSNEIGG-DGDIPHSAIGTARRMQVP 70
P GKTT++R++ R +S+ F R V +VD +EI G +P +G R V
Sbjct: 187 PRCGKTTLLRDLVRQVSNGVPGLHFAGRTVGVVDERSEIAGCHRGVPQMDVGV--RTDVL 244
Query: 71 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 130
+ + + M+ + P+VI+ DEIG + HA + GV +I T HG L +
Sbjct: 245 DGCPKAQGMMILLRAMSPDVIVTDEIGRMEDIHALEEVFNAGVRVIVTIHGSSLRELTNR 304
Query: 131 PILSDLI 137
P L ++
Sbjct: 305 PALKYML 311
>gi|258515805|ref|YP_003192027.1| stage III sporulation protein AA [Desulfotomaculum acetoxidans DSM
771]
gi|257779510|gb|ACV63404.1| stage III sporulation protein AA [Desulfotomaculum acetoxidans DSM
771]
Length = 345
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 9/135 (6%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLSD-----EFQKRVV-IVDTSNEIGGDG-DIPHSAIG 62
K L V P GKTT++R++ R +S+ F V +VD +E+ G +P +G
Sbjct: 176 KHTLLVSPPRCGKTTLLRDLVRQISNGIPSLSFPGTTVGLVDERSELAGCYYGLPQKDVG 235
Query: 63 TARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 122
R V + + + MI + P+VI DEIG + A + GV +I T H
Sbjct: 236 L--RTDVLDACPKAEGMIMLLRAMSPQVIATDEIGRAEDVRALEEVFHAGVKVITTVHAA 293
Query: 123 WLENIIKNPILSDLI 137
++ +I+ P L L+
Sbjct: 294 SIKELIQRPALKYLL 308
>gi|154498058|ref|ZP_02036436.1| hypothetical protein BACCAP_02039 [Bacteroides capillosus ATCC
29799]
gi|150273048|gb|EDN00205.1| putative stage III sporulation protein AA [Pseudoflavonifractor
capillosus ATCC 29799]
Length = 314
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 8/133 (6%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLSDE---FQKRVVIVDTSNEIGG--DGDIPHSAIGTA 64
+S L + PG GKTT++R+I R +SD RV I D E+ DG +P +G
Sbjct: 154 QSTLILSPPGGGKTTLLRDIIRAVSDGDGVTPMRVGIADERGELAAMYDG-LPQLDVG-- 210
Query: 65 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 124
RR V + + ++ + P+V+ DEI A+ A + A GV L+ TAH
Sbjct: 211 RRTDVLDGCPKGTALLMLLRGMNPQVLAADEITAPADCAALEAAANCGVTLLATAHASGT 270
Query: 125 ENIIKNPILSDLI 137
E++ P+ L+
Sbjct: 271 EDLSSRPLYRRLL 283
>gi|268608458|ref|ZP_06142185.1| stage III sporulation protein AA [Ruminococcus flavefaciens FD-1]
Length = 330
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 63/131 (48%), Gaps = 7/131 (5%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGG--DGDIPHSAIGTARR 66
G+S++ G GKTT++R++ R+ + + ++D+ NEI G P + +G
Sbjct: 146 GRSLIICGAVNSGKTTILRDLCRLYGNAV--KCTLIDSRNEIAAVIKGK-PANDVGMLTD 202
Query: 67 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 126
+ + +H +I AV P I DEI ++ A R GV I T H + +E
Sbjct: 203 IITGKS--RHDGIISAVRTLSPGYIFCDEIADSSDTEAIREGIGCGVKFIATIHADSVEE 260
Query: 127 IIKNPILSDLI 137
+++ ++ L+
Sbjct: 261 LLRRSVVRTLL 271
>gi|323702758|ref|ZP_08114418.1| stage III sporulation protein AA [Desulfotomaculum nigrificans DSM
574]
gi|323532275|gb|EGB22154.1| stage III sporulation protein AA [Desulfotomaculum nigrificans DSM
574]
Length = 323
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 61/132 (46%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ V P GKTT++R++ R LS+ + V +VD +EI G +P IG
Sbjct: 157 MLVSPPRCGKTTLLRDLVRRLSEGVPELGLPGMTVGVVDERSEIAGCYRGVPQRDIGP-- 214
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + + M+ + + P+VI DEIG + A + GV ++ T HG LE
Sbjct: 215 RTDVLDACPKAAGMMMLLRSMGPQVIATDEIGRPEDIAALEEMVNAGVKVLTTVHGASLE 274
Query: 126 NIIKNPILSDLI 137
+ P L L
Sbjct: 275 ELTDRPALQYLF 286
>gi|333924296|ref|YP_004497876.1| stage III sporulation protein AA [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|333749857|gb|AEF94964.1| stage III sporulation protein AA [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 323
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 61/132 (46%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ V P GKTT++R++ R LS+ + V +VD +EI G +P IG
Sbjct: 157 MLVSPPRCGKTTLLRDLVRRLSEGVPELGLPGMTVGVVDERSEIAGCYRGVPQRDIGP-- 214
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + + M+ + + P+VI DEIG + A + GV ++ T HG LE
Sbjct: 215 RTDVLDACPKAAGMMMLLRSMGPQVIATDEIGRPEDIAALEEMVNAGVKVLTTVHGASLE 274
Query: 126 NIIKNPILSDLI 137
+ P L L
Sbjct: 275 ELTDRPALQYLF 286
>gi|169831169|ref|YP_001717151.1| ATPase AAA [Candidatus Desulforudis audaxviator MP104C]
gi|169638013|gb|ACA59519.1| AAA ATPase [Candidatus Desulforudis audaxviator MP104C]
Length = 332
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 9/130 (6%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGT 63
+ L + PG GKTT++R++ R S + V +VD +EI G +P +G
Sbjct: 162 NTLIISPPGCGKTTLLRDLVRQFSAGVPRLGFAGLTVGVVDERSEIAGCYRGVPQLDVGP 221
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 123
R V + + + M+ + P+VI DEIG + A + GV ++ TAH
Sbjct: 222 --RTDVLDGCPKAEGMMMLLRAFSPDVIATDEIGRREDVTALEEMLNAGVKILATAHAAS 279
Query: 124 LENIIKNPIL 133
L+ + P+L
Sbjct: 280 LDELRGRPVL 289
>gi|158320654|ref|YP_001513161.1| sporulation stage III protein AA [Alkaliphilus oremlandii OhILAs]
gi|158140853|gb|ABW19165.1| Sporulation stage III protein AA [Alkaliphilus oremlandii OhILAs]
Length = 351
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 65/132 (49%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSD-----EFQK-RVVIVDTSNEIGGDGD-IPHSAIGTAR 65
L V P GKTT++R++ R++S F+ +V +VD +E+G +P + +G
Sbjct: 179 LIVSPPQCGKTTLLRDVIRMVSTGVPHMNFRGLKVGVVDERSELGACFQGVPQNDLGPRT 238
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
+ P + +M+ + P+VI DEIG E + A G+ LI T H LE
Sbjct: 239 DILDSCPKAEGIMML--IRAMSPQVIATDEIGREEDMIAIDEAIMAGIKLITTVHSRSLE 296
Query: 126 NIIKNPILSDLI 137
NI+ ++ L+
Sbjct: 297 NILSKRVVGKLV 308
>gi|171185782|ref|YP_001794701.1| type II secretion system protein E [Pyrobaculum neutrophilum
V24Sta]
gi|170934994|gb|ACB40255.1| type II secretion system protein E [Pyrobaculum neutrophilum
V24Sta]
Length = 342
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 12/128 (9%)
Query: 2 VYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAI 61
+Y + GK I+ G PG GKTT++ + ++ Q+ V +D ++E D D I
Sbjct: 193 IYRYVREGKHIVVTGPPGSGKTTLLVALDDIIPPNLQR--VYIDEADEFEEDPDKNQIKI 250
Query: 62 GTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 121
+M+ SL + +VI V E+ E HA R+ E G+ + T H
Sbjct: 251 HNVNKMREVYASLNRNI----------DVIFVGELQYEDHFHAFRTATEMGIQTLATMHS 300
Query: 122 EWLENIIK 129
+E ++
Sbjct: 301 TSVEGALR 308
>gi|334341607|ref|YP_004546587.1| stage III sporulation protein AA [Desulfotomaculum ruminis DSM
2154]
gi|334092961|gb|AEG61301.1| stage III sporulation protein AA [Desulfotomaculum ruminis DSM
2154]
Length = 337
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ V P GKTT++R++ R LS+ + V +VD +EI G +P +G
Sbjct: 171 MLVSPPRCGKTTLLRDLIRRLSEGVPELAFPGVNVGVVDERSEIAGCYRGVPQRDVGP-- 228
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + + M+ + + P VI DEIG + + A + GV ++ T HG LE
Sbjct: 229 RTDVLDACPKAAGMMMLLRSMGPVVIATDEIGRQEDVAALEEVLNAGVKVLTTVHGSSLE 288
Query: 126 NIIKNPILSDLI 137
+ P L L
Sbjct: 289 ELADRPALQYLF 300
>gi|339629557|ref|YP_004721200.1| hypothetical protein TPY_3305 [Sulfobacillus acidophilus TPY]
gi|379007324|ref|YP_005256775.1| hypothetical protein [Sulfobacillus acidophilus DSM 10332]
gi|339287346|gb|AEJ41457.1| hypothetical protein TPY_3305 [Sulfobacillus acidophilus TPY]
gi|361053586|gb|AEW05103.1| hypothetical protein Sulac_1606 [Sulfobacillus acidophilus DSM
10332]
Length = 292
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 2/113 (1%)
Query: 8 YGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRM 67
YG S L G P GKTT +R++ R+ S+ RVV++D EI G +
Sbjct: 141 YG-SWLLAGPPRSGKTTFLRDLIRLWSNR-GLRVVVIDERLEIAGGSQSEGFSFDVGLHT 198
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
V E + + A+ P+VI VDEIG+ E A + GV ++ T H
Sbjct: 199 DVLEAWPKLAGISVAIRTLGPDVIAVDEIGSVDELAAVSRARQAGVTVLATVH 251
>gi|222528982|ref|YP_002572864.1| ATPase AAA [Caldicellulosiruptor bescii DSM 6725]
gi|222455829|gb|ACM60091.1| AAA ATPase [Caldicellulosiruptor bescii DSM 6725]
Length = 313
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 9/121 (7%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDE------FQKRVVIVDTSNEIGGDGDIPHSAIGTARR 66
L + PG GKTT++R I R+LS RVV++D +EI + + IG R
Sbjct: 153 LIISPPGCGKTTLLRNIIRILSSGEGILAGRGLRVVVIDERSEICTENN-DKREIGI--R 209
Query: 67 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 126
V + + + ++ AV + P++I +DE+G+ ++ A ++ GV +I T H E +++
Sbjct: 210 TFVLDGVDKLRGILMAVRSLNPQIIAMDELGSPSDYLAVCEASKMGVRIIATMHAESIKD 269
Query: 127 I 127
I
Sbjct: 270 I 270
>gi|344995705|ref|YP_004798048.1| AAA ATPase [Caldicellulosiruptor lactoaceticus 6A]
gi|343963924|gb|AEM73071.1| AAA ATPase [Caldicellulosiruptor lactoaceticus 6A]
Length = 313
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 15/124 (12%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDE--------FQKRVVIVDTSNEIGG-DGDIPHSAIGT 63
L + PG GKTT++R I R+LS F RVV++D +EI D D IG
Sbjct: 153 LIISPPGCGKTTLLRNIIRILSSGEGILAGRGF--RVVVIDERSEICAVDND--RREIGI 208
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 123
R V + + + ++ AV + P++I +DE+G+ ++ A ++ GV +I T H E
Sbjct: 209 --RTFVLDGVDKLRGILMAVRSLNPQIIAMDELGSPSDYLAVCEASKMGVKIIATMHAES 266
Query: 124 LENI 127
+++I
Sbjct: 267 VKDI 270
>gi|312793180|ref|YP_004026103.1| aaa atpase [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312180320|gb|ADQ40490.1| AAA ATPase [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 313
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 15/124 (12%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDE--------FQKRVVIVDTSNEIGG-DGDIPHSAIGT 63
L + PG GKTT++R I R+LS F RVV++D +EI D D IG
Sbjct: 153 LIISPPGCGKTTLLRNIIRILSSGEGILAGRGF--RVVVIDERSEICAVDND--RREIGI 208
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 123
R V + + + ++ AV + P++I +DE+G+ ++ A ++ GV +I T H E
Sbjct: 209 --RTFVLDGVDKLRGILMAVRSLNPQIIAMDELGSPSDYLAVCEASKMGVKIIATMHAES 266
Query: 124 LENI 127
+++I
Sbjct: 267 VKDI 270
>gi|312127950|ref|YP_003992824.1| aaa atpase [Caldicellulosiruptor hydrothermalis 108]
gi|311777969|gb|ADQ07455.1| AAA ATPase [Caldicellulosiruptor hydrothermalis 108]
Length = 313
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 15/124 (12%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDE--------FQKRVVIVDTSNEIGG-DGDIPHSAIGT 63
L + PG GKTT++R I R+LS F RVV++D +EI D D IG
Sbjct: 153 LIISPPGCGKTTLLRNIIRILSSGEGILAGRGF--RVVVIDERSEICAVDND--RREIGI 208
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 123
R V + + + ++ AV + P++I +DE+G+ ++ A ++ GV +I T H E
Sbjct: 209 --RTFVLDGVDKLRGILMAVRSLNPQIIAMDELGSPSDYLAVCEASKMGVKIIATMHAES 266
Query: 124 LENI 127
+++I
Sbjct: 267 VKDI 270
>gi|167750486|ref|ZP_02422613.1| hypothetical protein EUBSIR_01462 [Eubacterium siraeum DSM 15702]
gi|167656637|gb|EDS00767.1| putative stage III sporulation protein AA [Eubacterium siraeum DSM
15702]
Length = 303
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 60/123 (48%), Gaps = 9/123 (7%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGG--DGDIPHSAIGTARRM 67
+ +L VGR GKTT++R++ R + F RV ++D EI +G P +G
Sbjct: 148 RGLLIVGRALSGKTTILRDLCRCIGGMF--RVSLIDERQEIAAVYNGK-PCLDVGLM--T 202
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
V + +I AV P+ I+ DE+G +AE + R G LI TAH + +E
Sbjct: 203 DVFSGYGKSDGIIRAVRCMSPDYIVTDELGADAE--SIRQAVNSGSGLIMTAHADSIEEA 260
Query: 128 IKN 130
+N
Sbjct: 261 YRN 263
>gi|147677501|ref|YP_001211716.1| hypothetical protein PTH_1166 [Pelotomaculum thermopropionicum SI]
gi|146273598|dbj|BAF59347.1| Uncharacterized protein conserved in bacteria [Pelotomaculum
thermopropionicum SI]
Length = 329
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 12/145 (8%)
Query: 3 YDLLHYGKSI---LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD 53
Y + +G SI + V P GKTT++R++ R +S+ V +VD +EI G
Sbjct: 150 YVIDRHGGSIYHTVLVSPPRCGKTTMLRDMVRQISNGIPALGFPGLTVGLVDERSEIAGC 209
Query: 54 -GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERG 112
+P +G R V + + + M+ + + P VI DEIG + + A + G
Sbjct: 210 YRGVPKLDVGI--RTDVLDGCPKAEGMMMLLRSMSPRVIAADEIGRQEDVDALEEVLNAG 267
Query: 113 VMLIGTAHGEWLENIIKNPILSDLI 137
V ++ TAHG L + + P L +++
Sbjct: 268 VKVLITAHGSSLAELAERPALGEVL 292
>gi|224114563|ref|XP_002316796.1| predicted protein [Populus trichocarpa]
gi|222859861|gb|EEE97408.1| predicted protein [Populus trichocarpa]
Length = 64
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 50 IGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIA 109
+GG +GT VP P +V IE VENHMP+V ++DEIGT+ EA A +IA
Sbjct: 3 LGGKPLARFQHLGTLFYRIVPSP---FRVFIEEVENHMPQVSVIDEIGTKLEAMAVSTIA 59
Query: 110 E 110
+
Sbjct: 60 Q 60
>gi|312622749|ref|YP_004024362.1| AAA atpase [Caldicellulosiruptor kronotskyensis 2002]
gi|312203216|gb|ADQ46543.1| AAA ATPase [Caldicellulosiruptor kronotskyensis 2002]
Length = 313
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDE--------FQKRVVIVDTSNEIGGDGDIPHSAIGTA 64
L + PG GKTT++R I R+LS F RVV++D +EI + IG
Sbjct: 153 LIISPPGCGKTTLLRNIIRILSSGEGILAGKGF--RVVVIDERSEICPKNN-DRREIGI- 208
Query: 65 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 124
R V + + + ++ AV + P++I +DE+G+ ++ A ++ GV +I T H E +
Sbjct: 209 -RTFVLDGVDKLRGILMAVRSLNPQIIAMDELGSPSDYLAVCEASKMGVRIIATMHAESI 267
Query: 125 ENI 127
++I
Sbjct: 268 KDI 270
>gi|291530816|emb|CBK96401.1| Uncharacterized protein conserved in bacteria [Eubacterium siraeum
70/3]
Length = 303
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 60/123 (48%), Gaps = 9/123 (7%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGG--DGDIPHSAIGTARRM 67
+ +L VGR GKTT++R++ R + F RV ++D EI +G P +G
Sbjct: 148 RGLLIVGRALSGKTTILRDLCRCIGGMF--RVSLIDERQEIAAVYNGK-PCLDVGLM--T 202
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
V + +I AV P+ I+ DE+G A+A + R G LI TAH + +E
Sbjct: 203 DVFSGYGKSDGIIRAVRCMSPDYIVTDELG--ADAKSIRQAVNSGSGLIMTAHADSIEEA 260
Query: 128 IKN 130
+N
Sbjct: 261 YRN 263
>gi|421836386|ref|ZP_16270884.1| stage III sporulation protein AA [Clostridium botulinum
CFSAN001627]
gi|409741749|gb|EKN41434.1| stage III sporulation protein AA [Clostridium botulinum
CFSAN001627]
Length = 241
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGTAR 65
+ + P GKTT++R+I++ +SD K+V ++D +EI G + +P +G
Sbjct: 141 IIISPPKCGKTTIIRDISKKISDGVDALNLKGKKVSVIDERSEIAGSYNGVPQLDVGL-- 198
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGT 98
R V + + + ++ A+ + PEVII DEIGT
Sbjct: 199 RTDVLDNCPKSEGIVMAIRSMAPEVIICDEIGT 231
>gi|83590379|ref|YP_430388.1| hypothetical protein Moth_1536 [Moorella thermoacetica ATCC 39073]
gi|83573293|gb|ABC19845.1| conserved hypothetical protein [Moorella thermoacetica ATCC 39073]
Length = 350
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 11/146 (7%)
Query: 1 MVYDLLHYGKSI--LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGG 52
++ LL G+ + L + P GKTT++R++ R+LS + V +VD +EI G
Sbjct: 165 LIPYLLEGGRPLHTLILSPPRCGKTTLLRDLIRLLSTGVPELKFSGVNVGVVDERSEIAG 224
Query: 53 DG-DIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAER 111
+P +G R V + + M+ + + PEVI DEIG E A + +
Sbjct: 225 CWLGVPQLEVGP--RTDVLDRCPKAAGMLMLLRSMGPEVIATDEIGRPEELAALQDVLHA 282
Query: 112 GVMLIGTAHGEWLENIIKNPILSDLI 137
GV ++ + H LE + P L+
Sbjct: 283 GVTMLASVHAGSLEELQHRPGWGPLL 308
>gi|302872161|ref|YP_003840797.1| AAA ATPase [Caldicellulosiruptor obsidiansis OB47]
gi|302575020|gb|ADL42811.1| AAA ATPase [Caldicellulosiruptor obsidiansis OB47]
Length = 313
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 65/124 (52%), Gaps = 15/124 (12%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDE--------FQKRVVIVDTSNEIGG-DGDIPHSAIGT 63
L + PG GKTT++R I R+LS F RVV++D +EI D D I
Sbjct: 153 LIISPPGCGKTTLLRNIVRILSSGEGILAGRGF--RVVVIDERSEICMVDNDRREIGI-- 208
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 123
R V + + + ++ AV + P++I +DE+G+ ++ A ++ GV +I T H E
Sbjct: 209 --RTFVLDGVDKLRGVLMAVRSLNPQIIAMDELGSPSDYLAVCEASKMGVKIIATMHAES 266
Query: 124 LENI 127
+++I
Sbjct: 267 VKDI 270
>gi|402571564|ref|YP_006620907.1| stage III sporulation protein AA [Desulfosporosinus meridiei DSM
13257]
gi|402252761|gb|AFQ43036.1| stage III sporulation protein AA [Desulfosporosinus meridiei DSM
13257]
Length = 356
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
L + P GKTT++R++ R +S+ K V +VD E+ G IP +G
Sbjct: 193 LLISPPRAGKTTLLRDLIRSISNGVPKLRLEGQTVGVVDERGELAGMWQGIPTYDLGL-- 250
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + + M V + P+V+ VDE+G + A GV ++ TAH LE
Sbjct: 251 RTDVLDGCPKASGMSMMVRSMSPQVLAVDELGHAEDVVAINDALRTGVRILSTAHAGTLE 310
Query: 126 NIIKNPILSDLI 137
PI++ L+
Sbjct: 311 EARSRPIITHLL 322
>gi|312134806|ref|YP_004002144.1| aaa atpase [Caldicellulosiruptor owensensis OL]
gi|311774857|gb|ADQ04344.1| AAA ATPase [Caldicellulosiruptor owensensis OL]
Length = 313
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 15/124 (12%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDE--------FQKRVVIVDTSNEIGG-DGDIPHSAIGT 63
L + PG GKTT++R I R+LS F RVV++D +EI D D IG
Sbjct: 153 LIISPPGCGKTTLLRNIVRILSSGEGILAGRGF--RVVVIDERSEICMVDND--RREIGI 208
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 123
R V + + + ++ AV + P++I +DE+G+ ++ A ++ GV +I T H E
Sbjct: 209 --RTFVLDGVDKLRGVLMAVRSLNPQIIAMDELGSPSDYLAVCEASKMGVKIIATMHAES 266
Query: 124 LENI 127
+++I
Sbjct: 267 VKDI 270
>gi|345861748|ref|ZP_08814000.1| stage III sporulation protein AA [Desulfosporosinus sp. OT]
gi|344325141|gb|EGW36667.1| stage III sporulation protein AA [Desulfosporosinus sp. OT]
Length = 315
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
L + P GKTT++R++ R++S+ + V +VD E+ G +P +G
Sbjct: 154 LLISPPRAGKTTLLRDLIRLISNGVPQLGLMGLTVGVVDERGELAGMWQGVPTYNLGY-- 211
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + + M V + P+VI +DE+G + +A GV ++ TAH +E
Sbjct: 212 RTDVLDGCPKATGMNMIVRSMAPQVIAMDELGHADDVNALMDALRTGVRILSTAHASSIE 271
Query: 126 NIIKNPILSDLI 137
PIL+ L+
Sbjct: 272 EARNRPILAHLL 283
>gi|430750198|ref|YP_007213106.1| stage III sporulation protein AA [Thermobacillus composti KWC4]
gi|430734163|gb|AGA58108.1| stage III sporulation protein AA [Thermobacillus composti KWC4]
Length = 331
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 39/190 (20%)
Query: 11 SILFVGRPGVGKTTVMREIARVLS----------DEFQKRVVIVDTSNEIGGD-GDIPHS 59
S L V P GKTT++R+I R +S D ++V +VD +EI +P
Sbjct: 154 STLIVAPPQQGKTTMLRDIIRSVSYGSWPMPEARDWPARKVGVVDERSEIAACVRGVPVF 213
Query: 60 AIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 119
+G R V + + + M+ + + PE++ DEIG +A A R A GV +I TA
Sbjct: 214 DVGP--RTDVLDACPKAEGMMMLLRSMSPELLAADEIGRPEDAEAIREAAHAGVPVIATA 271
Query: 120 HGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHY 179
H SDL ++AR R + +++ TF ++E+R R
Sbjct: 272 HA------------SDL-----------QDARGRTAIRRLIDEG---TFAAVVELRRRGA 305
Query: 180 WVTHKTEKSV 189
+ + + +
Sbjct: 306 ATSFRVVRPI 315
>gi|295695388|ref|YP_003588626.1| stage III sporulation protein AA [Kyrpidia tusciae DSM 2912]
gi|295410990|gb|ADG05482.1| stage III sporulation protein AA [Kyrpidia tusciae DSM 2912]
Length = 348
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 9/136 (6%)
Query: 11 SILFVGRPGVGKTTVMREIARVLS-DEFQKRV-----VIVDTSNEIGGDGDIPH-SAIGT 63
S L + P GKTT++R++A LS + RV +VD +E+ G H +G
Sbjct: 170 STLILSPPQCGKTTLLRDLAYHLSIGAWHPRVPPLKVAVVDERSELAGTFQGRHYHDLGP 229
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 123
R V + + + M+ V + PEV+I DE+G A+ A GV+++ +AH
Sbjct: 230 --RTDVLDGCPKAEGMMMMVRSMSPEVLITDEVGGAADIAALMEAVGSGVVVLASAHAAS 287
Query: 124 LENIIKNPILSDLIGG 139
L++ P L L+ G
Sbjct: 288 LDDAESRPALRPLLEG 303
>gi|333979376|ref|YP_004517321.1| stage III sporulation protein AA [Desulfotomaculum kuznetsovii DSM
6115]
gi|333822857|gb|AEG15520.1| stage III sporulation protein AA [Desulfotomaculum kuznetsovii DSM
6115]
Length = 336
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
L P GKTT++R+I R LS+ + V +VD +E+ G +P +G
Sbjct: 172 LIFSPPRCGKTTLLRDIIRQLSNGAPELDLPGLTVGVVDERSELAGCYRGVPQRDVGV-- 229
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + + + MI + + P+VI DEIG + + A + GV ++ T HG L
Sbjct: 230 RTDVLDGCPKAEGMIMLLRSMAPQVIATDEIGRDEDIAALEEVFHAGVRVLVTVHGASLA 289
Query: 126 NIIKNPILSDLI 137
+ P L L
Sbjct: 290 ELAARPALQHLF 301
>gi|414154684|ref|ZP_11411001.1| Stage III sporulation protein AA [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
gi|411453515|emb|CCO08905.1| Stage III sporulation protein AA [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
Length = 337
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 59/132 (44%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
+ V P GKTT++R++ R LS+ + V +VD +EI G IP +G
Sbjct: 171 VLVSPPRCGKTTLLRDLVRRLSEGIPELGWPGSNVGVVDERSEIAGCYRGIPQQDVGP-- 228
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + + M+ + + P VI DEIG + A + GV ++ T HG L
Sbjct: 229 RTDVLDACPKAAGMMMLLRSMGPAVIATDEIGRREDVAALEEVLHAGVKVLTTVHGGSLA 288
Query: 126 NIIKNPILSDLI 137
+ P L L
Sbjct: 289 ELADRPALQYLF 300
>gi|354558158|ref|ZP_08977414.1| stage III sporulation protein AA [Desulfitobacterium
metallireducens DSM 15288]
gi|353548883|gb|EHC18327.1| stage III sporulation protein AA [Desulfitobacterium
metallireducens DSM 15288]
Length = 337
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 7/132 (5%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGDIPHSAIGTARR 66
L + P GKTT++R++ R +SD + V +VD EI G H + R
Sbjct: 173 LILSPPRAGKTTLLRDLIRCISDGVPNLSLKGQTVGVVDERGEIAGMWQ-GHPSYNLGCR 231
Query: 67 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 126
+ + + M + + P V+ VDE+G + A GV ++ TAH E E
Sbjct: 232 TDILDGCPKAIGMSMLIRSMSPRVVAVDELGHPQDVEAVLDALRTGVSVLSTAHAESGEE 291
Query: 127 IIKNPILSDLIG 138
K P+L L
Sbjct: 292 AKKRPVLKALFA 303
>gi|384135427|ref|YP_005518141.1| stage III sporulation protein AA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
gi|339289512|gb|AEJ43622.1| stage III sporulation protein AA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
Length = 337
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 11 SILFVGRPGVGKTTVMREIARVLS------DEFQKRVVIVDTSNEIGGDGD-IPHSAIGT 63
S L V P GKTT++R++AR LS D +V ++D +EI G D IP +G
Sbjct: 167 SSLIVSPPQCGKTTLVRDVARRLSYGDFAPDNPGLKVAVIDERSEIAGSVDGIPQFDLGP 226
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHA 104
R V + + + M+ A+ + P V++ DEIG +A A
Sbjct: 227 --RADVLDGCPKAEGMMMAIRSLSPHVVVTDEIGRMEDAEA 265
>gi|261366974|ref|ZP_05979857.1| putative stage III sporulation protein AA [Subdoligranulum
variabile DSM 15176]
gi|282571092|gb|EFB76627.1| putative stage III sporulation protein AA [Subdoligranulum
variabile DSM 15176]
Length = 296
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 58/132 (43%), Gaps = 12/132 (9%)
Query: 12 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTA-RRMQVP 70
+L G PG GKTT +R + R LSD + V +VD E+ D G A +R+ V
Sbjct: 146 LLVAGAPGSGKTTFLRTLVRYLSDT-DEIVCVVDERGELMMSDD------GQAQQRLPVC 198
Query: 71 EPSLQHKVMIEAVENHM----PEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 126
E ++ + P I+ DE+GT A+ A G+ + + H + +
Sbjct: 199 CDVYTRCSKAEGIQMALRCMNPRYIVCDELGTTADTAAVERGVASGICFLASVHCDSPQA 258
Query: 127 IIKNPILSDLIG 138
+ K P L+ L
Sbjct: 259 LQKKPQLARLCA 270
>gi|78044260|ref|YP_360826.1| sporulation protein [Carboxydothermus hydrogenoformans Z-2901]
gi|77996375|gb|ABB15274.1| putative sporulation protein [Carboxydothermus hydrogenoformans
Z-2901]
Length = 315
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 65/127 (51%), Gaps = 11/127 (8%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGG--DGDIPHSAIGTA 64
L + P GKTT++R++AR+ ++ + V IVD +EI G+ P +G
Sbjct: 151 LILSPPRSGKTTMLRDLARIFANGSAQIGIPGIPVGIVDERSEIAACYKGE-PQLDVGI- 208
Query: 65 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 124
R V + + + MI + + P++I+ DEIG E + A +A GV + +AH +
Sbjct: 209 -RADVLDGCPKAQGMIILLRSMAPKLIVTDEIGREEDVGALIEVANAGVAVFTSAHARDM 267
Query: 125 ENIIKNP 131
+++ K P
Sbjct: 268 DDLKKRP 274
>gi|410667979|ref|YP_006920350.1| stage III sporulation protein AA [Thermacetogenium phaeum DSM
12270]
gi|409105726|gb|AFV11851.1| stage III sporulation protein AA [Thermacetogenium phaeum DSM
12270]
Length = 330
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGDGD-IPHSAIGTAR 65
L V P GKTT++R+I R LS + V +VD E+ +P +G
Sbjct: 163 LLVSPPCAGKTTLLRDIIRSLSYGIPELHFPALSVGVVDERCELAACYQGVPQHDLGP-- 220
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R+ V + + MI + + P+VI DEIG + +A + GV ++ T H E
Sbjct: 221 RVDVLDRCPKAAGMIILLRSMAPQVIATDEIGRCEDINAIWEMLYTGVSILATVHASSWE 280
Query: 126 NIIKNPILSDLI 137
+ + P L D++
Sbjct: 281 ELERRPYLQDVV 292
>gi|335356398|ref|ZP_08548268.1| type II secretion system protein E [Lactobacillus animalis KCTC
3501]
Length = 324
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 15/126 (11%)
Query: 12 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV-P 70
++F G G GKTT M ++A+ ++ Q++V+ ++ EI D + ++QV P
Sbjct: 134 VIFAGPMGSGKTTAMYQLAK---NQKQQQVMCIEDPIEIREDSFL---------QVQVNP 181
Query: 71 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 130
+ + + +++A H P++ IV EI A A + A G +++ T H +I+
Sbjct: 182 KAQMDYSTLLKAALRHHPDIFIVGEIRDRQTARAVLTAALSGHLVLSTLHATSAYGVIER 241
Query: 131 PILSDL 136
L+DL
Sbjct: 242 --LADL 245
>gi|291557678|emb|CBL34795.1| Uncharacterized protein conserved in bacteria [Eubacterium siraeum
V10Sc8a]
Length = 303
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 9/123 (7%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGG--DGDIPHSAIGTARRM 67
+ +L VGR GKTT++R++ R + F RV ++D EI +G P +G
Sbjct: 148 RGLLIVGRALSGKTTILRDLCRCIGGMF--RVSLIDERQEIAAVYNGK-PCLDVGLM--T 202
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
V + +I AV P+ I+ DE+G +AE + + G LI TAH + +E
Sbjct: 203 DVFSGYGKTDGIIRAVRCMSPDYIVTDELGADAE--SIKQAVNSGSGLIMTAHADSIEEA 260
Query: 128 IKN 130
+N
Sbjct: 261 YRN 263
>gi|218289649|ref|ZP_03493869.1| stage III sporulation protein AA [Alicyclobacillus acidocaldarius
LAA1]
gi|218240299|gb|EED07482.1| stage III sporulation protein AA [Alicyclobacillus acidocaldarius
LAA1]
Length = 335
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 11 SILFVGRPGVGKTTVMREIARVLS------DEFQKRVVIVDTSNEIGGDGD-IPHSAIGT 63
S L V P GKTT++R++AR S D+ +V ++D +EI G D +P +G
Sbjct: 165 SSLIVSPPQCGKTTLVRDVARRFSYGDFAPDDHGLKVAVIDERSEIAGSVDGVPQFDLGP 224
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHA 104
R V + + + M+ A+ + P V++ DEIG +A A
Sbjct: 225 --RADVLDGCPKAEGMMMAIRSLSPHVVVTDEIGRMEDAEA 263
>gi|365134919|ref|ZP_09343478.1| stage III sporulation protein AA [Subdoligranulum sp. 4_3_54A2FAA]
gi|363613246|gb|EHL64764.1| stage III sporulation protein AA [Subdoligranulum sp. 4_3_54A2FAA]
Length = 308
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 59/135 (43%), Gaps = 6/135 (4%)
Query: 5 LLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGT- 63
L G +L G PG GKTT++R + LS +K V VD EI + S T
Sbjct: 148 LCAPGVGLLIAGAPGSGKTTLLRAVLAELSAAGRKTAV-VDERFEIA---PVEQSGFCTR 203
Query: 64 -ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 122
+ V +H M A+ P+VI+ DE+G + A A GV L+ T H
Sbjct: 204 LPQHCDVLSGYPKHIGMQHALRALAPDVIVCDEVGAMEDIAAITQAANAGVGLVVTIHAP 263
Query: 123 WLENIIKNPILSDLI 137
E + + P + L+
Sbjct: 264 DAETLRRRPQYTALL 278
>gi|392960834|ref|ZP_10326299.1| stage III sporulation protein AA [Pelosinus fermentans DSM 17108]
gi|421054408|ref|ZP_15517376.1| stage III sporulation protein AA [Pelosinus fermentans B4]
gi|421057110|ref|ZP_15520000.1| stage III sporulation protein AA [Pelosinus fermentans B3]
gi|421067733|ref|ZP_15529177.1| stage III sporulation protein AA [Pelosinus fermentans A12]
gi|421071270|ref|ZP_15532390.1| stage III sporulation protein AA [Pelosinus fermentans A11]
gi|392440766|gb|EIW18426.1| stage III sporulation protein AA [Pelosinus fermentans B4]
gi|392447186|gb|EIW24440.1| stage III sporulation protein AA [Pelosinus fermentans A11]
gi|392448088|gb|EIW25292.1| stage III sporulation protein AA [Pelosinus fermentans A12]
gi|392454731|gb|EIW31553.1| stage III sporulation protein AA [Pelosinus fermentans DSM 17108]
gi|392463665|gb|EIW39564.1| stage III sporulation protein AA [Pelosinus fermentans B3]
Length = 333
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 11/132 (8%)
Query: 13 LFVGRPGVGKTTVMREIARVLS--DEFQKR--VVIVDTSNEIGGDGDIPHSAIGTAR--- 65
L + P GKTT++R++ R +S + K V +VD +EI S I T
Sbjct: 167 LIISPPRCGKTTILRDLIRQISMGSKIYKGLPVGVVDERSEIAA----CKSGISTVDLGI 222
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + + M+ + + P V+ DE+G + HA R GV ++ T HG+ L
Sbjct: 223 RTDVLDNCPKAMGMLMLIRSMSPAVVATDELGRAEDIHAVREALNAGVSVVTTVHGKDLN 282
Query: 126 NIIKNPILSDLI 137
++ P + +L+
Sbjct: 283 ELLHRPYIGELL 294
>gi|410657082|ref|YP_006909453.1| Stage III sporulation protein AA [Dehalobacter sp. DCA]
gi|410660119|ref|YP_006912490.1| Stage III sporulation protein AA [Dehalobacter sp. CF]
gi|409019437|gb|AFV01468.1| Stage III sporulation protein AA [Dehalobacter sp. DCA]
gi|409022475|gb|AFV04505.1| Stage III sporulation protein AA [Dehalobacter sp. CF]
Length = 352
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
L V P GKTT++R + + LS+ + V +VD +EI G IP +G
Sbjct: 181 LLVSPPRAGKTTMLRFLVKNLSNGVPQLNLKGHTVGVVDERSEIAGMWQGIPSFDLGCRT 240
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
+ P Q +M+ + + PEV+ VDE+G +A A GV ++ T H L+
Sbjct: 241 DVLDRCPKAQGLIML--IRSMAPEVVAVDELGGREDAAALGEAVRCGVKILATVHAGSLD 298
Query: 126 NIIKNPILSDLI 137
+ K L +L+
Sbjct: 299 ELQKRAHLRELL 310
>gi|442804014|ref|YP_007372163.1| stage III sporulation protein AA [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442739864|gb|AGC67553.1| stage III sporulation protein AA [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 369
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 8/117 (6%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDEFQK-----RVVIVDTSNEIGGDG-DIPHSAIGTA 64
+ L + PG+GKTT++R+I R +S + V +VD +EI +P + +G
Sbjct: 162 NTLIISPPGMGKTTLLRDIIRSVSSGVENIFDGLNVGVVDERSEIAACYRGVPQNNLGY- 220
Query: 65 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 121
R V + + M + + P VI VDE+G + + + GV ++ TAHG
Sbjct: 221 -RTDVINGINKKEGMEILLRSMSPRVIAVDELGNPDDVYTVLKVMNAGVRILATAHG 276
>gi|336427118|ref|ZP_08607122.1| stage III sporulation protein AA [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336009971|gb|EGN39958.1| stage III sporulation protein AA [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 319
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 5/112 (4%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK----RVVIVDTSNEIGGDGDIPHSAIGTARRMQ 68
L + PG GKTT++R+I R +SD V IVD +EI G + R
Sbjct: 156 LIISPPGCGKTTLLRDIIRQVSDGNPYGGGVTVGIVDERSEIAGSFQ-GRAQNDVGLRTD 214
Query: 69 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
+ + + + M+ + + P+VI VDE+G+E + A + + G ++ T H
Sbjct: 215 ILDSCPKAEGMMLLIRSMAPKVIGVDELGSEEDIDAMKKVLSCGCAILATIH 266
>gi|421074477|ref|ZP_15535509.1| stage III sporulation protein AA [Pelosinus fermentans JBW45]
gi|392527518|gb|EIW50612.1| stage III sporulation protein AA [Pelosinus fermentans JBW45]
Length = 333
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 11/132 (8%)
Query: 13 LFVGRPGVGKTTVMREIARVLS--DEFQKR--VVIVDTSNEIGGDGDIPHSAIGTAR--- 65
L + P GKTT++R++ R +S K V +VD +EI S I T
Sbjct: 167 LIISPPRCGKTTILRDLIRQISMGSNIYKGLPVGVVDERSEIAA----CKSGISTVDLGI 222
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + + M+ + + P V+ DE+G + HA R GV ++ T HG+ L
Sbjct: 223 RTDVLDNCPKAMGMLMLIRSMSPAVVATDELGRAEDIHAVREALNAGVSVVTTVHGKDLS 282
Query: 126 NIIKNPILSDLI 137
++ P + +L+
Sbjct: 283 ELLHRPYVGELL 294
>gi|347532101|ref|YP_004838864.1| stage III sporulation protein AA [Roseburia hominis A2-183]
gi|345502249|gb|AEN96932.1| stage III sporulation protein AA [Roseburia hominis A2-183]
Length = 316
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 64/132 (48%), Gaps = 7/132 (5%)
Query: 11 SILFVGRPGVGKTTVMREIARVLS----DEFQKRVVIVDTSNEIGGDG-DIPHSAIGTAR 65
+ L + PG+GKTT +R++ R LS +V +VD +EI IP + +G
Sbjct: 155 NTLMLSPPGIGKTTFLRDLIRQLSAGDAGAPGMKVGVVDERSEIAACHLGIPQNDLGP-- 212
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + + + + + + P+++ VDE+G + + A + G ++GT H ++
Sbjct: 213 RTDVLDGCKKTEGIRMLLRSMSPQILAVDELGGKEDFAAVKQALCCGCRVLGTVHAGCVQ 272
Query: 126 NIIKNPILSDLI 137
++ P L +
Sbjct: 273 ELLDKPYLQACV 284
>gi|374579571|ref|ZP_09652665.1| stage III sporulation protein AA [Desulfosporosinus youngiae DSM
17734]
gi|374415653|gb|EHQ88088.1| stage III sporulation protein AA [Desulfosporosinus youngiae DSM
17734]
Length = 354
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
L + P GKTT++R++ R +S+ + V +VD E+ G +P +G
Sbjct: 193 LLISPPRAGKTTLLRDLIRSISNGVPQLGLRGQTVGVVDERGELAGMWQGVPTYDLGY-- 250
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R + + + + M V + P+V+ VDE+G + A GV ++ TAH +E
Sbjct: 251 RTDILDGCPKARGMSIMVRSMSPQVLAVDELGHREDVIAIADALRTGVQILSTAHAGTIE 310
Query: 126 NIIKNPILSDLI 137
P++S+L+
Sbjct: 311 EARSRPVISNLL 322
>gi|150390255|ref|YP_001320304.1| sporulation stage III, protein AA [Alkaliphilus metalliredigens
QYMF]
gi|149950117|gb|ABR48645.1| Sporulation stage III, protein AA [Alkaliphilus metalliredigens
QYMF]
Length = 346
Score = 44.7 bits (104), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
L V P GKTT++R+I R +S ++ +V +VD +EI + + +G
Sbjct: 173 LIVSPPQCGKTTLLRDIIRNISRGVEEISLKGHKVGVVDERSEIAASFQGVAQNDLGP-- 230
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R V + + M+ + P+VI DEIG + A G+ LI T HG L+
Sbjct: 231 RTDVLDACPKAIGMMMLIRAMSPDVIATDEIGRHEDGMAIEEAIMAGIKLITTVHGNSLD 290
Query: 126 NIIKNPILSDLI 137
I+ ++ LI
Sbjct: 291 EILGRKVIGHLI 302
>gi|18313110|ref|NP_559777.1| conjugal transfer protein [Pyrobaculum aerophilum str. IM2]
gi|18160619|gb|AAL63959.1| conjugal transfer protein, conjectural [Pyrobaculum aerophilum str.
IM2]
Length = 343
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 12/128 (9%)
Query: 2 VYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAI 61
VY + G+ I+ G PG GKTT++ I ++ + Q+ V +D ++E D D I
Sbjct: 193 VYAWVKEGRHIVITGPPGSGKTTLLSVIDDLIPGQLQR--VYIDEADEFDDDPDKNQIKI 250
Query: 62 GTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 121
+++ SL + ++II+ E+ E +A ++ E G+ + T H
Sbjct: 251 RNVNKLREVYASLNRNI----------DIIIIGELQYEEHFNAFKTAVEIGLQTLATMHA 300
Query: 122 EWLENIIK 129
+++ +K
Sbjct: 301 TSVKDALK 308
>gi|289743537|gb|ADD20516.1| replication factor C subunit RFC2 [Glossina morsitans morsitans]
Length = 333
Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 11 SILFVGRPGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 69
+I+ G PGVGKTT ++ +AR+ L D F++ V+ ++ SNE G D+ + I + +V
Sbjct: 54 NIIIAGPPGVGKTTTIQCLARILLGDSFKEAVLELNASNERG--IDVVRNKIKMFAQQKV 111
Query: 70 PEPSLQHKVMIEAVENHMPE 89
P +HK++I + M E
Sbjct: 112 TLPKGRHKIVILDEADSMTE 131
>gi|257439784|ref|ZP_05615539.1| putative stage III sporulation protein AA [Faecalibacterium
prausnitzii A2-165]
gi|257197804|gb|EEU96088.1| putative stage III sporulation protein AA [Faecalibacterium
prausnitzii A2-165]
Length = 326
Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 54/121 (44%), Gaps = 8/121 (6%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 70
+L VG PG GKTT++R IAR L + QK + ++D E+ + G A +
Sbjct: 182 GMLLVGEPGSGKTTLLRSIARELVRQ-QKILSVIDERREL-----FAGNTHGEALDVLAG 235
Query: 71 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 130
P Q M A+ P+VI++DE+G E A GV I T H E
Sbjct: 236 LPKGQAVQM--ALRTLSPQVILLDELGGLDEVTALEQGLFSGVDFIATLHAATPEEATMR 293
Query: 131 P 131
P
Sbjct: 294 P 294
>gi|452993992|emb|CCQ94462.1| Stage III sporulation protein AB (modular protein) [Clostridium
ultunense Esp]
Length = 266
Score = 44.3 bits (103), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%)
Query: 83 VENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 137
+ + P+++I DEIG E + A G+ LI TAHGE L+ I K PIL +
Sbjct: 3 IRSMSPQLLITDEIGQEEDVVALLEAINAGIYLIATAHGEKLDEIEKRPILQKIF 57
>gi|312870429|ref|ZP_07730550.1| type II/IV secretion system protein [Lactobacillus oris PB013-T2-3]
gi|311094046|gb|EFQ52369.1| type II/IV secretion system protein [Lactobacillus oris PB013-T2-3]
Length = 325
Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 12/120 (10%)
Query: 4 DLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGT 63
DLL +LF G G GKTT M ++AR ++D Q+ V+ ++ EI D P +
Sbjct: 126 DLLKQRGLVLFAGPMGSGKTTTMYQLARQVAD--QQVVMAIEDPVEI----DEP-----S 174
Query: 64 ARRMQVPE-PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 122
++QV E + ++ ++ H P+V I+ EI A A G +++GT H +
Sbjct: 175 FVQLQVNELAGMNYQQLLRLGLRHRPDVFIIGEIRDPETAQMTVQAALSGHLVLGTVHAQ 234
>gi|317122021|ref|YP_004102024.1| ATPase AAA [Thermaerobacter marianensis DSM 12885]
gi|315592001|gb|ADU51297.1| AAA ATPase [Thermaerobacter marianensis DSM 12885]
Length = 391
Score = 43.9 bits (102), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 54/115 (46%), Gaps = 10/115 (8%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDEFQ-----KRVVIVDTSNEIGGDGDIPHSAIGTAR 65
S L +G P GKTT++R++AR+ +RV +VD E+ G A
Sbjct: 209 STLLLGPPASGKTTLLRDLARLAGTGLPGRLTAQRVAVVDERGELAAGG-----AFDLGP 263
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
R V E + ++ A+ PEV+I DE+G +A A GV ++ TAH
Sbjct: 264 RTAVLEHCPKQAGIVLALRALSPEVLITDELGGPGDAVAVADAVRAGVTVVATAH 318
>gi|258511760|ref|YP_003185194.1| stage III sporulation protein AA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478486|gb|ACV58805.1| stage III sporulation protein AA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 334
Score = 43.9 bits (102), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 11 SILFVGRPGVGKTTVMREIARVLS-DEFQK-----RVVIVDTSNEIGGDGD-IPHSAIGT 63
S L V P GKTT++R++AR S +F +V ++D +EI G D IP +G
Sbjct: 164 SSLIVSPPQCGKTTLVRDVARRFSYGDFALVDPGLKVAVIDERSEIAGSVDGIPQFDLGP 223
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHA 104
R V + + + M+ A+ + P V++ DEIG +A A
Sbjct: 224 --RADVLDGCPKAEGMMMAIRSLSPHVVVTDEIGRMEDAEA 262
>gi|392394445|ref|YP_006431047.1| stage III sporulation protein AA [Desulfitobacterium dehalogenans
ATCC 51507]
gi|390525523|gb|AFM01254.1| stage III sporulation protein AA [Desulfitobacterium dehalogenans
ATCC 51507]
Length = 359
Score = 43.5 bits (101), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTAR 65
L + P GKTT++R++ R LSD + V +VD E+ G IP +G
Sbjct: 188 LILSPPRGGKTTLLRDLIRRLSDGSPGLNLPGQTVGVVDERRELAGMWQGIPAYNLGC-- 245
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R + + + + + + P+V+ VDE+G + A GV ++ TAH ++
Sbjct: 246 RTDILDGCPKRMGINMLIRSMAPQVVAVDELGHPEDVEAVLDALRTGVKILSTAHASNMD 305
Query: 126 NIIKNPILSDLI 137
+K P L L
Sbjct: 306 EALKRPTLRSLF 317
>gi|160945210|ref|ZP_02092436.1| hypothetical protein FAEPRAM212_02729 [Faecalibacterium prausnitzii
M21/2]
gi|158442941|gb|EDP19946.1| putative stage III sporulation protein AA [Faecalibacterium
prausnitzii M21/2]
Length = 302
Score = 43.5 bits (101), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 57/128 (44%), Gaps = 35/128 (27%)
Query: 7 HYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNE-------------IGGD 53
H+ +L VG PG GKTT++R IAR L+ E Q+ V ++D E IGG
Sbjct: 155 HF-TGLLVVGEPGSGKTTLLRTIARTLA-ERQRLVAVIDERGELFPPEGPLPPLERIGG- 211
Query: 54 GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGV 113
+ AR +Q+ A+ P+VI++DE+G+ E A GV
Sbjct: 212 -------VDKARAVQM------------ALRTLAPQVILLDELGSLEETMALEQGFFSGV 252
Query: 114 MLIGTAHG 121
I + H
Sbjct: 253 DFIASIHA 260
>gi|124027110|ref|YP_001012430.1| TypeII/TypeIV secretory system protein, ATPase [Hyperthermus
butylicus DSM 5456]
gi|123977804|gb|ABM80085.1| TypeII/TypeIV secretory system protein, ATPase [Hyperthermus
butylicus DSM 5456]
Length = 540
Score = 43.5 bits (101), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 68/133 (51%), Gaps = 11/133 (8%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
M++ + Y + ++ G G GKTT++ +A +L E+ +VV ++ + EI IP
Sbjct: 267 MLWAAIQYKQGVIIYGPIGAGKTTLLNALAMLLPPEY--KVVTIEDTPEIS----IPFHD 320
Query: 61 IGTARRMQVP-EPSLQHKVMIEAVENHM---PEVIIVDEIGTEAEAHACRSIAERGVMLI 116
TA ++ +P +Q+ + VE+ + P+VII+ EI + EA+A G I
Sbjct: 321 NWTAMHTRLSDQPGVQNITLQAQVESALRMRPDVIILGEIRSR-EAYAFFQALATGHGGI 379
Query: 117 GTAHGEWLENIIK 129
T H E + +I+
Sbjct: 380 TTVHAESADVLIR 392
>gi|281420206|ref|ZP_06251205.1| negative regulator of genetic competence [Prevotella copri DSM
18205]
gi|281405701|gb|EFB36381.1| negative regulator of genetic competence [Prevotella copri DSM
18205]
Length = 892
Score = 43.5 bits (101), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 84/188 (44%), Gaps = 47/188 (25%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDE------FQKRVVIVDTSNEIGGDGDIPHSAIGTARR 66
+ +G PGVGK+ ++ +A++++++ F KR+V +D + + GT R
Sbjct: 281 VLIGEPGVGKSAIVEGLAQLINNQETSPMFFNKRLVSLDLTAIVA----------GTKFR 330
Query: 67 MQVPEPSLQHKVMIEAVENHMPEVII-VDEIGTEAEAHACRSIAERGVMLIGTAHGEW-- 123
Q E + K +I+ +ENH PE+II +DEI T +IG GE
Sbjct: 331 GQFEE---RIKNVIKELENH-PEIIIFIDEIHT----------------MIGAGSGEGSM 370
Query: 124 -LENIIKNPILSDLIGGVDTVTLGD-------EEARARRCQKSILERKAPPTFYFLIEMR 175
NI+K + +I + TL + + A RR QK ++E ++
Sbjct: 371 DAANILKPALARGIIQCIGATTLDEYRKSIEKDGALERRFQKVLVEPTTREETLLILHNI 430
Query: 176 ERHYWVTH 183
++HY H
Sbjct: 431 KQHYEKHH 438
>gi|119872468|ref|YP_930475.1| type II secretion system protein E [Pyrobaculum islandicum DSM
4184]
gi|119673876|gb|ABL88132.1| type II secretion system protein E [Pyrobaculum islandicum DSM
4184]
Length = 342
Score = 43.5 bits (101), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 12/127 (9%)
Query: 2 VYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAI 61
+Y L+ GK I+ G PG GKTT + + ++ Q+ V +D ++E D I
Sbjct: 193 IYRLIKEGKHIVITGPPGSGKTTFLVALDDLIPPNLQR--VYIDEADEFDEDPKKNQIKI 250
Query: 62 GTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 121
+++ SL + +VI + E+ E HA ++ E G+ + T H
Sbjct: 251 RNVDKIKEVYASLNRNI----------DVIFIGELQYENHFHAFKTATEIGIQTLATMHS 300
Query: 122 EWLENII 128
+ + I
Sbjct: 301 TSVNDAI 307
>gi|325680699|ref|ZP_08160237.1| putative stage III sporulation protein AA [Ruminococcus albus 8]
gi|324107479|gb|EGC01757.1| putative stage III sporulation protein AA [Ruminococcus albus 8]
Length = 294
Score = 43.1 bits (100), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 60/135 (44%), Gaps = 17/135 (12%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ- 68
S+L G P GKTT++R++ R+ + R ++D E+ +A+ R M
Sbjct: 140 SSVLIFGAPSSGKTTILRDLTRMCGMVY--RTTLIDERGEL--------AAVYLGRPMND 189
Query: 69 ------VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 122
V + + + AV P++I+ DEIG+ + + + GV L+ + H +
Sbjct: 190 VGLLTDVFDKYPRKNAIETAVRVMSPQIIVCDEIGSSEDVLSLTYALDSGVKLVCSCHCD 249
Query: 123 WLENIIKNPILSDLI 137
E + + +L+
Sbjct: 250 SFEELNSKANICELL 264
>gi|126459667|ref|YP_001055945.1| type II secretion system protein E [Pyrobaculum calidifontis JCM
11548]
gi|126249388|gb|ABO08479.1| type II secretion system protein E [Pyrobaculum calidifontis JCM
11548]
Length = 342
Score = 43.1 bits (100), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 58/128 (45%), Gaps = 12/128 (9%)
Query: 2 VYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAI 61
+Y + GK ++ G PG GKTT++ I ++ +Q+ V +D ++E D D
Sbjct: 193 IYAAVKGGKHLVVAGPPGAGKTTLLVAIDELIPPTWQR--VYIDEADEFDEDPD------ 244
Query: 62 GTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 121
+ Q+ + I A N +V+ + E+ E +A ++ E G+ T H
Sbjct: 245 ----KNQIKIADVNKSREIYASLNRNIDVVFIGELQYEDHFNAFKTATEIGLQTFATMHA 300
Query: 122 EWLENIIK 129
+E+ +K
Sbjct: 301 ATIEDALK 308
>gi|219669535|ref|YP_002459970.1| stage III sporulation protein AA [Desulfitobacterium hafniense
DCB-2]
gi|219539795|gb|ACL21534.1| stage III sporulation protein AA [Desulfitobacterium hafniense
DCB-2]
Length = 361
Score = 43.1 bits (100), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTAR 65
L + P GKTT++R++ R LSD + V +VD E+ G IP +G
Sbjct: 190 LILSPPRAGKTTLLRDLIRRLSDGSPALNLPGQTVGVVDERRELAGMWQGIPAYNLGC-- 247
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R + + + + + + P+V+ VDE+G + A GV ++ TAH +
Sbjct: 248 RTDILDGCPKRMGINMLIRSMAPQVVAVDELGHPEDVEAVLDALRTGVKILSTAHAATMS 307
Query: 126 NIIKNPILSDLI 137
++ P L L
Sbjct: 308 EALRRPTLKALF 319
>gi|423073519|ref|ZP_17062258.1| stage III sporulation protein AA [Desulfitobacterium hafniense DP7]
gi|361855597|gb|EHL07560.1| stage III sporulation protein AA [Desulfitobacterium hafniense DP7]
Length = 361
Score = 43.1 bits (100), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTAR 65
L + P GKTT++R++ R LSD + V +VD E+ G IP +G
Sbjct: 190 LILSPPRAGKTTLLRDLIRRLSDGSPALNLPGQTVGVVDERRELAGMWQGIPAYNLGC-- 247
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R + + + + + + P+V+ VDE+G + A GV ++ TAH +
Sbjct: 248 RTDILDGCPKRMGINMLIRSMAPQVVAVDELGHPEDVEAVLDALRTGVKILSTAHAATMS 307
Query: 126 NIIKNPILSDLI 137
++ P L L
Sbjct: 308 EALRRPTLKALF 319
>gi|25010234|ref|NP_734629.1| hypothetical protein gbs0159 [Streptococcus agalactiae NEM316]
gi|77413407|ref|ZP_00789600.1| competence protein CglA [Streptococcus agalactiae 515]
gi|23094586|emb|CAD45804.1| Unknown [Streptococcus agalactiae NEM316]
gi|77160577|gb|EAO71695.1| competence protein CglA [Streptococcus agalactiae 515]
Length = 323
Score = 42.7 bits (99), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 60/117 (51%), Gaps = 14/117 (11%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ-KRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 71
LF G G GKTT+M ++A S+ F+ K+++ ++ EI D + ++Q+ E
Sbjct: 136 LFSGPVGSGKTTLMYQLA---SEVFKNKQIITIEDPVEIKNDKML---------QLQLNE 183
Query: 72 P-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
+ + +I+ H P+++I+ EI +A A A + GVM+ T H + + +
Sbjct: 184 DIGMTYDALIKLSLRHRPDILIIGEIRDQATARAVIRASLTGVMVFSTIHAKSISGV 240
>gi|77406337|ref|ZP_00783400.1| competence protein CglA [Streptococcus agalactiae H36B]
gi|77175042|gb|EAO77848.1| competence protein CglA [Streptococcus agalactiae H36B]
Length = 323
Score = 42.7 bits (99), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 31/146 (21%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ-KRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 71
LF G G GKTT+M ++A S+ F+ K+++ ++ EI D + ++Q+ E
Sbjct: 136 LFSGPVGSGKTTLMYQLA---SEVFKNKQIITIEDPVEIKNDKML---------QLQLNE 183
Query: 72 P-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG--------- 121
+ + +I+ H P+++I+ EI +A A A + GVM T H
Sbjct: 184 DIGMTYDALIKLSLRHRPDILIIGEIRDQATARAVIRASLTGVMFFSTIHAKSIPGVYDR 243
Query: 122 --------EWLENIIKNPILSDLIGG 139
+ LEN +K LIGG
Sbjct: 244 LIELGVNYQELENSLKLIAYQRLIGG 269
>gi|421147451|ref|ZP_15607139.1| competence protein ComGA [Streptococcus agalactiae GB00112]
gi|401685883|gb|EJS81875.1| competence protein ComGA [Streptococcus agalactiae GB00112]
Length = 323
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 31/146 (21%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ-KRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 71
LF G G GKTT+M ++A S+ F+ K+++ ++ EI D + ++Q+ E
Sbjct: 136 LFSGPVGSGKTTLMYQLA---SEVFKNKQIITIEDPVEIKNDKML---------QLQLNE 183
Query: 72 P-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG--------- 121
+ + +I+ H P+++I+ EI +A A A + GVM+ T H
Sbjct: 184 DIGMTYDALIKLSLRHRPDILIIGEIRDQATARAVIRASLTGVMVFSTIHAKSIPGVYDR 243
Query: 122 --------EWLENIIKNPILSDLIGG 139
+ LEN +K LIGG
Sbjct: 244 LIELGVNYQELENSLKLIAYQRLIGG 269
>gi|259502892|ref|ZP_05745794.1| competence protein CglA [Lactobacillus antri DSM 16041]
gi|259169143|gb|EEW53638.1| competence protein CglA [Lactobacillus antri DSM 16041]
Length = 325
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 12/112 (10%)
Query: 12 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 71
ILF G G GKTT M ++AR ++D Q+ V+ ++ EI D P + ++QV E
Sbjct: 134 ILFAGPMGSGKTTTMYQLARQVAD--QRVVMAIEDPVEI----DEP-----SFVQLQVNE 182
Query: 72 -PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 122
+ ++ ++ H P+V I+ EI A A G +++GT H +
Sbjct: 183 LAGMNYQQLLRLGLRHRPDVFIIGEIRDPETAQMTVRAALSGQLVLGTVHAQ 234
>gi|421532800|ref|ZP_15979146.1| competence protein ComGA [Streptococcus agalactiae STIR-CD-17]
gi|403641900|gb|EJZ02807.1| competence protein ComGA [Streptococcus agalactiae STIR-CD-17]
Length = 323
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 31/146 (21%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ-KRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 71
LF G G GKTT+M ++A S+ F+ K+++ ++ EI D + ++Q+ E
Sbjct: 136 LFSGPVGSGKTTLMYQLA---SEVFKNKQIITIEDPVEIKNDKML---------QLQLNE 183
Query: 72 P-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG--------- 121
+ + +I+ H P+++I+ EI +A A A + GVM+ T H
Sbjct: 184 DIGMTYDALIKLSLRHRPDILIIGEIRDQATARAVIRASLTGVMVFSTIHAKSIPGVYDR 243
Query: 122 --------EWLENIIKNPILSDLIGG 139
+ LEN +K LIGG
Sbjct: 244 LIELGVNYQELENSLKLIAYQRLIGG 269
>gi|22536347|ref|NP_687198.1| competence protein CglA [Streptococcus agalactiae 2603V/R]
gi|76787380|ref|YP_328894.1| competence protein ComGA [Streptococcus agalactiae A909]
gi|76798818|ref|ZP_00781030.1| competence protein CglA [Streptococcus agalactiae 18RS21]
gi|77410958|ref|ZP_00787314.1| competence protein CglA [Streptococcus agalactiae CJB111]
gi|406708696|ref|YP_006763422.1| competence protein CglA [Streptococcus agalactiae GD201008-001]
gi|424050183|ref|ZP_17787731.1| competence protein ComGA [Streptococcus agalactiae ZQ0910]
gi|22533172|gb|AAM99070.1|AE014199_6 competence protein CglA [Streptococcus agalactiae 2603V/R]
gi|76562437|gb|ABA45021.1| competence protein ComGA [Streptococcus agalactiae A909]
gi|76585825|gb|EAO62371.1| competence protein CglA [Streptococcus agalactiae 18RS21]
gi|77163013|gb|EAO73968.1| competence protein CglA [Streptococcus agalactiae CJB111]
gi|389648258|gb|EIM69768.1| competence protein ComGA [Streptococcus agalactiae ZQ0910]
gi|406649581|gb|AFS44982.1| competence protein CglA [Streptococcus agalactiae GD201008-001]
Length = 323
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 31/146 (21%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ-KRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 71
LF G G GKTT+M ++A S+ F+ K+++ ++ EI D + ++Q+ E
Sbjct: 136 LFSGPVGSGKTTLMYQLA---SEVFKNKQIITIEDPVEIKNDKML---------QLQLNE 183
Query: 72 P-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG--------- 121
+ + +I+ H P+++I+ EI +A A A + GVM+ T H
Sbjct: 184 DIGMTYDALIKLSLRHRPDILIIGEIRDQATARAVIRASLTGVMVFSTIHAKSIPGVYDR 243
Query: 122 --------EWLENIIKNPILSDLIGG 139
+ LEN +K LIGG
Sbjct: 244 LIELGVNYQELENSLKLIAYQRLIGG 269
>gi|339302445|ref|ZP_08651497.1| competence protein ComGA [Streptococcus agalactiae ATCC 13813]
gi|417004282|ref|ZP_11943015.1| competence protein ComGA [Streptococcus agalactiae FSL S3-026]
gi|319744114|gb|EFV96488.1| competence protein ComGA [Streptococcus agalactiae ATCC 13813]
gi|341578081|gb|EGS28478.1| competence protein ComGA [Streptococcus agalactiae FSL S3-026]
Length = 323
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 31/146 (21%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ-KRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 71
LF G G GKTT+M ++A S+ F+ K+++ ++ EI D + ++Q+ E
Sbjct: 136 LFSGPVGSGKTTLMYQLA---SEVFKNKQIITIEDPVEIKNDKML---------QLQLNE 183
Query: 72 P-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG--------- 121
+ + +I+ H P+++I+ EI +A A A + GVM+ T H
Sbjct: 184 DIGMTYDALIKLSLRHRPDILIIGEIRDQATARAVIRASLTGVMVFSTIHAKSIPGVYDR 243
Query: 122 --------EWLENIIKNPILSDLIGG 139
+ LEN +K LIGG
Sbjct: 244 LIELGVNYQELENSLKLIAYQRLIGG 269
>gi|410593867|ref|YP_006950594.1| Type II/IV secretion system protein [Streptococcus agalactiae
SA20-06]
gi|410517506|gb|AFV71650.1| Type II/IV secretion system protein [Streptococcus agalactiae
SA20-06]
Length = 323
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 31/146 (21%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ-KRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 71
LF G G GKTT+M ++A S+ F+ K+++ ++ EI D + ++Q+ E
Sbjct: 136 LFSGPVGSGKTTLMYQLA---SEVFKNKQIITIEDPVEIKNDKML---------QLQLNE 183
Query: 72 P-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG--------- 121
+ + +I+ H P+++I+ EI +A A A + GVM+ T H
Sbjct: 184 DIGMTYDALIKLSLRHRPDILIIGEIRDQATARAVIRASLTGVMVFSTIHAKSIPGVYDR 243
Query: 122 --------EWLENIIKNPILSDLIGG 139
+ LEN +K LIGG
Sbjct: 244 LIELGVNYQELENSLKLIAYQRLIGG 269
>gi|336396013|ref|ZP_08577412.1| competence protein [Lactobacillus farciminis KCTC 3681]
Length = 322
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 12/119 (10%)
Query: 12 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 71
+LF G G GKT++M + R LS ++KRV+ ++ EI D + ++QV E
Sbjct: 135 MLFAGPMGSGKTSLMYALTRQLS--YKKRVMCIEDPIEIVEDSFL---------QLQVNE 183
Query: 72 PS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 129
+ + ++ +I+ H P ++I+ EI A A G ++ T HG+ ++I+
Sbjct: 184 EAGMTYEELIKTTLRHRPGILIIGEIRDAKTAQQAIRAAICGYTVMSTIHGKSKYSVIQ 242
>gi|89895121|ref|YP_518608.1| hypothetical protein DSY2375 [Desulfitobacterium hafniense Y51]
gi|89334569|dbj|BAE84164.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 330
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTAR 65
L + P GKTT++R++ R LSD + V +VD E+ G +P +G
Sbjct: 159 LILSPPRAGKTTLLRDLIRRLSDGSPALNLPGQTVGVVDERRELAGMWQGVPAYNLGC-- 216
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R + + + + + + P+V+ VDE+G + A GV ++ TAH +
Sbjct: 217 RTDILDGCPKRMGINMLIRSMAPQVVAVDELGHPEDVEAVLDALRTGVKILSTAHAATMS 276
Query: 126 NIIKNPILSDLI 137
++ P L L
Sbjct: 277 EALRRPTLKALF 288
>gi|418035514|ref|ZP_12673971.1| hypothetical protein LDBUL1519_00671 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
gi|354690503|gb|EHE90451.1| hypothetical protein LDBUL1519_00671 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
Length = 333
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 10/119 (8%)
Query: 4 DLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGT 63
DL I+ G G GKTT M E+AR LS K V+ ++ E+ +
Sbjct: 136 DLCWLRGMIVTSGPTGSGKTTTMYELARKLSQ--TKMVMTIEDPVEVYEESFFQAQVNAG 193
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 122
AR + + +++A H P+V+I+ EI E AH A G +++ T H +
Sbjct: 194 AR--------ISYASLLKAALRHRPDVLIIGEIRDEETAHLAVDAALSGHLVLATVHAK 244
>gi|195440776|ref|XP_002068216.1| GK10084 [Drosophila willistoni]
gi|194164301|gb|EDW79202.1| GK10084 [Drosophila willistoni]
Length = 333
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 11 SILFVGRPGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 69
+I+ G PGVGKTT ++ +AR+ L D +++ V+ ++ SNE G D+ + I + +V
Sbjct: 53 NIIIAGPPGVGKTTTIQCLARILLGDSYKEAVLELNASNERG--IDVVRNKIKMFAQQKV 110
Query: 70 PEPSLQHKVMIEAVENHMPE 89
P +HK++I + M E
Sbjct: 111 TLPKGRHKIVILDEADSMTE 130
>gi|104773768|ref|YP_618748.1| competence protein ComGA [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116513772|ref|YP_812678.1| Type II secretory pathway/competence component, ATPase
[Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
gi|103422849|emb|CAI97507.1| Putative competence protein ComGA [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116093087|gb|ABJ58240.1| Type II secretory pathway/competence component, ATPase
[Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
Length = 323
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 10/119 (8%)
Query: 4 DLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGT 63
DL I+ G G GKTT M E+AR LS K V+ ++ E+ +
Sbjct: 126 DLCWLRGMIVTSGPTGSGKTTTMYELARKLSQ--TKMVMTIEDPVEVYEESFFQAQVNAG 183
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 122
AR + + +++A H P+V+I+ EI E AH A G +++ T H +
Sbjct: 184 AR--------ISYASLLKAALRHRPDVLIIGEIRDEETAHLAVDAALSGHLVLATVHAK 234
>gi|410584372|ref|ZP_11321475.1| hypothetical protein ThesuDRAFT_00062 [Thermaerobacter subterraneus
DSM 13965]
gi|410504307|gb|EKP93818.1| hypothetical protein ThesuDRAFT_00062 [Thermaerobacter subterraneus
DSM 13965]
Length = 403
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 54/115 (46%), Gaps = 10/115 (8%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDEFQ-----KRVVIVDTSNEIGGDGDIPHSAIGTAR 65
S L +G P GKTT++R++AR+ S +RV +VD E+ G A
Sbjct: 236 STLLIGAPASGKTTLLRDLARLASAGVPGTLAGRRVAVVDERGELAAGG-----AFDLGP 290
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
R V E + + A+ PEV++ DE+G +A A GV ++ TAH
Sbjct: 291 RTAVLEHCPKEAGIPLALRALSPEVLVTDELGGPHDAAAVAEAVHAGVTVVATAH 345
>gi|398342474|ref|ZP_10527177.1| DNA repair protein RadA [Leptospira inadai serovar Lyme str. 10]
Length = 455
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 16/97 (16%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGT-ARRM 67
G +L G PGVGK+T++ EI+R LS++ +K + I G+ S +G A RM
Sbjct: 90 GSLVLIGGEPGVGKSTLILEISRKLSEQGRKLLYI---------SGEESASQVGLRAARM 140
Query: 68 QVPEPS--LQHKVMIEAV----ENHMPEVIIVDEIGT 98
V P+ L + +E V E+ P+++ VD I T
Sbjct: 141 SVLSPNLLLSSETYVENVSAMIEDTEPDLVFVDSIQT 177
>gi|125977992|ref|XP_001353029.1| GA13416 [Drosophila pseudoobscura pseudoobscura]
gi|195172285|ref|XP_002026929.1| GL12737 [Drosophila persimilis]
gi|54641780|gb|EAL30530.1| GA13416 [Drosophila pseudoobscura pseudoobscura]
gi|194112697|gb|EDW34740.1| GL12737 [Drosophila persimilis]
Length = 331
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 11 SILFVGRPGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 69
+I+ G PGVGKTT ++ +AR+ L D +++ V+ ++ SNE G D+ + I + +V
Sbjct: 51 NIIIAGPPGVGKTTTIQCLARILLGDSYKEAVLELNASNERG--IDVVRNKIKMFAQQKV 108
Query: 70 PEPSLQHKVMIEAVENHMPE 89
P +HK++I + M E
Sbjct: 109 TLPKGRHKIVILDEADSMTE 128
>gi|17647857|ref|NP_523915.1| replication factor C subunit 4 [Drosophila melanogaster]
gi|1703054|sp|P53034.1|RFC2_DROME RecName: Full=Replication factor C subunit 2; AltName:
Full=Activator 1 40 kDa subunit; Short=A1 40 kDa
subunit; AltName: Full=Activator 1 subunit 2; AltName:
Full=Replication factor C 40 kDa subunit; Short=RF-C 40
kDa subunit; Short=RFC40; AltName: Full=Replication
factor C subunit 4; Short=DmRfc4
gi|639708|gb|AAB60241.1| rfc40 [Drosophila melanogaster]
gi|7292439|gb|AAF47843.1| replication factor C subunit 4 [Drosophila melanogaster]
gi|20151645|gb|AAM11182.1| LD40483p [Drosophila melanogaster]
gi|220944360|gb|ACL84723.1| RfC40-PA [synthetic construct]
gi|220954324|gb|ACL89705.1| RfC40-PA [synthetic construct]
Length = 331
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 11 SILFVGRPGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 69
+I+ G PGVGKTT ++ +AR+ L D +++ V+ ++ SNE G D+ + I + +V
Sbjct: 51 NIIIAGPPGVGKTTTIQCLARILLGDSYKEAVLELNASNERG--IDVVRNKIKMFAQQKV 108
Query: 70 PEPSLQHKVMIEAVENHMPE 89
P +HK++I + M E
Sbjct: 109 TLPRGRHKIVILDEADSMTE 128
>gi|385815392|ref|YP_005851783.1| Competence protein [Lactobacillus delbrueckii subsp. bulgaricus
2038]
gi|325125429|gb|ADY84759.1| Competence protein [Lactobacillus delbrueckii subsp. bulgaricus
2038]
Length = 323
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 10/119 (8%)
Query: 4 DLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGT 63
DL I+ G G GKTT M E+AR LS K V+ ++ E+ +
Sbjct: 126 DLCWLRGMIVTSGPTGSGKTTTMYELARKLSQ--TKMVMTIEDPVEVYEESFFQAQVNAG 183
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 122
AR + + +++A H P+V+I+ EI E AH A G +++ T H +
Sbjct: 184 AR--------ISYASLLKAALRHRPDVLIIGEIRDEETAHLAVDAALSGHLVLATVHAK 234
>gi|387818104|ref|YP_005678449.1| stage III sporulation protein AA, partial [Clostridium botulinum
H04402 065]
gi|322806146|emb|CBZ03714.1| stage III sporulation protein AA [Clostridium botulinum H04402 065]
Length = 94
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%)
Query: 82 AVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 137
A+ + PEVII DEIGT + + GV LI T HG +E+I P+ +++
Sbjct: 2 AIRSMAPEVIICDEIGTYNDVESILIALNSGVSLITTIHGFGVEDIYNRPVFKEIV 57
>gi|194866271|ref|XP_001971841.1| GG14218 [Drosophila erecta]
gi|190653624|gb|EDV50867.1| GG14218 [Drosophila erecta]
Length = 331
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 11 SILFVGRPGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 69
+I+ G PGVGKTT ++ +AR+ L D +++ V+ ++ SNE G D+ + I + +V
Sbjct: 51 NIIIAGPPGVGKTTTIQCLARILLGDSYKEAVLELNASNERG--IDVVRNKIKMFAQQKV 108
Query: 70 PEPSLQHKVMIEAVENHMPE 89
P +HK++I + M E
Sbjct: 109 TLPRGRHKIVILDEADSMTE 128
>gi|435851879|ref|YP_007313465.1| ATPase, type IV secretory pathway VirB11 component like protein
[Methanomethylovorans hollandica DSM 15978]
gi|433662509|gb|AGB49935.1| ATPase, type IV secretory pathway VirB11 component like protein
[Methanomethylovorans hollandica DSM 15978]
Length = 636
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 18/165 (10%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 68
KSI+FVG GKTT M ++ + E ++V ++ + E+ P+ G R
Sbjct: 380 SKSIVFVGGTASGKTTAMNAVSLFIQPEM--KIVSIEDTRELNLSH--PNWIPGVTRESF 435
Query: 69 VPEP--SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 126
E S+Q ++ A PE I+V E+ AEA+ G T H + +++
Sbjct: 436 AGEERGSIQMYELLRASLRQRPEYILVGEVRG-AEAYVLFQAMSTGHTTFSTMHADSVQS 494
Query: 127 II---KNPILS---DLIGGVDTVTLGDE----EARARRCQKSILE 161
++ +NP ++ +I +D V++ + R RRC KS+ E
Sbjct: 495 VVHRLENPPINVPRIMIQALDIVSIQAQVKVNNERVRRC-KSLTE 538
>gi|195587662|ref|XP_002083580.1| GD13291 [Drosophila simulans]
gi|194195589|gb|EDX09165.1| GD13291 [Drosophila simulans]
Length = 331
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 11 SILFVGRPGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 69
+I+ G PGVGKTT ++ +AR+ L D +++ V+ ++ SNE G D+ + I + +V
Sbjct: 51 NIIIAGPPGVGKTTTIQCLARILLGDSYKEAVLELNASNERG--IDVVRNKIKMFAQQKV 108
Query: 70 PEPSLQHKVMIEAVENHMPE 89
P +HK++I + M E
Sbjct: 109 TLPRGRHKIVILDEADSMTE 128
>gi|195491632|ref|XP_002093645.1| GE20646 [Drosophila yakuba]
gi|194179746|gb|EDW93357.1| GE20646 [Drosophila yakuba]
Length = 331
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 11 SILFVGRPGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 69
+I+ G PGVGKTT ++ +AR+ L D +++ V+ ++ SNE G D+ + I + +V
Sbjct: 51 NIIIAGPPGVGKTTTIQCLARILLGDSYKEAVLELNASNERG--IDVVRNKIKMFAQQKV 108
Query: 70 PEPSLQHKVMIEAVENHMPE 89
P +HK++I + M E
Sbjct: 109 TLPRGRHKIVILDEADSMTE 128
>gi|195337341|ref|XP_002035287.1| GM14011 [Drosophila sechellia]
gi|194128380|gb|EDW50423.1| GM14011 [Drosophila sechellia]
Length = 331
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 11 SILFVGRPGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 69
+I+ G PGVGKTT ++ +AR+ L D +++ V+ ++ SNE G D+ + I + +V
Sbjct: 51 NIIIAGPPGVGKTTTIQCLARILLGDSYKEAVLELNASNERG--IDVVRNKIKMFAQQKV 108
Query: 70 PEPSLQHKVMIEAVENHMPE 89
P +HK++I + M E
Sbjct: 109 TLPRGRHKIVILDEADSMTE 128
>gi|194750805|ref|XP_001957720.1| GF23886 [Drosophila ananassae]
gi|190625002|gb|EDV40526.1| GF23886 [Drosophila ananassae]
Length = 331
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 11 SILFVGRPGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 69
+I+ G PGVGKTT ++ +AR+ L D +++ V+ ++ SNE G D+ + I + +V
Sbjct: 51 NIIIAGPPGVGKTTTIQCLARILLGDSYKEAVLELNASNERG--IDVVRNKIKMFAQQKV 108
Query: 70 PEPSLQHKVMIEAVENHMPE 89
P +HK++I + M E
Sbjct: 109 TLPRGRHKIVILDEADSMTE 128
>gi|418029142|ref|ZP_12667690.1| hypothetical protein LDBUL1632_00484 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
gi|354690860|gb|EHE90802.1| hypothetical protein LDBUL1632_00484 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
Length = 323
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 10/119 (8%)
Query: 4 DLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGT 63
DL I+ G G GKTT M E+AR LS K V+ ++ E+ + + + T
Sbjct: 126 DLCWLRGMIVTSGPTGSGKTTTMYELARKLSQ--TKMVMTIEDPVEVYEE-SFFQAQVNT 182
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 122
R + + +++A H P+V+I+ EI E AH A G +++ T H +
Sbjct: 183 GAR-------ISYASLLKAALRHRPDVLIIGEIRDEETAHLAVDAALSGHLVLATVHAK 234
>gi|77407934|ref|ZP_00784685.1| competence protein CglA [Streptococcus agalactiae COH1]
gi|77173481|gb|EAO76599.1| competence protein CglA [Streptococcus agalactiae COH1]
Length = 199
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 31/146 (21%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQ-KRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 71
LF G G GKTT+M ++A S+ F+ K+++ ++ EI D + ++Q+ E
Sbjct: 12 LFSGPVGSGKTTLMYQLA---SEVFKNKQIITIEDPVEIKNDKML---------QLQLNE 59
Query: 72 P-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG--------- 121
+ + +I+ H P+++I+ EI +A A A + GVM+ T H
Sbjct: 60 DIGMTYDALIKLSLRHRPDILIIGEIRDQATARAVIRASLTGVMVFSTIHAKSIPGVYDR 119
Query: 122 --------EWLENIIKNPILSDLIGG 139
+ LEN +K LIGG
Sbjct: 120 LIELGVNYQELENSLKLIAYQRLIGG 145
>gi|417885137|ref|ZP_12529295.1| type II/IV secretion system protein [Lactobacillus oris F0423]
gi|341596332|gb|EGS38943.1| type II/IV secretion system protein [Lactobacillus oris F0423]
Length = 325
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 12/112 (10%)
Query: 12 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 71
+LF G G GKTT M ++AR ++D Q+ V+ ++ EI D P + ++QV E
Sbjct: 134 VLFAGPMGSGKTTTMYQLARQVAD--QQVVMAIEDPVEI----DEP-----SFVQLQVNE 182
Query: 72 -PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 122
+ ++ ++ H P+V I+ EI A A G +++GT H +
Sbjct: 183 LAGMNYQQLLRLGLRHRPDVFIIGEIRDPETAQMTIQAALSGHLVLGTVHAQ 234
>gi|195375032|ref|XP_002046307.1| GJ12823 [Drosophila virilis]
gi|194153465|gb|EDW68649.1| GJ12823 [Drosophila virilis]
Length = 331
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 11 SILFVGRPGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 69
+I+ G PGVGKTT ++ +AR+ L D ++ V+ ++ SNE G D+ + I + +V
Sbjct: 51 NIIIAGPPGVGKTTTIQCLARILLGDSYKDAVLELNASNERG--IDVVRNKIKMFAQQKV 108
Query: 70 PEPSLQHKVMIEAVENHMPE 89
P +HK++I + M E
Sbjct: 109 TLPRGRHKIVILDEADSMTE 128
>gi|365157848|ref|ZP_09354093.1| hypothetical protein HMPREF1015_00253 [Bacillus smithii 7_3_47FAA]
gi|363622518|gb|EHL73677.1| hypothetical protein HMPREF1015_00253 [Bacillus smithii 7_3_47FAA]
Length = 359
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 11/118 (9%)
Query: 5 LLHYGKSIL-FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGT 63
LL Y ++ F G G GKTT + + + F ++V+ ++ E DG +
Sbjct: 132 LLRYSHGLMIFTGPTGSGKTTTLYSLVSHSTRHFNQKVITLEDPVERQNDGWL------- 184
Query: 64 ARRMQVPEPS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
++QV E + L + ++A+ H P+++IV EI E A A G +++ T H
Sbjct: 185 --QLQVNEKAGLTYSAGLKAILRHDPDIVIVGEIRDEETARITMRAALTGHLVLTTMH 240
>gi|195135525|ref|XP_002012183.1| GI16571 [Drosophila mojavensis]
gi|193918447|gb|EDW17314.1| GI16571 [Drosophila mojavensis]
Length = 331
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 11 SILFVGRPGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 69
+I+ G PGVGKTT ++ +AR+ L D ++ V+ ++ SNE G D+ + I + +V
Sbjct: 51 NIIIAGPPGVGKTTTIQCLARILLGDSYKDAVLELNASNERG--IDVVRNKIKMFAQQKV 108
Query: 70 PEPSLQHKVMIEAVENHMPE 89
P +HK++I + M E
Sbjct: 109 TLPRGRHKIVILDEADSMTE 128
>gi|195012119|ref|XP_001983484.1| GH15919 [Drosophila grimshawi]
gi|193896966|gb|EDV95832.1| GH15919 [Drosophila grimshawi]
Length = 331
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 2 VYDLLHYGKSILFVGRPGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
V+ +I+ G PGVGKTT ++ +AR+ L D ++ V+ ++ SNE G D+ +
Sbjct: 42 VFSTQGNSPNIIIAGPPGVGKTTTIQCLARILLGDSYKDAVLELNASNERG--IDVVRNK 99
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPE 89
I + +V P +HK++I + M E
Sbjct: 100 IKMFAQQKVTLPRGRHKIVILDEADSMTE 128
>gi|392958102|ref|ZP_10323620.1| competence protein comGA [Bacillus macauensis ZFHKF-1]
gi|391875885|gb|EIT84487.1| competence protein comGA [Bacillus macauensis ZFHKF-1]
Length = 379
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 10/119 (8%)
Query: 5 LLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTA 64
LL ILF G G GKTT+M + L F +++V ++ D +
Sbjct: 157 LLRSSGLILFSGPTGSGKTTIMYSLLSQLQQSFSRQIVTLE---------DPVEKKVDLF 207
Query: 65 RRMQVPE-PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 122
+M++ E L + +++ H P+VI++ EI EA A G ++ T H E
Sbjct: 208 LQMEINERAGLTYGSGFKSILRHDPDVIMIGEIRDEATAKLVIRAGLTGHLVFSTLHAE 266
>gi|295100821|emb|CBK98366.1| Uncharacterized protein conserved in bacteria [Faecalibacterium
prausnitzii L2-6]
Length = 293
Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 7/120 (5%)
Query: 12 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 71
+L +G P GKTT++R +AR L+ + + V ++D EI P S A + +
Sbjct: 149 MLLMGEPDSGKTTLLRGVARELAKQ-NRAVAVIDERREI-----FP-SEESAALPLDILS 201
Query: 72 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 131
+ + + A+ P+VI++DE+G E +A GV I T H E + P
Sbjct: 202 GIPKGQAVQMALRTLSPQVILLDELGGMDELYALEQGLFSGVEFIATLHAASWEEAARRP 261
>gi|115399518|ref|XP_001215348.1| DNA repair and recombination protein pif1, mitochondrial precursor
[Aspergillus terreus NIH2624]
gi|114192231|gb|EAU33931.1| DNA repair and recombination protein pif1, mitochondrial precursor
[Aspergillus terreus NIH2624]
Length = 708
Score = 41.6 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 9/100 (9%)
Query: 5 LLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQK---RVVIVDTSN----EIGGDGDIP 57
++ +GKSI F G G GK+ +MREI + L D+++K RV + ++ IGG
Sbjct: 213 VVQHGKSIFFTGSAGTGKSVLMREIIKKLRDKYRKEPDRVAVTASTGLAACNIGGVTLHS 272
Query: 58 HSAIGTARRMQVPEPSLQHKVMIEAVENHM-PEVIIVDEI 96
+ IG + +VPE + K +A + +V+I+DE+
Sbjct: 273 FAGIGLGKD-KVPELVKKVKRNPKARNRWLRTKVLIIDEV 311
>gi|213402955|ref|XP_002172250.1| lon protease Lon1 [Schizosaccharomyces japonicus yFS275]
gi|212000297|gb|EEB05957.1| lon protease Lon1 [Schizosaccharomyces japonicus yFS275]
Length = 1062
Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 25/102 (24%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK I VG PGVGKT++ R IAR L+ EF + V + D + EI G G +P I
Sbjct: 560 GKIICLVGPPGVGKTSIGRSIARSLNREFYRFSVGGLTDVA-EIKGHRRTYVGAMPGKVI 618
Query: 62 GTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAH 103
+++Q P +I++DEI ++H
Sbjct: 619 QALKKVQTENP-----------------LILIDEIDKVGKSH 643
>gi|254573528|ref|XP_002493873.1| ATP-dependent Lon protease, involved in degradation of misfolded
proteins in mitochondria [Komagataella pastoris GS115]
gi|238033672|emb|CAY71694.1| ATP-dependent Lon protease, involved in degradation of misfolded
proteins in mitochondria [Komagataella pastoris GS115]
gi|328354306|emb|CCA40703.1| Lon-like ATP-dependent protease [Komagataella pastoris CBS 7435]
Length = 1106
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 14/127 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 68
GK I FVG PGVGKT++ + IAR L+ +F + V GG D+ S I RR
Sbjct: 584 GKIICFVGPPGVGKTSIGKSIARALNRKFYRFSV--------GGLSDV--SEIKGHRRTY 633
Query: 69 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGV---MLIGTAHGEWLE 125
V + ++ E P +I++DEI + H+ +L + +L+
Sbjct: 634 VGAIPGRVVQALKKTETENP-LILIDEIDKISHTHSVNGGDPSSALLELLDPEQNNSFLD 692
Query: 126 NIIKNPI 132
N + PI
Sbjct: 693 NYMDVPI 699
>gi|156838346|ref|XP_001642880.1| hypothetical protein Kpol_1007p5 [Vanderwaltozyma polyspora DSM
70294]
gi|156113457|gb|EDO15022.1| hypothetical protein Kpol_1007p5 [Vanderwaltozyma polyspora DSM
70294]
Length = 672
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK I FVG PGVGKT++ + IAR L+ +F + V + D + EI G G +P I
Sbjct: 160 GKIICFVGPPGVGKTSIGKSIARSLNRQFTRFSVGGLTDVA-EIKGHRRTYIGALPGRII 218
Query: 62 GTARRMQVPEP 72
+ ++ Q P
Sbjct: 219 QSLKKCQTQNP 229
>gi|444315053|ref|XP_004178184.1| hypothetical protein TBLA_0A08760 [Tetrapisispora blattae CBS 6284]
gi|387511223|emb|CCH58665.1| hypothetical protein TBLA_0A08760 [Tetrapisispora blattae CBS 6284]
Length = 1189
Score = 41.6 bits (96), Expect = 0.25, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK + FVG PGVGKT++ + IAR LS EF + V + D + EI G G +P I
Sbjct: 676 GKILCFVGPPGVGKTSIGKSIARSLSREFYRFSVGGLTDVA-EIKGHRRTYIGALPGRII 734
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 735 QAMKKCQTQNP 745
>gi|374339837|ref|YP_005096573.1| adenylate kinase family protein [Marinitoga piezophila KA3]
gi|372101371|gb|AEX85275.1| adenylate kinase family protein [Marinitoga piezophila KA3]
Length = 219
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 84/217 (38%), Gaps = 51/217 (23%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 70
++LF G PG GK T+ +E+++ IPH + G R +V
Sbjct: 5 NLLFFGPPGAGKGTIAKEVSKKYG---------------------IPHISTGDMLRAEVA 43
Query: 71 EPSLQHKVMIEAVENHMPEVIIVDEIGTEA-EAHACRSIAERGVMLIG----TAHGEWLE 125
S + E +E ++ DEI E + + E+G +L G E LE
Sbjct: 44 SGSELGNKVKEILEKGQ---LVSDEIMLEVIKNRLQQKDVEKGFILDGFPRTLPQAEGLE 100
Query: 126 NI---IKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVT 182
+ IKNPI + L VD T+ R C K Y LI ++ + +
Sbjct: 101 KLLEEIKNPITASLYFEVDVETVVKRITNRRICPKC-------GKIYNLITLKPKVDNIC 153
Query: 183 HKTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTY 219
+ + I++ DD+ +VV DR+K Y
Sbjct: 154 DECGTQL------------IQRDDDKEDVVRDRYKVY 178
>gi|357636533|ref|ZP_09134408.1| type II/IV secretion system protein [Streptococcus macacae NCTC
11558]
gi|357584987|gb|EHJ52190.1| type II/IV secretion system protein [Streptococcus macacae NCTC
11558]
Length = 313
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 67/163 (41%), Gaps = 29/163 (17%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEP 72
LF G G GKTT+M +IAR F K+++ ++ EI ++Q+ E
Sbjct: 136 LFSGPVGSGKTTLMYQIAR--EKFFNKQIITIEDPVEI---------KEANMLQLQLNEN 184
Query: 73 -SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW-------- 123
+ + +I+ H P+++I+ EI A A + GV+++ T H +
Sbjct: 185 IGMTYDSLIKLSLRHRPDILIIGEIRDRETARAVIRASLTGVLVMSTVHAKSIPGVYARL 244
Query: 124 ---------LENIIKNPILSDLIGGVDTVTLGDEEARARRCQK 157
LEN + I LI G + ++ + QK
Sbjct: 245 LELGVNPKELENTLGGIIYQRLISGGGVLDFAKDKFQEHSAQK 287
>gi|376262665|ref|YP_005149385.1| Flp pilus assembly protein, ATPase CpaF [Clostridium sp. BNL1100]
gi|373946659|gb|AEY67580.1| Flp pilus assembly protein, ATPase CpaF [Clostridium sp. BNL1100]
Length = 479
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 9/128 (7%)
Query: 4 DLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDT-SNEIG----GDGDIPH 58
+ L YG SI G GKTT+ + + D KR+ ++ S E+ DG + +
Sbjct: 236 ECLRYGISICVAGATSSGKTTLAGWLLTTIPD--NKRIFTIENGSRELALVRQRDGKVCN 293
Query: 59 SAIGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIG 117
S I T RM E S+ ++++ PE+I V E+ EA+A + A G ++
Sbjct: 294 SVIHTLTRMSENEKQSIDQDILLDMALRFNPEIICVGEM-RGPEAYAAQESARTGHTVLT 352
Query: 118 TAHGEWLE 125
T H E
Sbjct: 353 TIHSNSCE 360
>gi|443317662|ref|ZP_21047027.1| pilus retraction protein PilT [Leptolyngbya sp. PCC 6406]
gi|442782739|gb|ELR92714.1| pilus retraction protein PilT [Leptolyngbya sp. PCC 6406]
Length = 361
Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 6/118 (5%)
Query: 4 DLLHYGKSILFVGRP-GVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIG 62
DL HY K ++ V P G GK+T M + ++ E K +V ++ E + S
Sbjct: 126 DLCHYHKGLILVTGPTGSGKSTTMAAMIDYMNKEMAKHIVTIEDPIEF-----VHTSQKS 180
Query: 63 TARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
++ +V +L+ + ++A P+VI+V E+ + + A+ G +++GT H
Sbjct: 181 LIKQREVGRHTLKFESALKASLREDPDVILVGEMRDKETVNTALKAAQTGHLVMGTLH 238
>gi|222055748|ref|YP_002538110.1| twitching motility protein [Geobacter daltonii FRC-32]
gi|221565037|gb|ACM21009.1| twitching motility protein [Geobacter daltonii FRC-32]
Length = 356
Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 33/125 (26%)
Query: 12 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVD-------TSN-------EIGGDGDIP 57
IL G G GK+T + + R L++ F ++ ++ TS E+G D D
Sbjct: 129 ILVTGPTGNGKSTTLASMLRFLNENFNHNIITIEDPIEFLFTSQKSCIIQREVGIDTDSF 188
Query: 58 HSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIG 117
+SA+ +A RM P+VI+V E+ + AC AE G +++
Sbjct: 189 NSALKSALRMD-------------------PDVIMVGEMRDKETIDACIKTAETGHLVLS 229
Query: 118 TAHGE 122
T H +
Sbjct: 230 TLHTQ 234
>gi|307546696|ref|YP_003899175.1| DNA repair protein RadA [Halomonas elongata DSM 2581]
gi|307218720|emb|CBV43990.1| DNA repair protein RadA [Halomonas elongata DSM 2581]
Length = 485
Score = 41.2 bits (95), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 15/96 (15%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 68
G ++L G PG GK+T++ + A L+ Q+RV+ V G+ + A+ A R+Q
Sbjct: 123 GSAVLLGGHPGAGKSTLLLQTACKLAQ--QRRVLYVT------GEESLSQVAM-RAHRLQ 173
Query: 69 VPEPSLQH------KVMIEAVENHMPEVIIVDEIGT 98
+P LQ + ++ E PEV+I+D I T
Sbjct: 174 LPTQGLQMLAETSIETILGVAERERPEVLIIDSIQT 209
>gi|408411471|ref|ZP_11182629.1| Putative competence protein ComGA [Lactobacillus sp. 66c]
gi|407874386|emb|CCK84435.1| Putative competence protein ComGA [Lactobacillus sp. 66c]
Length = 324
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 10/111 (9%)
Query: 12 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 71
I+ G G GKTT M E+A+ LS K V+ ++ E+ +G + I P
Sbjct: 135 IITSGPTGSGKTTTMYELAKRLSQT--KMVMTIEDPVEVH-EGSFLQTQIN-------PV 184
Query: 72 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 122
+ + +++A H P+V+I+ EI AH A G +++ T H +
Sbjct: 185 AGISYLSLLKAALRHRPDVLIIGEIRDSETAHLAVDAALSGHLVLATVHAK 235
>gi|423335885|ref|ZP_17313636.1| competence protein [Lactobacillus reuteri ATCC 53608]
gi|337729088|emb|CCC04211.1| competence protein [Lactobacillus reuteri ATCC 53608]
Length = 323
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 18/136 (13%)
Query: 12 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVI-VDTSNEIGGDGDIPHSAIGTARRMQVP 70
ILF G G GKTT M ++AR L K++V+ ++ EI G I ++QV
Sbjct: 134 ILFAGPMGAGKTTTMYQLARQL---LPKQIVLTIEDPVEIDHPGFI---------QLQVN 181
Query: 71 E-PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 129
E + ++ +++ H P+V I+ EI A A G +++GT H +I
Sbjct: 182 ELAGMNYESLLKLGLRHRPDVFIIGEIRDSQTAAMSVQAALSGHLVLGTIHARNAYGVIS 241
Query: 130 NPILSDLIGGVDTVTL 145
L L G+D+ L
Sbjct: 242 R--LQQL--GIDSYYL 253
>gi|330796410|ref|XP_003286260.1| hypothetical protein DICPUDRAFT_30635 [Dictyostelium purpureum]
gi|325083765|gb|EGC37209.1| hypothetical protein DICPUDRAFT_30635 [Dictyostelium purpureum]
Length = 887
Score = 41.2 bits (95), Expect = 0.31, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 25/95 (26%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK I F+G PG GKT++ + IA+ L EF + V +VD S EI G G +P I
Sbjct: 444 GKIICFIGPPGTGKTSIAKSIAKCLKKEFYRFSVGGLVDES-EIKGHRRTYIGAMPGKII 502
Query: 62 GTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEI 96
+ Q P VI++DEI
Sbjct: 503 QAMKLTQTSNP-----------------VILIDEI 520
>gi|196013125|ref|XP_002116424.1| hypothetical protein TRIADDRAFT_38259 [Trichoplax adhaerens]
gi|190581015|gb|EDV21094.1| hypothetical protein TRIADDRAFT_38259 [Trichoplax adhaerens]
Length = 943
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 8 YGKSILFVGRPGVGKTTVMREIARVLSDEF 37
+GK I FVG PGVGKT++ + IAR L+ EF
Sbjct: 509 HGKIICFVGPPGVGKTSIGKSIARALNREF 538
>gi|73667120|ref|YP_303136.1| Mg chelatase-like protein [Ehrlichia canis str. Jake]
gi|72394261|gb|AAZ68538.1| Mg chelatase-related protein [Ehrlichia canis str. Jake]
Length = 506
Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 69/160 (43%), Gaps = 18/160 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 68
G ++L VG PG GK+ + + + +L D K+++ ++T I + ++I T R +
Sbjct: 209 GHNVLMVGPPGTGKSMIAKRLPGILPDLTYKQIIEINTIKSITKKCN---NSISTTRPFR 265
Query: 69 VPEPSLQHKVMIEAVENHMP--------EVIIVDEIG--TEAEAHACRSIAERGVMLIGT 118
P SL M+ +N P ++ +DE+ + + A R E +LI
Sbjct: 266 DPHSSLSIAAMVGGGKNVKPGEITLAHQGILFLDELPEFSRSVLDALRQPLENKEILISR 325
Query: 119 AHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKS 158
A+ IK P LI ++ G ++ C K+
Sbjct: 326 ANIN-----IKYPANFQLIAAMNPCRCGYFGDSSKACSKA 360
>gi|345880614|ref|ZP_08832160.1| hypothetical protein HMPREF9431_00824 [Prevotella oulorum F0390]
gi|343922526|gb|EGV33226.1| hypothetical protein HMPREF9431_00824 [Prevotella oulorum F0390]
Length = 731
Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Query: 7 HYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSN--EIGGDGDIPHSAIGTA 64
H G S+ G+ G GKTT +R+ E QKR VIV + + G HS
Sbjct: 17 HTGTSVFLTGKAGTGKTTFLRQFV----AETQKRFVIVAPTGVAAVNARGVTIHSFFQLP 72
Query: 65 RRMQVPEPSLQHKVMIEAVENHM---PEVIIVDEIG 97
VP + + K A++ ++ +++I+DEI
Sbjct: 73 FSPYVPHMTYKEKFAFSAIKRNILKTLDLLIIDEIS 108
>gi|352683097|ref|YP_004893621.1| conjugal transfer ATPase [Thermoproteus tenax Kra 1]
gi|350275896|emb|CCC82543.1| trbB Conjugal transfer protein, ATPase [Thermoproteus tenax Kra 1]
Length = 335
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 58/126 (46%), Gaps = 12/126 (9%)
Query: 4 DLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGT 63
++L+ K+++ G PG GKTT++R I L + +Q+ V +D ++E + I T
Sbjct: 187 NILNKRKNLIVTGPPGSGKTTLLRAIDLDLPEWWQR--VYIDEADEFPDLKNYNQIKINT 244
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 123
+++ SL + ++ I+ E+ A + E G+ + T H +
Sbjct: 245 VDKLKHVFSSLNRNI----------DIFILGELQYPEHFEAFKRAQELGIQTMATMHSDT 294
Query: 124 LENIIK 129
+E IK
Sbjct: 295 IEGAIK 300
>gi|427421561|ref|ZP_18911744.1| thymidylate kinase [Leptolyngbya sp. PCC 7375]
gi|425757438|gb|EKU98292.1| thymidylate kinase [Leptolyngbya sp. PCC 7375]
Length = 364
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 7 HYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDI 56
YGK I+F G GVGKTT+ ++IA+ L+D +K ++ E G GD+
Sbjct: 22 QYGKLIVFEGPDGVGKTTIAQKIAQCLNDSDEKCKLMAFPGKEPGTLGDL 71
>gi|255076393|ref|XP_002501871.1| lon protease [Micromonas sp. RCC299]
gi|226517135|gb|ACO63129.1| lon protease [Micromonas sp. RCC299]
Length = 904
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 21/28 (75%)
Query: 12 ILFVGRPGVGKTTVMREIARVLSDEFQK 39
+ F G PGVGKTT+ R IARVLS FQ+
Sbjct: 412 LCFTGPPGVGKTTLARSIARVLSRPFQR 439
>gi|325290033|ref|YP_004266214.1| stage III sporulation protein AA [Syntrophobotulus glycolicus DSM
8271]
gi|324965434|gb|ADY56213.1| stage III sporulation protein AA [Syntrophobotulus glycolicus DSM
8271]
Length = 344
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 54/124 (43%), Gaps = 9/124 (7%)
Query: 11 SILFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGT 63
+ L + P GKTTV+R + + LS+ + V +VD EI G IP +G
Sbjct: 171 NTLIISPPRAGKTTVLRMLIKTLSNGLPAIQLAGQPVGVVDERGEIAGIWQGIPAFDLGI 230
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 123
+ P M+ + + P V+ VDE+G + + GV +I TAH
Sbjct: 231 RTDILDRTPKALGIAML--IRSMSPSVVAVDELGAPEDVRSLEDAVRCGVKIIATAHAGS 288
Query: 124 LENI 127
+E I
Sbjct: 289 IEEI 292
>gi|428779941|ref|YP_007171727.1| pilus retraction protein PilT [Dactylococcopsis salina PCC 8305]
gi|428694220|gb|AFZ50370.1| pilus retraction protein PilT [Dactylococcopsis salina PCC 8305]
Length = 429
Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 55/118 (46%), Gaps = 6/118 (5%)
Query: 4 DLLHYGKSILFVGRP-GVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIG 62
D+ HY K ++ V P G GK+T M + ++ E K V+ ++ E + S
Sbjct: 194 DICHYHKGMILVTGPTGSGKSTTMAAMVDYINQEMPKHVITIEDPIEF-----VHQSKKS 248
Query: 63 TARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
R+ +V +LQ ++A P++I++ E+ + A+ G +++GT H
Sbjct: 249 LIRQREVGMHTLQFDKALKASLREDPDIILIGEMRDRETVNTALKAAQTGHVVMGTLH 306
>gi|409350672|ref|ZP_11233720.1| Putative competence protein ComGA [Lactobacillus equicursoris CIP
110162]
gi|407877292|emb|CCK85778.1| Putative competence protein ComGA [Lactobacillus equicursoris CIP
110162]
Length = 324
Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 10/111 (9%)
Query: 12 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 71
I+ G G GKTT M E+A+ LS K V+ ++ E+ +G + I P
Sbjct: 135 IITSGPTGSGKTTTMYELAKRLSQT--KMVMTIEDPVEVH-EGSFLQTQIN-------PV 184
Query: 72 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 122
+ + +++A H P+V+I+ EI AH A G +++ T H +
Sbjct: 185 AGISYLSLLKAALRHRPDVLIIGEIRDSETAHLAVDAALSGHLVLATVHAK 235
>gi|408790759|ref|ZP_11202372.1| DNA repair protein RadA [Lactobacillus florum 2F]
gi|408519948|gb|EKK20061.1| DNA repair protein RadA [Lactobacillus florum 2F]
Length = 460
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 25/119 (21%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIV---DTSNEIGGDGDIPHSAIGTAR 65
G +L G PG+GK+T++ +++ LS + QKRV+ V ++++++ D
Sbjct: 92 GSLVLIGGDPGIGKSTLLLQVSGELS-QLQKRVLYVTGEESADQVKMRAD---------- 140
Query: 66 RMQVPE-------PSLQHKVMIEAVENHMPEVIIVDEIGTEAEA---HACRSIAE-RGV 113
R+Q+P+ P + +A+ + P V+IVD + T E+ A S+A+ RGV
Sbjct: 141 RLQIPQNEDLYVFPETDMTAIRDAIADLKPNVVIVDSVQTMQESTVTSAIGSVAQVRGV 199
>gi|365983482|ref|XP_003668574.1| hypothetical protein NDAI_0B02960 [Naumovozyma dairenensis CBS 421]
gi|343767341|emb|CCD23331.1| hypothetical protein NDAI_0B02960 [Naumovozyma dairenensis CBS 421]
Length = 1159
Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK I FVG PGVGKT++ + IAR L+ +F + V + D + EI G G +P I
Sbjct: 646 GKIICFVGPPGVGKTSIGKSIARALNRQFFRFSVGGMTDVA-EIKGHRRTYIGALPGRVI 704
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 705 QAMKKCQTQNP 715
>gi|66817990|ref|XP_642688.1| peptidase S16, Lon protease family protein [Dictyostelium
discoideum AX4]
gi|74857001|sp|Q550C8.1|LONM2_DICDI RecName: Full=Lon protease homolog, mitochondrial 2; Flags:
Precursor
gi|60470868|gb|EAL68840.1| peptidase S16, Lon protease family protein [Dictyostelium
discoideum AX4]
Length = 836
Score = 40.8 bits (94), Expect = 0.43, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 15/90 (16%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 68
GK IL VG PG GKT+V + IA L +F + +GG D+ S I RR
Sbjct: 384 GKVILLVGPPGTGKTSVGKSIANALGRQFHRI--------SVGGLSDV--SEIKGHRRTY 433
Query: 69 VPEPSLQHKVM--IEAVENHMPEVIIVDEI 96
V S+ K++ ++ V+ P VI++DEI
Sbjct: 434 V--ASMPGKIIQALKTVKTSNP-VILIDEI 460
>gi|374993713|ref|YP_004969212.1| stage III sporulation protein AA [Desulfosporosinus orientis DSM
765]
gi|357212079|gb|AET66697.1| stage III sporulation protein AA [Desulfosporosinus orientis DSM
765]
Length = 353
Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 65
L + P GKTT +R++ R +S+ + V +VD E+ G +P +G
Sbjct: 191 LIISPPRAGKTTFLRDLIRSISNGVPQIGLRGLTVGVVDERGELAGMWQGVPTYDLGLQT 250
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
+ P M+ V + P+V+ +DEIG + A GV ++ TAH E
Sbjct: 251 DIMDSCPKASGLSML--VRSMSPQVVAMDEIGHMDDVAAITDALRTGVRILCTAHASSFE 308
Query: 126 NIIKNPILSDLI 137
+ P ++ L+
Sbjct: 309 EAHRRPAIAALL 320
>gi|160940637|ref|ZP_02087980.1| hypothetical protein CLOBOL_05531 [Clostridium bolteae ATCC
BAA-613]
gi|158436372|gb|EDP14139.1| hypothetical protein CLOBOL_05531 [Clostridium bolteae ATCC
BAA-613]
Length = 454
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 7/126 (5%)
Query: 6 LHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEI-----GGDGDIPHSA 60
+ YG S+ G G GKTTVM + ++ D ++ + I + S E DG I +S
Sbjct: 211 IRYGVSVCIAGSTGSGKTTVMSWLLSMVPDN-RRLITIEEGSREFDLVKRDADGKILNSV 269
Query: 61 IGTARR-MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 119
+ R + P + +++E V P+VI V E+ + EA + + G ++ T
Sbjct: 270 VHLLTRPHENPALDIDQDILLERVLRKHPDVIGVGEMRSAKEALSVAESSRTGHTVVTTI 329
Query: 120 HGEWLE 125
H E
Sbjct: 330 HSNSAE 335
>gi|194468353|ref|ZP_03074339.1| type II secretion system protein E [Lactobacillus reuteri 100-23]
gi|194453206|gb|EDX42104.1| type II secretion system protein E [Lactobacillus reuteri 100-23]
Length = 325
Score = 40.4 bits (93), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 14/112 (12%)
Query: 12 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVI-VDTSNEIGGDGDIPHSAIGTARRMQVP 70
ILF G G GKTT M ++AR L K+VV+ ++ EI G I ++Q+
Sbjct: 134 ILFAGPMGAGKTTTMYQLARQL---LPKQVVLTIEDPVEIDHPGFI---------QLQIN 181
Query: 71 E-PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 121
E + ++ +++ H P+V I+ EI A A G +++GT H
Sbjct: 182 ELAGMDYESLLKLGLRHRPDVFIIGEIRDSQTAAMSVQAALSGHLVLGTIHA 233
>gi|305664052|ref|YP_003860340.1| type II secretion system protein E [Ignisphaera aggregans DSM
17230]
gi|304378621|gb|ADM28460.1| type II secretion system protein E [Ignisphaera aggregans DSM
17230]
Length = 515
Score = 40.4 bits (93), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 9/123 (7%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 69
+ I+F G G GKTT++ IA ++ E ++V V+ + EI + + + T R+
Sbjct: 244 QGIIFYGPTGSGKTTLLNAIAMLIPPEL--KIVTVEDTPEI--RLPLHDNWVSTVTRLS- 298
Query: 70 PEPSLQHKVMIEAVENHM---PEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 126
+P +Q + VE+ M P+++I+ EI + EA++ G + T H E +E+
Sbjct: 299 NDPHIQSITLQTQVESAMRQRPDILILGEIRSR-EAYSFFQAVSTGHGGLTTVHAESVES 357
Query: 127 IIK 129
+IK
Sbjct: 358 LIK 360
>gi|148543788|ref|YP_001271158.1| type II secretion system protein E [Lactobacillus reuteri DSM
20016]
gi|184153194|ref|YP_001841535.1| competence protein [Lactobacillus reuteri JCM 1112]
gi|227363232|ref|ZP_03847364.1| competence protein ComGA [Lactobacillus reuteri MM2-3]
gi|325682160|ref|ZP_08161678.1| competence protein ComGA [Lactobacillus reuteri MM4-1A]
gi|148530822|gb|ABQ82821.1| type II secretion system protein E [Lactobacillus reuteri DSM
20016]
gi|183224538|dbj|BAG25055.1| competence protein [Lactobacillus reuteri JCM 1112]
gi|227071688|gb|EEI09979.1| competence protein ComGA [Lactobacillus reuteri MM2-3]
gi|324978804|gb|EGC15753.1| competence protein ComGA [Lactobacillus reuteri MM4-1A]
Length = 325
Score = 40.4 bits (93), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 14/112 (12%)
Query: 12 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVI-VDTSNEIGGDGDIPHSAIGTARRMQVP 70
ILF G G GKTT M ++AR L K++V+ ++ EI G I ++QV
Sbjct: 134 ILFAGPMGAGKTTTMYQLARQL---LPKQIVLTIEDPVEIDHPGFI---------QLQVN 181
Query: 71 E-PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 121
E + ++ +++ H P+V I+ EI A A G +++GT H
Sbjct: 182 ELAGMDYESLLKLGLRHRPDVFIIGEIRDSQTAAMSVQAALSGHLVLGTIHA 233
>gi|227544184|ref|ZP_03974233.1| competence protein ComGA [Lactobacillus reuteri CF48-3A]
gi|338204136|ref|YP_004650281.1| competence protein [Lactobacillus reuteri SD2112]
gi|227185820|gb|EEI65891.1| competence protein ComGA [Lactobacillus reuteri CF48-3A]
gi|336449376|gb|AEI57991.1| competence protein [Lactobacillus reuteri SD2112]
Length = 325
Score = 40.4 bits (93), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 14/112 (12%)
Query: 12 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVI-VDTSNEIGGDGDIPHSAIGTARRMQVP 70
ILF G G GKTT M ++AR L K++V+ ++ EI G I ++QV
Sbjct: 134 ILFAGPMGAGKTTTMYQLARQL---LPKQIVLTIEDPVEIDHPGFI---------QLQVN 181
Query: 71 E-PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 121
E + ++ +++ H P+V I+ EI A A G +++GT H
Sbjct: 182 ELAGMDYESLLKLGLRHRPDVFIIGEIRDSQTAAMSVQAALSGHLVLGTIHA 233
>gi|323339504|ref|ZP_08079782.1| competence protein ComGA [Lactobacillus ruminis ATCC 25644]
gi|417972857|ref|ZP_12613743.1| ComG operon protein 1 [Lactobacillus ruminis ATCC 25644]
gi|323093073|gb|EFZ35667.1| competence protein ComGA [Lactobacillus ruminis ATCC 25644]
gi|346330774|gb|EGX99007.1| ComG operon protein 1 [Lactobacillus ruminis ATCC 25644]
Length = 328
Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 17/113 (15%)
Query: 12 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP- 70
IL G G GKTT M E+AR ++D K+++ ++ E I R +QV
Sbjct: 136 ILLSGPMGSGKTTTMYELARKMTD---KQIMCIEDPVE-----------IAEPRFLQVQV 181
Query: 71 --EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 121
+ + + +++ H P+V I+ EI E A + A G +++ T H
Sbjct: 182 NEKAKMSYYDLLKVALRHHPDVFIIGEIRDELTAKTAVNAALSGHLVLSTVHA 234
>gi|170027981|ref|XP_001841875.1| replication factor C subunit 2 [Culex quinquefasciatus]
gi|167868345|gb|EDS31728.1| replication factor C subunit 2 [Culex quinquefasciatus]
Length = 344
Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 11 SILFVGRPGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 69
+I+ G PGVGKTT + +AR+ L + F++ V+ ++ SNE G D+ + I + +V
Sbjct: 63 NIIIAGPPGVGKTTTILCLARILLGENFREAVLELNASNERG--IDVVRNKIKMFAQQKV 120
Query: 70 PEPSLQHKVMIEAVENHMPE 89
P +HK++I + M E
Sbjct: 121 TLPRGRHKIVILDEADSMTE 140
>gi|335997578|ref|ZP_08563492.1| competence protein ComGA [Lactobacillus ruminis SPM0211]
gi|335350261|gb|EGM51758.1| competence protein ComGA [Lactobacillus ruminis SPM0211]
Length = 328
Score = 40.4 bits (93), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 17/113 (15%)
Query: 12 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP- 70
IL G G GKTT M E+AR ++D K+++ ++ E I R +QV
Sbjct: 136 ILLSGPMGSGKTTTMYELARKMTD---KQIMCIEDPVE-----------IAEPRFLQVQV 181
Query: 71 --EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 121
+ + + +++ H P+V I+ EI E A + A G +++ T H
Sbjct: 182 NEKAKMSYYDLLKVALRHHPDVFIIGEIRDELTAKTAVNAALSGHLVLSTVHA 234
>gi|347525904|ref|YP_004832652.1| ComG operon protein 1 [Lactobacillus ruminis ATCC 27782]
gi|345284863|gb|AEN78716.1| ComG operon protein 1 [Lactobacillus ruminis ATCC 27782]
Length = 328
Score = 40.4 bits (93), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 17/113 (15%)
Query: 12 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP- 70
IL G G GKTT M E+AR ++D K+++ ++ E I R +QV
Sbjct: 136 ILLSGPMGSGKTTTMYELARKMTD---KQIMCIEDPVE-----------IAEPRFLQVQV 181
Query: 71 --EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 121
+ + + +++ H P+V I+ EI E A + A G +++ T H
Sbjct: 182 NEKAKMSYYDLLKVALRHHPDVFIIGEIRDELTAKTAVNAALSGHLVLSTVHA 234
>gi|315640072|ref|ZP_07895197.1| competence protein [Enterococcus italicus DSM 15952]
gi|315484200|gb|EFU74671.1| competence protein [Enterococcus italicus DSM 15952]
Length = 289
Score = 40.4 bits (93), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 14/129 (10%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
+VYD+ + LF G G GKTT+M +A+ L + V+ ++ EI + P
Sbjct: 127 LVYDVANQNGLFLFSGATGSGKTTLMYHLAKKLGGQ----VITIEDPVEI----EEP--- 175
Query: 61 IGTARRMQVPEPSLQ-HKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 119
T ++Q + Q + +I+ H P+++++ EI AHA A G + T
Sbjct: 176 --TFLQLQTNDTIGQTYDQLIKLSLRHRPDLLLIGEIRDSLTAHAATRAALTGHQVFATV 233
Query: 120 HGEWLENII 128
H + E +
Sbjct: 234 HAKGQEETV 242
>gi|315652424|ref|ZP_07905412.1| conserved hypothetical protein [Lachnoanaerobaculum saburreum DSM
3986]
gi|315485323|gb|EFU75717.1| conserved hypothetical protein [Lachnoanaerobaculum saburreum DSM
3986]
Length = 341
Score = 40.0 bits (92), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 13/94 (13%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 69
KSI+F G GVGKT + IA+VL D + VI ++ E+ T ++ +
Sbjct: 200 KSIVFSGSTGVGKTYLSNCIAKVLLDRYYS--VIYLSAKEL----------FETLVKVNI 247
Query: 70 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAH 103
E S + K ++ A E + +++I+D++G+E H
Sbjct: 248 -EKSEEQKYLLLAKEVYECDMLIIDDLGSELFNH 280
>gi|428174860|gb|EKX43753.1| hypothetical protein GUITHDRAFT_140204 [Guillardia theta CCMP2712]
Length = 331
Score = 40.0 bits (92), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 12 ILFVGRPGVGKTTVMREIAR-VLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 70
+L G PG+GKTT + +AR +L D F++ V+ ++ S+E G D+ + I + +V
Sbjct: 48 LLLTGSPGIGKTTCVLALARELLGDSFKEGVLELNASDERG--IDVVRNKIKMFAQQKVT 105
Query: 71 EPSLQHKVMI 80
P +HK++I
Sbjct: 106 LPPGRHKIII 115
>gi|403165621|ref|XP_003325595.2| hypothetical protein PGTG_07428 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375165801|gb|EFP81176.2| hypothetical protein PGTG_07428 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 647
Score = 40.0 bits (92), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 8/68 (11%)
Query: 12 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVI--VDTSNEIGGD-----GDIPHSAIGTA 64
+L VG PGVGKT++ R IA+ L+ +F R+ + V +EI G G +P + +
Sbjct: 177 LLLVGPPGVGKTSIARSIAKALNKQFY-RISLGGVKDESEIRGHRRTYIGSMPGTIVQAL 235
Query: 65 RRMQVPEP 72
RR+ V +P
Sbjct: 236 RRVGVNDP 243
>gi|313123375|ref|YP_004033634.1| type ii secretory pathway/competence component, ATPase
[Lactobacillus delbrueckii subsp. bulgaricus ND02]
gi|312279938|gb|ADQ60657.1| Type II secretory pathway/competence component, ATPase
[Lactobacillus delbrueckii subsp. bulgaricus ND02]
Length = 323
Score = 40.0 bits (92), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 10/119 (8%)
Query: 4 DLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGT 63
DL I+ G G GKTT M E+AR LS K V+ ++ E+ +
Sbjct: 126 DLCWLRGMIVTSGPTGSGKTTTMYELARKLSQ--TKMVMTIEDPVEVYEESFFQAQVNAG 183
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 122
A + + +++A H P+V+I+ EI E AH A G +++ T H +
Sbjct: 184 A--------GISYASLLKAALRHRPDVLIIGEIRDEETAHLAVDAALSGHLVLATVHAK 234
>gi|149190958|ref|ZP_01869220.1| type II secretion system protein E [Vibrio shilonii AK1]
gi|148835201|gb|EDL52176.1| type II secretion system protein E [Vibrio shilonii AK1]
Length = 340
Score = 40.0 bits (92), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 12/125 (9%)
Query: 6 LHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTAR 65
+ GK+I+ G G GKTT++R +AR + + Q+RVV + + E+ D ++ + +
Sbjct: 150 IQEGKNIIVSGNTGSGKTTLLRALARYIPE--QERVVTCEDTQELYLDWLPFKVSMESPK 207
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R + ++ K +IEA P+ I V EI + A A + I T H +
Sbjct: 208 R---EDSDVEMKTLIEASLRMRPDRIWVGEIRKASAADAF-------LQAINTGHSGCMT 257
Query: 126 NIIKN 130
I N
Sbjct: 258 TIHSN 262
>gi|419718540|ref|ZP_14245857.1| IstB-like ATP-binding protein [Lachnoanaerobaculum saburreum F0468]
gi|383305375|gb|EIC96743.1| IstB-like ATP-binding protein [Lachnoanaerobaculum saburreum F0468]
Length = 341
Score = 40.0 bits (92), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 13/94 (13%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 69
KSI+F G GVGKT + IA+VL D + VI ++ E+ T ++ +
Sbjct: 200 KSIVFSGSTGVGKTYLSNCIAKVLLDRYYS--VIYLSAKEL----------FETLVKVNI 247
Query: 70 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAH 103
E S + K ++ A E + +++I+D++G+E H
Sbjct: 248 -EKSEEQKYLLLAKEVYECDMLIIDDLGSELFNH 280
>gi|291551185|emb|CBL27447.1| ATP-dependent protease La [Ruminococcus torques L2-14]
Length = 756
Score = 40.0 bits (92), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEF 37
M + YG +LFVG PG GKT++ + IAR L+ E+
Sbjct: 328 MALNRKQYGSILLFVGAPGTGKTSIGQSIARALNREY 364
>gi|47567804|ref|ZP_00238512.1| general secretion pathway protein E [Bacillus cereus G9241]
gi|47555481|gb|EAL13824.1| general secretion pathway protein E [Bacillus cereus G9241]
Length = 283
Score = 40.0 bits (92), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 20/141 (14%)
Query: 2 VYDLLHYGKSIL-FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
+ LHY +L F G G GKTT M + V+ + +R+V ++ E D +
Sbjct: 129 LLSFLHYSHGLLVFTGPTGSGKTTTMYALLEVIRKKKTRRIVTLEDPVEKRSDDLL---- 184
Query: 61 IGTARRMQVPEPS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 119
++Q+ E + + ++ ++A+ H P+VI+V EI E A + G +++ T
Sbjct: 185 -----QIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTL 239
Query: 120 H-----GEWLE----NIIKNP 131
H G L NI+K P
Sbjct: 240 HTNDARGAILHAHQLNILKYP 260
>gi|205374026|ref|ZP_03226826.1| required for exogenous DNA-binding (competence) [Bacillus
coahuilensis m4-4]
Length = 357
Score = 40.0 bits (92), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 12/112 (10%)
Query: 12 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIV-DTSNEIGGDGDIPHSAIGTARRMQVP 70
+L+ G G GKTT++ + + SD+ + V+ + D +I D ++QV
Sbjct: 140 LLYSGPTGSGKTTLLYTLVQYCSDQLHRHVITLEDPIEKINED----------FLQIQVN 189
Query: 71 E-PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 121
E + + ++A+ H P+VI+V EI E AH A G +++ T H
Sbjct: 190 ERAGMTYSNGLKAILRHDPDVIMVGEIRDEETAHIAVRAALSGHLVLSTIHS 241
>gi|158285610|ref|XP_308395.4| AGAP007477-PA [Anopheles gambiae str. PEST]
gi|157020075|gb|EAA04621.4| AGAP007477-PA [Anopheles gambiae str. PEST]
Length = 341
Score = 40.0 bits (92), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 11 SILFVGRPGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 69
+I+ G PGVGKTT + +AR+ L F++ V+ ++ SNE G D+ S I + +V
Sbjct: 60 NIIIAGPPGVGKTTTILCLARILLGPNFREAVLELNASNERG--IDVVRSKIKMFAQQKV 117
Query: 70 PEPSLQHKVMI 80
P +HK++I
Sbjct: 118 TLPRGRHKIVI 128
>gi|63086953|emb|CAI72282.1| Lon protease, putative [Phytophthora infestans]
Length = 930
Score = 40.0 bits (92), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 11/88 (12%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 68
GK I FVG PGVGKT++ + IAR L+ EF + V GG D+ + I RR
Sbjct: 458 GKIICFVGPPGVGKTSIGKSIARSLNREFYRFSV--------GGLSDV--AEIKGHRRTY 507
Query: 69 VPEPSLQHKVMIEAVENHMPEVIIVDEI 96
V + +++ ++ P +I++DEI
Sbjct: 508 VGAMPGKIIQCLKSTQSSNP-LILIDEI 534
>gi|167628704|ref|YP_001679203.1| type ii/iv secretion system protein [Heliobacterium modesticaldum
Ice1]
gi|410667092|ref|YP_006919463.1| type II secretion system protein E [Thermacetogenium phaeum DSM
12270]
gi|167591444|gb|ABZ83192.1| type ii/iv secretion system protein [Heliobacterium modesticaldum
Ice1]
gi|409104839|gb|AFV10964.1| type II secretion system protein E [Thermacetogenium phaeum DSM
12270]
Length = 483
Score = 40.0 bits (92), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 9/131 (6%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDT-SNEIG----GDGD 55
+ + L YG S+ G GKTTV + + D KR+ ++ S E+ DG
Sbjct: 237 FLAECLRYGISVCVAGATSSGKTTVAGWLLTTIPD--SKRIFTIENGSRELALVRKRDGK 294
Query: 56 IPHSAIGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVM 114
I +S I T R E ++ ++++ PEVI V E+ + +EA+A + A G
Sbjct: 295 IVNSVIHTLTRSSENEKQNIDQDMLLDMALRFNPEVICVGEMRS-SEAYAAQEAARTGHT 353
Query: 115 LIGTAHGEWLE 125
++ T H E
Sbjct: 354 VLTTIHSNSCE 364
>gi|366990501|ref|XP_003675018.1| hypothetical protein NCAS_0B05620 [Naumovozyma castellii CBS 4309]
gi|342300882|emb|CCC68646.1| hypothetical protein NCAS_0B05620 [Naumovozyma castellii CBS 4309]
Length = 1120
Score = 40.0 bits (92), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK I FVG PGVGKT++ + IAR L+ +F + V + D + EI G G +P I
Sbjct: 609 GKIICFVGPPGVGKTSIGKSIARALNRQFFRFSVGGMTDVA-EIKGHRRTYIGALPGRII 667
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 668 QALKKCQTQNP 678
>gi|320583837|gb|EFW98050.1| mitochondrial Lon protease [Ogataea parapolymorpha DL-1]
Length = 1108
Score = 40.0 bits (92), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 15/97 (15%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 68
GK I FVG PGVGKT++ + IAR L+ +F + V GG D+ + I RR
Sbjct: 582 GKIICFVGPPGVGKTSIGKSIARALNRKFYRFSV--------GGLTDV--AEIKGHRRTY 631
Query: 69 VPEPSLQHKVMIEAVENHMPE--VIIVDEIGTEAEAH 103
V M++A++N E ++++DEI + H
Sbjct: 632 V---GAIPGRMVQALKNTETENPLVLIDEIDKISHTH 665
>gi|301099514|ref|XP_002898848.1| lon protease, putative [Phytophthora infestans T30-4]
gi|262104554|gb|EEY62606.1| lon protease, putative [Phytophthora infestans T30-4]
Length = 807
Score = 40.0 bits (92), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 11/88 (12%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 68
GK I FVG PGVGKT++ + IAR L+ EF + V GG D+ + I RR
Sbjct: 458 GKIICFVGPPGVGKTSIGKSIARSLNREFYRFSV--------GGLSDV--AEIKGHRRTY 507
Query: 69 VPEPSLQHKVMIEAVENHMPEVIIVDEI 96
V + +++ ++ P +I++DEI
Sbjct: 508 VGAMPGKIIQCLKSTQSSNP-LILIDEI 534
>gi|153956471|ref|YP_001397236.1| hypothetical protein CKL_3888 [Clostridium kluyveri DSM 555]
gi|219856775|ref|YP_002473897.1| hypothetical protein CKR_3432 [Clostridium kluyveri NBRC 12016]
gi|146349329|gb|EDK35865.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
gi|219570499|dbj|BAH08483.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 450
Score = 40.0 bits (92), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDT-SNEIG----GDGD 55
++ + + YG S+ G GKTTV + + D KR+ ++ S E+ DG
Sbjct: 203 LLSEFIRYGISVCIAGATSSGKTTVAGWLLTTIPD--NKRIFTIENGSRELSLIREKDGR 260
Query: 56 IPHSAIGTARRMQVPEPSLQHKVMIEAVENHM---PEVIIVDEIGTEAEAHACRSIAERG 112
+ +S + T R E L I+ V+ + P++I+V E+ AEA+A + +A G
Sbjct: 261 VTNSVVHTLTRN--SENELYRIEQIDLVDISLRFNPDIIVVGEMRG-AEANAAQEVARTG 317
Query: 113 VMLIGTAHGEWLEN 126
V ++ T H E+
Sbjct: 318 VAVVTTIHSNSCES 331
>gi|91772319|ref|YP_565011.1| type II secretion system protein E [Methanococcoides burtonii DSM
6242]
gi|91711334|gb|ABE51261.1| type II secretion system protein E [Methanococcoides burtonii DSM
6242]
Length = 654
Score = 40.0 bits (92), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 22/167 (13%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 68
+S++F G GKTT M ++ + E ++V ++ + E+ P+ G R
Sbjct: 398 SRSLIFAGGTASGKTTAMNAVSTFIQPEM--KIVSIEDTRELNLAH--PNWIPGVTREAF 453
Query: 69 VPEP--SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 126
E S++ +++A PE I+V E+ AEA+ G T H + +++
Sbjct: 454 GGENKGSIEMYELLKAALRQRPEFILVGEVRG-AEAYVLFQAMSTGHTTFSTMHADSVQS 512
Query: 127 II---KNPILS---------DLIGGVDTVTLGDEEARARRCQKSILE 161
I+ +NP ++ D++ V +GDE R RRC KS+ E
Sbjct: 513 IVHRLENPPINVPRIMIQALDIVAIQAQVKVGDE--RVRRC-KSLTE 556
>gi|348679610|gb|EGZ19426.1| putative lon protease [Phytophthora sojae]
Length = 815
Score = 40.0 bits (92), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 11/88 (12%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 68
GK I FVG PGVGKT++ + IAR L+ EF + V GG D+ + I RR
Sbjct: 354 GKIICFVGPPGVGKTSIGKSIARSLNREFYRFSV--------GGLSDV--AEIKGHRRTY 403
Query: 69 VPEPSLQHKVMIEAVENHMPEVIIVDEI 96
V + +++ ++ P +I++DEI
Sbjct: 404 VGAMPGKIIQCLKSTQSSNP-LILIDEI 430
>gi|302387443|ref|YP_003823265.1| type II secretion system protein E [Clostridium saccharolyticum
WM1]
gi|302198071|gb|ADL05642.1| type II secretion system protein E [Clostridium saccharolyticum
WM1]
Length = 450
Score = 40.0 bits (92), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDT-SNEIG----GDGD 55
++ + + YG S+ G GKTTV + + D KR+ ++ S E+ DG
Sbjct: 203 LLSEFIRYGISVCIAGATSSGKTTVAGWLLTTIPD--NKRIFTIENGSRELSLIREKDGR 260
Query: 56 IPHSAIGTARRMQVPEPSLQHKVMIEAVENHM---PEVIIVDEIGTEAEAHACRSIAERG 112
+ +S + T R E L I+ V+ + P++I+V E+ AEA+A + +A G
Sbjct: 261 VTNSVVHTLTRN--SENELYRIEQIDLVDISLRFNPDIIVVGEM-RGAEANAAQEVARTG 317
Query: 113 VMLIGTAHGEWLEN 126
V ++ T H E+
Sbjct: 318 VAVVTTIHSNSCES 331
>gi|239614247|gb|EEQ91234.1| ATP-dependent protease La [Ajellomyces dermatitidis ER-3]
Length = 1081
Score = 40.0 bits (92), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 567 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRVI 625
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 626 QALKKCQTENP 636
>gi|261204417|ref|XP_002629422.1| ATP-dependent protease La [Ajellomyces dermatitidis SLH14081]
gi|239587207|gb|EEQ69850.1| ATP-dependent protease La [Ajellomyces dermatitidis SLH14081]
Length = 1081
Score = 40.0 bits (92), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 567 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRVI 625
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 626 QALKKCQTENP 636
>gi|327353723|gb|EGE82580.1| ATP-dependent protease La [Ajellomyces dermatitidis ATCC 18188]
Length = 1081
Score = 40.0 bits (92), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 567 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRVI 625
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 626 QALKKCQTENP 636
>gi|357037152|ref|ZP_09098952.1| type II secretion system protein E [Desulfotomaculum gibsoniae DSM
7213]
gi|355361317|gb|EHG09072.1| type II secretion system protein E [Desulfotomaculum gibsoniae DSM
7213]
Length = 474
Score = 40.0 bits (92), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 9/131 (6%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDT-SNEIG----GDGD 55
+ + L YG S+ G GKTT+ + + D KR+ ++ S E+ DG
Sbjct: 228 FLAECLRYGISVCVAGATSSGKTTLAGWLLTTIPD--NKRIFTIENGSRELALVRQKDGK 285
Query: 56 IPHSAIGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVM 114
+ +S I T RM E ++ ++++ PE+I V E+ EA+A + A G
Sbjct: 286 VCNSVIHTLTRMSENEKQNIDQDILLDMALRFNPEIICVGEM-RGPEAYAAQESARTGHT 344
Query: 115 LIGTAHGEWLE 125
++ T H E
Sbjct: 345 VLTTIHSNSCE 355
>gi|21674021|ref|NP_662086.1| DNA repair protein RadA [Chlorobium tepidum TLS]
gi|21647169|gb|AAM72428.1| DNA repair protein RadA [Chlorobium tepidum TLS]
Length = 456
Score = 40.0 bits (92), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 16/99 (16%)
Query: 6 LHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTAR 65
L +IL G PG+GK+T+M ++ L+ K+V+ V P+ AR
Sbjct: 86 LMEASAILVGGEPGIGKSTLMLQLVPRLAG---KKVLYVAGEES-------PNQIRERAR 135
Query: 66 RMQVPEPSLQ--HKVMIE----AVENHMPEVIIVDEIGT 98
R+ + P+L+ +V +E A+ N PE++IVD I T
Sbjct: 136 RLSIKAPNLRLVSEVALERILDAIANEQPEMVIVDSIQT 174
>gi|85067857|gb|ABC69312.1| mitochondrial Lon protease [Ogataea angusta]
Length = 1098
Score = 40.0 bits (92), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 15/97 (15%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 68
GK I FVG PGVGKT++ + IAR L+ +F + V GG D+ + I RR
Sbjct: 577 GKIICFVGPPGVGKTSIGKSIARALNRKFYRFSV--------GGLTDV--AEIKGHRRTY 626
Query: 69 VPEPSLQHKVMIEAVENHMPE--VIIVDEIGTEAEAH 103
V M++A++N E ++++DEI + H
Sbjct: 627 V---GAIPGRMVQALKNTETENPLVLIDEIDKISHTH 660
>gi|66934628|gb|AAY58903.1| putative LON protease [Hyaloperonospora parasitica]
Length = 725
Score = 40.0 bits (92), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK I FVG PGVGKT++ + IAR L+ EF
Sbjct: 456 GKIICFVGPPGVGKTSIGKSIARSLNREF 484
>gi|345304168|ref|YP_004826070.1| DNA repair protein RadA [Rhodothermus marinus SG0.5JP17-172]
gi|345113401|gb|AEN74233.1| DNA repair protein RadA [Rhodothermus marinus SG0.5JP17-172]
Length = 453
Score = 39.7 bits (91), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 16/96 (16%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 68
G IL G PG+GK+T+M E+AR L D +RV+ V + ARR+
Sbjct: 90 GSLILLAGDPGIGKSTLMTELARYLPD---RRVLYVTGEESV-------RQVRLRARRLG 139
Query: 69 VPEPSL------QHKVMIEAVENHMPEVIIVDEIGT 98
V +L + ++EA +P+V++VD I T
Sbjct: 140 VEGDNLLLLAETNLEAILEAARRVVPDVLVVDSIQT 175
>gi|342883829|gb|EGU84251.1| hypothetical protein FOXB_05208 [Fusarium oxysporum Fo5176]
Length = 1116
Score = 39.7 bits (91), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 600 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRMI 658
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 659 QALKKCQTENP 669
>gi|225679937|gb|EEH18221.1| ATP-dependent protease La [Paracoccidioides brasiliensis Pb03]
Length = 1073
Score = 39.7 bits (91), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 562 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYIGALPGRVI 620
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 621 QALKKCQTENP 631
>gi|50308831|ref|XP_454420.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74605886|sp|Q6CNR9.1|LONM_KLULA RecName: Full=Lon protease homolog, mitochondrial; Flags: Precursor
gi|49643555|emb|CAG99507.1| KLLA0E10407p [Kluyveromyces lactis]
Length = 1111
Score = 39.7 bits (91), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK I FVG PGVGKT++ + IAR L+ +F + V + D + EI G G +P I
Sbjct: 595 GKIICFVGPPGVGKTSIGKSIARSLNRQFFRFSVGGMTDVA-EIKGHRRTYIGALPGRVI 653
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 654 QALKKCQTQNP 664
>gi|14719366|gb|AAK73158.1| lon proteinase [Paracoccidioides brasiliensis]
Length = 1063
Score = 39.7 bits (91), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 561 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYIGALPGRVI 619
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 620 QALKKCQTENP 630
>gi|240282104|gb|EER45607.1| lon proteinase [Ajellomyces capsulatus H143]
Length = 1080
Score = 39.7 bits (91), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 567 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRVI 625
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 626 QALKKCQTENP 636
>gi|327298695|ref|XP_003234041.1| ATP-dependent protease La [Trichophyton rubrum CBS 118892]
gi|326464219|gb|EGD89672.1| ATP-dependent protease La [Trichophyton rubrum CBS 118892]
Length = 745
Score = 39.7 bits (91), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 237 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRII 295
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 296 QALKKCQTENP 306
>gi|431794356|ref|YP_007221261.1| stage III sporulation protein AA [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430784582|gb|AGA69865.1| stage III sporulation protein AA [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 349
Score = 39.7 bits (91), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 9/132 (6%)
Query: 13 LFVGRPGVGKTTVMREIARVLSD-----EFQKRVV-IVDTSNEIGGD-GDIPHSAIGTAR 65
L + P GKTT++R++ + +SD Q + V +VD E+ G IP +G
Sbjct: 180 LILSPPRAGKTTLLRDLIQKISDGSPTLHTQGQTVGVVDERRELAGMWQGIPAYNLGY-- 237
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
R + + + + + + P+VI VDE+G + A GV ++ TAH LE
Sbjct: 238 RTDILDGCPKRMGINMLIRSMSPQVIAVDELGHPEDVEAVLDALRTGVKILSTAHALNLE 297
Query: 126 NIIKNPILSDLI 137
+ P L L
Sbjct: 298 EALSRPTLRVLF 309
>gi|225559174|gb|EEH07457.1| lon proteinase [Ajellomyces capsulatus G186AR]
Length = 1080
Score = 39.7 bits (91), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 567 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRVI 625
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 626 QALKKCQTENP 636
>gi|407796223|ref|ZP_11143179.1| ComG operon protein 1 [Salimicrobium sp. MJ3]
gi|407019577|gb|EKE32293.1| ComG operon protein 1 [Salimicrobium sp. MJ3]
Length = 321
Score = 39.7 bits (91), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 10/112 (8%)
Query: 12 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 71
+LF G G GK+T + + +L+ + +++ ++ E G I ++QV E
Sbjct: 139 VLFTGPTGCGKSTTLYALMEILAQKGHLQLITLEDPVERSVPGVI---------QVQVNE 189
Query: 72 P-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 122
+ + ++A H P++IIV E+ EA AH A G ++ T H +
Sbjct: 190 KNAFDYNEGLKAALRHDPDIIIVGELRDEATAHFAVRAALSGHLVFSTLHAK 241
>gi|225713814|gb|ACO12753.1| Replication factor C subunit 2 [Lepeophtheirus salmonis]
Length = 325
Score = 39.7 bits (91), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 11 SILFVGRPGVGKTTVMREIAR-VLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 69
+I+ G PGVGKTT + +AR +L F++ V+ ++ SNE G D+ + I + +V
Sbjct: 45 NIIISGPPGVGKTTTILCLARALLGSSFKEAVLELNASNE--GGIDVVRNKIKMFAQQKV 102
Query: 70 PEPSLQHKVMIEAVENHMPEV 90
P +HK+++ + M E
Sbjct: 103 TLPPGRHKIIVLDEADSMTEA 123
>gi|226291713|gb|EEH47141.1| ATP-dependent protease La [Paracoccidioides brasiliensis Pb18]
Length = 1073
Score = 39.7 bits (91), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 562 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYIGALPGRVI 620
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 621 QALKKCQTENP 631
>gi|197301312|ref|ZP_03166397.1| hypothetical protein RUMLAC_00043 [Ruminococcus lactaris ATCC
29176]
gi|197299630|gb|EDY34145.1| endopeptidase La [Ruminococcus lactaris ATCC 29176]
Length = 755
Score = 39.7 bits (91), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEF 37
M + YG +LFVG PG GKT++ + IAR L E+
Sbjct: 327 MALNRKQYGSILLFVGAPGTGKTSIGQSIARALGREY 363
>gi|71906157|ref|YP_283744.1| ATPase AAA [Dechloromonas aromatica RCB]
gi|71845778|gb|AAZ45274.1| AAA ATPase, central region:ATPase associated with various cellular
activities, AAA_5 [Dechloromonas aromatica RCB]
Length = 301
Score = 39.7 bits (91), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLS-DEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 68
+ +L G PG GKT + E+AR L+ FQ V S G + A+ R Q
Sbjct: 48 RPLLIKGEPGTGKTLLAEEVARALNMPLFQWHV----KSTTKAQQGLYEYDAVSRLRDSQ 103
Query: 69 VPEPSLQ-------HKVMIEAVENHMPEVIIVDEI 96
+ +P ++ H V+ +A E P V+++DEI
Sbjct: 104 LGDPRVEDISHYIVHGVLWQAFECDEPSVVLIDEI 138
>gi|331224424|ref|XP_003324884.1| ATP-dependent protease La [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 757
Score = 39.7 bits (91), Expect = 0.88, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 25/131 (19%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK + VG PGVGKT++ + IAR L +F + V + D + EI G G +P I
Sbjct: 582 GKILCLVGPPGVGKTSIGKSIARALDRQFFRFSVGGLTDVA-EIKGHRRTYVGAMPGKVI 640
Query: 62 GTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 121
+ +++Q P +I++DEI + H + ML +
Sbjct: 641 QSLKKVQTENP-----------------LILIDEIDKVGKGHNGDPSSALLEMLDPEQNS 683
Query: 122 EWLENIIKNPI 132
+L++ I PI
Sbjct: 684 SFLDHYIDIPI 694
>gi|222097687|ref|YP_002531744.1| comg operon protein 1 [Bacillus cereus Q1]
gi|375286249|ref|YP_005106688.1| comG operon protein 1 [Bacillus cereus NC7401]
gi|221241745|gb|ACM14455.1| comG operon protein 1 [Bacillus cereus Q1]
gi|358354776|dbj|BAL19948.1| comG operon protein 1 [Bacillus cereus NC7401]
Length = 347
Score = 39.7 bits (91), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 11/121 (9%)
Query: 2 VYDLLHYGKSIL-FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
+ LHY +L F G G GKTT M + V+ + +R+V ++ E D +
Sbjct: 129 LLSFLHYSHGLLVFTGPTGSGKTTTMYALLEVIRKKKTRRIVTLEDPVEKRNDDVL---- 184
Query: 61 IGTARRMQVPEPS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 119
++Q+ E + + ++ ++A+ H P+VI+V EI E A + G +++ T
Sbjct: 185 -----QIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTL 239
Query: 120 H 120
H
Sbjct: 240 H 240
>gi|206978000|ref|ZP_03238886.1| comG operon protein 1 [Bacillus cereus H3081.97]
gi|206743800|gb|EDZ55221.1| comG operon protein 1 [Bacillus cereus H3081.97]
Length = 348
Score = 39.7 bits (91), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 11/121 (9%)
Query: 2 VYDLLHYGKSIL-FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
+ LHY +L F G G GKTT M + V+ + +R+V ++ E D +
Sbjct: 130 LLSFLHYSHGLLVFTGPTGSGKTTTMYALLEVIRKKKTRRIVTLEDPVEKRNDDVL---- 185
Query: 61 IGTARRMQVPEPS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 119
++Q+ E + + ++ ++A+ H P+VI+V EI E A + G +++ T
Sbjct: 186 -----QIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTL 240
Query: 120 H 120
H
Sbjct: 241 H 241
>gi|402082814|gb|EJT77832.1| lon protease like protein [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1092
Score = 39.7 bits (91), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 566 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRVI 624
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 625 QALKKCQTENP 635
>gi|325088244|gb|EGC41554.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 1059
Score = 39.7 bits (91), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 567 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRVI 625
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 626 QALKKCQTENP 636
>gi|295667187|ref|XP_002794143.1| ATP-dependent protease La [Paracoccidioides sp. 'lutzii' Pb01]
gi|226286249|gb|EEH41815.1| ATP-dependent protease La [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1073
Score = 39.7 bits (91), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 562 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRVI 620
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 621 QALKKCQTENP 631
>gi|408398130|gb|EKJ77264.1| hypothetical protein FPSE_02539 [Fusarium pseudograminearum CS3096]
Length = 1123
Score = 39.7 bits (91), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 604 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRMI 662
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 663 QALKKCQTENP 673
>gi|46123611|ref|XP_386359.1| hypothetical protein FG06183.1 [Gibberella zeae PH-1]
Length = 1086
Score = 39.7 bits (91), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 604 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRMI 662
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 663 QALKKCQTENP 673
>gi|258514752|ref|YP_003190974.1| type II secretion system protein E [Desulfotomaculum acetoxidans
DSM 771]
gi|257778457|gb|ACV62351.1| type II secretion system protein E [Desulfotomaculum acetoxidans
DSM 771]
Length = 474
Score = 39.7 bits (91), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 9/131 (6%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDT-SNEIG----GDGD 55
+ + L YG S+ G GKTT+ + + D KR+ ++ S E+ DG
Sbjct: 228 FLAECLRYGISVCVAGATSSGKTTLAGWLLTTIPDS--KRIFTIENGSRELALVRQKDGK 285
Query: 56 IPHSAIGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVM 114
+ +S I T RM E ++ ++++ PE+I V E+ EA+A + A G
Sbjct: 286 VCNSVIHTLTRMSENEKQNIDQDILLDMALRFNPEIICVGEM-RGPEAYAAQESARTGHT 344
Query: 115 LIGTAHGEWLE 125
++ T H E
Sbjct: 345 VLTTIHSNSCE 355
>gi|260821948|ref|XP_002606365.1| hypothetical protein BRAFLDRAFT_67608 [Branchiostoma floridae]
gi|229291706|gb|EEN62375.1| hypothetical protein BRAFLDRAFT_67608 [Branchiostoma floridae]
Length = 853
Score = 39.7 bits (91), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%), Gaps = 2/42 (4%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSN 48
G + FVG PGVGKT+V R IA++L EF + + +VD+S+
Sbjct: 370 GPILCFVGPPGVGKTSVGRSIAQILGREFHRISLGGVVDSSD 411
>gi|52141254|ref|YP_085575.1| competence protein ComG [Bacillus cereus E33L]
gi|51974723|gb|AAU16273.1| comG operon protein 1 [Bacillus cereus E33L]
Length = 347
Score = 39.7 bits (91), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 11/121 (9%)
Query: 2 VYDLLHYGKSIL-FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
+ LHY +L F G G GKTT M + V+ + +R+V ++ E D +
Sbjct: 129 LLSFLHYSHGLLVFTGPTGSGKTTTMYALLEVIRKKKTRRIVTLEDPVEKRSDDLL---- 184
Query: 61 IGTARRMQVPEPS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 119
++Q+ E + + ++ ++A+ H P+VI+V EI E A + G +++ T
Sbjct: 185 -----QIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTL 239
Query: 120 H 120
H
Sbjct: 240 H 240
>gi|374106289|gb|AEY95199.1| FABR139Wp [Ashbya gossypii FDAG1]
Length = 1326
Score = 39.7 bits (91), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 14/87 (16%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 69
+ +LF G PG GKT + R +A S E +K + DI +G A R
Sbjct: 405 RGVLFYGPPGTGKTLMARALAASCSTEKRKITFYMRKG------ADILSKWVGEAER--- 455
Query: 70 PEPSLQHKVMIEAVENHMPEVIIVDEI 96
Q +++ E + H P +I DEI
Sbjct: 456 -----QLRLLFEEAKKHQPSIIFFDEI 477
>gi|330718414|ref|ZP_08313014.1| hypothetical protein LfalK3_03223 [Leuconostoc fallax KCTC 3537]
Length = 263
Score = 39.7 bits (91), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 14/119 (11%)
Query: 6 LHYGKS--ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGT 63
LH +S LF G G GKTT M + LS +K V+ ++ EI +
Sbjct: 64 LHLPESGLFLFSGPTGSGKTTTMYRLLTCLS--LEKTVLTIEDPVEIQQSNFV------- 114
Query: 64 ARRMQVPEPS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 121
++QV E + + + +I+ H PEV+++ EI + A A A G +++ T H
Sbjct: 115 --QLQVNETAGMYYDDLIKVALRHRPEVLLIGEIRDKETAEAAIKAALSGHLVVSTIHA 171
>gi|302895269|ref|XP_003046515.1| hypothetical protein NECHADRAFT_66291 [Nectria haematococca mpVI
77-13-4]
gi|256727442|gb|EEU40802.1| hypothetical protein NECHADRAFT_66291 [Nectria haematococca mpVI
77-13-4]
Length = 1120
Score = 39.7 bits (91), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 599 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRMI 657
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 658 QALKKCQTENP 668
>gi|217961734|ref|YP_002340304.1| comG operon protein 1 [Bacillus cereus AH187]
gi|229140978|ref|ZP_04269522.1| ComG operon protein 1 [Bacillus cereus BDRD-ST26]
gi|229198372|ref|ZP_04325078.1| ComG operon protein 1 [Bacillus cereus m1293]
gi|423354739|ref|ZP_17332364.1| hypothetical protein IAU_02813 [Bacillus cereus IS075]
gi|423373877|ref|ZP_17351216.1| hypothetical protein IC5_02932 [Bacillus cereus AND1407]
gi|423570486|ref|ZP_17546731.1| hypothetical protein II7_03707 [Bacillus cereus MSX-A12]
gi|423574073|ref|ZP_17550192.1| hypothetical protein II9_01294 [Bacillus cereus MSX-D12]
gi|423604103|ref|ZP_17579996.1| hypothetical protein IIK_00684 [Bacillus cereus VD102]
gi|217067422|gb|ACJ81672.1| comG operon protein 1 [Bacillus cereus AH187]
gi|228585072|gb|EEK43184.1| ComG operon protein 1 [Bacillus cereus m1293]
gi|228642554|gb|EEK98841.1| ComG operon protein 1 [Bacillus cereus BDRD-ST26]
gi|401086287|gb|EJP94514.1| hypothetical protein IAU_02813 [Bacillus cereus IS075]
gi|401095278|gb|EJQ03338.1| hypothetical protein IC5_02932 [Bacillus cereus AND1407]
gi|401203682|gb|EJR10517.1| hypothetical protein II7_03707 [Bacillus cereus MSX-A12]
gi|401212642|gb|EJR19385.1| hypothetical protein II9_01294 [Bacillus cereus MSX-D12]
gi|401245789|gb|EJR52142.1| hypothetical protein IIK_00684 [Bacillus cereus VD102]
Length = 348
Score = 39.7 bits (91), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 11/121 (9%)
Query: 2 VYDLLHYGKSIL-FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
+ LHY +L F G G GKTT M + V+ + +R+V ++ E D +
Sbjct: 130 LLSFLHYSHGLLVFTGPTGSGKTTTMYALLEVIRKKKTRRIVTLEDPVEKRNDDVL---- 185
Query: 61 IGTARRMQVPEPS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 119
++Q+ E + + ++ ++A+ H P+VI+V EI E A + G +++ T
Sbjct: 186 -----QIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTL 240
Query: 120 H 120
H
Sbjct: 241 H 241
>gi|260822034|ref|XP_002606408.1| hypothetical protein BRAFLDRAFT_67659 [Branchiostoma floridae]
gi|229291749|gb|EEN62418.1| hypothetical protein BRAFLDRAFT_67659 [Branchiostoma floridae]
Length = 997
Score = 39.7 bits (91), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK + F G PGVGKT++ R IAR LS E+
Sbjct: 568 GKILCFYGPPGVGKTSIARSIARALSREY 596
>gi|21227723|ref|NP_633645.1| divalent cation transport protein [Methanosarcina mazei Go1]
gi|20906121|gb|AAM31317.1| divalent cation transport protein [Methanosarcina mazei Go1]
Length = 373
Score = 39.7 bits (91), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 69
K ++ G G GKTT ++ I+R LSD ++ +IV+ EIG DGD +S T R +
Sbjct: 20 KVMIIGGFLGSGKTTAIQRISRQLSDAGKRTAIIVNEIGEIGLDGDTLNSPGITTRELTS 79
Query: 70 PEPSLQHKVMIEAV-----ENHMPEVIIVDEIG 97
K+ ++ E P+++I++ G
Sbjct: 80 GCICCTLKISMQYTLQTLEEEFRPDIVIIEPTG 112
>gi|401626728|gb|EJS44653.1| pim1p [Saccharomyces arboricola H-6]
Length = 1138
Score = 39.7 bits (91), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK I FVG PGVGKT++ + IAR L+ +F + V + D + EI G G +P +
Sbjct: 628 GKIICFVGPPGVGKTSIGKSIARALNRKFFRFSVGGMTDVA-EIKGHRRTYIGALPGRVV 686
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 687 QALKKCQTQNP 697
>gi|228987492|ref|ZP_04147611.1| ComG operon protein 1 [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|228772224|gb|EEM20671.1| ComG operon protein 1 [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
Length = 348
Score = 39.7 bits (91), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 11/121 (9%)
Query: 2 VYDLLHYGKSIL-FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
+ LHY +L F G G GKTT M + V+ + +R+V ++ E D +
Sbjct: 130 LLSFLHYSHGLLVFTGPTGSGKTTTMYALLEVIRKKKTRRIVTLEDPVEKRSDDLL---- 185
Query: 61 IGTARRMQVPEPS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 119
++Q+ E + + ++ ++A+ H P+VI+V EI E A + G +++ T
Sbjct: 186 -----QIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTL 240
Query: 120 H 120
H
Sbjct: 241 H 241
>gi|402224887|gb|EJU04949.1| ATP-dependent protease La [Dacryopinax sp. DJM-731 SS1]
Length = 904
Score = 39.7 bits (91), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK I FVG PGVGKT++ + IAR L+ +F + V + D + EI G G +P I
Sbjct: 377 GKIICFVGPPGVGKTSIGKSIARALNRQFFRFSVGGLTDVA-EIKGHRRTYVGALPSKII 435
Query: 62 GTARRMQVPEP 72
+R+ P
Sbjct: 436 QALKRVGTENP 446
>gi|365767048|gb|EHN08536.1| Pim1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1133
Score = 39.7 bits (91), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK I FVG PGVGKT++ + IAR L+ +F + V + D + EI G G +P +
Sbjct: 625 GKIICFVGPPGVGKTSIGKSIARALNRKFFRFSVGGMTDVA-EIKGHRRTYIGALPGRVV 683
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 684 QALKKCQTQNP 694
>gi|367010564|ref|XP_003679783.1| hypothetical protein TDEL_0B04430 [Torulaspora delbrueckii]
gi|359747441|emb|CCE90572.1| hypothetical protein TDEL_0B04430 [Torulaspora delbrueckii]
Length = 1105
Score = 39.7 bits (91), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK + FVG PGVGKT++ + IAR L+ +F + V + D + EI G G +P I
Sbjct: 603 GKILCFVGPPGVGKTSIGKSIARSLNRQFFRFSVGGLTDVA-EIKGHRRTYIGALPGRVI 661
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 662 QALKKCQTQNP 672
>gi|302306714|ref|NP_983086.2| ABR139Wp [Ashbya gossypii ATCC 10895]
gi|299788650|gb|AAS50910.2| ABR139Wp [Ashbya gossypii ATCC 10895]
Length = 1326
Score = 39.7 bits (91), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 14/87 (16%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 69
+ +LF G PG GKT + R +A S E +K + DI +G A R
Sbjct: 405 RGVLFYGPPGTGKTLMARALAASCSTEKRKITFYMRKG------ADILSKWVGEAER--- 455
Query: 70 PEPSLQHKVMIEAVENHMPEVIIVDEI 96
Q +++ E + H P +I DEI
Sbjct: 456 -----QLRLLFEEAKKHQPSIIFFDEI 477
>gi|151946373|gb|EDN64595.1| ATP-dependent protease [Saccharomyces cerevisiae YJM789]
gi|190408847|gb|EDV12112.1| ATP-dependent protease [Saccharomyces cerevisiae RM11-1a]
gi|207347833|gb|EDZ73885.1| YBL022Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256269260|gb|EEU04582.1| Pim1p [Saccharomyces cerevisiae JAY291]
gi|259144824|emb|CAY77763.1| Pim1p [Saccharomyces cerevisiae EC1118]
gi|323334752|gb|EGA76125.1| Pim1p [Saccharomyces cerevisiae AWRI796]
gi|323338803|gb|EGA80018.1| Pim1p [Saccharomyces cerevisiae Vin13]
Length = 1133
Score = 39.7 bits (91), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK I FVG PGVGKT++ + IAR L+ +F + V + D + EI G G +P +
Sbjct: 625 GKIICFVGPPGVGKTSIGKSIARALNRKFFRFSVGGMTDVA-EIKGHRRTYIGALPGRVV 683
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 684 QALKKCQTQNP 694
>gi|402555621|ref|YP_006596892.1| competence protein ComG [Bacillus cereus FRI-35]
gi|401796831|gb|AFQ10690.1| competence protein ComG [Bacillus cereus FRI-35]
Length = 347
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 11/121 (9%)
Query: 2 VYDLLHYGKSIL-FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
+ LHY +L F G G GKTT M + V+ + +R+V ++ E D +
Sbjct: 129 LLSFLHYSHGLLVFTGPTGSGKTTTMYALLEVIRKKKTRRIVTLEDPVEKRNDDVL---- 184
Query: 61 IGTARRMQVPEPS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 119
++Q+ E + + ++ ++A+ H P+VI+V EI E A + G +++ T
Sbjct: 185 -----QIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTL 239
Query: 120 H 120
H
Sbjct: 240 H 240
>gi|393221570|gb|EJD07055.1| ATP-dependent protease La [Fomitiporia mediterranea MF3/22]
Length = 1108
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 19/128 (14%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 68
GK + FVG PGVGKT++ + IAR L+ +F + +GG DI + I RR
Sbjct: 590 GKILCFVGPPGVGKTSIGKSIARALNRQFFRF--------SVGGLTDI--AEIKGHRRTY 639
Query: 69 VPEPSLQHKVM--IEAVENHMPEVII--VDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 124
V +L K++ ++ V P V+I VD+IG ++ E ML + +L
Sbjct: 640 V--GALPSKIIQALKRVGTENPLVLIDEVDKIGKGYNGDPASALLE---MLDPEQNSAFL 694
Query: 125 ENIIKNPI 132
++ + P+
Sbjct: 695 DHYMDVPV 702
>gi|322706678|gb|EFY98258.1| ATP-dependent protease La [Metarhizium anisopliae ARSEF 23]
Length = 1124
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 597 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRII 655
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 656 QALKKCQTENP 666
>gi|322700953|gb|EFY92705.1| ATP-dependent protease La [Metarhizium acridum CQMa 102]
Length = 1118
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 597 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRII 655
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 656 QALKKCQTENP 666
>gi|353236783|emb|CCA68770.1| probable PIM1-ATP-dependent protease, mitochondrial [Piriformospora
indica DSM 11827]
Length = 1108
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK I FVG PGVGKT++ + IAR L+ +F + V + D + EI G G +P I
Sbjct: 604 GKIICFVGPPGVGKTSIGKSIARALNRQFFRFSVGGLTDVA-EIKGHRRTYVGALPSKII 662
Query: 62 GTARRMQVPEP 72
+R+ P
Sbjct: 663 QALKRVGTENP 673
>gi|323356263|gb|EGA88067.1| Pim1p [Saccharomyces cerevisiae VL3]
Length = 1133
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK I FVG PGVGKT++ + IAR L+ +F + V + D + EI G G +P +
Sbjct: 625 GKIICFVGPPGVGKTSIGKSIARALNRKFFRFSVGGMTDVA-EIKGHRRTYIGALPGRVV 683
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 684 QALKKCQTQNP 694
>gi|291525762|emb|CBK91349.1| Flp pilus assembly protein, ATPase CpaF [Eubacterium rectale DSM
17629]
Length = 452
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 4 DLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDT-SNEIG----GDGDIPH 58
+ L YG SI G GKTT+ + + D KR+ ++ S E+ DG + +
Sbjct: 208 ECLRYGISICVAGATSSGKTTLAGWLLTTIPD--NKRIFTIENGSRELALVREKDGKVTN 265
Query: 59 SAIGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIG 117
S I T R E ++ ++++ PE+I V E+ + +EA+ + A G ++
Sbjct: 266 SVIHTLTRFSENEKQNIDQDMLLDMALRFNPEIICVGEMRS-SEAYTAQESARTGHTVLT 324
Query: 118 TAHGEWLEN 126
T H E+
Sbjct: 325 TIHSNSCES 333
>gi|443921317|gb|ELU41011.1| ATP-dependent protease La [Rhizoctonia solani AG-1 IA]
Length = 1092
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK I FVG PGVGKT++ + IAR L+ +F
Sbjct: 584 GKIICFVGPPGVGKTSIGKSIARALNRQF 612
>gi|393238425|gb|EJD45962.1| ATP-dependent protease La [Auricularia delicata TFB-10046 SS5]
Length = 1065
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK I FVG PGVGKT++ + IAR L+ +F
Sbjct: 550 GKIICFVGPPGVGKTSIGKSIARALNRQF 578
>gi|403164811|ref|XP_003890125.1| lon-like ATP-dependent protease [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375165321|gb|EHS62890.1| lon-like ATP-dependent protease [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1189
Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 25/131 (19%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK + VG PGVGKT++ + IAR L +F + V + D + EI G G +P I
Sbjct: 729 GKILCLVGPPGVGKTSIGKSIARALDRQFFRFSVGGLTDVA-EIKGHRRTYVGAMPGKVI 787
Query: 62 GTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 121
+ +++Q P +I++DEI + H + ML +
Sbjct: 788 QSLKKVQTENP-----------------LILIDEIDKVGKGHNGDPSSALLEMLDPEQNS 830
Query: 122 EWLENIIKNPI 132
+L++ I PI
Sbjct: 831 SFLDHYIDIPI 841
>gi|346324680|gb|EGX94277.1| ATP-dependent protease La [Cordyceps militaris CM01]
Length = 1253
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 742 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRII 800
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 801 QALKKCQTENP 811
>gi|326472526|gb|EGD96535.1| lon proteinase [Trichophyton tonsurans CBS 112818]
Length = 819
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 311 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRII 369
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 370 QALKKCQTENP 380
>gi|342320667|gb|EGU12606.1| Lon protease [Rhodotorula glutinis ATCC 204091]
Length = 1226
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 19/128 (14%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 68
GK + FVG PGVGKT++ + IAR L +F + V GG D+ + I RR
Sbjct: 683 GKILCFVGPPGVGKTSIGKSIARALDRQFFRFSV--------GGLSDV--AEIKGHRRTY 732
Query: 69 VPEPSLQHKVM--IEAVENHMPEVII--VDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 124
V ++ K++ ++ V+ P V+I VD+IG ++ E ML + ++L
Sbjct: 733 V--GAMPGKIIQALKKVQTENPLVLIDEVDKIGRGHNGDPSSALLE---MLDPEQNAQFL 787
Query: 125 ENIIKNPI 132
++ + P+
Sbjct: 788 DHYLDVPV 795
>gi|219848638|ref|YP_002463071.1| type II secretion system protein E [Chloroflexus aggregans DSM
9485]
gi|219542897|gb|ACL24635.1| type II secretion system protein E [Chloroflexus aggregans DSM
9485]
Length = 401
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 11/138 (7%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
++ L+ G S+L G G GKTT+ + + + R+V+++ G++PHSA
Sbjct: 184 LLLAALNGGASVLIAGPTGSGKTTLAAALTQAIGTRM--RLVVIEDG------GELPHSA 235
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
+ ++ P + + P IIV E+ EA A A G +GT H
Sbjct: 236 --NSLHIEAPAETGGFSRAVTFALRQKPNYIIVGEV-RGGEAMAMLQAAATGHPGLGTIH 292
Query: 121 GEWLENIIKNPILSDLIG 138
++ ++N LIG
Sbjct: 293 AATVQGALRNLERMALIG 310
>gi|6319449|ref|NP_009531.1| Pim1p [Saccharomyces cerevisiae S288c]
gi|585414|sp|P36775.2|LONM_YEAST RecName: Full=Lon protease homolog, mitochondrial; Flags: Precursor
gi|453236|emb|CAA52634.1| mitochondrial ATP-dependent protease [Saccharomyces cerevisiae]
gi|536019|emb|CAA84841.1| PIM1 [Saccharomyces cerevisiae]
gi|285810313|tpg|DAA07098.1| TPA: Pim1p [Saccharomyces cerevisiae S288c]
gi|392301197|gb|EIW12286.1| Pim1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1133
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK I FVG PGVGKT++ + IAR L+ +F + V + D + EI G G +P +
Sbjct: 625 GKIICFVGPPGVGKTSIGKSIARALNRKFFRFSVGGMTDVA-EIKGHRRTYIGALPGRVV 683
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 684 QALKKCQTQNP 694
>gi|358393924|gb|EHK43325.1| hypothetical protein TRIATDRAFT_294380 [Trichoderma atroviride IMI
206040]
Length = 1115
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 598 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRII 656
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 657 QALKKCQTENP 667
>gi|349576359|dbj|GAA21530.1| K7_Pim1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1133
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK I FVG PGVGKT++ + IAR L+ +F + V + D + EI G G +P +
Sbjct: 625 GKIICFVGPPGVGKTSIGKSIARALNRKFFRFSVGGMTDVA-EIKGHRRTYIGALPGRVV 683
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 684 QALKKCQTQNP 694
>gi|281348020|gb|EFB23604.1| hypothetical protein PANDA_017625 [Ailuropoda melanoleuca]
Length = 885
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK + F G PGVGKT++ R IAR LS E+
Sbjct: 442 GKILCFYGPPGVGKTSIARSIARALSREY 470
>gi|301784761|ref|XP_002927796.1| PREDICTED: lon protease homolog, mitochondrial-like [Ailuropoda
melanoleuca]
Length = 910
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK + F G PGVGKT++ R IAR LS E+
Sbjct: 467 GKILCFYGPPGVGKTSIARSIARALSREY 495
>gi|454438|gb|AAA53625.1| LON gene of S. cerevisiae is downstream of the HAP 3 gene; Putative
ATP-binding motif bp 1960 to bp 1986.; Putative
catalytic site serine of serine proteases from bp 3109
to bp 3111 [Saccharomyces cerevisiae]
Length = 1133
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK I FVG PGVGKT++ + IAR L+ +F + V + D + EI G G +P +
Sbjct: 625 GKIICFVGPPGVGKTSIGKSIARALNRKFFRFSVGGMTDVA-EIKGHRRTYIGALPGRVV 683
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 684 QALKKCQTQNP 694
>gi|403172897|ref|XP_003332028.2| ATP-dependent protease La [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375170043|gb|EFP87609.2| ATP-dependent protease La [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1188
Score = 39.3 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 25/131 (19%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK + VG PGVGKT++ + IAR L +F + V + D + EI G G +P I
Sbjct: 636 GKILCLVGPPGVGKTSIGKSIARALDRQFFRFSVGGLTDVA-EIKGHRRTYVGAMPGKVI 694
Query: 62 GTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 121
+ +++Q P +I++DEI + H + ML +
Sbjct: 695 QSLKKVQTENP-----------------LILIDEIDKVGKGHNGDPSSALLEMLDPEQNS 737
Query: 122 EWLENIIKNPI 132
+L++ I PI
Sbjct: 738 SFLDHYIDIPI 748
>gi|379005716|ref|YP_005261388.1| Type IV secretory pathway VirB11 component [Pyrobaculum oguniense
TE7]
gi|375161169|gb|AFA40781.1| Type IV secretory pathway VirB11 component [Pyrobaculum oguniense
TE7]
Length = 343
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 12/124 (9%)
Query: 6 LHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTAR 65
L G+ ++ G PG GKTT++ I ++ Q+ V +D ++E D +
Sbjct: 197 LREGRHVVVSGPPGSGKTTLLAAIDDLIPPHLQR--VYIDEADEFEDDPN---------- 244
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
+ Q+ S+ + A N +VI + E+ E A R+ +E G+ + T H +E
Sbjct: 245 KNQIKIRSVNKAKEVLASLNRNIDVIFIGELQYEEHFAAFRTASELGLQTLATMHATSVE 304
Query: 126 NIIK 129
+ K
Sbjct: 305 DAQK 308
>gi|431793688|ref|YP_007220593.1| Flp pilus assembly protein, ATPase CpaF [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430783914|gb|AGA69197.1| Flp pilus assembly protein, ATPase CpaF [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 487
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 9/131 (6%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDT-SNEIG----GDGD 55
+ + L YG SI G GKTT+ + + D KR+ ++ S E+ DG
Sbjct: 240 FLSECLRYGISICVAGATSSGKTTLAGWLLTTIPD--NKRIFTIENGSRELALVRQDDGM 297
Query: 56 IPHSAIGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVM 114
+ +S I T RM E ++ ++++ PE+I V E+ EA+A + A G
Sbjct: 298 VCNSVIHTLTRMSENEKQNIDQDILLDMALRFNPEIICVGEM-RGPEAYAAQESARTGHT 356
Query: 115 LIGTAHGEWLE 125
++ T H E
Sbjct: 357 VLTTIHSNSCE 367
>gi|229163189|ref|ZP_04291144.1| ComG operon protein 1 [Bacillus cereus R309803]
gi|228620252|gb|EEK77123.1| ComG operon protein 1 [Bacillus cereus R309803]
Length = 348
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 11/121 (9%)
Query: 2 VYDLLHYGKSIL-FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
+ LHY +L F G G GKTT M + V+ + +R+V ++ E D +
Sbjct: 130 LLSFLHYSHGLLVFTGPTGSGKTTTMYALLEVIRKKKTRRIVTLEDPVEKRNDDLL---- 185
Query: 61 IGTARRMQVPEPS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 119
++Q+ E + + ++ ++A+ H P+VI+V EI E A + G +++ T
Sbjct: 186 -----QIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTL 240
Query: 120 H 120
H
Sbjct: 241 H 241
>gi|358384574|gb|EHK22171.1| hypothetical protein TRIVIDRAFT_230449 [Trichoderma virens Gv29-8]
Length = 1137
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 620 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRII 678
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 679 QALKKCQTENP 689
>gi|340521762|gb|EGR51996.1| predicted protein [Trichoderma reesei QM6a]
Length = 1074
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 590 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRII 648
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 649 QALKKCQTENP 659
>gi|297808717|ref|XP_002872242.1| hypothetical protein ARALYDRAFT_489519 [Arabidopsis lyrata subsp.
lyrata]
gi|297318079|gb|EFH48501.1| hypothetical protein ARALYDRAFT_489519 [Arabidopsis lyrata subsp.
lyrata]
Length = 991
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 11/96 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 68
GK I G PGVGKT++ R IAR L+ +F + V GG GD+ + I RR
Sbjct: 508 GKIICLSGPPGVGKTSIGRSIARALNRKFFRFSV--------GGLGDV--AEIKGHRRTY 557
Query: 69 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHA 104
V + +++V P ++++DEI HA
Sbjct: 558 VGAMPGKMVQCLKSVGTANP-LVLIDEIDKLGRGHA 592
>gi|423400907|ref|ZP_17378080.1| hypothetical protein ICW_01305 [Bacillus cereus BAG2X1-2]
gi|423478388|ref|ZP_17455103.1| hypothetical protein IEO_03846 [Bacillus cereus BAG6X1-1]
gi|401653897|gb|EJS71440.1| hypothetical protein ICW_01305 [Bacillus cereus BAG2X1-2]
gi|402428550|gb|EJV60647.1| hypothetical protein IEO_03846 [Bacillus cereus BAG6X1-1]
Length = 348
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 11/121 (9%)
Query: 2 VYDLLHYGKSIL-FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
+ LHY +L F G G GKTT M + V+ + +R+V ++ E D +
Sbjct: 130 LLSFLHYSHGLLVFTGPTGSGKTTTMYALLEVIKKKKTRRIVTLEDPVEKRNDDVL---- 185
Query: 61 IGTARRMQVPEPS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 119
++Q+ E + + ++ ++A+ H P++I+V EI E A + G +++ T
Sbjct: 186 -----QIQINEKAGITYEAGLKAILRHDPDIILVGEIRDEETAKIAIRASLTGHLVMTTL 240
Query: 120 H 120
H
Sbjct: 241 H 241
>gi|307179094|gb|EFN67566.1| Replication factor C subunit 2 [Camponotus floridanus]
Length = 349
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 11 SILFVGRPGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 69
+I+ G PGVGKTT + +AR+ L F++ V+ ++ SNE G D+ + I + +V
Sbjct: 71 NIIIAGPPGVGKTTTILCLARILLGPAFKEAVLELNASNERG--IDVVRNKIKMFAQKKV 128
Query: 70 PEPSLQHKVMI 80
P +HK++I
Sbjct: 129 NLPKGKHKIII 139
>gi|268317889|ref|YP_003291608.1| DNA repair protein RadA [Rhodothermus marinus DSM 4252]
gi|262335423|gb|ACY49220.1| DNA repair protein RadA [Rhodothermus marinus DSM 4252]
Length = 453
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 16/96 (16%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 68
G IL G PG+GK+T+M E+AR L D +RV+ V + ARR+
Sbjct: 90 GSLILLAGDPGIGKSTLMTELARYLPD---RRVLYVTGEESV-------RQVRLRARRLG 139
Query: 69 VPEPSL------QHKVMIEAVENHMPEVIIVDEIGT 98
V +L + ++EA P+V++VD I T
Sbjct: 140 VEGDNLLLLAETNLEAILEAARRVAPDVLVVDSIQT 175
>gi|428775103|ref|YP_007166890.1| twitching motility protein [Halothece sp. PCC 7418]
gi|428689382|gb|AFZ42676.1| twitching motility protein [Halothece sp. PCC 7418]
Length = 430
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 56/118 (47%), Gaps = 6/118 (5%)
Query: 4 DLLHYGKSILFVGRP-GVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIG 62
D+ HY K ++ V P G GK+T + + ++ E K ++ ++ E + S
Sbjct: 195 DICHYHKGMILVTGPTGSGKSTTLAAMVDYINQEMPKHIITIEDPIEF-----VHQSQRA 249
Query: 63 TARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
R+ +V +L+ ++A P+VI++ E+ A + A+ G +++GT H
Sbjct: 250 LIRQREVGMHTLEFDHALKASLREDPDVILIGEMRDRATVNTALKAAQTGHVVMGTLH 307
>gi|55821837|ref|YP_140279.1| late competence protein, ABC transporter subunit [Streptococcus
thermophilus LMG 18311]
gi|55823753|ref|YP_142194.1| late competence protein ABC transporter subunit [Streptococcus
thermophilus CNRZ1066]
gi|55737822|gb|AAV61464.1| late competence protein, ABC transporter subunit [Streptococcus
thermophilus LMG 18311]
gi|55739738|gb|AAV63379.1| late competence protein, ABC transporter subunit [Streptococcus
thermophilus CNRZ1066]
Length = 313
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 18/146 (12%)
Query: 2 VYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQ-KRVVIVDTSNEIGGDGDIPHSA 60
+ D L Y LF G G GKTT+M E+ + + F+ ++V+ ++ EI D
Sbjct: 125 IKDALDYRGLYLFAGPVGSGKTTLMHELVQ---ERFKGQQVISIEDPVEIKQD------- 174
Query: 61 IGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 119
++QV + + + +I+ H P+V+I+ EI + A A + GV ++ T
Sbjct: 175 --NVLQLQVNQAIDMNYDSLIKLSLRHRPDVLIIGEIRDKETARAVIRASLTGVTVLSTI 232
Query: 120 HGEWLENIIKNPILSDLIGGVDTVTL 145
H + + + + L DL GVD L
Sbjct: 233 HAKSIAGVYER--LLDL--GVDKSEL 254
>gi|332016496|gb|EGI57389.1| Replication factor C subunit 2 [Acromyrmex echinatior]
Length = 355
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 11 SILFVGRPGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 69
+I+ G PGVGKTT + +AR+ L F++ V+ ++ SNE G D+ + I + +V
Sbjct: 75 NIIIAGPPGVGKTTTILCLARILLGPAFKEAVLELNASNERG--IDVVRNKIKMFAQKKV 132
Query: 70 PEPSLQHKVMI 80
P +HK++I
Sbjct: 133 NLPKGKHKIII 143
>gi|193212788|ref|YP_001998741.1| DNA repair protein RadA [Chlorobaculum parvum NCIB 8327]
gi|193086265|gb|ACF11541.1| DNA repair protein RadA [Chlorobaculum parvum NCIB 8327]
Length = 456
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 16/99 (16%)
Query: 6 LHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTAR 65
L +IL G PG+GK+T+M ++ L+ K+V+ V P+ AR
Sbjct: 86 LMEASAILVGGEPGIGKSTLMIQLVPRLAG---KKVLYVAGEES-------PNQIRERAR 135
Query: 66 RMQVPEPSLQ--HKVMIE----AVENHMPEVIIVDEIGT 98
R+ + P+L+ +V +E A+ N PE++IVD I T
Sbjct: 136 RLSIKAPNLRLVSEVALERILDAIANEQPEMVIVDSIQT 174
>gi|403668178|ref|ZP_10933455.1| hypothetical protein KJC8E_05271 [Kurthia sp. JC8E]
Length = 360
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 27/155 (17%)
Query: 5 LLHYGKSILF--VGRPGVGKTTVMREIARVLSDEFQKRVVI-VDTSNEIGGDGDIPHSAI 61
L H GKSI G PG GK+T + ++L D+ K V+ +D S+ I G S +
Sbjct: 80 LPHTGKSIRIGITGVPGAGKSTFIETFGKMLCDQGHKVAVLAIDPSSSITGG-----SIL 134
Query: 62 GTARRMQV----------PEPSLQ-----HKVMIEAV---ENHMPEVIIVDEIGTEAEAH 103
G RM+ P PS H+ E + E +VI+++ +G
Sbjct: 135 GDKTRMEELSREKNAFIRPSPSAGTLGGVHRKTRETMLLCEAAGYDVILIETVGVGQSET 194
Query: 104 ACRSIAERGVMLIGTAHGEWLENIIKNPI-LSDLI 137
A R++ + ++L+ T G+ L+ + K + L+D I
Sbjct: 195 AVRNMVDFFLLLVLTGAGDELQGMKKGIMELADAI 229
>gi|350270772|ref|YP_004882080.1| stage III sporulation protein AA [Oscillibacter valericigenes
Sjm18-20]
gi|348595614|dbj|BAK99574.1| stage III sporulation protein AA [Oscillibacter valericigenes
Sjm18-20]
Length = 301
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 61/143 (42%), Gaps = 12/143 (8%)
Query: 1 MVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIG----GDG 54
+ LL G+ S L + PG GKTT++R++ R +S RV + D E+ G
Sbjct: 139 LCQRLLSGGEINSTLLLSPPGGGKTTLLRDLIRCVSQR-GFRVGLADERGEVAVCYRGK- 196
Query: 55 DIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVM 114
P +G + P M+ N P+++ DEI E + A A GV
Sbjct: 197 --PQMDVGPCTDVLDGCPKAIAIPMLLRTMN--PQIVAADEITAEEDIRAMTMAAGCGVK 252
Query: 115 LIGTAHGEWLENIIKNPILSDLI 137
L+ T H + + P+ + L+
Sbjct: 253 LLATVHAANAAELTQKPLYARLL 275
>gi|307209915|gb|EFN86693.1| Replication factor C subunit 2 [Harpegnathos saltator]
Length = 351
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 11 SILFVGRPGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 69
+I+ G PGVGKTT + +AR+ L F++ V+ ++ SNE G D+ + I + +V
Sbjct: 71 NIIIAGPPGVGKTTTILCLARILLGPAFKEAVLELNASNERG--IDVVRNKIKMFAQKKV 128
Query: 70 PEPSLQHKVMI 80
P +HK++I
Sbjct: 129 NLPKGKHKIII 139
>gi|296411936|ref|XP_002835684.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629473|emb|CAZ79841.1| unnamed protein product [Tuber melanosporum]
Length = 1073
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK I FVG PGVGKT++ + IAR L+ +F
Sbjct: 557 GKIICFVGPPGVGKTSIGKSIARALNRQF 585
>gi|400599206|gb|EJP66910.1| ATP-dependent protease La [Beauveria bassiana ARSEF 2860]
Length = 1119
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 608 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRII 666
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 667 QALKKCQTENP 677
>gi|358458972|ref|ZP_09169176.1| AAA ATPase central domain protein [Frankia sp. CN3]
gi|357077781|gb|EHI87236.1| AAA ATPase central domain protein [Frankia sp. CN3]
Length = 650
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 19/96 (19%)
Query: 3 YDLLHYGKSILFVGRPGVGKTTVMREIARVLSDE--FQKRVVIVDTSNEIGGDGDIPHSA 60
Y + + ++F G PG GKTTV R AR+L++ Q+ V + +S+ + G+ H+
Sbjct: 45 YKVGFEAQHLVFAGPPGTGKTTVARIFARLLAEMGVVQRAVPVEVSSDSLVGE----HAG 100
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEI 96
GT R ++EA E V+ +DEI
Sbjct: 101 SGTRR-------------LVEAFEKAQGGVLFLDEI 123
>gi|384263212|ref|YP_005418400.1| ABC transporter [Rhodospirillum photometricum DSM 122]
gi|378404314|emb|CCG09430.1| ABC transporter component [Rhodospirillum photometricum DSM 122]
Length = 221
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 15/109 (13%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 68
G+S VG G GK+TV+R + + D S +GG S ARR+Q
Sbjct: 31 GESFGLVGNSGCGKSTVLRALVGLAPDW--------SGSVRLGGVAPSDLSPKALARRVQ 82
Query: 69 V----PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGV 113
+ P SL + V+ + E +++ +G E +A CR++A+ G+
Sbjct: 83 MVFQDPYGSLHPR---HTVDQALSEPLLIHGLGRERDARVCRALADVGL 128
>gi|283768971|ref|ZP_06341877.1| endopeptidase La [Bulleidia extructa W1219]
gi|283104328|gb|EFC05705.1| endopeptidase La [Bulleidia extructa W1219]
Length = 760
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 2 VYDLLH--YGKSILFVGRPGVGKTTVMREIARVLSDEF 37
V DL H G +LFVG PG GKT+V + IAR L+ E+
Sbjct: 329 VMDLNHKQSGSILLFVGAPGTGKTSVGKSIARALNREY 366
>gi|374708661|ref|ZP_09713095.1| competence protein comGA [Sporolactobacillus inulinus CASD]
Length = 363
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 11/122 (9%)
Query: 2 VYDLLHYGKSILFVGRP-GVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
+ LL Y ++ + P G GKTT + I L F+ RV+ ++ E D +
Sbjct: 133 LCSLLSYDSGLILISGPTGSGKTTTLYSILSTLQRRFRGRVITIEDPIEKKNDAFV---- 188
Query: 61 IGTARRMQVPEPS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 119
+M+V E + + A+ H P++I++ EI E A A G +++ T
Sbjct: 189 -----QMEVNEKAHFTYAEGFRALLRHDPDIIMIGEIRDEETARIAIRAALSGHLVLSTV 243
Query: 120 HG 121
H
Sbjct: 244 HA 245
>gi|255038517|ref|YP_003089138.1| DNA repair protein RadA [Dyadobacter fermentans DSM 18053]
gi|254951273|gb|ACT95973.1| DNA repair protein RadA [Dyadobacter fermentans DSM 18053]
Length = 457
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 18/97 (18%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGT-ARRM 67
G +L G PG+GK+T+M +IA LS+ KRV+ V G+ + I A RM
Sbjct: 90 GSLVLIGGEPGIGKSTLMLQIALTLSN---KRVLYV--------SGEESEAQIKMRAERM 138
Query: 68 QVPEPSL------QHKVMIEAVENHMPEVIIVDEIGT 98
+ Q + + +E+ PE++IVD I T
Sbjct: 139 AAKSDNCFILTDTQTQNIFRQIEDFQPEILIVDSIQT 175
>gi|160893053|ref|ZP_02073841.1| hypothetical protein CLOL250_00598 [Clostridium sp. L2-50]
gi|156865136|gb|EDO58567.1| shikimate kinase [Clostridium sp. L2-50]
Length = 170
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 65/145 (44%), Gaps = 32/145 (22%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSN---------EIGGDG------ 54
K+I+ +G PG GK+T+ +A+VL +F V++ + E G DG
Sbjct: 2 KNIVLIGMPGCGKSTIGVVLAKVLGFDFVDADVLIQKKHGKLLRELIAEYGDDGFLQIEN 61
Query: 55 ------DIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSI 108
D+ ++ I T + + ++QH V ++++ E+ E A ++
Sbjct: 62 DVNKEIDLKNTVIATGGSVVYCDEAMQHYV--------KNDIVVYIELPYEVIASRLENV 113
Query: 109 AERGVMLIGTAHGEWLENIIKNPIL 133
RGV+L G+ L+++ K IL
Sbjct: 114 KRRGVVL---KDGQTLKDLYKERIL 135
>gi|386814213|ref|ZP_10101437.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386403710|dbj|GAB64318.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 178
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 49/105 (46%), Gaps = 20/105 (19%)
Query: 10 KSILFVGRPGVGKTTVMREI---------------ARVLSDEFQKRVVIVDTSNEIGGDG 54
K IL G+PGVGKTTVMR+I RV+ RVV +D N I
Sbjct: 5 KHILLTGKPGVGKTTVMRKIIPLLGADAGGFFTEEIRVMGKRMGFRVVTLDGDNGILAHV 64
Query: 55 DIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPE--VIIVDEIG 97
D HS + V S + ++ I +EN M ++++DEIG
Sbjct: 65 DY-HSDYRVG-KYYVDLDSFE-RIAIPTLENAMKNKSILVIDEIG 106
>gi|302500997|ref|XP_003012491.1| hypothetical protein ARB_01104 [Arthroderma benhamiae CBS 112371]
gi|291176050|gb|EFE31851.1| hypothetical protein ARB_01104 [Arthroderma benhamiae CBS 112371]
Length = 1063
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 555 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRII 613
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 614 QALKKCQTENP 624
>gi|291190900|ref|NP_001167070.1| peroxisomal Lon protease homolog 2 [Salmo salar]
gi|223647948|gb|ACN10732.1| Peroxisomal Lon protease homolog 2 [Salmo salar]
Length = 863
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 21/31 (67%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQK 39
G + FVG PGVGKT+V R IAR L EF +
Sbjct: 374 GPILCFVGPPGVGKTSVGRSIARTLGREFHR 404
>gi|348503894|ref|XP_003439497.1| PREDICTED: lon protease homolog 2, peroxisomal-like [Oreochromis
niloticus]
Length = 856
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 21/31 (67%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQK 39
G + FVG PGVGKT+V R IAR L EF +
Sbjct: 372 GPILCFVGPPGVGKTSVGRSIARTLGREFHR 402
>gi|302660120|ref|XP_003021742.1| hypothetical protein TRV_04140 [Trichophyton verrucosum HKI 0517]
gi|291185656|gb|EFE41124.1| hypothetical protein TRV_04140 [Trichophyton verrucosum HKI 0517]
Length = 1067
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 559 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRII 617
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 618 QALKKCQTENP 628
>gi|50302983|ref|XP_451429.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640560|emb|CAH03017.1| KLLA0A09823p [Kluyveromyces lactis]
Length = 1319
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 14/87 (16%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 69
+ +LF G PG GKT + R +A S+E +K + DI +G A R
Sbjct: 439 RGVLFHGPPGTGKTLMARALAASCSNEKRKITFFMRKG------ADILSKWVGEAER--- 489
Query: 70 PEPSLQHKVMIEAVENHMPEVIIVDEI 96
Q +++ E + H P +I DEI
Sbjct: 490 -----QLRLLFEEAKKHQPAIIFFDEI 511
>gi|429849755|gb|ELA25100.1| ATP-dependent protease la [Colletotrichum gloeosporioides Nara gc5]
Length = 1058
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK I FVG PGVGKT++ + IAR L+ ++ + V + D + EI G G +P I
Sbjct: 536 GKIICFVGPPGVGKTSIGKSIARALNRQYYRFSVGGLTDVA-EIKGHRRTYVGALPGRII 594
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 595 QALKKCQTENP 605
>gi|358374147|dbj|GAA90741.1| mitochondrial DNA helicase [Aspergillus kawachii IFO 4308]
Length = 761
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 5 LLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQK 39
++ GKSI F G G GK+ +MREI + L D+++K
Sbjct: 252 VVQQGKSIFFTGSAGTGKSVLMREIIKKLRDKYKK 286
>gi|56693217|ref|NP_001008573.1| lon protease homolog 2, peroxisomal [Danio rerio]
gi|82232440|sp|Q5PQY6.1|LONP2_DANRE RecName: Full=Lon protease homolog 2, peroxisomal
gi|56269780|gb|AAH86968.1| Lon peptidase 2, peroxisomal [Danio rerio]
Length = 840
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 21/31 (67%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQK 39
G + FVG PGVGKT+V R IAR L EF +
Sbjct: 368 GPILCFVGPPGVGKTSVGRSIARTLGREFHR 398
>gi|430811698|emb|CCJ30831.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1035
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK + FVG PGVGKT++ + IAR L +F + V + D + EI G G +P I
Sbjct: 578 GKILCFVGPPGVGKTSIGKSIARALDRQFYRFSVGGLSDVA-EIKGHRRTYVGAMPGKII 636
Query: 62 GTARRMQVPEPSLQHKVMIEAVENHMPE 89
+ +++ ++ +++ VE PE
Sbjct: 637 QSLKKLTKSAEDIKEILLVLYVELLDPE 664
>gi|310792115|gb|EFQ27642.1| ATP-dependent protease La [Glomerella graminicola M1.001]
Length = 1112
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK I FVG PGVGKT++ + IAR L+ ++ + V + D + EI G G +P I
Sbjct: 591 GKIICFVGPPGVGKTSIGKSIARALNRQYYRFSVGGLTDVA-EIKGHRRTYVGALPGRII 649
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 650 QALKKCQTENP 660
>gi|359787251|ref|ZP_09290311.1| DNA repair protein RadA [Halomonas sp. GFAJ-1]
gi|359295470|gb|EHK59738.1| DNA repair protein RadA [Halomonas sp. GFAJ-1]
Length = 456
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 15/96 (15%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 68
G ++L G PG GK+T++ + A L+ Q+R++ V G+ + A+ A R+Q
Sbjct: 94 GSAVLLGGNPGAGKSTLLLQTACKLAQ--QRRILYVT------GEESLSQVAM-RAHRLQ 144
Query: 69 VPEPSLQH------KVMIEAVENHMPEVIIVDEIGT 98
+P LQ + ++ + PE++++D I T
Sbjct: 145 LPTSGLQMLAETSVETILAVADRENPEILVIDSIQT 180
>gi|145249534|ref|XP_001401106.1| DNA helicase PIF1 [Aspergillus niger CBS 513.88]
gi|134081788|emb|CAK42044.1| unnamed protein product [Aspergillus niger]
Length = 800
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 5 LLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQK 39
++ GKSI F G G GK+ +MREI + L D+++K
Sbjct: 298 VVQQGKSIFFTGSAGTGKSVLMREIIKKLRDKYKK 332
>gi|434387087|ref|YP_007097698.1| pilus retraction protein PilT [Chamaesiphon minutus PCC 6605]
gi|428018077|gb|AFY94171.1| pilus retraction protein PilT [Chamaesiphon minutus PCC 6605]
Length = 396
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 6/118 (5%)
Query: 4 DLLHYGKSILFVGRP-GVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIG 62
D+ HY K ++ V P G GK+T M + ++ E + ++ ++ E I S
Sbjct: 161 DVCHYHKGLILVTGPTGSGKSTSMAAMVDYMNKEMPRHIITIEDPIEF-----IHKSKRA 215
Query: 63 TARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 120
+ +V +L+ ++A P+VI+V E+ + A+ G ++IGT H
Sbjct: 216 LIKHREVGANTLKFDTALKAALREDPDVILVGEMRDRETVNTALKAAQTGHLVIGTLH 273
>gi|387910558|ref|YP_006340864.1| Late competence protein, ABC transporter subunit [Streptococcus
thermophilus MN-ZLW-002]
gi|387575493|gb|AFJ84199.1| Late competence protein, ABC transporter subunit [Streptococcus
thermophilus MN-ZLW-002]
Length = 313
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 18/146 (12%)
Query: 2 VYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQ-KRVVIVDTSNEIGGDGDIPHSA 60
+ D L Y LF G G GKTT+M E+ + + F+ ++V+ ++ EI D
Sbjct: 125 IKDALDYRGLYLFAGPVGSGKTTLMHELVQ---ERFKGQQVISIEDPVEIKQD------- 174
Query: 61 IGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 119
++QV + + + +I+ H P+V+I+ EI + A A + GV ++ T
Sbjct: 175 --NVLQLQVNQAIDMTYDSLIKLSLRHRPDVLIIGEIRDKETARAVIRASLTGVTVLSTI 232
Query: 120 HGEWLENIIKNPILSDLIGGVDTVTL 145
H + + + + L DL GVD L
Sbjct: 233 HAKSIAGVYER--LLDL--GVDKSEL 254
>gi|410077649|ref|XP_003956406.1| hypothetical protein KAFR_0C02780 [Kazachstania africana CBS 2517]
gi|372462990|emb|CCF57271.1| hypothetical protein KAFR_0C02780 [Kazachstania africana CBS 2517]
Length = 1043
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK I FVG PGVGKT++ + IAR L+ F + V + D + EI G G +P +
Sbjct: 539 GKIICFVGPPGVGKTSIGKSIARALNRRFFRFSVGGMTDVA-EIKGHRRTYIGALPGRVV 597
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 598 QALKKCQTQNP 608
>gi|298707690|emb|CBJ26007.1| Pim1 homolog, ATP-dependent protease [Ectocarpus siliculosus]
Length = 1075
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 12/131 (9%)
Query: 8 YGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRM 67
+G+ + FVG PGVGKT++ IA+ L EF + +GG D+ + I RR
Sbjct: 540 HGRILCFVGPPGVGKTSIGHSIAKALDREFYRF--------SVGGLRDV--AEIKGHRRT 589
Query: 68 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 127
V + ++ + P V+++DEI A AH + +L + + +L+N
Sbjct: 590 YVGSMPGKLIQCLKVTGTNNP-VVLIDEIDKLARAHDGDPASALLEVLDPSQNSAFLDNY 648
Query: 128 IKNPI-LSDLI 137
+ P+ LS+ +
Sbjct: 649 LDVPVDLSNCL 659
>gi|89897407|ref|YP_520894.1| hypothetical protein DSY4661 [Desulfitobacterium hafniense Y51]
gi|89336855|dbj|BAE86450.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 450
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 9/131 (6%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDT-SNEIG----GDGD 55
+ + L YG S+ G GKTT+ + + D KR+ ++ S E+ DG
Sbjct: 204 FLAECLRYGISVCVAGATSSGKTTLSGWLLTTIPD--NKRIFTIENGSRELALVRQKDGR 261
Query: 56 IPHSAIGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVM 114
+ +S I T RM E ++ ++++ PE+I V E+ EA+A + A G
Sbjct: 262 VCNSVIHTLTRMSENEKQNIDQDILLDMALRFNPEIICVGEM-RGPEAYAAQESARTGHT 320
Query: 115 LIGTAHGEWLE 125
++ T H E
Sbjct: 321 VLTTIHSNSCE 331
>gi|380484843|emb|CCF39738.1| lon protease [Colletotrichum higginsianum]
Length = 1110
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK I FVG PGVGKT++ + IAR L+ ++ + V + D + EI G G +P I
Sbjct: 589 GKIICFVGPPGVGKTSIGKSIARALNRQYYRFSVGGLTDVA-EIKGHRRTYVGALPGRII 647
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 648 QALKKCQTENP 658
>gi|386087466|ref|YP_006003340.1| Late competence protein, ABC transporter subunit [Streptococcus
thermophilus ND03]
gi|312279179|gb|ADQ63836.1| Late competence protein, ABC transporter subunit [Streptococcus
thermophilus ND03]
Length = 313
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 18/146 (12%)
Query: 2 VYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQ-KRVVIVDTSNEIGGDGDIPHSA 60
+ D L Y LF G G GKTT+M E+ + + F+ ++V+ ++ EI D
Sbjct: 125 IKDALDYRGLYLFAGPVGSGKTTLMHELVQ---ERFKGQQVISIEDPVEIKQD------- 174
Query: 61 IGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 119
++QV + + + +I+ H P+V+I+ EI + A A + GV ++ T
Sbjct: 175 --NVLQLQVNQAIDMTYDSLIKLSLRHRPDVLIIGEIRDKETARAVIRASLTGVTVLSTI 232
Query: 120 HGEWLENIIKNPILSDLIGGVDTVTL 145
H + + + + L DL GVD L
Sbjct: 233 HAKSIAGVYER--LLDL--GVDKSEL 254
>gi|447913723|ref|YP_007395135.1| Late competence protein ComGA, access of DNA to ComEA [Enterococcus
faecium NRRL B-2354]
gi|445189432|gb|AGE31074.1| Late competence protein ComGA, access of DNA to ComEA [Enterococcus
faecium NRRL B-2354]
Length = 291
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 22/137 (16%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV-PE 71
LF G G GKT++M +A L ++ Q V+ ++ EI + ++Q+ P+
Sbjct: 138 LFSGPVGSGKTSLMYRLA--LEEKLQ--VITIEDPVEIEEPFFL---------QLQINPK 184
Query: 72 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII--- 128
+ + +++ H P+++I+ EI E+ AHA A G + T H LE +
Sbjct: 185 IAQTYDTLLKLALRHRPDLLIIGEIRDESTAHAAVRAALTGHRVFATVHARNLEGTLVRI 244
Query: 129 -----KNPILSDLIGGV 140
K LS+ + GV
Sbjct: 245 HELTKKKEELSECLAGV 261
>gi|441656649|ref|XP_003280643.2| PREDICTED: lon protease homolog, mitochondrial [Nomascus
leucogenys]
Length = 795
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 15/133 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 68
GK + F G PGVGKT++ R IAR L+ E+ + +GG D+ + I RR
Sbjct: 378 GKILCFYGPPGVGKTSIARSIARALNREYFR--------FSVGGMTDV--AEIKGHRRTY 427
Query: 69 VPEPSLQHKVMIEAVENHMPEVII--VDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 126
V + ++ + P ++I VD+IG + ++ E +L + +L++
Sbjct: 428 VGAMPGKIIQCLKKTKTENPLILIDEVDKIGRGYQGDPSSALLE---LLDPEQNANFLDH 484
Query: 127 IIKNPILSDLIGG 139
+ P+ +GG
Sbjct: 485 YLDVPVDLSKVGG 497
>gi|50290931|ref|XP_447898.1| hypothetical protein [Candida glabrata CBS 138]
gi|74690835|sp|Q6FPE6.1|LONM_CANGA RecName: Full=Lon protease homolog, mitochondrial; Flags: Precursor
gi|49527209|emb|CAG60847.1| unnamed protein product [Candida glabrata]
Length = 1026
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK I FVG PGVGKT++ + I+R L+ +F + V + D + EI G G +P I
Sbjct: 490 GKIICFVGPPGVGKTSIGKSISRALNRQFFRFSVGGMTDVA-EIKGHRRTYIGALPGRII 548
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 549 QALKKCQTQNP 559
>gi|442755967|gb|JAA70143.1| Putative atp-dependent lon protease [Ixodes ricinus]
Length = 798
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK + F G PGVGKT++ R IAR L+ E+
Sbjct: 588 GKMLCFYGPPGVGKTSIARSIARALNREY 616
>gi|423457506|ref|ZP_17434303.1| hypothetical protein IEI_00646 [Bacillus cereus BAG5X2-1]
gi|401147890|gb|EJQ55383.1| hypothetical protein IEI_00646 [Bacillus cereus BAG5X2-1]
Length = 348
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 11/121 (9%)
Query: 2 VYDLLHYGKSIL-FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
+ LHY +L F G G GKTT M + V+ + +R+V ++ E D +
Sbjct: 130 LLSFLHYSHGLLVFTGPTGSGKTTTMYALLEVIRKKKTRRIVTLEDPVEKRNDDVL---- 185
Query: 61 IGTARRMQVPEPS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 119
++Q+ E + + ++ ++A+ H P++I+V EI E A + G +++ T
Sbjct: 186 -----QIQINEKAGITYEAGLKAILRHDPDIILVGEIRDEETAKIAIRASLTGHLVMTTL 240
Query: 120 H 120
H
Sbjct: 241 H 241
>gi|229031892|ref|ZP_04187880.1| ComG operon protein 1 [Bacillus cereus AH1271]
gi|228729510|gb|EEL80499.1| ComG operon protein 1 [Bacillus cereus AH1271]
Length = 348
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 11/121 (9%)
Query: 2 VYDLLHYGKSIL-FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
+ LHY +L F G G GKTT M + V+ + +R+V ++ E D +
Sbjct: 130 LLSFLHYSHGLLVFTGPTGSGKTTTMYALLEVIRKKKTRRIVTLEDPVEKRNDDVL---- 185
Query: 61 IGTARRMQVPEPS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 119
++Q+ E + + ++ ++A+ H P++I+V EI E A + G +++ T
Sbjct: 186 -----QIQINEKAGITYEAGLKAILRHDPDIILVGEIRDEETAKIAIRASLTGHLVMTTL 240
Query: 120 H 120
H
Sbjct: 241 H 241
>gi|445383084|ref|ZP_21427403.1| late competence protein ABC transporter subunit [Streptococcus
thermophilus MTCC 5460]
gi|445395975|ref|ZP_21429133.1| late competence protein ABC transporter subunit [Streptococcus
thermophilus MTCC 5461]
gi|444748326|gb|ELW73302.1| late competence protein ABC transporter subunit [Streptococcus
thermophilus MTCC 5461]
gi|444748433|gb|ELW73402.1| late competence protein ABC transporter subunit [Streptococcus
thermophilus MTCC 5460]
Length = 313
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 18/146 (12%)
Query: 2 VYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQ-KRVVIVDTSNEIGGDGDIPHSA 60
+ D L Y LF G G GKTT+M E+ + + F+ ++V+ ++ EI D
Sbjct: 125 IKDALDYRGLYLFAGPVGSGKTTLMHELVQ---ERFKGQQVISIEDPVEIKQD------- 174
Query: 61 IGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 119
++QV + + + +I+ H P+V+I+ EI + A A + GV ++ T
Sbjct: 175 --NVLQLQVNQAIDMTYDSLIKLSLRHRPDVLIIGEIRDKETARAVIRASLTGVTVLSTI 232
Query: 120 HGEWLENIIKNPILSDLIGGVDTVTL 145
H + + + + L DL GVD L
Sbjct: 233 HAKSIAGVYER--LLDL--GVDKSEL 254
>gi|380093965|emb|CCC08182.1| putative ATP-dependent peptidase [Sordaria macrospora k-hell]
Length = 1078
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 68/135 (50%), Gaps = 21/135 (15%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 68
GK + FVG PGVGKT++ + IAR L ++ + V GG D+ + I RR
Sbjct: 586 GKILCFVGPPGVGKTSIGKSIARALGRQYYRFSV--------GGLTDV--AEIKGHRRTY 635
Query: 69 VPEPSLQHKVM--IEAVENHMPEVII--VDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 124
V +L +V+ ++ + P ++I +D+IG + ++ E +L +G +L
Sbjct: 636 V--GALPGRVIQALKKCKTENPLILIDEIDKIGRGYQGDPSSALLE---LLDPEQNGSFL 690
Query: 125 ENIIKNPILSDLIGG 139
++ + P+ DL+ G
Sbjct: 691 DHYLDVPV--DLLSG 703
>gi|145592329|ref|YP_001154331.1| type II secretion system protein E [Pyrobaculum arsenaticum DSM
13514]
gi|145284097|gb|ABP51679.1| type II secretion system protein E [Pyrobaculum arsenaticum DSM
13514]
Length = 343
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 12/124 (9%)
Query: 6 LHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTAR 65
L G+ ++ G PG GKTT++ I ++ Q+ V +D ++E D +
Sbjct: 197 LREGRHVVVSGPPGSGKTTLLAAIDDLIPPHLQR--VYIDEADEFEDDPN---------- 244
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 125
+ Q+ S+ + A N +VI + E+ E A R+ +E G+ + T H +E
Sbjct: 245 KNQIKIRSVNKAKEVLASLNRNIDVIFIGELQYEDHFAAFRTASEMGLQTLATMHATNVE 304
Query: 126 NIIK 129
+ K
Sbjct: 305 DAQK 308
>gi|290990195|ref|XP_002677722.1| lon protease [Naegleria gruberi]
gi|284091331|gb|EFC44978.1| lon protease [Naegleria gruberi]
Length = 1007
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 44/102 (43%), Gaps = 25/102 (24%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK IL +G PGVGKT++ + IA L EF + V + D S EI G G IP I
Sbjct: 530 GKIILLMGPPGVGKTSIGKSIASSLGREFHRFSVGGLTDVS-EIKGHRRTYIGSIPGKLI 588
Query: 62 GTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAH 103
+ + P VI++DEI +H
Sbjct: 589 NIMKHCKTNNP-----------------VIMIDEIDKLGRSH 613
>gi|365983044|ref|XP_003668355.1| hypothetical protein NDAI_0B00780 [Naumovozyma dairenensis CBS 421]
gi|343767122|emb|CCD23112.1| hypothetical protein NDAI_0B00780 [Naumovozyma dairenensis CBS 421]
Length = 1348
Score = 38.9 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 14/87 (16%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 69
+ +LF G PG GKT + R +A S + QK + DI +G A R
Sbjct: 450 RGVLFHGPPGTGKTLMARALAASCSSDSQKITFFMRKG------ADILSKWVGEAER--- 500
Query: 70 PEPSLQHKVMIEAVENHMPEVIIVDEI 96
Q +++ E + H P +I DEI
Sbjct: 501 -----QLRLLFEEAKKHQPSIIFFDEI 522
>gi|350272888|ref|YP_004884196.1| hypothetical protein OBV_44920 [Oscillibacter valericigenes
Sjm18-20]
gi|348597730|dbj|BAL01691.1| hypothetical protein OBV_44920 [Oscillibacter valericigenes
Sjm18-20]
Length = 450
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 13/131 (9%)
Query: 4 DLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDT-SNEIG----GDGDIPH 58
+ + YG S+ G GKTTV + + D KR+ ++ S E+ DG + +
Sbjct: 206 ECIRYGISVCIAGATSSGKTTVAGWLLTTIPD--NKRIFTIENGSRELSLIREKDGRVTN 263
Query: 59 SAIGTARRMQVPEPSLQHKVMIEAVENHM---PEVIIVDEIGTEAEAHACRSIAERGVML 115
S + T R E L I+ V+ + P++I+V E+ AEA+A + +A GV +
Sbjct: 264 SVVHTLTRN--SENELYRIEQIDLVDISLRFNPDIIVVGEM-RGAEANAAQEVARTGVAV 320
Query: 116 IGTAHGEWLEN 126
+ T H E+
Sbjct: 321 VTTIHSNSCES 331
>gi|443896635|dbj|GAC73979.1| replication factor C, subunit RFC2 [Pseudozyma antarctica T-34]
Length = 374
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 12 ILFVGRPGVGKTTVMREIAR-VLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 70
+L G PG+GKTT + +AR +L D +++ V+ ++ S+E G D+ + I T + +V
Sbjct: 57 LLISGLPGIGKTTSVLCLARALLGDAYKEGVLELNASDERG--VDVVRNKIKTFAQKKVS 114
Query: 71 EPSLQHKVMI 80
P+ +HK++I
Sbjct: 115 LPAGRHKIVI 124
>gi|293566166|ref|ZP_06678569.1| ComG operon protein 1 [Enterococcus faecium E1071]
gi|294618791|ref|ZP_06698318.1| putative ABC transporter, ATP-binding protein ComYA; competence
protein [Enterococcus faecium E1679]
gi|294622213|ref|ZP_06701273.1| ComG operon protein 1 [Enterococcus faecium U0317]
gi|406579509|ref|ZP_11054739.1| type II/IV secretion system protein [Enterococcus sp. GMD4E]
gi|406581779|ref|ZP_11056915.1| type II/IV secretion system protein [Enterococcus sp. GMD3E]
gi|406583818|ref|ZP_11058857.1| type II/IV secretion system protein [Enterococcus sp. GMD2E]
gi|406591427|ref|ZP_11065709.1| type II/IV secretion system protein [Enterococcus sp. GMD1E]
gi|410936672|ref|ZP_11368536.1| type II/IV secretion system protein [Enterococcus sp. GMD5E]
gi|416130740|ref|ZP_11597526.1| ComG operon protein 1 [Enterococcus faecium E4452]
gi|427395781|ref|ZP_18888703.1| hypothetical protein HMPREF9307_00879 [Enterococcus durans
FB129-CNAB-4]
gi|430823642|ref|ZP_19442211.1| competence protein ComGA [Enterococcus faecium E0120]
gi|430836634|ref|ZP_19454611.1| competence protein ComGA [Enterococcus faecium E0680]
gi|430839668|ref|ZP_19457606.1| competence protein ComGA [Enterococcus faecium E0688]
gi|430845219|ref|ZP_19463115.1| competence protein ComGA [Enterococcus faecium E1050]
gi|430853883|ref|ZP_19471609.1| competence protein ComGA [Enterococcus faecium E1258]
gi|430859544|ref|ZP_19477155.1| competence protein ComGA [Enterococcus faecium E1552]
gi|430860936|ref|ZP_19478531.1| competence protein ComGA [Enterococcus faecium E1573]
gi|430866723|ref|ZP_19481949.1| competence protein ComGA [Enterococcus faecium E1574]
gi|430960557|ref|ZP_19487093.1| competence protein ComGA [Enterococcus faecium E1576]
gi|431012419|ref|ZP_19490210.1| competence protein ComGA [Enterococcus faecium E1578]
gi|431260202|ref|ZP_19505708.1| competence protein ComGA [Enterococcus faecium E1623]
gi|431305110|ref|ZP_19508477.1| competence protein ComGA [Enterococcus faecium E1626]
gi|431381371|ref|ZP_19510973.1| competence protein ComGA [Enterococcus faecium E1627]
gi|431520338|ref|ZP_19516621.1| competence protein ComGA [Enterococcus faecium E1634]
gi|431702966|ref|ZP_19525089.1| competence protein ComGA [Enterococcus faecium E1904]
gi|431744412|ref|ZP_19533280.1| competence protein ComGA [Enterococcus faecium E2071]
gi|431745100|ref|ZP_19533954.1| competence protein ComGA [Enterococcus faecium E2134]
gi|431777504|ref|ZP_19565758.1| competence protein ComGA [Enterococcus faecium E2560]
gi|431783770|ref|ZP_19571861.1| competence protein ComGA [Enterococcus faecium E6012]
gi|431786280|ref|ZP_19574294.1| competence protein ComGA [Enterococcus faecium E6045]
gi|291590092|gb|EFF21884.1| ComG operon protein 1 [Enterococcus faecium E1071]
gi|291594979|gb|EFF26329.1| putative ABC transporter, ATP-binding protein ComYA; competence
protein [Enterococcus faecium E1679]
gi|291598255|gb|EFF29348.1| ComG operon protein 1 [Enterococcus faecium U0317]
gi|364093909|gb|EHM36139.1| ComG operon protein 1 [Enterococcus faecium E4452]
gi|404455237|gb|EKA02096.1| type II/IV secretion system protein [Enterococcus sp. GMD4E]
gi|404459244|gb|EKA05614.1| type II/IV secretion system protein [Enterococcus sp. GMD3E]
gi|404464966|gb|EKA10475.1| type II/IV secretion system protein [Enterococcus sp. GMD2E]
gi|404467742|gb|EKA12808.1| type II/IV secretion system protein [Enterococcus sp. GMD1E]
gi|410735088|gb|EKQ77005.1| type II/IV secretion system protein [Enterococcus sp. GMD5E]
gi|425723770|gb|EKU86657.1| hypothetical protein HMPREF9307_00879 [Enterococcus durans
FB129-CNAB-4]
gi|430441675|gb|ELA51746.1| competence protein ComGA [Enterococcus faecium E0120]
gi|430487957|gb|ELA64650.1| competence protein ComGA [Enterococcus faecium E0680]
gi|430490404|gb|ELA66929.1| competence protein ComGA [Enterococcus faecium E0688]
gi|430496053|gb|ELA72173.1| competence protein ComGA [Enterococcus faecium E1050]
gi|430540132|gb|ELA80350.1| competence protein ComGA [Enterococcus faecium E1258]
gi|430543511|gb|ELA83573.1| competence protein ComGA [Enterococcus faecium E1552]
gi|430550773|gb|ELA90543.1| competence protein ComGA [Enterococcus faecium E1574]
gi|430551254|gb|ELA91023.1| competence protein ComGA [Enterococcus faecium E1573]
gi|430556066|gb|ELA95582.1| competence protein ComGA [Enterococcus faecium E1576]
gi|430559930|gb|ELA99254.1| competence protein ComGA [Enterococcus faecium E1578]
gi|430576941|gb|ELB15566.1| competence protein ComGA [Enterococcus faecium E1623]
gi|430579317|gb|ELB17826.1| competence protein ComGA [Enterococcus faecium E1626]
gi|430581733|gb|ELB20171.1| competence protein ComGA [Enterococcus faecium E1627]
gi|430585218|gb|ELB23513.1| competence protein ComGA [Enterococcus faecium E1634]
gi|430597049|gb|ELB34860.1| competence protein ComGA [Enterococcus faecium E1904]
gi|430605155|gb|ELB42560.1| competence protein ComGA [Enterococcus faecium E2071]
gi|430611154|gb|ELB48264.1| competence protein ComGA [Enterococcus faecium E2134]
gi|430639616|gb|ELB75489.1| competence protein ComGA [Enterococcus faecium E2560]
gi|430644515|gb|ELB80125.1| competence protein ComGA [Enterococcus faecium E6012]
gi|430645765|gb|ELB81268.1| competence protein ComGA [Enterococcus faecium E6045]
Length = 309
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 22/137 (16%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV-PE 71
LF G G GKT++M +A L ++ Q V+ ++ EI + ++Q+ P+
Sbjct: 138 LFSGPVGSGKTSLMYRLA--LEEKLQ--VITIEDPVEIEEPFFL---------QLQINPK 184
Query: 72 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII--- 128
+ + +++ H P+++I+ EI E+ AHA A G + T H LE +
Sbjct: 185 IAQTYDTLLKLALRHRPDLLIIGEIRDESTAHAAVRAALTGHRVFATVHARNLEGTLVRI 244
Query: 129 -----KNPILSDLIGGV 140
K LS+ + GV
Sbjct: 245 HELTKKKEELSECLAGV 261
>gi|340959930|gb|EGS21111.1| lon protease-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1143
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK + FVG PGVGKT++ + IAR L+ ++ + V + D + EI G G +P I
Sbjct: 599 GKILCFVGPPGVGKTSIGKSIARALNRQYYRFSVGGLTDVA-EIKGHRRTYVGALPGRVI 657
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 658 QALKKCQTENP 668
>gi|337754430|ref|YP_004646941.1| DNA repair protein RadA [Francisella sp. TX077308]
gi|336446035|gb|AEI35341.1| DNA repair protein RadA [Francisella sp. TX077308]
Length = 456
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 15/96 (15%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 68
G L G PG+GK++++ +I LS QK+V+ V G+ + A+ A R+
Sbjct: 90 GSVTLVGGEPGIGKSSILLQIMSFLS--LQKKVLYVS------GEESLEQIAL-RAERLN 140
Query: 69 VPEPSL--QHKVMIEAVENHM----PEVIIVDEIGT 98
+P+ +L + IE + ++M PEV++VD I T
Sbjct: 141 LPKDNLLVMCETNIEQIASYMIEHKPEVVVVDSIQT 176
>gi|255719910|ref|XP_002556235.1| KLTH0H08184p [Lachancea thermotolerans]
gi|238942201|emb|CAR30373.1| KLTH0H08184p [Lachancea thermotolerans CBS 6340]
Length = 1105
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK I FVG PGVGKT++ + IAR L+ +F
Sbjct: 590 GKIICFVGPPGVGKTSIGKSIARSLNRQF 618
>gi|410931020|ref|XP_003978894.1| PREDICTED: lon protease homolog 2, peroxisomal-like [Takifugu
rubripes]
Length = 837
Score = 38.9 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 18/31 (58%), Positives = 21/31 (67%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQK 39
G + FVG PGVGKT+V R IAR L EF +
Sbjct: 367 GPILCFVGPPGVGKTSVGRSIARTLGREFHR 397
>gi|328773295|gb|EGF83332.1| hypothetical protein BATDEDRAFT_84876 [Batrachochytrium
dendrobatidis JAM81]
Length = 1154
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK I VG PGVGKT+V + IAR L EF + V + D + EI G G +P +
Sbjct: 668 GKIIAMVGPPGVGKTSVGKSIARALGREFYRFSVGGLSDVA-EIKGHRRTYVGAMPGKVV 726
Query: 62 GTARRMQVPEP 72
+++Q P
Sbjct: 727 QALKKVQTENP 737
>gi|430820741|ref|ZP_19439364.1| competence protein ComGA [Enterococcus faecium E0045]
gi|430826539|ref|ZP_19444719.1| competence protein ComGA [Enterococcus faecium E0164]
gi|430829137|ref|ZP_19447235.1| competence protein ComGA [Enterococcus faecium E0269]
gi|431218506|ref|ZP_19501316.1| competence protein ComGA [Enterococcus faecium E1620]
gi|431765560|ref|ZP_19554070.1| competence protein ComGA [Enterococcus faecium E4215]
gi|430439287|gb|ELA49653.1| competence protein ComGA [Enterococcus faecium E0045]
gi|430444947|gb|ELA54744.1| competence protein ComGA [Enterococcus faecium E0164]
gi|430481556|gb|ELA58710.1| competence protein ComGA [Enterococcus faecium E0269]
gi|430569575|gb|ELB08566.1| competence protein ComGA [Enterococcus faecium E1620]
gi|430628034|gb|ELB64491.1| competence protein ComGA [Enterococcus faecium E4215]
Length = 309
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 22/137 (16%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV-PE 71
LF G G GKT++M +A L ++ Q V+ ++ EI + ++Q+ P+
Sbjct: 138 LFSGPVGSGKTSLMYRLA--LEEKLQ--VITIEDPVEIEEPFFL---------QLQINPK 184
Query: 72 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII--- 128
+ + +++ H P+++I+ EI E+ AHA A G + T H LE +
Sbjct: 185 IAQTYDTLLKLALRHRPDLLIIGEIRDESTAHAAVRAALTGHRVFATVHARNLEGTLVRI 244
Query: 129 -----KNPILSDLIGGV 140
K LS+ + GV
Sbjct: 245 HELTKKKEELSECLAGV 261
>gi|374629584|ref|ZP_09701969.1| ATPase, PilT family [Methanoplanus limicola DSM 2279]
gi|373907697|gb|EHQ35801.1| ATPase, PilT family [Methanoplanus limicola DSM 2279]
Length = 645
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 57/132 (43%), Gaps = 25/132 (18%)
Query: 5 LLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTA 64
LL + +L VG PG GKTT+ + +A LSD+ + +
Sbjct: 258 LLDGRQGMLIVGMPGTGKTTLAQSVAIFLSDK------------------EYSVKTMEAP 299
Query: 65 RRMQVPEPSLQHKVMIEAVENH-------MPEVIIVDEIGTEAEAHACRSIAERGVMLIG 117
R +QVP+ Q+ + ++EN P+ +I DE+ + + G+ ++G
Sbjct: 300 RDIQVPDEITQYTALDGSMENTGEVMLLIRPDYVIFDELRKSDDFSVFADMRLAGINMVG 359
Query: 118 TAHGEWLENIIK 129
H + +E+ ++
Sbjct: 360 ILHADDVEDALQ 371
>gi|333979833|ref|YP_004517778.1| type II secretion system protein E [Desulfotomaculum kuznetsovii
DSM 6115]
gi|333823314|gb|AEG15977.1| type II secretion system protein E [Desulfotomaculum kuznetsovii
DSM 6115]
Length = 701
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 14/125 (11%)
Query: 2 VYDLLHYGKS-ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
V LL G++ ILF G P GKT+++R++ L+ R+V++ E+ + P
Sbjct: 174 VMRLLARGRTNILFSGNPRSGKTSLLRKLVGELAQRL--RIVVIGKDLELKLRQEYPDRN 231
Query: 61 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEA----HAC-RSIAERGVML 115
I PE + + EA P+V+I++E + EA HAC R I RG M
Sbjct: 232 I--VEFEAHPEIGTGMQEIFEATLRESPDVVIIEEFRGKGEAVEAIHACTRGI--RGAM- 286
Query: 116 IGTAH 120
TAH
Sbjct: 287 -ATAH 290
>gi|294614176|ref|ZP_06694096.1| ComG operon protein 1 [Enterococcus faecium E1636]
gi|430850302|ref|ZP_19468064.1| competence protein ComGA [Enterococcus faecium E1185]
gi|291592952|gb|EFF24541.1| ComG operon protein 1 [Enterococcus faecium E1636]
gi|430535640|gb|ELA76039.1| competence protein ComGA [Enterococcus faecium E1185]
Length = 309
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 22/137 (16%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV-PE 71
LF G G GKT++M +A L ++ Q V+ ++ EI + ++Q+ P+
Sbjct: 138 LFSGPVGSGKTSLMYRLA--LEEKLQ--VITIEDPVEIEEPFFL---------QLQINPK 184
Query: 72 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII--- 128
+ + +++ H P+++I+ EI E+ AHA A G + T H LE +
Sbjct: 185 IAQTYDTLLKLALRHRPDLLIIGEIRDESTAHAAVRAALTGHRVFATVHARNLEGTLVRI 244
Query: 129 -----KNPILSDLIGGV 140
K LS+ + GV
Sbjct: 245 HELTKKKEELSECLAGV 261
>gi|433454570|ref|ZP_20413137.1| ATP-dependent protease La [Mycoplasma sp. G5847]
gi|431933346|gb|ELK19939.1| ATP-dependent protease La [Mycoplasma sp. G5847]
Length = 787
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQK-RVVIVDTSNEIGGD-----GDIPHSAIG 62
G I FVG PGVGKT++ R IA L +F K + V +EI G G +P I
Sbjct: 356 GPIITFVGPPGVGKTSLARSIAEALGKKFVKVSLGGVKDESEIRGHRKTYVGSMPGRIIQ 415
Query: 63 TARRMQVPEP 72
+R +V P
Sbjct: 416 ALKRAKVKNP 425
>gi|427709313|ref|YP_007051690.1| putative signal transduction protein with Nacht domain [Nostoc sp.
PCC 7107]
gi|427361818|gb|AFY44540.1| putative signal transduction protein with Nacht domain [Nostoc sp.
PCC 7107]
Length = 1374
Score = 38.9 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVI 43
G+ I +G PG GKTT++++IA +S E Q+ +VI
Sbjct: 73 GRRIAIIGEPGAGKTTLLQQIADWVSREIQQSIVI 107
>gi|334564121|ref|ZP_08517112.1| putative FtsK/SpoIIIE family protein [Corynebacterium bovis DSM
20582]
Length = 1070
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 20/155 (12%)
Query: 13 LFVGRPGVGKTTVMREIARVLS-DEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 71
+ VGRP GKTT++R +A LS V +VD + G +P A V
Sbjct: 634 IVVGRPQSGKTTLVRAVALALSLSSPGVAVYVVDGGGALTELGRLPQVA-------AVAG 686
Query: 72 PSLQHKVMIEAV---ENHMPEVIIVDEIGTEAEAHACRSIA----ERGVMLIGTAHGEWL 124
P L +V+ + + E+ P V++VD + + IA +RG L+ T+ L
Sbjct: 687 PGLVDRVLDDVLLRMESRSPTVLLVDGLDAVGDDPRLVDIATRGLDRGTHLVVTS----L 742
Query: 125 ENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 159
+I+ P L D + G + + E+R RR Q ++
Sbjct: 743 RWMIR-PQLRDALTGAVELAVDPAESRFRRAQAAM 776
>gi|324504215|gb|ADY41820.1| Lon protease, partial [Ascaris suum]
Length = 967
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK + F G PGVGKT++ R IAR L+ E+ + V + D + EI G G +P I
Sbjct: 517 GKILCFHGPPGVGKTSIARSIARALNREYFRFSVGGMTDVA-EIKGHRRTYVGAMPGKMI 575
Query: 62 GTARRMQVPEP 72
+++Q P
Sbjct: 576 QCLKKVQTENP 586
>gi|410078782|ref|XP_003956972.1| hypothetical protein KAFR_0D01900 [Kazachstania africana CBS 2517]
gi|372463557|emb|CCF57837.1| hypothetical protein KAFR_0D01900 [Kazachstania africana CBS 2517]
Length = 1261
Score = 38.9 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 14/87 (16%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 69
+ +LF G PG GKT V R +A S + +K + DI +G A R
Sbjct: 386 RGVLFHGPPGTGKTLVARALAASCSSDSKKITFFMRKG------ADILSKWVGEAER--- 436
Query: 70 PEPSLQHKVMIEAVENHMPEVIIVDEI 96
Q +++ E + H P +I DEI
Sbjct: 437 -----QLRLLFEEAKKHQPSIIFFDEI 458
>gi|225718574|gb|ACO15133.1| Replication factor C subunit 2 [Caligus clemensi]
Length = 325
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 11 SILFVGRPGVGKTTVMREIAR-VLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 69
+I+ G PGVGKTT + +AR +L F+ V+ ++ SNE G D+ + I + +V
Sbjct: 45 NIIIAGPPGVGKTTTILCLARALLGGSFKDAVLELNASNERG--IDVVRNKIKMFAQQKV 102
Query: 70 PEPSLQHKVMIEAVENHMPE 89
P +HK+++ + M E
Sbjct: 103 TLPQSRHKIIVLDEADSMTE 122
>gi|374325885|ref|YP_005084085.1| type II secretion system protein E [Pyrobaculum sp. 1860]
gi|356641154|gb|AET31833.1| type II secretion system protein E [Pyrobaculum sp. 1860]
Length = 310
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 12/120 (10%)
Query: 2 VYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAI 61
+Y + G+ I+ G PG GKTT++ + ++ E+Q+ V +D ++E D I
Sbjct: 160 IYRWVREGRHIVVTGPPGSGKTTLLSALDDLIPGEWQR--VYIDEADEFEDDPQKNQIKI 217
Query: 62 GTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 121
+++ SL + +VI + E+ E A ++ E G+ + T H
Sbjct: 218 RNVNKVKEIYASLNRNI----------DVIFIGELQYEEHFAAFKTAVEIGLQTLATMHS 267
>gi|325186172|emb|CCA20675.1| unnamed protein product putative [Albugo laibachii Nc14]
Length = 941
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK I FVG PGVGKT++ + IA L+ EF + V + D + EI G G +P I
Sbjct: 492 GKIICFVGPPGVGKTSIGKSIAECLNREFYRFSVGGLSDVA-EIKGHRRTYVGAMPGKVI 550
Query: 62 GTARRMQVPEP 72
+ Q P
Sbjct: 551 QCLKTTQSSNP 561
>gi|167999907|ref|XP_001752658.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696189|gb|EDQ82529.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 901
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 68
GK I G PGVGKT++ R IA L+ +F + +GG GD+ + I RR
Sbjct: 365 GKIICLAGPPGVGKTSIGRSIAHALNRQFYRF--------SVGGLGDV--AEIKGHRRTY 414
Query: 69 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 128
V + ++A P ++++DEI H+ + +L + +L++ +
Sbjct: 415 VGAMPGKMVQCLKATGTSNP-LVLIDEIDKLGRGHSGDPASALLELLDPEQNANFLDHYL 473
Query: 129 KNPI 132
PI
Sbjct: 474 DVPI 477
>gi|345560653|gb|EGX43778.1| hypothetical protein AOL_s00215g514 [Arthrobotrys oligospora ATCC
24927]
Length = 1147
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK + FVG PGVGKT++ + IAR + EF + V + D + EI G G +P I
Sbjct: 616 GKILCFVGPPGVGKTSIGKSIARAVQREFYRFSVGGLTDVA-EIKGHRRTYVGALPGRII 674
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 675 QALKKCQTENP 685
>gi|322795578|gb|EFZ18260.1| hypothetical protein SINV_11151 [Solenopsis invicta]
Length = 354
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 11 SILFVGRPGVGKTTVMREIAR-VLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 69
+I+ G PGVGKTT + +AR +L F++ V+ ++ SNE G D+ + I + +V
Sbjct: 74 NIIIAGPPGVGKTTTILCLARTLLGPAFKEAVLELNASNERG--IDVVRNKIKMFAQKKV 131
Query: 70 PEPSLQHKVMI 80
P +HK++I
Sbjct: 132 NLPKGKHKIII 142
>gi|260909923|ref|ZP_05916611.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
F0295]
gi|260635968|gb|EEX53970.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
F0295]
Length = 846
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 45/189 (23%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDE------FQKRVVIVDTSNEIGGDGDIPHSAIGTARR 66
+ +G PGVGK+ ++ +A++++ F KR+V +D + + GT R
Sbjct: 233 IIIGEPGVGKSAIVEGLAQLIAKRKTSPVLFNKRIVSLDMAGMVA----------GTKYR 282
Query: 67 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW-LE 125
Q E + + +++ +EN+ ++ +DEI T ++ G+ G
Sbjct: 283 GQFEE---RIRGLLKEIENNSDIIVFIDEIHT--------------IIGAGSTPGSMDAA 325
Query: 126 NIIKNPILSDLIGGVDTVTLGD-------EEARARRCQKSILE-RKAPPTFYFLIEMR-- 175
NI+K + I V TL + + A RR QK ILE A T L ++
Sbjct: 326 NIMKPALARGTIQCVGATTLDEYRNSIEKDGALERRFQKVILEPTTADETLQILENIKDR 385
Query: 176 -ERHYWVTH 183
ERH+ V +
Sbjct: 386 YERHHHVAY 394
>gi|315041877|ref|XP_003170315.1| ATP-dependent protease La [Arthroderma gypseum CBS 118893]
gi|311345349|gb|EFR04552.1| ATP-dependent protease La [Arthroderma gypseum CBS 118893]
Length = 1075
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 568 GKILCFVGPPGVGKTSIGKSIARSLNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRII 626
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 627 QALKKCQTENP 637
>gi|261209207|ref|ZP_05923599.1| type II secretion system protein E [Enterococcus faecium TC 6]
gi|289566124|ref|ZP_06446559.1| type II secretion system protein E [Enterococcus faecium D344SRF]
gi|260076753|gb|EEW64488.1| type II secretion system protein E [Enterococcus faecium TC 6]
gi|289162069|gb|EFD09934.1| type II secretion system protein E [Enterococcus faecium D344SRF]
Length = 317
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 22/137 (16%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV-PE 71
LF G G GKT++M +A L ++ Q V+ ++ EI + ++Q+ P+
Sbjct: 146 LFSGPVGSGKTSLMYRLA--LEEKLQ--VITIEDPVEIEEPFFL---------QLQINPK 192
Query: 72 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII--- 128
+ + +++ H P+++I+ EI E+ AHA A G + T H LE +
Sbjct: 193 IAQTYDTLLKLALRHRPDLLIIGEIRDESTAHAAVRAALTGHRVFATVHARNLEGTLVRI 252
Query: 129 -----KNPILSDLIGGV 140
K LS+ + GV
Sbjct: 253 HELTKKKEELSECLAGV 269
>gi|220930145|ref|YP_002507054.1| type II secretion system protein E [Clostridium cellulolyticum H10]
gi|220000473|gb|ACL77074.1| type II secretion system protein E [Clostridium cellulolyticum H10]
Length = 503
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 9/131 (6%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDT-SNEIG----GDGD 55
+ + L YG S+ G GKTTV + + D KR+ ++ S E+ DG
Sbjct: 251 FLSECLRYGISVCVAGATSSGKTTVAGWLLTTIPD--NKRIFTIENGSRELALVRKRDGK 308
Query: 56 IPHSAIGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVM 114
I +S I T R E ++ ++++ PE+I V E+ + +EA+ + A G
Sbjct: 309 IVNSVIHTLTRSSDNEKQNIDQDMLLDMALRFNPEIICVGEMRS-SEAYTAQESARTGHT 367
Query: 115 LIGTAHGEWLE 125
++ T H E
Sbjct: 368 VLTTIHSNSCE 378
>gi|448457032|ref|ZP_21595606.1| type II secretion system protein E [Halorubrum lipolyticum DSM
21995]
gi|445811119|gb|EMA61129.1| type II secretion system protein E [Halorubrum lipolyticum DSM
21995]
Length = 774
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 11/136 (8%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDT-SNEIGGDGDIPHS 59
+++ L + ++LF G GVGKTT+M + F R V +D S E+ +PH
Sbjct: 473 LLWLLYEHRGTVLFAGPTGVGKTTLMNAHTPFIP--FDDRPVSIDEGSREV----RLPHE 526
Query: 60 AIGTARRMQVPEPSLQHKVMIE--AVENHM-PEVIIVDEIGTEAEAHACRSIAERGVMLI 116
G + + E + + M E A N++ P+V ++ EI T A G +I
Sbjct: 527 -TGVSLTTRDHEDAYKAVSMSELMAEANYLNPDVEVIAEINTPASFETFAETLNTGHGVI 585
Query: 117 GTAHGEWLENIIKNPI 132
GT H E +E ++ I
Sbjct: 586 GTTHAEDVEALVNRVI 601
>gi|257882134|ref|ZP_05661787.1| type II/IV secretion system protein [Enterococcus faecium
1,231,502]
gi|257885325|ref|ZP_05664978.1| type II/IV secretion system protein [Enterococcus faecium
1,231,501]
gi|424779533|ref|ZP_18206453.1| ComG operon protein 1 family protein [Enterococcus faecium V689]
gi|424795867|ref|ZP_18221673.1| ComG operon protein 1 family protein [Enterococcus faecium S447]
gi|424938655|ref|ZP_18354429.1| ComG operon protein 1 family protein [Enterococcus faecium R496]
gi|424952956|ref|ZP_18367947.1| ComG operon protein 1 family protein [Enterococcus faecium R494]
gi|424956126|ref|ZP_18370921.1| ComG operon protein 1 family protein [Enterococcus faecium R446]
gi|424966632|ref|ZP_18380396.1| ComG operon protein 1 family protein [Enterococcus faecium P1140]
gi|424993962|ref|ZP_18405929.1| ComG operon protein 1 family protein [Enterococcus faecium ERV168]
gi|424996613|ref|ZP_18408411.1| ComG operon protein 1 family protein [Enterococcus faecium ERV165]
gi|425000724|ref|ZP_18412274.1| ComG operon protein 1 family protein [Enterococcus faecium ERV161]
gi|425003518|ref|ZP_18414882.1| ComG operon protein 1 family protein [Enterococcus faecium ERV102]
gi|425010086|ref|ZP_18421058.1| ComG operon protein 1 family protein [Enterococcus faecium E422]
gi|425017476|ref|ZP_18427979.1| ComG operon protein 1 family protein [Enterococcus faecium C621]
gi|425031905|ref|ZP_18437000.1| ComG operon protein 1 family protein [Enterococcus faecium 515]
gi|425037662|ref|ZP_18442313.1| ComG operon protein 1 family protein [Enterococcus faecium 513]
gi|257817792|gb|EEV45120.1| type II/IV secretion system protein [Enterococcus faecium
1,231,502]
gi|257821181|gb|EEV48311.1| type II/IV secretion system protein [Enterococcus faecium
1,231,501]
gi|402923884|gb|EJX44134.1| ComG operon protein 1 family protein [Enterococcus faecium S447]
gi|402925099|gb|EJX45270.1| ComG operon protein 1 family protein [Enterococcus faecium V689]
gi|402936577|gb|EJX55747.1| ComG operon protein 1 family protein [Enterococcus faecium R496]
gi|402940163|gb|EJX59019.1| ComG operon protein 1 family protein [Enterococcus faecium R494]
gi|402946686|gb|EJX64943.1| ComG operon protein 1 family protein [Enterococcus faecium R446]
gi|402956187|gb|EJX73661.1| ComG operon protein 1 family protein [Enterococcus faecium P1140]
gi|402981301|gb|EJX96840.1| ComG operon protein 1 family protein [Enterococcus faecium ERV168]
gi|402988200|gb|EJY03218.1| ComG operon protein 1 family protein [Enterococcus faecium ERV165]
gi|402988580|gb|EJY03577.1| ComG operon protein 1 family protein [Enterococcus faecium ERV161]
gi|402991827|gb|EJY06575.1| ComG operon protein 1 family protein [Enterococcus faecium ERV102]
gi|403001114|gb|EJY15186.1| ComG operon protein 1 family protein [Enterococcus faecium E422]
gi|403004261|gb|EJY18080.1| ComG operon protein 1 family protein [Enterococcus faecium C621]
gi|403014441|gb|EJY27444.1| ComG operon protein 1 family protein [Enterococcus faecium 515]
gi|403021445|gb|EJY33903.1| ComG operon protein 1 family protein [Enterococcus faecium 513]
Length = 317
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 22/137 (16%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV-PE 71
LF G G GKT++M +A L ++ Q V+ ++ EI + ++Q+ P+
Sbjct: 146 LFSGPVGSGKTSLMYRLA--LEEKLQ--VITIEDPVEIEEPFFL---------QLQINPK 192
Query: 72 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII--- 128
+ + +++ H P+++I+ EI E+ AHA A G + T H LE +
Sbjct: 193 IAQTYDTLLKLALRHRPDLLIIGEIRDESTAHAAVRAALTGHRVFATVHARNLEGTLVRI 252
Query: 129 -----KNPILSDLIGGV 140
K LS+ + GV
Sbjct: 253 HELTKKKEELSECLAGV 269
>gi|300813117|ref|ZP_07093495.1| type II/IV secretion system protein [Lactobacillus delbrueckii
subsp. bulgaricus PB2003/044-T3-4]
gi|300495958|gb|EFK31102.1| type II/IV secretion system protein [Lactobacillus delbrueckii
subsp. bulgaricus PB2003/044-T3-4]
Length = 323
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 10/119 (8%)
Query: 4 DLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGT 63
DL I+ G G GKTT M E+AR LS K V+ ++ E+ +
Sbjct: 126 DLCWLRGMIVTSGPTGSGKTTTMYELARKLSQ--TKMVMTIEDPVEVYEESFFQAQVNAG 183
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 122
A + + +++A H P+ +I+ EI E AH A G +++ T H +
Sbjct: 184 A--------GISYASLLKAALRHRPDALIIGEIRDEETAHLAVDAALSGHLVLATVHAK 234
>gi|391337930|ref|XP_003743317.1| PREDICTED: replication factor C subunit 2-like [Metaseiulus
occidentalis]
Length = 322
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 11 SILFVGRPGVGKTTVMREIAR-VLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 69
+I+ G PGVGKTT + +AR +L F++ V+ ++ SN+ G D+ + I + +V
Sbjct: 40 NIILCGPPGVGKTTTILCLARLLLGSSFREAVLELNASNDRG--IDVVRNKIKMFAQTKV 97
Query: 70 PEPSLQHKVMIEAVENHMPE 89
P +HK++I + M E
Sbjct: 98 TLPPGRHKIIILDEADSMTE 117
>gi|302681813|ref|XP_003030588.1| hypothetical protein SCHCODRAFT_57861 [Schizophyllum commune H4-8]
gi|300104279|gb|EFI95685.1| hypothetical protein SCHCODRAFT_57861 [Schizophyllum commune H4-8]
Length = 1042
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 57/138 (41%), Gaps = 37/138 (26%)
Query: 6 LHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTAR 65
+H +L GRPG GKT+++R +AR+L E+ + ++ + + P SAI
Sbjct: 404 VHGVTGLLLTGRPGAGKTSIVRAVARLL--EYDQTLLTYTLYADASAISEKPISAIKA-- 459
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEI----GTEAEAHA---CRSIAE-------- 110
Q + H P ++I+D++ G E E A R I E
Sbjct: 460 ---------QFDYWFDKAMWHRPAILILDDVDKLLGAEMEHTASFRARHIVELFLARFAP 510
Query: 111 ---------RGVMLIGTA 119
RGV+LI TA
Sbjct: 511 AARAAPLNSRGVLLIATA 528
>gi|225872282|ref|YP_002753737.1| endopeptidase LA [Acidobacterium capsulatum ATCC 51196]
gi|225793581|gb|ACO33671.1| endopeptidase LA [Acidobacterium capsulatum ATCC 51196]
Length = 808
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQK 39
G + FVG PGVGKT++ R IAR L +FQ+
Sbjct: 365 GPILCFVGPPGVGKTSLGRSIARALDRKFQR 395
>gi|428317734|ref|YP_007115616.1| putative signal transduction protein with Nacht domain
[Oscillatoria nigro-viridis PCC 7112]
gi|428241414|gb|AFZ07200.1| putative signal transduction protein with Nacht domain
[Oscillatoria nigro-viridis PCC 7112]
Length = 1512
Score = 38.5 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVI 43
GK + +G PG GKTT++R+IA ++DE + +VI
Sbjct: 315 GKRLGIIGEPGAGKTTLLRQIANWVADEILEAIVI 349
>gi|242011026|ref|XP_002426258.1| predicted protein [Pediculus humanus corporis]
gi|212510321|gb|EEB13520.1| predicted protein [Pediculus humanus corporis]
Length = 901
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK + F G PGVGKT++ R IAR L+ E+
Sbjct: 470 GKILCFFGPPGVGKTSIARSIARALNREY 498
>gi|365158968|ref|ZP_09355155.1| hypothetical protein HMPREF1014_00618 [Bacillus sp. 7_6_55CFAA_CT2]
gi|363625957|gb|EHL76966.1| hypothetical protein HMPREF1014_00618 [Bacillus sp. 7_6_55CFAA_CT2]
Length = 347
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 59/121 (48%), Gaps = 11/121 (9%)
Query: 2 VYDLLHYGKSIL-FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
+ L Y + +L F G G GKTT M + V+ + +R++ ++ E D +
Sbjct: 129 LLSFLRYSQGLLVFTGPTGSGKTTTMYALLEVIRKKKTRRIITLEDPVEKRSDDVL---- 184
Query: 61 IGTARRMQVPEPS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 119
++Q+ E + L +++ ++A+ H P++I+V EI E A + G +++ T
Sbjct: 185 -----QIQINEKAGLTYEIGLKAILRHDPDIILVGEIRDEETAKIAIRASLTGHLVMTTL 239
Query: 120 H 120
H
Sbjct: 240 H 240
>gi|346464509|gb|AEO32099.1| hypothetical protein [Amblyomma maculatum]
Length = 1017
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK + F G PGVGKT++ R IAR L+ E+
Sbjct: 585 GKILCFYGPPGVGKTSIARSIARALNREY 613
>gi|339000083|ref|ZP_08638706.1| DNA repair protein RadA [Halomonas sp. TD01]
gi|338763139|gb|EGP18148.1| DNA repair protein RadA [Halomonas sp. TD01]
Length = 456
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 15/96 (15%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 68
G ++L G PG GK+T++ + A L+ Q+R++ V G+ + A+ A R+Q
Sbjct: 94 GSAVLLGGNPGAGKSTLLLQTACKLAQ--QRRILYVT------GEESLSQVAM-RAHRLQ 144
Query: 69 VPEPSLQH------KVMIEAVENHMPEVIIVDEIGT 98
+P L+ + ++ E PE++++D I T
Sbjct: 145 LPTNGLKMLAETSVETILAVAEREKPEILVIDSIQT 180
>gi|332284012|ref|YP_004415923.1| flagellar biosynthesis regulator FlhF [Pusillimonas sp. T7-7]
gi|330427965|gb|AEC19299.1| flagellar biosynthesis regulator FlhF [Pusillimonas sp. T7-7]
Length = 769
Score = 38.5 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 48/186 (25%), Positives = 82/186 (44%), Gaps = 31/186 (16%)
Query: 4 DLLHYGKSILFVGRPGVGKTTVMREI-ARVLSDEFQKRVVIVDTSN-EIGGDGDIPHSAI 61
DL G++I VG GVGKTT + ++ AR + +V++ T IG H +
Sbjct: 157 DLWARGRAIALVGPTGVGKTTTIAKLAARCVRRAGPDSLVLLTTDTYRIGA-----HEQL 211
Query: 62 GT-ARRMQVPEPSLQHKVMIEAV--ENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIG- 117
+ M+VP Q ++A+ + H + +++D +G H IAE+ ML G
Sbjct: 212 KIYGQMMRVPVHVAQDVDELQAIIRQVHPDQTLLIDNVGISQRDH---YIAEQAAMLAGA 268
Query: 118 ------------TAHGEWLENIIKNPIL---SDLIGGVDTVTLGDEEARARRCQKSILER 162
T+HG+ L+ + ++ + S L G + +T DE +R + L
Sbjct: 269 GRPVSRLLVLNATSHGDTLDEVARSYVNDGGSPLAGCI--ITKVDEASRTGASLDTALRY 326
Query: 163 KAPPTF 168
+ P F
Sbjct: 327 QLPIHF 332
>gi|227552646|ref|ZP_03982695.1| competence protein ComGA [Enterococcus faecium TX1330]
gi|424764284|ref|ZP_18191727.1| ComG operon protein 1 family protein [Enterococcus faecium
TX1337RF]
gi|227178272|gb|EEI59244.1| competence protein ComGA [Enterococcus faecium TX1330]
gi|402419853|gb|EJV52126.1| ComG operon protein 1 family protein [Enterococcus faecium
TX1337RF]
Length = 334
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 22/137 (16%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV-PE 71
LF G G GKT++M +A L + +++V+ ++ EI + ++Q+ P+
Sbjct: 163 LFSGPVGSGKTSLMYRLA--LKE--KRQVITIEDPVEIEEPFFL---------QLQINPK 209
Query: 72 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII--- 128
+ + +++ H P+++I+ EI E+ AHA A G + T H LE +
Sbjct: 210 IAQTYDTLLKLALRHRPDLLIIGEIRDESTAHAAVRAALTGHRVFATVHARNLEGTLIRI 269
Query: 129 -----KNPILSDLIGGV 140
K LS+ + GV
Sbjct: 270 HELTKKKEELSECLAGV 286
>gi|288561110|ref|YP_003424596.1| ATPase [Methanobrevibacter ruminantium M1]
gi|288543820|gb|ADC47704.1| ATPase [Methanobrevibacter ruminantium M1]
Length = 375
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 19/99 (19%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 69
K++LF G PG GKT +A+ L++E R+ +V +++ IG H +R +
Sbjct: 160 KNVLFYGAPGTGKTM----LAKALANELDIRLYLVKSTSLIG-----EHVGDAASRIHE- 209
Query: 70 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSI 108
+ EA + P +I +DEI A + +S+
Sbjct: 210 ---------LFEAASRNAPSLIFIDEIDAIALHRSFQSL 239
>gi|320590805|gb|EFX03248.1| mitochondrial serine protease [Grosmannia clavigera kw1407]
Length = 1161
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK + FVG PGVGKT++ + IAR L+ ++ + V + D + EI G G +P I
Sbjct: 630 GKILCFVGPPGVGKTSIGKSIARALNRQYYRFSVGGLTDVA-EIKGHRRTYVGALPGRVI 688
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 689 QALKKCQTENP 699
>gi|300120194|emb|CBK19748.2| unnamed protein product [Blastocystis hominis]
Length = 656
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 6 LHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEI-GGDGDIPHSAIGTA 64
LH G+ VGR GVGK+T++ +AR + D F ++I+ E+ G D ++ S I +
Sbjct: 81 LHEGRHYGLVGRNGVGKSTLLSRMARSMIDGFPDYLMILHVKQEVMGNDVNVLDSVITSD 140
Query: 65 R 65
+
Sbjct: 141 K 141
>gi|427780105|gb|JAA55504.1| Putative atp-dependent lon protease atp-dependent lon protease
[Rhipicephalus pulchellus]
gi|427788559|gb|JAA59731.1| Putative atp-dependent lon protease atp-dependent lon protease
[Rhipicephalus pulchellus]
Length = 1019
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK + F G PGVGKT++ R IAR L+ E+
Sbjct: 586 GKILCFYGPPGVGKTSIARSIARALNREY 614
>gi|407853083|gb|EKG06202.1| dynein heavy chain, putative [Trypanosoma cruzi]
Length = 2377
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 11/73 (15%)
Query: 5 LLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTA 64
L+ YGK +LF G+ GVGK+ +M + R +E Q V++ S + +
Sbjct: 2022 LIQYGKPLLFNGQTGVGKSVIMMDYLRRHKEEQQLSVIVFQFSAQTSSE----------- 2070
Query: 65 RRMQVPEPSLQHK 77
R ++ E L+HK
Sbjct: 2071 RTQELIESKLKHK 2083
>gi|440291261|gb|ELP84530.1| replication factor C subunit, putative [Entamoeba invadens IP1]
Length = 328
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 17/102 (16%)
Query: 12 ILFVGRPGVGKTTVMREIAR-VLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 70
+L G+PG+GKTT + +AR +L D++++ V+ ++ S+E G I T R
Sbjct: 55 LLLCGQPGIGKTTSIHCLARELLKDKYKEAVLELNASDERG---------IDTIR--TTI 103
Query: 71 EPSLQHKVMIEAVENHMPEVIIVDEIG--TEAEAHACRSIAE 110
+ + KVM+ +++P+V+I+DE T A A R E
Sbjct: 104 KAFCEKKVML---PDNIPKVVILDEADSMTTAAFQALRRTME 142
>gi|255531040|ref|YP_003091412.1| ATPase AAA [Pedobacter heparinus DSM 2366]
gi|255344024|gb|ACU03350.1| ATPase AAA-2 domain protein [Pedobacter heparinus DSM 2366]
Length = 846
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 82/195 (42%), Gaps = 51/195 (26%)
Query: 13 LFVGRPGVGKTT---------VMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGT 63
+ +G PGVGK+ V R+++RVL F KRVV +D ++ + GT
Sbjct: 227 ILIGEPGVGKSAIAEGLALRIVQRKVSRVL---FNKRVVTLDLASLVA----------GT 273
Query: 64 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 123
R Q E + K ++ +E ++ +DEI T ++ G A G
Sbjct: 274 KYRGQFEE---RMKAVMNELEKSTDVILFIDEIHT--------------IVGAGGASGSL 316
Query: 124 -LENIIKNPILSDLIGGVDTVTLGD-------EEARARRCQKSILERKAP-PTFYFLIEM 174
N+ K + I + TL + + A RR QK ++E +P T L +
Sbjct: 317 DASNMFKPALARGEIQCIGATTLDEYRQYIEKDGALDRRFQKVMIEPASPDETIEILNRI 376
Query: 175 RER---HYWVTHKTE 186
+E+ H+ VT+ E
Sbjct: 377 KEKYEDHHGVTYTDE 391
>gi|241060074|ref|XP_002407985.1| ATP-dependent protease PIM1/LON, putative [Ixodes scapularis]
gi|215492328|gb|EEC01969.1| ATP-dependent protease PIM1/LON, putative [Ixodes scapularis]
Length = 857
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK + F G PGVGKT++ R IAR L+ E+
Sbjct: 423 GKMLCFYGPPGVGKTSIARSIARALNREY 451
>gi|410658027|ref|YP_006910398.1| Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA
subfamily [Dehalobacter sp. DCA]
gi|409020382|gb|AFV02413.1| Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA
subfamily [Dehalobacter sp. DCA]
Length = 475
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 9/131 (6%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDT-SNEIG----GDGD 55
+ + L YG S+ G GKTT+ + + D KR+ ++ S E+ DG
Sbjct: 229 FLAECLRYGISVCVAGATSSGKTTLAGWLLTTIPD--NKRIFTIENGSRELALVRQKDGR 286
Query: 56 IPHSAIGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVM 114
+ +S I T RM E ++ ++++ PE+I V E+ EA+A + A G
Sbjct: 287 VWNSVIHTLTRMSENEKQNIDQDILLDMALRFNPEIICVGEM-RGPEAYAAQESARTGHT 345
Query: 115 LIGTAHGEWLE 125
++ T H E
Sbjct: 346 VLTTIHSNSCE 356
>gi|340399748|ref|YP_004728773.1| late competence protein, ABC transporter subunit [Streptococcus
salivarius CCHSS3]
gi|338743741|emb|CCB94251.1| late competence protein, ABC transporter subunit [Streptococcus
salivarius CCHSS3]
Length = 313
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 18/146 (12%)
Query: 2 VYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQ-KRVVIVDTSNEIGGDGDIPHSA 60
+ D L Y LF G G GKTT+M E+ + + F+ ++V+ ++ EI D
Sbjct: 125 IMDALDYRGLYLFAGPVGSGKTTLMHELVQ---ERFKGQQVISIEDPVEIKQD------- 174
Query: 61 IGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 119
++QV + + + +I+ H P+V+I+ EI + A A + GV ++ T
Sbjct: 175 --NVLQLQVNQAIDMTYDNLIKLSLRHRPDVLIIGEIRDKETARAVIRASLTGVTVLSTI 232
Query: 120 HGEWLENIIKNPILSDLIGGVDTVTL 145
H + + + + L DL GVD L
Sbjct: 233 HAKSVAGVYER--LLDL--GVDKSEL 254
>gi|161507246|ref|YP_001577200.1| competence protein [Lactobacillus helveticus DPC 4571]
gi|260102545|ref|ZP_05752782.1| competence protein [Lactobacillus helveticus DSM 20075]
gi|417020872|ref|ZP_11947366.1| competence protein [Lactobacillus helveticus MTCC 5463]
gi|160348235|gb|ABX26909.1| Competence protein [Lactobacillus helveticus DPC 4571]
gi|260083639|gb|EEW67759.1| competence protein [Lactobacillus helveticus DSM 20075]
gi|328461763|gb|EGF33999.1| competence protein [Lactobacillus helveticus MTCC 5463]
Length = 324
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 19/143 (13%)
Query: 6 LHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTAR 65
LH G I+ G G GKTT M EIA+ LS K V+ ++ E+ + S +
Sbjct: 130 LHRGL-IVTSGPTGSGKTTTMYEIAKKLSP--NKVVMTIEDPVEVH-EPKFLQSQVNN-- 183
Query: 66 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW-- 123
+ + ++ +++A H P+++I+ EI + A A G ++ TAH +
Sbjct: 184 -----KAGIDYQSLLKAALRHRPDILIIGEIRDQGTARLAIDAALSGHLVFATAHAKSTL 238
Query: 124 -----LENI-IKNPILSDLIGGV 140
LE++ IKN LS+ + V
Sbjct: 239 QTISRLESLGIKNDELSNCLTAV 261
>gi|425054795|ref|ZP_18458297.1| ComG operon protein 1 family protein [Enterococcus faecium 505]
gi|403035104|gb|EJY46509.1| ComG operon protein 1 family protein [Enterococcus faecium 505]
Length = 334
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 22/137 (16%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV-PE 71
LF G G GKT++M +A L + +++V+ ++ EI + ++Q+ P+
Sbjct: 163 LFSGPVGSGKTSLMYRLA--LKE--KRQVITIEDPVEIEEPFFL---------QLQINPK 209
Query: 72 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII--- 128
+ + +++ H P+++I+ EI E+ AHA A G + T H LE +
Sbjct: 210 IAQTYDTLLKLALRHRPDLLIIGEIRDESTAHAAVRAALTGHRVFATVHARNLEGTLIRI 269
Query: 129 -----KNPILSDLIGGV 140
K LS+ + GV
Sbjct: 270 HELTKKKEELSECLAGV 286
>gi|157113438|ref|XP_001657828.1| ATP-dependent Lon protease, putative [Aedes aegypti]
gi|108877715|gb|EAT41940.1| AAEL006474-PA [Aedes aegypti]
Length = 956
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK + F G PGVGKT++ R IAR L+ E+
Sbjct: 521 GKILCFYGPPGVGKTSIARSIARALNREY 549
>gi|427779555|gb|JAA55229.1| Putative atp-dependent lon protease atp-dependent lon protease
[Rhipicephalus pulchellus]
Length = 990
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK + F G PGVGKT++ R IAR L+ E+
Sbjct: 565 GKILCFYGPPGVGKTSIARSIARALNREY 593
>gi|423395455|ref|ZP_17372656.1| hypothetical protein ICU_01149 [Bacillus cereus BAG2X1-1]
gi|401654866|gb|EJS72405.1| hypothetical protein ICU_01149 [Bacillus cereus BAG2X1-1]
Length = 347
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 11/121 (9%)
Query: 2 VYDLLHYGKSIL-FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
+ L Y +L F G G GKTT M + V+ +R+V ++ E DG +
Sbjct: 129 LLSFLRYSHGLLVFTGPTGSGKTTTMYALLEVMRKRKTRRIVTLEDPVEKRKDGLL---- 184
Query: 61 IGTARRMQVPEPS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 119
++Q+ E + + ++ ++A+ H P++I+V EI E A + G +++ T
Sbjct: 185 -----QIQINEKAGITYETGLKAILRHDPDIILVGEIRDEETAKIAVRASLTGHLVMTTL 239
Query: 120 H 120
H
Sbjct: 240 H 240
>gi|378732411|gb|EHY58870.1| lon protease like, mitochondrial [Exophiala dermatitidis
NIH/UT8656]
Length = 1094
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK + FVG PGVGKT++ + IAR L+ ++ + V + D + EI G G +P I
Sbjct: 581 GKILCFVGPPGVGKTSIGKSIARALNRQYYRFSVGGLTDVA-EIKGHRRTYVGALPGRII 639
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 640 QALKKCQTENP 650
>gi|375086213|ref|ZP_09732635.1| twitching motility protein [Megamonas funiformis YIT 11815]
gi|374566075|gb|EHR37328.1| twitching motility protein [Megamonas funiformis YIT 11815]
Length = 338
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 12/122 (9%)
Query: 4 DLLHYGKS-ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIG 62
D+LH IL G G GK+T + + ++ K ++ ++ I + I
Sbjct: 116 DILHNDNGFILICGATGTGKSTTLASMIEYINQNKSKHIITLEEP--------IEYVFIN 167
Query: 63 TARRMQVPEPSLQHKVMIEAVENHM---PEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 119
+ E + + EA++ M P+VI+V EI AC + AE G +++GT
Sbjct: 168 KKSLIHQREYHVDFENFSEAIKMAMRQDPDVIMVGEIRDTETMKACLNAAETGHLVLGTL 227
Query: 120 HG 121
H
Sbjct: 228 HA 229
>gi|387760448|ref|YP_006067425.1| late competence protein, ABC transporter subunit [Streptococcus
salivarius 57.I]
gi|387784980|ref|YP_006071063.1| late competence protein, ABC transporter subunit [Streptococcus
salivarius JIM8777]
gi|418018752|ref|ZP_12658307.1| late competence protein ComGA [Streptococcus salivarius M18]
gi|338745862|emb|CCB96228.1| late competence protein, ABC transporter subunit [Streptococcus
salivarius JIM8777]
gi|339291215|gb|AEJ52562.1| late competence protein, ABC transporter subunit [Streptococcus
salivarius 57.I]
gi|345526194|gb|EGX29506.1| late competence protein ComGA [Streptococcus salivarius M18]
Length = 313
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 18/146 (12%)
Query: 2 VYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQ-KRVVIVDTSNEIGGDGDIPHSA 60
+ D L Y LF G G GKTT+M E+ + + F+ ++V+ ++ EI D
Sbjct: 125 IMDALDYRGLYLFAGPVGSGKTTLMHELVQ---ERFKGQQVISIEDPVEIKQD------- 174
Query: 61 IGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 119
++QV + + + +I+ H P+V+I+ EI + A A + GV ++ T
Sbjct: 175 --NVLQLQVNQAIDMTYDNLIKLSLRHRPDVLIIGEIRDKETARAVIRASLTGVTVLSTI 232
Query: 120 HGEWLENIIKNPILSDLIGGVDTVTL 145
H + + + + L DL GVD L
Sbjct: 233 HAKSVAGVYER--LLDL--GVDKSEL 254
>gi|407419678|gb|EKF38321.1| dynein heavy chain, putative [Trypanosoma cruzi marinkellei]
Length = 4216
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 11/73 (15%)
Query: 5 LLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTA 64
L+ YGK +LF G+ GVGK+ +M + R +E Q V++ S + +
Sbjct: 2110 LIQYGKPLLFNGQTGVGKSVIMMDYLRRHKEEQQLSVIVFQFSAQTSSE----------- 2158
Query: 65 RRMQVPEPSLQHK 77
R ++ E L+HK
Sbjct: 2159 RTQELIESKLKHK 2171
>gi|361125331|gb|EHK97378.1| putative Lon protease like protein, mitochondrial [Glarea
lozoyensis 74030]
Length = 1083
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK + FVG PGVGKT++ + IAR L+ ++ + V + D + EI G G +P I
Sbjct: 573 GKILCFVGPPGVGKTSIGKSIARALNRQYYRFSVGGLADVA-EIKGHRRTYVGALPGRII 631
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 632 QALKKCQTENP 642
>gi|291542681|emb|CBL15791.1| DNA repair protein RadA [Ruminococcus bromii L2-63]
Length = 455
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 21/125 (16%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 68
G IL G PG+GK+TV+ +I + L D + + + S + AI R+
Sbjct: 91 GSLILLGGDPGIGKSTVLMQICQYLGDTLKILYISGEESKR-----QLKLRAI----RLG 141
Query: 69 VPEPSL------QHKVMIEAVENHMPEVIIVDEIGT------EAEAHACRSIAERGVMLI 116
V P+L +V+ E ++N P+++++D I T + + + E ML+
Sbjct: 142 VTSPNLYVMTETDVEVICEQIKNLKPDLVMIDSIQTMNLSELNSSPGSITQVRESANMLM 201
Query: 117 GTAHG 121
TA G
Sbjct: 202 RTAKG 206
>gi|69244410|ref|ZP_00602826.1| type II secretion system protein E [Enterococcus faecium DO]
gi|293560731|ref|ZP_06677210.1| ComG operon protein 1 [Enterococcus faecium E1162]
gi|383329835|ref|YP_005355719.1| type II/IV secretion system protein [Enterococcus faecium Aus0004]
gi|415888259|ref|ZP_11549074.1| ComG operon protein 1 [Enterococcus faecium E4453]
gi|430832422|ref|ZP_19450468.1| competence protein ComGA [Enterococcus faecium E0333]
gi|430845701|ref|ZP_19463578.1| competence protein ComGA [Enterococcus faecium E1133]
gi|430856725|ref|ZP_19474410.1| competence protein ComGA [Enterococcus faecium E1392]
gi|431238734|ref|ZP_19503603.1| competence protein ComGA [Enterococcus faecium E1622]
gi|431548654|ref|ZP_19519126.1| competence protein ComGA [Enterococcus faecium E1731]
gi|431749515|ref|ZP_19538254.1| competence protein ComGA [Enterococcus faecium E2297]
gi|431755448|ref|ZP_19544097.1| competence protein ComGA [Enterococcus faecium E2883]
gi|431768392|ref|ZP_19556831.1| competence protein ComGA [Enterococcus faecium E1321]
gi|431771639|ref|ZP_19560020.1| competence protein ComGA [Enterococcus faecium E1644]
gi|431773759|ref|ZP_19562076.1| competence protein ComGA [Enterococcus faecium E2369]
gi|431779815|ref|ZP_19568005.1| competence protein ComGA [Enterococcus faecium E4389]
gi|68196351|gb|EAN10779.1| type II secretion system protein E [Enterococcus faecium DO]
gi|291605322|gb|EFF34777.1| ComG operon protein 1 [Enterococcus faecium E1162]
gi|364094923|gb|EHM37034.1| ComG operon protein 1 [Enterococcus faecium E4453]
gi|378939529|gb|AFC64601.1| type II/IV secretion system protein [Enterococcus faecium Aus0004]
gi|430480120|gb|ELA57314.1| competence protein ComGA [Enterococcus faecium E0333]
gi|430540319|gb|ELA80522.1| competence protein ComGA [Enterococcus faecium E1133]
gi|430544161|gb|ELA84205.1| competence protein ComGA [Enterococcus faecium E1392]
gi|430572435|gb|ELB11297.1| competence protein ComGA [Enterococcus faecium E1622]
gi|430590962|gb|ELB29007.1| competence protein ComGA [Enterococcus faecium E1731]
gi|430611429|gb|ELB48519.1| competence protein ComGA [Enterococcus faecium E2297]
gi|430616670|gb|ELB53565.1| competence protein ComGA [Enterococcus faecium E2883]
gi|430629467|gb|ELB65868.1| competence protein ComGA [Enterococcus faecium E1321]
gi|430633056|gb|ELB69239.1| competence protein ComGA [Enterococcus faecium E1644]
gi|430635645|gb|ELB71738.1| competence protein ComGA [Enterococcus faecium E2369]
gi|430641203|gb|ELB77016.1| competence protein ComGA [Enterococcus faecium E4389]
Length = 309
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 22/137 (16%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV-PE 71
LF G G GKT++M +A L ++ Q V+ ++ EI + ++Q+ P+
Sbjct: 138 LFSGPVGSGKTSLMYRLA--LEEKLQ--VITIEDPVEIEEPFFL---------QLQINPK 184
Query: 72 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII--- 128
+ + ++ H P+++I+ EI E+ AHA A G + T H LE +
Sbjct: 185 IAQTYDTLLRLALRHRPDLLIIGEIRDESTAHAAVRAALTGHRVFATVHARNLEGTLVRI 244
Query: 129 -----KNPILSDLIGGV 140
K LS+ + GV
Sbjct: 245 HELTKKKEELSECLAGV 261
>gi|304311965|ref|YP_003811563.1| hypothetical protein HDN1F_23370 [gamma proteobacterium HdN1]
gi|301797698|emb|CBL45920.1| hypothetical protein HDN1F_23370 [gamma proteobacterium HdN1]
Length = 700
Score = 38.5 bits (88), Expect = 2.3, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 14/96 (14%)
Query: 6 LHYGKSILFV-GRPGVGKTTVMREIARVL-SDEFQKRVVIVDTSNEIGGDGDIPHSAIGT 63
LHYG IL + G PG GK+T+ ++ R L +DEF ++ VD +
Sbjct: 81 LHYGDDILLLWGEPGAGKSTLFGQLVRTLRADEFT--LIFVDARRA----ATVESLWSAL 134
Query: 64 ARRMQVPE-----PSLQHKVMIEAVENHMPEVIIVD 94
+ R+++P +L+H+ E ++H P V +VD
Sbjct: 135 SARLRLPAGIEGWEALKHEAA-ELADHHQPLVFLVD 169
>gi|288932695|ref|YP_003436755.1| ATPase associated with various cellular activities AAA_5
[Ferroglobus placidus DSM 10642]
gi|288894943|gb|ADC66480.1| ATPase associated with various cellular activities AAA_5
[Ferroglobus placidus DSM 10642]
Length = 473
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 1 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSD 35
MV + L G SILFVG+ G GKTT + IA++L +
Sbjct: 72 MVKNALISGSSILFVGKKGYGKTTFSKSIAKLLPE 106
>gi|429738124|ref|ZP_19271943.1| ATPase family protein [Prevotella saccharolytica F0055]
gi|429161000|gb|EKY03441.1| ATPase family protein [Prevotella saccharolytica F0055]
Length = 841
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 84/192 (43%), Gaps = 45/192 (23%)
Query: 13 LFVGRPGVGKTTVMREIARVLSDE------FQKRVVIVDTSNEIGGDGDIPHSAIGTARR 66
+ +G PGVGK+ ++ +A++++ F KR+V +D + + GT R
Sbjct: 233 IIIGEPGVGKSAIVEGLAQLIAKRKTSPVLFNKRIVSLDMAGIVA----------GTKYR 282
Query: 67 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW-LE 125
Q E + + +++ +EN+ ++ +DEI T ++ G+ G
Sbjct: 283 GQFEE---RIRGLLKEIENNADIIVFIDEIHT--------------LIGAGSTPGSMDAA 325
Query: 126 NIIKNPILSDLIGGVDTVTLGD-------EEARARRCQKSILE-RKAPPTFYFLIEMR-- 175
NI+K + I V TL + + A RR QK +LE A T L ++
Sbjct: 326 NIMKPALARGTIQCVGATTLDEYRKSIEKDGALERRFQKVLLEPTTADETLQILENIKDR 385
Query: 176 -ERHYWVTHKTE 186
ERH+ V++ E
Sbjct: 386 YERHHHVSYTDE 397
>gi|381182774|ref|ZP_09891561.1| general secretion pathway protein E [Listeriaceae bacterium TTU
M1-001]
gi|380317342|gb|EIA20674.1| general secretion pathway protein E [Listeriaceae bacterium TTU
M1-001]
Length = 336
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 10/118 (8%)
Query: 12 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 71
LF G G GK+T M + L+ + +K+V+ ++ E + +++V E
Sbjct: 139 FLFSGSTGSGKSTSMYSLVSELTHQTEKQVITIEDPVEHYHQDFL---------QVEVNE 189
Query: 72 -PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 128
L + +I ++ H P+V+I+ EI A A G ++I T H L II
Sbjct: 190 RAGLTYGTIIRSILRHDPDVLIIGEIRDAETAQMATGSALTGHLVISTIHASSLTGII 247
>gi|228477980|ref|ZP_04062591.1| late competence protein, ABC transporter subunit [Streptococcus
salivarius SK126]
gi|421453310|ref|ZP_15902666.1| ComG operon protein 1 [Streptococcus salivarius K12]
gi|228250160|gb|EEK09413.1| late competence protein, ABC transporter subunit [Streptococcus
salivarius SK126]
gi|400181619|gb|EJO15886.1| ComG operon protein 1 [Streptococcus salivarius K12]
Length = 313
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 18/146 (12%)
Query: 2 VYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQ-KRVVIVDTSNEIGGDGDIPHSA 60
+ D L Y LF G G GKTT+M E+ + + F+ ++V+ ++ EI D
Sbjct: 125 IMDALDYRGLYLFAGPVGSGKTTLMHELVQ---ERFKGQQVISIEDPVEIKQD------- 174
Query: 61 IGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 119
++QV + + + +I+ H P+V+I+ EI + A A + GV ++ T
Sbjct: 175 --NVLQLQVNQAIDMTYDNLIKLSLRHRPDVLIIGEIRDKETARAVIRASLTGVTVLSTI 232
Query: 120 HGEWLENIIKNPILSDLIGGVDTVTL 145
H + + + + L DL GVD L
Sbjct: 233 HAKSVAGVYER--LLDL--GVDKSEL 254
>gi|313665404|ref|YP_004047275.1| endopeptidase La [Mycoplasma leachii PG50]
gi|392388841|ref|YP_005907250.1| ATP-dependent protease La [Mycoplasma leachii 99/014/6]
gi|312949218|gb|ADR23814.1| endopeptidase La [Mycoplasma leachii PG50]
gi|339276486|emb|CBV67065.1| ATP-dependent protease La [Mycoplasma leachii 99/014/6]
Length = 779
Score = 38.5 bits (88), Expect = 2.3, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQK-RVVIVDTSNEIGGD-----GDIPHSAIG 62
G I FVG PGVGKT++ R IA L +F K + V +EI G G +P I
Sbjct: 352 GPIITFVGPPGVGKTSLARSIAEALGKKFVKVSLGGVKDESEIRGHRKTYVGSMPGRIIQ 411
Query: 63 TARRMQVPEP 72
+R +V P
Sbjct: 412 ALKRAKVKNP 421
>gi|90076144|dbj|BAE87752.1| unnamed protein product [Macaca fascicularis]
Length = 394
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK + F G PGVGKT++ R IAR L+ E+
Sbjct: 320 GKILCFYGPPGVGKTSIARSIARALNREY 348
>gi|90962737|ref|YP_536652.1| ATPase [Lactobacillus salivarius UCC118]
gi|385839674|ref|YP_005877421.1| ATPase [Lactobacillus salivarius CECT 5713]
gi|90821931|gb|ABE00569.1| ATPase of the AAA+ class [Lactobacillus salivarius UCC118]
gi|300215370|gb|ADJ79783.1| ATPase of the AAA+ class [Lactobacillus salivarius CECT 5713]
Length = 925
Score = 38.1 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 20/39 (51%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Query: 4 DLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV 42
D +H LF G PG GKTTV R IA +L +QKRV+
Sbjct: 422 DKIHTSMHSLFFGNPGTGKTTVARIIADIL---YQKRVI 457
>gi|414084368|ref|YP_006993076.1| type II/IV secretion system family protein [Carnobacterium
maltaromaticum LMA28]
gi|412997952|emb|CCO11761.1| type II/IV secretion system family protein [Carnobacterium
maltaromaticum LMA28]
Length = 354
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 89/221 (40%), Gaps = 33/221 (14%)
Query: 12 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV-P 70
ILF G G GKTT M ++ + + +V ++ EI + + QV P
Sbjct: 140 ILFSGPVGSGKTTTMFQLIKEFVGKENCQVFTIEDPVEIQETLFL---------QTQVNP 190
Query: 71 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 130
+ + + ++I+A H P++I+V EI + A A G +++ + H + E ++K
Sbjct: 191 KAGIGYDLLIKASLRHHPDIIVVGEIRDQETAKMVIRAALTGHLIVSSIHAKNGEGVVKR 250
Query: 131 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFY------------FLIEMRERH 178
+ LG + ++ ++ +K P + FL +R
Sbjct: 251 -----------LLELGVSAQQIKQSLIGVISQKLVPQYCPFCQGECHLYCSFLAVYAKRS 299
Query: 179 YWVTHKTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTY 219
T + ++ L+ G + + K+ FN + + +Y
Sbjct: 300 VIYETLTGRELEGLMEGGDAQINLEKQTKSFNYYLRKAYSY 340
>gi|355703024|gb|EHH29515.1| Lon protease-like protein, mitochondrial [Macaca mulatta]
Length = 896
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK + F G PGVGKT++ R IAR L+ E+
Sbjct: 382 GKILCFYGPPGVGKTSIARSIARALNREY 410
>gi|348522734|ref|XP_003448879.1| PREDICTED: lon protease homolog, mitochondrial-like [Oreochromis
niloticus]
Length = 1002
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK + F G PGVGKT++ R IAR L+ E+
Sbjct: 567 GKILCFYGPPGVGKTSIARSIARALNREY 595
>gi|367022718|ref|XP_003660644.1| hypothetical protein MYCTH_2299177 [Myceliophthora thermophila ATCC
42464]
gi|347007911|gb|AEO55399.1| hypothetical protein MYCTH_2299177 [Myceliophthora thermophila ATCC
42464]
Length = 1096
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK + FVG PGVGKT++ + IAR L+ E+
Sbjct: 586 GKILCFVGPPGVGKTSIGKSIARALNREY 614
>gi|226295412|gb|EEH50832.1| DNA repair and recombination protein pif1 [Paracoccidioides
brasiliensis Pb18]
Length = 759
Score = 38.1 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQK 39
GKSI F G G GK+ +MREI R L ++++K
Sbjct: 252 GKSIFFTGSAGTGKSVLMREIIRKLREKYKK 282
>gi|295670673|ref|XP_002795884.1| DNA repair and recombination protein pif1 [Paracoccidioides sp.
'lutzii' Pb01]
gi|226284969|gb|EEH40535.1| DNA repair and recombination protein pif1 [Paracoccidioides sp.
'lutzii' Pb01]
Length = 797
Score = 38.1 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQK 39
GKSI F G G GK+ +MREI R L ++++K
Sbjct: 290 GKSIFFTGSAGTGKSVLMREIIRKLREKYKK 320
>gi|116196404|ref|XP_001224014.1| hypothetical protein CHGG_04800 [Chaetomium globosum CBS 148.51]
gi|88180713|gb|EAQ88181.1| hypothetical protein CHGG_04800 [Chaetomium globosum CBS 148.51]
Length = 971
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK + FVG PGVGKT++ + IAR L+ E+
Sbjct: 515 GKILCFVGPPGVGKTSIGKSIARALNREY 543
>gi|449266825|gb|EMC77822.1| Lon protease like protein, mitochondrial, partial [Columba livia]
Length = 699
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK + F G PGVGKT++ R IAR L+ E+
Sbjct: 372 GKILCFYGPPGVGKTSIARSIARALNREY 400
>gi|363754349|ref|XP_003647390.1| hypothetical protein Ecym_6190 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891027|gb|AET40573.1| hypothetical protein Ecym_6190 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1096
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK + FVG PGVGKT++ + IAR L+ +F + V + D + EI G G +P I
Sbjct: 582 GKIVCFVGPPGVGKTSIGKSIARSLNRKFFRFSVGGMADVA-EIKGHRRTYIGALPGRII 640
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 641 QALKKCQTQNP 651
>gi|389634279|ref|XP_003714792.1| lon protease like protein [Magnaporthe oryzae 70-15]
gi|351647125|gb|EHA54985.1| lon protease like protein [Magnaporthe oryzae 70-15]
gi|440468530|gb|ELQ37689.1| ATP-dependent protease La [Magnaporthe oryzae Y34]
gi|440485188|gb|ELQ65167.1| ATP-dependent protease La [Magnaporthe oryzae P131]
Length = 1119
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK + FVG PGVGKT++ + IAR L+ E+
Sbjct: 596 GKILCFVGPPGVGKTSIGKSIARALNREY 624
>gi|383783573|ref|YP_005468140.1| hypothetical protein LFE_0288 [Leptospirillum ferrooxidans C2-3]
gi|383082483|dbj|BAM06010.1| hypothetical protein LFE_0288 [Leptospirillum ferrooxidans C2-3]
Length = 290
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 16 GRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIG 51
G+ GVGKT V +A VL+D F+KRV+I D +G
Sbjct: 33 GKGGVGKTNVAANLAYVLADTFKKRVLIFDADLGLG 68
>gi|308503414|ref|XP_003113891.1| CRE-MMAA-1 protein [Caenorhabditis remanei]
gi|308263850|gb|EFP07803.1| CRE-MMAA-1 protein [Caenorhabditis remanei]
Length = 399
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 81/178 (45%), Gaps = 39/178 (21%)
Query: 8 YGK-SILF----VGRPGVGKTTVMREIARVLSDEFQKRVVIVD---TSNEIGGDGDIPHS 59
YG+ S++F G PGVGK++ + + L++ K+V ++ TS GG S
Sbjct: 118 YGRDSMIFRVGISGSPGVGKSSFIEALGAELTENRGKKVAVLTIDPTSAMTGG------S 171
Query: 60 AIGTARRMQVPEPSLQHKVMI-----------------EAV---ENHMPEVIIVDEIGTE 99
+G RMQ E S K I EAV E +++I++ +G
Sbjct: 172 VLGDLTRMQ--ELSRNPKAYIRQSPTSGSLGGVTRGIHEAVILCEGAGYDIVIIETVGVG 229
Query: 100 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPI-LSDLIGGVDTVTLGDEEARARRCQ 156
+ + + +L+ AHG+ L+ + + + +SDL+ V T GD +A+A+ Q
Sbjct: 230 QSETSVSDMCDMMCLLLSPAHGDELQGVKRGIMEMSDLL--VVTKDDGDLQAKAKMTQ 285
>gi|114674816|ref|XP_001143707.1| PREDICTED: lon protease homolog, mitochondrial isoform 1 [Pan
troglodytes]
Length = 763
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK + F G PGVGKT++ R IAR L+ E+
Sbjct: 320 GKILCFYGPPGVGKTSIARSIARALNREY 348
>gi|449491498|ref|XP_002189153.2| PREDICTED: lon protease homolog, mitochondrial [Taeniopygia
guttata]
Length = 837
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK + F G PGVGKT++ R IAR L+ E+
Sbjct: 401 GKILCFYGPPGVGKTSIARSIARALNREY 429
>gi|358345778|ref|XP_003636952.1| ATPase family AAA domain-containing protein 2B, partial [Medicago
truncatula]
gi|355502887|gb|AES84090.1| ATPase family AAA domain-containing protein 2B, partial [Medicago
truncatula]
Length = 843
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 29/133 (21%)
Query: 10 KSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 69
+ +L G PG GKT + R +A S QK S + D+ +G A R
Sbjct: 405 RGVLLCGPPGTGKTLIARALACAASKAGQK------VSFYMRKGADVLSKWVGEAER--- 455
Query: 70 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 129
Q K++ E + + P +I DEI G+ + ++ E + N I
Sbjct: 456 -----QLKLLFEEAQRNQPSIIFFDEID--------------GLAPVRSSKSEQIHNSIV 496
Query: 130 NPILSDLIGGVDT 142
+ +L+ L+ G+D+
Sbjct: 497 STLLA-LMDGLDS 508
>gi|351712197|gb|EHB15116.1| Lon protease-like protein, mitochondrial [Heterocephalus glaber]
Length = 895
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK + F G PGVGKT++ R IAR L+ E+
Sbjct: 450 GKILCFYGPPGVGKTSIARSIARALNREY 478
>gi|367045890|ref|XP_003653325.1| hypothetical protein THITE_2115636 [Thielavia terrestris NRRL 8126]
gi|347000587|gb|AEO66989.1| hypothetical protein THITE_2115636 [Thielavia terrestris NRRL 8126]
Length = 1095
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK + FVG PGVGKT++ + IAR L+ E+
Sbjct: 583 GKILCFVGPPGVGKTSIGKSIARALNREY 611
>gi|326934254|ref|XP_003213207.1| PREDICTED: lon protease homolog, mitochondrial-like [Meleagris
gallopavo]
Length = 815
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK + F G PGVGKT++ R IAR L+ E+
Sbjct: 379 GKILCFYGPPGVGKTSIARSIARALNREY 407
>gi|42560989|ref|NP_975440.1| endopeptidase La [Mycoplasma mycoides subsp. mycoides SC str. PG1]
gi|81829387|sp|Q6MTF4.1|LON_MYCMS RecName: Full=Lon protease; AltName: Full=ATP-dependent protease La
gi|42492486|emb|CAE77082.1| endopeptidase La [Mycoplasma mycoides subsp. mycoides SC str. PG1]
Length = 796
Score = 38.1 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQK-RVVIVDTSNEIGGD-----GDIPHSAIG 62
G I FVG PGVGKT++ R IA L +F K + V +EI G G +P I
Sbjct: 369 GPIITFVGPPGVGKTSLARSIAEALGKKFVKVSLGGVKDESEIRGHRKTYVGSMPGRIIQ 428
Query: 63 TARRMQVPEP 72
+R +V P
Sbjct: 429 ALKRAKVKNP 438
>gi|423406330|ref|ZP_17383479.1| hypothetical protein ICY_01015 [Bacillus cereus BAG2X1-3]
gi|401660324|gb|EJS77806.1| hypothetical protein ICY_01015 [Bacillus cereus BAG2X1-3]
Length = 347
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 11/121 (9%)
Query: 2 VYDLLHYGKSIL-FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
+ L Y +L F G G GKTT M + V+ +R+V ++ E DG +
Sbjct: 129 LLSFLRYSHGLLVFTGPTGSGKTTTMYALLEVMRKRKTRRIVTLEDPVEKRKDGLL---- 184
Query: 61 IGTARRMQVPEPS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 119
++Q+ E + + ++ ++A+ H P++I+V EI E A + G +++ T
Sbjct: 185 -----QIQINEKAGITYETGLKAILRHDPDIILVGEIRDEETAKIAVRASLTGHLVMTTL 239
Query: 120 H 120
H
Sbjct: 240 H 240
>gi|397497085|ref|XP_003819347.1| PREDICTED: lon protease homolog, mitochondrial isoform 4 [Pan
paniscus]
Length = 763
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK + F G PGVGKT++ R IAR L+ E+
Sbjct: 320 GKILCFYGPPGVGKTSIARSIARALNREY 348
>gi|451327636|ref|NP_001263409.1| lon protease homolog, mitochondrial isoform 3 [Homo sapiens]
Length = 763
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK + F G PGVGKT++ R IAR L+ E+
Sbjct: 320 GKILCFYGPPGVGKTSIARSIARALNREY 348
>gi|397497079|ref|XP_003819344.1| PREDICTED: lon protease homolog, mitochondrial isoform 1 [Pan
paniscus]
gi|397497083|ref|XP_003819346.1| PREDICTED: lon protease homolog, mitochondrial isoform 3 [Pan
paniscus]
Length = 845
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK + F G PGVGKT++ R IAR L+ E+
Sbjct: 402 GKILCFYGPPGVGKTSIARSIARALNREY 430
>gi|363743617|ref|XP_001232112.2| PREDICTED: lon protease homolog, mitochondrial [Gallus gallus]
Length = 843
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK + F G PGVGKT++ R IAR L+ E+
Sbjct: 407 GKILCFYGPPGVGKTSIARSIARALNREY 435
>gi|345323907|ref|XP_001506549.2| PREDICTED: lon protease homolog, mitochondrial, partial
[Ornithorhynchus anatinus]
Length = 829
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK + F G PGVGKT++ R IAR L+ E+
Sbjct: 417 GKILCFYGPPGVGKTSIARSIARALNREY 445
>gi|256383719|gb|ACU78289.1| ATP-dependent protease La [Mycoplasma mycoides subsp. capri str.
GM12]
gi|256384550|gb|ACU79119.1| ATP-dependent protease La [Mycoplasma mycoides subsp. capri str.
GM12]
gi|296455851|gb|ADH22086.1| ATP-dependent protease La [synthetic Mycoplasma mycoides
JCVI-syn1.0]
Length = 786
Score = 38.1 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQK-RVVIVDTSNEIGGD-----GDIPHSAIG 62
G I FVG PGVGKT++ R IA L +F K + V +EI G G +P I
Sbjct: 356 GPIITFVGPPGVGKTSLARSIAEALGKKFVKVSLGGVKDESEIRGHRKTYVGSMPGRIIQ 415
Query: 63 TARRMQVPEP 72
+R +V P
Sbjct: 416 ALKRAKVKNP 425
>gi|397497081|ref|XP_003819345.1| PREDICTED: lon protease homolog, mitochondrial isoform 2 [Pan
paniscus]
Length = 893
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK + F G PGVGKT++ R IAR L+ E+
Sbjct: 450 GKILCFYGPPGVGKTSIARSIARALNREY 478
>gi|225677467|gb|EEH15751.1| DNA repair and recombination protein pif1 [Paracoccidioides
brasiliensis Pb03]
Length = 798
Score = 38.1 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQK 39
GKSI F G G GK+ +MREI R L ++++K
Sbjct: 291 GKSIFFTGSAGTGKSVLMREIIRKLREKYKK 321
>gi|225375666|ref|ZP_03752887.1| hypothetical protein ROSEINA2194_01291 [Roseburia inulinivorans DSM
16841]
gi|225212523|gb|EEG94877.1| hypothetical protein ROSEINA2194_01291 [Roseburia inulinivorans DSM
16841]
Length = 451
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 4 DLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDT-SNEIG----GDGDIPH 58
+ L YG SI G GKTT+ + + D KR+ ++ S E+ DG + +
Sbjct: 207 ECLRYGISICVAGATSSGKTTLAGWLLTTIPD--GKRIFTIENGSRELALVREKDGKVTN 264
Query: 59 SAIGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIG 117
S I T R E ++ ++++ PE+I V E+ + +EA+ + A G ++
Sbjct: 265 SVIHTLTRYSENEKQNIDQDMLLDMALRFNPEIICVGEMRS-SEAYTAQESARTGHTVLT 323
Query: 118 TAHGEWLEN 126
T H E+
Sbjct: 324 TIHSNSCES 332
>gi|193788396|dbj|BAG53290.1| unnamed protein product [Homo sapiens]
Length = 845
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK + F G PGVGKT++ R IAR L+ E+
Sbjct: 402 GKILCFYGPPGVGKTSIARSIARALNREY 430
>gi|193786407|dbj|BAG51690.1| unnamed protein product [Homo sapiens]
Length = 763
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK + F G PGVGKT++ R IAR L+ E+
Sbjct: 320 GKILCFYGPPGVGKTSIARSIARALNREY 348
>gi|414046|emb|CAA52291.1| Lon protease-like protein [Homo sapiens]
Length = 845
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK + F G PGVGKT++ R IAR L+ E+
Sbjct: 402 GKILCFYGPPGVGKTSIARSIARALNREY 430
>gi|417413065|gb|JAA52879.1| Putative lon protease log mitochondrial, partial [Desmodus
rotundus]
Length = 900
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK + F G PGVGKT++ R IAR L+ E+
Sbjct: 458 GKILCFYGPPGVGKTSIARSIARALNREY 486
>gi|312862399|ref|ZP_07722642.1| type II/IV secretion system protein [Streptococcus vestibularis
F0396]
gi|311102042|gb|EFQ60242.1| type II/IV secretion system protein [Streptococcus vestibularis
F0396]
Length = 640
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 18/146 (12%)
Query: 2 VYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQ-KRVVIVDTSNEIGGDGDIPHSA 60
+ D L Y LF G G GKTT+M E+ + + F+ ++V+ ++ EI D +
Sbjct: 125 IKDALDYRGLYLFAGPVGSGKTTLMHELVQ---ERFKGQQVISIEDPVEIKQDNVL---- 177
Query: 61 IGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 119
++QV + + + +I+ H P+V+I+ EI + A A + GV ++ T
Sbjct: 178 -----QLQVNQAIDMTYDNLIKLSLRHRPDVLIIGEIRDKETARAVIRASLTGVTVLSTI 232
Query: 120 HGEWLENIIKNPILSDLIGGVDTVTL 145
H + + + + L DL GVD L
Sbjct: 233 HAKSVAGVYER--LLDL--GVDKSEL 254
>gi|406602690|emb|CCH45738.1| hypothetical protein BN7_5324 [Wickerhamomyces ciferrii]
Length = 1073
Score = 38.1 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 13/89 (14%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 68
GK I FVG PGVGKT++ + IAR L+ F + +GG D+ S I RR
Sbjct: 595 GKIICFVGPPGVGKTSIGKSIARALNRNFFRI--------SVGGLTDV--SEIKGHRRTY 644
Query: 69 VPEPSLQHKVMIEAVENH-MPEVIIVDEI 96
V ++ +++ + H M +I++DEI
Sbjct: 645 V--GAMPGRIIQALKKTHTMNPMILIDEI 671
>gi|297275872|ref|XP_001088663.2| PREDICTED: lon protease homolog, mitochondrial-like [Macaca
mulatta]
Length = 1098
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 39/70 (55%), Gaps = 8/70 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGDGDIP-HSAIGTAR 65
GK + F G PGVGKT++ R IAR L+ E+ + V + D + EI G P S+ G A
Sbjct: 516 GKILCFYGPPGVGKTSIARSIARALNREYFRFSVGGMTDVA-EIKGHRYAPSSSSSGPA- 573
Query: 66 RMQVPEPSLQ 75
VP P LQ
Sbjct: 574 ---VPRPELQ 580
>gi|242010739|ref|XP_002426116.1| Replication factor C subunit, putative [Pediculus humanus corporis]
gi|212510163|gb|EEB13378.1| Replication factor C subunit, putative [Pediculus humanus corporis]
Length = 338
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 11 SILFVGRPGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 69
+IL G PGVGKTT + +AR+ L F++ V+ ++ SN+ G D + I + +V
Sbjct: 54 NILIAGPPGVGKTTTILCLARILLGPSFKEAVLELNASNDRG--IDTVRNKIKMFAQQKV 111
Query: 70 PEPSLQHKVMI 80
P +HK+++
Sbjct: 112 TLPKGKHKIIV 122
>gi|194391228|dbj|BAG60732.1| unnamed protein product [Homo sapiens]
Length = 893
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK + F G PGVGKT++ R IAR L+ E+
Sbjct: 450 GKILCFYGPPGVGKTSIARSIARALNREY 478
>gi|156045093|ref|XP_001589102.1| hypothetical protein SS1G_09735 [Sclerotinia sclerotiorum 1980]
gi|154694130|gb|EDN93868.1| hypothetical protein SS1G_09735 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1077
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK + FVG PGVGKT++ + IAR L+ ++ + V + D + EI G G +P I
Sbjct: 572 GKILCFVGPPGVGKTSIGKSIARALNRQYYRFSVGGLTDVA-EIKGHRRTYVGALPGRII 630
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 631 QALKKCQTENP 641
>gi|403295939|ref|XP_003938879.1| PREDICTED: lon protease homolog, mitochondrial isoform 2 [Saimiri
boliviensis boliviensis]
Length = 763
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK + F G PGVGKT++ R IAR L+ E+
Sbjct: 320 GKILCFYGPPGVGKTSIARSIARALNREY 348
>gi|292625925|ref|XP_691712.4| PREDICTED: lon protease homolog, mitochondrial [Danio rerio]
Length = 966
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK + F G PGVGKT++ R IAR L+ E+
Sbjct: 530 GKILCFYGPPGVGKTSIARSIARALNREY 558
>gi|403216711|emb|CCK71207.1| hypothetical protein KNAG_0G01490 [Kazachstania naganishii CBS
8797]
Length = 1061
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK + FVG PGVGKT++ + IAR L +F + V + D + EI G G +P I
Sbjct: 549 GKILCFVGPPGVGKTSIGKSIARALHRQFFRFSVGGMTDVA-EIKGHRRTYIGALPGRII 607
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 608 QALKKCQTENP 618
>gi|326432026|gb|EGD77596.1| Lonp1 protein [Salpingoeca sp. ATCC 50818]
Length = 1082
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 24/32 (75%)
Query: 8 YGKSILFVGRPGVGKTTVMREIARVLSDEFQK 39
+GK + FVG PGVGKT++ + IA+ L+ E+ +
Sbjct: 647 HGKILTFVGPPGVGKTSIAKSIAKALNREYYR 678
>gi|410950123|ref|XP_003981761.1| PREDICTED: LOW QUALITY PROTEIN: lon protease homolog, mitochondrial
[Felis catus]
Length = 960
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK + F G PGVGKT++ R IAR L+ E+
Sbjct: 517 GKILCFYGPPGVGKTSIARSIARALNREY 545
>gi|423657201|ref|ZP_17632500.1| hypothetical protein IKG_04189 [Bacillus cereus VD200]
gi|401289944|gb|EJR95648.1| hypothetical protein IKG_04189 [Bacillus cereus VD200]
Length = 347
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 11/121 (9%)
Query: 2 VYDLLHYGKSIL-FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 60
+ L Y + +L F G G GKTT M + V+ + +R++ ++ E D I
Sbjct: 129 LLSFLRYSQGLLVFTGPTGSGKTTTMYALLEVIRKKKTRRIITLEDPVEKRSDDVI---- 184
Query: 61 IGTARRMQVPEPS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 119
++Q+ E + L ++ ++A+ H P++I+V EI E A + G +++ T
Sbjct: 185 -----QIQINEKAGLTYETGLKAILRHDPDIILVGEIRDEETAKIAIRASLTGHLVMTTL 239
Query: 120 H 120
H
Sbjct: 240 H 240
>gi|346975365|gb|EGY18817.1| ATP-dependent protease La [Verticillium dahliae VdLs.17]
Length = 1110
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 61
GK + FVG PGVGKT++ + IAR L+ ++ + V + D + EI G G +P I
Sbjct: 611 GKILCFVGPPGVGKTSIGKSIARALNRQYYRFSVGGLTDVA-EIKGHRRTYVGALPGRII 669
Query: 62 GTARRMQVPEP 72
++ Q P
Sbjct: 670 QALKKCQTENP 680
>gi|126323252|ref|XP_001376069.1| PREDICTED: lon protease homolog, mitochondrial [Monodelphis
domestica]
Length = 973
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK + F G PGVGKT++ R IAR L+ E+
Sbjct: 533 GKILCFYGPPGVGKTSIARSIARALNREY 561
>gi|432102016|gb|ELK29836.1| Lon protease like protein, mitochondrial [Myotis davidii]
Length = 843
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK + F G PGVGKT++ R IAR L+ E+
Sbjct: 401 GKILCFYGPPGVGKTSIARSIARALNREY 429
>gi|83318181|gb|AAI09219.1| LONP1 protein [Homo sapiens]
Length = 848
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEF 37
GK + F G PGVGKT++ R IAR L+ E+
Sbjct: 405 GKILCFYGPPGVGKTSIARSIARALNREY 433
>gi|414591240|tpg|DAA41811.1| TPA: hypothetical protein ZEAMMB73_646898 [Zea mays]
Length = 582
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 11/96 (11%)
Query: 9 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 68
GK I G PGVGKT++ R IAR L+ +F + +GG D+ + I RR
Sbjct: 403 GKIICLSGPPGVGKTSIGRSIARALNRQFYRF--------SVGGLADV--AEIKGHRRTY 452
Query: 69 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHA 104
V + +++V P ++++DEI + H+
Sbjct: 453 VGAMPGKMVQCLKSVGTANP-LVLIDEIDKLGKGHS 487
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.138 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,558,738,081
Number of Sequences: 23463169
Number of extensions: 138527980
Number of successful extensions: 722819
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 1125
Number of HSP's that attempted gapping in prelim test: 720928
Number of HSP's gapped (non-prelim): 2013
length of query: 224
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 87
effective length of database: 9,144,741,214
effective search space: 795592485618
effective search space used: 795592485618
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 74 (33.1 bits)