BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027393
(224 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5UP57|P4H_MIMIV Putative prolyl 4-hydroxylase OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_L593 PE=1 SV=1
Length = 242
Score = 84.0 bits (206), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 72/135 (53%), Gaps = 13/135 (9%)
Query: 90 LVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKYPMIQ 149
VL+N ++ +C + A L D++ G N+R S M++S K PM++
Sbjct: 61 FVLNNLINPTKCQEIMQFANGKL-----FDSQVLSGTDKNIRNSQQMWIS---KNNPMVK 112
Query: 150 AIEKRISVFSQVPVENGELIQVLRYEKDQYYKPHHDYFSDTFN-----LKRGGQRIATML 204
I + I VP +N E +QV+RY +QYY HHD D+ ++RGGQRI T+L
Sbjct: 113 PIFENICRQFNVPFDNAEDLQVVRYLPNQYYNEHHDSCCDSSKQCSEFIERGGQRILTVL 172
Query: 205 MYLSDNVEGGETYFP 219
+YL++ G TYFP
Sbjct: 173 IYLNNEFSDGHTYFP 187
>sp|P16924|P4HA1_CHICK Prolyl 4-hydroxylase subunit alpha-1 OS=Gallus gallus GN=P4HA1 PE=1
SV=1
Length = 516
Score = 82.0 bits (201), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 88/178 (49%), Gaps = 13/178 (7%)
Query: 48 RRQKNGYLQLPRGVTFWDNDKEAELLRLGYVKPEVISWSPRILVLHNFLSMEECDYLRAI 107
RRQK + + ++D ++ + LG VK E PRI+ + +S EE + ++ +
Sbjct: 285 RRQKRLFCR------YYDGNRNPRYI-LGPVKQEDEWDKPRIVRFLDIISDEEIETVKEL 337
Query: 108 ARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKYPMIQAIEKRISVFSQVPVENGE 167
A+P L +TV D +TGK ++ R S +LS E P++ I RI + + V E
Sbjct: 338 AKPRLSRATVHDPETGKLTTAHYRVSKSAWLSGYES--PVVSRINTRIQDLTGLDVSTAE 395
Query: 168 LIQVLRYEKDQYYKPHHDYFS----DTFNLKRGGQRIATMLMYLSDNVEGGETYFPMV 221
+QV Y Y+PH D+ D F G RIAT L Y+SD GG T FP V
Sbjct: 396 ELQVANYGVGGQYEPHFDFGRKDEPDAFKELGTGNRIATWLFYMSDVSAGGATVFPEV 453
>sp|Q5ZLK5|P4HA2_CHICK Prolyl 4-hydroxylase subunit alpha-2 OS=Gallus gallus GN=P4HA2 PE=2
SV=1
Length = 534
Score = 81.6 bits (200), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 75/136 (55%), Gaps = 4/136 (2%)
Query: 86 SPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKY 145
SP I+ ++ +S EE + ++ +A+P L +TV D KTG ++ R S +L EE
Sbjct: 336 SPHIVRYYDVMSDEEIEKIKQLAKPKLARATVRDPKTGVLTVASYRVSKSSWL--EEDDD 393
Query: 146 PMIQAIEKRISVFSQVPVENGELIQVLRYEKDQYYKPHHDYFSDTFN--LKRGGQRIATM 203
P++ + +R+ + + V+ EL+QV Y Y+PH D+ F+ LK G R+AT
Sbjct: 394 PVVAKVNQRMQQITGLTVKTAELLQVANYGMGGQYEPHFDFSRRPFDSTLKSEGNRLATF 453
Query: 204 LMYLSDNVEGGETYFP 219
L Y+SD GG T FP
Sbjct: 454 LNYMSDVEAGGATVFP 469
>sp|O15460|P4HA2_HUMAN Prolyl 4-hydroxylase subunit alpha-2 OS=Homo sapiens GN=P4HA2 PE=1
SV=1
Length = 535
Score = 80.9 bits (198), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 74/138 (53%), Gaps = 6/138 (4%)
Query: 86 SPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKY 145
SP I+ ++ +S EE + ++ IA+P L +TV D KTG ++ R S +L EE
Sbjct: 335 SPHIVRYYDVMSDEEIERIKEIAKPKLARATVRDPKTGVLTVASYRVSKSSWL--EEDDD 392
Query: 146 PMIQAIEKRISVFSQVPVENGELIQVLRYEKDQYYKPHHDYF----SDTFNLKRGGQRIA 201
P++ + +R+ + + V+ EL+QV Y Y+PH D+ DTF G R+A
Sbjct: 393 PVVARVNRRMQHITGLTVKTAELLQVANYGVGGQYEPHFDFSRNDERDTFKHLGTGNRVA 452
Query: 202 TMLMYLSDNVEGGETYFP 219
T L Y+SD GG T FP
Sbjct: 453 TFLNYMSDVEAGGATVFP 470
>sp|P54001|P4HA1_RAT Prolyl 4-hydroxylase subunit alpha-1 OS=Rattus norvegicus GN=P4ha1
PE=2 SV=2
Length = 534
Score = 80.9 bits (198), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 87 PRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKYP 146
PRI+ H+ +S E + ++ +A+P L +TV D +TGK + R S +LS E P
Sbjct: 335 PRIIRFHDIISDAEIEIVKDLAKPRLSRATVHDPETGKLTTAQYRVSKSAWLSGYED--P 392
Query: 147 MIQAIEKRISVFSQVPVENGELIQVLRYEKDQYYKPHHDYFS----DTFNLKRGGQRIAT 202
++ I RI + + V E +QV Y Y+PH D+ D F G RIAT
Sbjct: 393 VVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFRELGTGNRIAT 452
Query: 203 MLMYLSDNVEGGETYFPMV 221
L Y+SD GG T FP V
Sbjct: 453 WLFYMSDVSAGGATVFPEV 471
>sp|Q60716|P4HA2_MOUSE Prolyl 4-hydroxylase subunit alpha-2 OS=Mus musculus GN=P4ha2 PE=2
SV=1
Length = 537
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 73/138 (52%), Gaps = 6/138 (4%)
Query: 86 SPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKY 145
SP I+ ++ +S EE + ++ IA+P L +TV D KTG ++ R S +L EE
Sbjct: 337 SPHIVRYYDVMSDEEIERIKEIAKPKLARATVRDPKTGVLTVASYRVSKSSWL--EEDDD 394
Query: 146 PMIQAIEKRISVFSQVPVENGELIQVLRYEKDQYYKPHHDYF----SDTFNLKRGGQRIA 201
P++ + +R+ + + V+ EL+QV Y Y+PH D+ D F G R+A
Sbjct: 395 PVVARVNRRMQHITGLTVKTAELLQVANYGMGGQYEPHFDFSRSDDEDAFKRLGTGNRVA 454
Query: 202 TMLMYLSDNVEGGETYFP 219
T L Y+SD GG T FP
Sbjct: 455 TFLNYMSDVEAGGATVFP 472
>sp|Q1RMU3|P4HA1_BOVIN Prolyl 4-hydroxylase subunit alpha-1 OS=Bos taurus GN=P4HA1 PE=1
SV=1
Length = 534
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 87 PRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKYP 146
PRI+ H+ +S E + ++ +A+P L+ +T+ + TG + R S +LS E P
Sbjct: 335 PRIIRFHDIISDAEIEVVKDLAKPRLRRATISNPITGDLETVHYRISKSAWLSGYEN--P 392
Query: 147 MIQAIEKRISVFSQVPVENGELIQVLRYEKDQYYKPHHDYFS----DTFNLKRGGQRIAT 202
++ I RI + + V E +QV Y Y+PH D+ D F G RIAT
Sbjct: 393 VVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTGNRIAT 452
Query: 203 MLMYLSDNVEGGETYFPMV 221
L Y+SD + GG T FP V
Sbjct: 453 WLFYMSDVLAGGATVFPEV 471
>sp|Q5RAG8|P4HA1_PONAB Prolyl 4-hydroxylase subunit alpha-1 OS=Pongo abelii GN=P4HA1 PE=2
SV=1
Length = 534
Score = 73.9 bits (180), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 69/139 (49%), Gaps = 6/139 (4%)
Query: 87 PRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKYP 146
PRI+ H+ +S E + ++ +A+P L+ +T+ + TG + R S +LS E P
Sbjct: 335 PRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPITGDLETVHYRISKSAWLSGYEN--P 392
Query: 147 MIQAIEKRISVFSQVPVENGELIQVLRYEKDQYYKPHHDYFS----DTFNLKRGGQRIAT 202
++ I RI + + V E +QV Y Y+PH D+ D F G RIAT
Sbjct: 393 VVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTGNRIAT 452
Query: 203 MLMYLSDNVEGGETYFPMV 221
L Y+SD GG T FP V
Sbjct: 453 WLFYMSDVSAGGATVFPEV 471
>sp|P13674|P4HA1_HUMAN Prolyl 4-hydroxylase subunit alpha-1 OS=Homo sapiens GN=P4HA1 PE=1
SV=2
Length = 534
Score = 73.9 bits (180), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 69/139 (49%), Gaps = 6/139 (4%)
Query: 87 PRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKYP 146
PRI+ H+ +S E + ++ +A+P L+ +T+ + TG + R S +LS E P
Sbjct: 335 PRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPITGDLETVHYRISKSAWLSGYEN--P 392
Query: 147 MIQAIEKRISVFSQVPVENGELIQVLRYEKDQYYKPHHDYFS----DTFNLKRGGQRIAT 202
++ I RI + + V E +QV Y Y+PH D+ D F G RIAT
Sbjct: 393 VVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTGNRIAT 452
Query: 203 MLMYLSDNVEGGETYFPMV 221
L Y+SD GG T FP V
Sbjct: 453 WLFYMSDVSAGGATVFPEV 471
>sp|Q60715|P4HA1_MOUSE Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus GN=P4ha1 PE=2
SV=2
Length = 534
Score = 73.9 bits (180), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 69/139 (49%), Gaps = 6/139 (4%)
Query: 87 PRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKYP 146
PRI+ H+ +S E + ++ +A+P L+ +T+ + TG + R S +LS E P
Sbjct: 335 PRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPVTGALETVHYRISKSAWLSGYED--P 392
Query: 147 MIQAIEKRISVFSQVPVENGELIQVLRYEKDQYYKPHHDYFS----DTFNLKRGGQRIAT 202
++ I RI + + V E +QV Y Y+PH D+ D F G RIAT
Sbjct: 393 VVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFRELGTGNRIAT 452
Query: 203 MLMYLSDNVEGGETYFPMV 221
L Y+SD GG T FP V
Sbjct: 453 WLFYMSDVSAGGATVFPEV 471
>sp|Q20065|P4HA2_CAEEL Prolyl 4-hydroxylase subunit alpha-2 OS=Caenorhabditis elegans
GN=phy-2 PE=1 SV=1
Length = 539
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 6/160 (3%)
Query: 68 KEAELLRLGYVKPEVISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIK 127
++ L+L +K E++ + P ++ N + E + ++ +A P L+ +TV ++KTG+
Sbjct: 306 RDKPFLKLAPIKVEILRFDPLAVLFKNVIHDSEIEVIKELASPKLKRATVQNSKTGELEH 365
Query: 128 SNVRTSSGMFLSPEEKKYPMIQAIEKRISVFSQVPVENGELIQVLRYEKDQYYKPHHDYF 187
+ R S +L + P+I + +RI F+ + E +QV Y +Y PH D+
Sbjct: 366 ATYRISKSAWLKGDLD--PVIDRVNRRIEDFTNLNQATSEELQVANYGLGGHYDPHFDFA 423
Query: 188 ----SDTFNLKRGGQRIATMLMYLSDNVEGGETYFPMVMT 223
+ F G RIAT+L Y+S GG T F + T
Sbjct: 424 RKEEKNAFKTLNTGNRIATVLFYMSQPERGGATVFNHLGT 463
>sp|Q10576|P4HA1_CAEEL Prolyl 4-hydroxylase subunit alpha-1 OS=Caenorhabditis elegans
GN=dpy-18 PE=1 SV=2
Length = 559
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 77/145 (53%), Gaps = 6/145 (4%)
Query: 78 VKPEVISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMF 137
+K E+ ++P ++ + +S +E ++ +A+P L +TV D+ TGK + + R S +
Sbjct: 319 IKVEIKRFNPLAVLFKDVISDDEVAAIQELAKPKLARATVHDSVTGKLVTATYRISKSAW 378
Query: 138 LSPEEKKYPMIQAIEKRISVFSQVPVENGELIQVLRYEKDQYYKPHHDYF----SDTFNL 193
L +E + +++ + KRI + + +E E +Q+ Y +Y PH D+ S +F
Sbjct: 379 L--KEWEGDVVETVNKRIGYMTNLEMETAEELQIANYGIGGHYDPHFDHAKKEESKSFES 436
Query: 194 KRGGQRIATMLMYLSDNVEGGETYF 218
G RIAT+L Y+S GG T F
Sbjct: 437 LGTGNRIATVLFYMSQPSHGGGTVF 461
>sp|Q6W3F0|P4HA3_MOUSE Prolyl 4-hydroxylase subunit alpha-3 OS=Mus musculus GN=P4ha3 PE=2
SV=1
Length = 542
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 84/170 (49%), Gaps = 10/170 (5%)
Query: 54 YLQLPRGVTFWDNDKEAELLRLGYVKPEVISWSPRILVLHNFLSMEECDYLRAIARPHLQ 113
+ Q+P ++ + LL L + EV+ P I + H+F+S EE +R +A P LQ
Sbjct: 312 HYQIPSLYCSYETNSSPYLL-LQPARKEVVHLRPLIALYHDFVSDEEAQKIRELAEPWLQ 370
Query: 114 VSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKYPMIQAIEKRISVFSQVPVEN--GELIQV 171
S V + K ++ R S +L ++ PM+ ++ RI+ + + ++ E +QV
Sbjct: 371 RSVVASGE--KQLQVEYRISKSAWL--KDTVDPMLVTLDHRIAALTGLDIQPPYAEYLQV 426
Query: 172 LRYEKDQYYKPHHDYF---SDTFNLKRGGQRIATMLMYLSDNVEGGETYF 218
+ Y +Y+PH D+ S + G R+AT ++YLS GG T F
Sbjct: 427 VNYGIGGHYEPHFDHATSPSSPLYRMKSGNRVATFMIYLSSVEAGGATAF 476
>sp|Q6W3E9|P4HA3_RAT Prolyl 4-hydroxylase subunit alpha-3 OS=Rattus norvegicus GN=P4ha3
PE=2 SV=1
Length = 544
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 85/170 (50%), Gaps = 10/170 (5%)
Query: 54 YLQLPRGVTFWDNDKEAELLRLGYVKPEVISWSPRILVLHNFLSMEECDYLRAIARPHLQ 113
+ Q+P ++ + LL L + EVI P + + H+F+S EE +R +A P LQ
Sbjct: 314 HYQIPSLYCSYETNSSPYLL-LQPARKEVIHLRPLVALYHDFVSDEEAQKIRELAEPWLQ 372
Query: 114 VSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKYPMIQAIEKRISVFSQVPVEN--GELIQV 171
S V + K ++ R S +L ++ P++ +++RI+ + + ++ E +QV
Sbjct: 373 RSVVASGE--KQLQVEYRISKSAWL--KDTVDPVLVTLDRRIAALTGLDIQPPYAEYLQV 428
Query: 172 LRYEKDQYYKPHHDYF---SDTFNLKRGGQRIATMLMYLSDNVEGGETYF 218
+ Y +Y+PH D+ S + G R AT+++YLS GG T F
Sbjct: 429 VNYGIGGHYEPHFDHATSPSSPLYKMKSGNRAATLMIYLSSVEAGGATAF 478
>sp|Q7Z4N8|P4HA3_HUMAN Prolyl 4-hydroxylase subunit alpha-3 OS=Homo sapiens GN=P4HA3 PE=1
SV=1
Length = 544
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 81/168 (48%), Gaps = 10/168 (5%)
Query: 56 QLPRGVTFWDNDKEAELLRLGYVKPEVISWSPRILVLHNFLSMEECDYLRAIARPHLQVS 115
Q+P ++ + A LL L ++ EVI P I + H+F+S E +R +A P LQ S
Sbjct: 316 QIPSLYCSYETNSNAYLL-LQPIRKEVIHLEPYIALYHDFVSDSEAQKIRELAEPWLQRS 374
Query: 116 TVVDTKTGKGIKSNVRTSSGMFLSPEEKKYPMIQAIEKRISVFSQVPVEN--GELIQVLR 173
V + K ++ R S +L ++ P + + RI+ + + V E +QV+
Sbjct: 375 VVASGE--KQLQVEYRISKSAWL--KDTVDPKLVTLNHRIAALTGLDVRPPYAEYLQVVN 430
Query: 174 YEKDQYYKPHHDYF---SDTFNLKRGGQRIATMLMYLSDNVEGGETYF 218
Y +Y+PH D+ S + G R+AT ++YLS GG T F
Sbjct: 431 YGIGGHYEPHFDHATSPSSPLYRMKSGNRVATFMIYLSSVEAGGATAF 478
>sp|Q75UG4|P4HA3_BOVIN Prolyl 4-hydroxylase subunit alpha-3 OS=Bos taurus GN=P4HA3 PE=2
SV=1
Length = 544
Score = 64.3 bits (155), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 78/151 (51%), Gaps = 9/151 (5%)
Query: 73 LRLGYVKPEVISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRT 132
L L V+ EVI P +++ H+F+S E +R +A P LQ S V + K + R
Sbjct: 332 LLLQPVRKEVIHLEPYVVLYHDFVSDAEAQTIRGLAEPWLQRSVVASGE--KQLPVEYRI 389
Query: 133 SSGMFLSPEEKKYPMIQAIEKRISVFSQVPVEN--GELIQVLRYEKDQYYKPHHDYF-SD 189
S +L ++ P++ ++ RI+ + + V+ E +QV+ Y +Y+PH D+ S
Sbjct: 390 SKSAWL--KDTVDPVLVTLDHRIAALTGLDVQPPYAEYLQVVNYGIGGHYEPHFDHATSP 447
Query: 190 TFNLKR--GGQRIATMLMYLSDNVEGGETYF 218
+ L R G R+AT ++YLS GG T F
Sbjct: 448 SSPLYRMNSGNRVATFMIYLSSVEAGGATAF 478
>sp|P30321|DPOL_PBCV1 DNA polymerase OS=Paramecium bursaria Chlorella virus 1 GN=DPO PE=3
SV=2
Length = 913
Score = 31.2 bits (69), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 108 ARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKYPMI-QAIEKRISVFSQVPVENG 166
+PHL V+ + +TG + S R F+ E+KK P I Q+ + F+Q +NG
Sbjct: 783 CQPHLHVANKIYERTGFPVPSGARVP---FVYIEDKKNPDIKQSFKAEDPTFAQ---DNG 836
Query: 167 ELIQVLRYEKDQYYKP 182
++ L Y + Q KP
Sbjct: 837 LIVDRLFYIEHQLLKP 852
>sp|P91349|SPD5_CAEEL Spindle-defective protein 5 OS=Caenorhabditis elegans GN=spd-5 PE=1
SV=2
Length = 1198
Score = 31.2 bits (69), Expect = 6.1, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
Query: 105 RAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKYPMIQAIEKRISVFSQVPVE 164
R++++P L V D +T + + SG F S + + P+IQ E+ ++ +++ +
Sbjct: 22 RSMSQPVLNVEG--DKRTSSTSATQQQVLSGAFSSADVRSIPIIQTWEENKALKTKITIL 79
Query: 165 NGEL-IQVLRYE--KDQYYKPHHDYFSDTFNLKRGGQRI 200
GEL + RY K+ K + D +LK G + +
Sbjct: 80 RGELQMYQRRYSEAKEASQKRVKEVMDDYVDLKLGQENV 118
>sp|B3PLH7|MLTF_CELJU Membrane-bound lytic murein transglycosylase F OS=Cellvibrio
japonicus (strain Ueda107) GN=mltF PE=3 SV=1
Length = 495
Score = 31.2 bits (69), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 21/104 (20%), Positives = 50/104 (48%), Gaps = 9/104 (8%)
Query: 97 SMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSG--MFLSPEEKKYPMIQAIEKR 154
++E DY + A+P++Q++ + G ++++ G + + + + ++K+
Sbjct: 115 ALESQDYHLSFAKPYMQITQQLVYNHRLGTPTSIKDLKGKEVLILADSAHSKRVARLQKK 174
Query: 155 ISVFSQVPVENGELIQVLRYEKDQYYKPHHDYF---SDTFNLKR 195
+ P+ENG++I +L + +K DY S+ + L R
Sbjct: 175 FPNLTWRPIENGQMIDLL----EMVHKGEADYAVIDSNAYELHR 214
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.139 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,945,631
Number of Sequences: 539616
Number of extensions: 3558920
Number of successful extensions: 7641
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 7594
Number of HSP's gapped (non-prelim): 20
length of query: 224
length of database: 191,569,459
effective HSP length: 113
effective length of query: 111
effective length of database: 130,592,851
effective search space: 14495806461
effective search space used: 14495806461
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)