Query 027393
Match_columns 224
No_of_seqs 225 out of 1155
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 15:22:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027393.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027393hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jig_A Prolyl-4 hydroxylase; h 100.0 4.5E-37 1.5E-41 258.6 15.6 147 74-222 7-155 (224)
2 3itq_A Prolyl 4-hydroxylase, a 100.0 2.7E-35 9.3E-40 246.9 11.1 137 78-223 30-166 (216)
3 3dkq_A PKHD-type hydroxylase S 99.8 4.9E-21 1.7E-25 162.8 7.1 131 81-221 13-154 (243)
4 2hbt_A EGL nine homolog 1; pro 99.6 3.2E-15 1.1E-19 127.3 12.1 124 87-219 26-167 (247)
5 3kt7_A PKHD-type hydroxylase T 97.4 0.00025 8.4E-09 66.7 7.0 60 152-220 107-174 (633)
6 2rg4_A Uncharacterized protein 96.0 0.014 4.8E-07 48.0 6.8 42 168-220 104-145 (216)
7 2iuw_A Alkylated repair protei 95.1 0.27 9.2E-06 40.8 11.5 93 87-187 40-147 (238)
8 2fct_A Syringomycin biosynthes 93.7 0.33 1.1E-05 41.2 9.2 129 82-218 17-163 (313)
9 3s57_A Alpha-ketoglutarate-dep 92.9 0.91 3.1E-05 36.7 10.2 98 83-188 6-122 (204)
10 2rdq_A 1-deoxypentalenic acid 92.8 0.11 3.8E-06 43.6 4.8 30 81-111 26-55 (288)
11 3tht_A Alkylated DNA repair pr 92.0 0.83 2.8E-05 40.0 9.5 98 83-188 107-219 (345)
12 3emr_A ECTD; double stranded b 91.9 0.056 1.9E-06 46.6 1.8 126 80-218 40-182 (310)
13 2a1x_A Phytanoyl-COA dioxygena 91.1 0.58 2E-05 39.6 7.4 30 80-110 28-57 (308)
14 3gja_A CYTC3; halogenase, beta 86.5 2.4 8.3E-05 36.3 8.1 29 82-111 19-47 (319)
15 3i3q_A Alpha-ketoglutarate-dep 77.1 12 0.00041 30.2 8.5 40 147-186 85-124 (211)
16 1q90_G Cytochrome B6F complex 48.6 17 0.00059 21.0 2.8 25 5-29 5-29 (37)
17 3nnf_A CURA; non-HAEM Fe(II)/a 46.7 37 0.0013 29.4 5.9 129 86-219 40-176 (344)
18 1otj_A Alpha-ketoglutarate-dep 46.4 1.1E+02 0.0039 24.8 9.0 33 181-219 97-129 (283)
19 3r1j_A Alpha-ketoglutarate-dep 46.0 66 0.0023 27.0 7.6 36 178-219 98-133 (301)
20 2opw_A Phyhd1 protein; double- 45.2 26 0.00089 28.8 4.8 39 177-218 150-189 (291)
21 2lx0_A Membrane fusion protein 44.7 23 0.00078 19.2 2.8 20 9-28 11-30 (32)
22 1vf5_G Protein PET G; photosyn 38.5 22 0.00075 20.6 2.2 26 4-29 4-29 (37)
23 3pvj_A Alpha-ketoglutarate-dep 27.9 41 0.0014 27.8 3.3 36 178-219 92-127 (277)
24 1oih_A Putative alkylsulfatase 24.7 58 0.002 27.0 3.6 37 177-219 102-138 (301)
25 1o51_A Hypothetical protein TM 22.7 1.2E+02 0.0042 21.7 4.6 73 102-174 33-113 (114)
26 2opw_A Phyhd1 protein; double- 20.7 66 0.0023 26.2 3.2 25 85-110 14-38 (291)
27 3m05_A Uncharacterized protein 20.3 17 0.00058 26.5 -0.6 12 207-218 93-104 (114)
No 1
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=100.00 E-value=4.5e-37 Score=258.64 Aligned_cols=147 Identities=46% Similarity=0.760 Sum_probs=132.6
Q ss_pred eecCcceEEeecCCcEEEEcCCCCHHHHHHHHHHhcCCCccceeeeCCCCCcccccccccceeeeCCCCcchHHHHHHHH
Q 027393 74 RLGYVKPEVISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKYPMIQAIEK 153 (224)
Q Consensus 74 rlaplK~E~Ls~~P~I~~~~dfLs~~Ec~~Li~~a~~~l~~s~v~~~~~g~~~~s~~R~S~~~~l~~~~~~~~v~~~i~~ 153 (224)
.++|.|+|+||++|+|++||||||++||++|++++++.++++++.++.+|....+++|+|+++|+...+ ++++++|++
T Consensus 7 ~~~~~k~e~ls~~P~i~~~~~fLs~~Ec~~li~~~~~~~~~s~v~~~~~g~~~~~~~R~s~~~~l~~~~--~~~~~~i~~ 84 (224)
T 2jig_A 7 EEWRGEVVHLSWSPRAFLLKNFLSDEECDYIVEKARPKMVKSSVVDNESGKSVDSEIRTSTGTWFAKGE--DSVISKIEK 84 (224)
T ss_dssp CCCCCCEEEEETTTTEEEETTCSCHHHHHHHHHHHGGGCEECEEEETTTTEEEECSSBCSEEEECCTTC--SHHHHHHHH
T ss_pred cccCcceEEEeCCCCEEEEcccCCHHHHHHHHHHhhccCeeeeeecCCCCcccccCCEEEeeeEecCCC--CHHHHHHHH
Confidence 478999999999999999999999999999999999999999998877677778899999999998753 689999999
Q ss_pred HHHHhcCCCccccceeeeEEcCCCCCccccccCCCCcccC--CCCCceEEEEEEeccCCCCCceeecCCCC
Q 027393 154 RISVFSQVPVENGELIQVLRYEKDQYYKPHHDYFSDTFNL--KRGGQRIATMLMYLSDNVEGGETYFPMVM 222 (224)
Q Consensus 154 Ri~~~~gl~~~~~E~lqv~rY~~Gg~y~~H~D~~~~~~~~--~~~~~R~~T~l~YLNDv~~GGeT~Fp~l~ 222 (224)
||.+++|+|...+|.+||+||++||+|++|+|++....+. ..+++|++|+++||||+++||||+||.++
T Consensus 85 ri~~~~gl~~~~~e~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~ 155 (224)
T 2jig_A 85 RVAQVTMIPLENHEGLQVLHYHDGQKYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNAE 155 (224)
T ss_dssp HHHHHHTCCGGGBCCCEEEEEETTCCEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETTSS
T ss_pred HHHHHhCCCcccccceEEEecCCCccccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCCcc
Confidence 9999999999999999999999999999999998653221 24579999999999999999999999873
No 2
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=100.00 E-value=2.7e-35 Score=246.91 Aligned_cols=137 Identities=42% Similarity=0.619 Sum_probs=117.3
Q ss_pred cceEEeecCCcEEEEcCCCCHHHHHHHHHHhcCCCccceeeeCCCCCcccccccccceeeeCCCCcchHHHHHHHHHHHH
Q 027393 78 VKPEVISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKYPMIQAIEKRISV 157 (224)
Q Consensus 78 lK~E~Ls~~P~I~~~~dfLs~~Ec~~Li~~a~~~l~~s~v~~~~~g~~~~s~~R~S~~~~l~~~~~~~~v~~~i~~Ri~~ 157 (224)
++++++|++|+|++||||||++||++|++++++++++|++... ...+++|+|+++|++. ++++++|++||++
T Consensus 30 v~v~~l~~~P~i~~~~~fLs~~Ec~~Li~~a~~~l~~s~v~~~----~~~~~~RtS~~~wl~~----~~~v~~i~~Ri~~ 101 (216)
T 3itq_A 30 IQIISKFEEPLIVVLGNVLSDEECDELIELSKSKLARSKVGSS----RDVNDIRTSSGAFLDD----NELTAKIEKRISS 101 (216)
T ss_dssp EEEEEEETTTTEEEEESCSCHHHHHHHHHHHHHHHC------------CCCCGGGTTCEECCC----CHHHHHHHHHHHH
T ss_pred EEEEEeeCCCCEEEECCcCCHHHHHHHHHHhhcccccceeccC----CccCCcEeeeeEEeCC----cHHHHHHHHHHHH
Confidence 4689999999999999999999999999999998988887221 3467899999999986 5899999999999
Q ss_pred hcCCCccccceeeeEEcCCCCCccccccCCCCcccCCCCCceEEEEEEeccCCCCCceeecCCCCC
Q 027393 158 FSQVPVENGELIQVLRYEKDQYYKPHHDYFSDTFNLKRGGQRIATMLMYLSDNVEGGETYFPMVMT 223 (224)
Q Consensus 158 ~~gl~~~~~E~lqv~rY~~Gg~y~~H~D~~~~~~~~~~~~~R~~T~l~YLNDv~~GGeT~Fp~l~~ 223 (224)
++|+|.+.+|.+|++||++||+|++|+|++..... ...++|++|+++||||+++||||+||.+++
T Consensus 102 ~~gl~~~~~E~lqv~~Y~~G~~y~~H~D~~~~~~~-~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~ 166 (216)
T 3itq_A 102 IMNVPASHGEGLHILNYEVDQQYKAHYDYFAEHSR-SAANNRISTLVMYLNDVEEGGETFFPKLNL 166 (216)
T ss_dssp HHTSCGGGBCCCEEEEECBTCCEEEECSSCCTTSG-GGGGCEEEEEEEECSCCSEECCEEETTTTE
T ss_pred hcCceeccccceeEEEeCCCCccccccCCCcCCCc-ccCCceEEEEEEecccCCcCceeEecCCCC
Confidence 99999999999999999999999999999865321 125899999999999999999999998764
No 3
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=99.83 E-value=4.9e-21 Score=162.79 Aligned_cols=131 Identities=16% Similarity=0.111 Sum_probs=97.2
Q ss_pred EEeecCCcEEEEcCCCCHHHHHHHHHHhcCC-CccceeeeCCCCCcccccccccceeeeCCCCcchHHHHHHHHHHHHhc
Q 027393 81 EVISWSPRILVLHNFLSMEECDYLRAIARPH-LQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKYPMIQAIEKRISVFS 159 (224)
Q Consensus 81 E~Ls~~P~I~~~~dfLs~~Ec~~Li~~a~~~-l~~s~v~~~~~g~~~~s~~R~S~~~~l~~~~~~~~v~~~i~~Ri~~~~ 159 (224)
|.|-.++.|++++||||++||++|+++++.. +.++.+ ++....+.+|++ .|+..+ ++++++|.+||.+++
T Consensus 13 ~~~~~~~~i~~i~dvLs~~Ec~~li~~~e~~~~~dg~~----t~g~~~~~vr~n--~~l~~d---~~~~~~l~~~i~~~l 83 (243)
T 3dkq_A 13 ENLYFQGMLIEIPNVFSKQEVSHLREQLDARRWIDGNQ----TSGAMATTRKRN--QQLDKD---DPVAVALGQQIMDRL 83 (243)
T ss_dssp -CCCCBTTBEEECCSSCHHHHHHHHHHHHTSCCEEECC----CSSBSSCCCEEE--EECCTT---CHHHHHHHHHHHHHH
T ss_pred cccccCCCEEEECCCCCHHHHHHHHHHHhhCCCccCcc----cCCCccccceee--eEECCC---CHHHHHHHHHHHHHH
Confidence 4566788999999999999999999999752 322221 111233456665 455533 589999999999987
Q ss_pred CCC--------ccccceeeeEEcCCCCCccccccCCCCcccCCCCCceEEEEEEeccC--CCCCceeecCCC
Q 027393 160 QVP--------VENGELIQVLRYEKDQYYKPHHDYFSDTFNLKRGGQRIATMLMYLSD--NVEGGETYFPMV 221 (224)
Q Consensus 160 gl~--------~~~~E~lqv~rY~~Gg~y~~H~D~~~~~~~~~~~~~R~~T~l~YLND--v~~GGeT~Fp~l 221 (224)
+.. ....|++|++||++|++|++|+|.+...... ...+|.+|+++|||| +++||||+||..
T Consensus 84 ~~~~~f~~~~L~~~~e~~~~~rY~~G~~y~~H~D~~~~~~~~-~~~~r~~T~~lYLndp~~~~GGetvf~~~ 154 (243)
T 3dkq_A 84 LAHPQFVSAALPLQFYPPLFNRYQGGETFGYHIDNAIRSTPD-GMIRTDLSATLFLSEPENYQGGELVIQDT 154 (243)
T ss_dssp HTCHHHHHHHCEEEEEEEEEEEECTTCEEEEECBCSEEEETT-EEEECCEEEEEECSCGGGEEECCEEEEET
T ss_pred ccCcchhhcccccccccceEEEECCCCeeccCCCCCCCCCCC-ccccceEEEEEEeCCCCCCCCceEEEeeC
Confidence 654 1346789999999999999999998653210 023689999999999 779999999964
No 4
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=99.62 E-value=3.2e-15 Score=127.32 Aligned_cols=124 Identities=19% Similarity=0.242 Sum_probs=86.7
Q ss_pred CcEEEEcCCCCHHHHHHHHHHhcC-----CCccceeeeCCCCCcccccccccceeeeCCCCcchH----HHHHHHHHHHH
Q 027393 87 PRILVLHNFLSMEECDYLRAIARP-----HLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKYP----MIQAIEKRISV 157 (224)
Q Consensus 87 P~I~~~~dfLs~~Ec~~Li~~a~~-----~l~~s~v~~~~~g~~~~s~~R~S~~~~l~~~~~~~~----v~~~i~~Ri~~ 157 (224)
+.+++++|||+++||+.|++.++. .+.++.+... .....+++|++..+|++..+...+ +.+++.+.+..
T Consensus 26 ~g~~Vid~fLs~ee~~~L~~~~~~~~~~g~~~~a~i~~~--~~~~~~~iR~d~i~wl~~~~~~~~~~~~l~~~i~~l~~~ 103 (247)
T 2hbt_A 26 HGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQ--KSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRH 103 (247)
T ss_dssp TSEEEESSSSCHHHHHHHHHHHHHHHHTTCSCSCCEEEC--CSSSTTCEECCEEEEECSCSTTCHHHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCCHHHHHHHHHHHHhhhhcCCccccccccc--cccccccccccceeeecccccchhHHHHHHHHHHHHHHH
Confidence 456889999999999999998864 3566666542 123567899999999987542112 33344333332
Q ss_pred hc---CCCc-cccceeeeEEcCC-CCCccccccCCCCcccCCCCCceEEEEEEeccCC----CCCceeecC
Q 027393 158 FS---QVPV-ENGELIQVLRYEK-DQYYKPHHDYFSDTFNLKRGGQRIATMLMYLSDN----VEGGETYFP 219 (224)
Q Consensus 158 ~~---gl~~-~~~E~lqv~rY~~-Gg~y~~H~D~~~~~~~~~~~~~R~~T~l~YLNDv----~~GGeT~Fp 219 (224)
+. |+.. ...+..|+.+|.+ |++|++|.|.. . ..+|.+|+++|||+. +.||+|.|.
T Consensus 104 ln~~lGl~~i~~~~e~~~~~Y~~~G~~y~~H~D~~-~------~~~R~~T~vlYLN~~w~~~~~GG~l~~~ 167 (247)
T 2hbt_A 104 CNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNP-N------GDGRCVTCIYYLNKDWDAKVSGGILRIF 167 (247)
T ss_dssp TTTTSTTCCEEEECCEEEEEECSSSCCEEEECSSC-S------CCSEEEEEEEECBTTCCHHHHBCCEEEC
T ss_pred HhhhcCcccccccceEEEEEecCCCCcccccccCC-C------CCCceEEEEEEeCCCCCCCCCceeEEEe
Confidence 22 2211 1135699999996 99999999983 1 357999999999985 469999753
No 5
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=97.41 E-value=0.00025 Score=66.72 Aligned_cols=60 Identities=18% Similarity=0.278 Sum_probs=46.0
Q ss_pred HHHHHHhcCC-Ccc-ccceeeeEEcCCCCCccccccCCCCcccCCCCCceEEEEEEeccCC------CCCceeecCC
Q 027393 152 EKRISVFSQV-PVE-NGELIQVLRYEKDQYYKPHHDYFSDTFNLKRGGQRIATMLMYLSDN------VEGGETYFPM 220 (224)
Q Consensus 152 ~~Ri~~~~gl-~~~-~~E~lqv~rY~~Gg~y~~H~D~~~~~~~~~~~~~R~~T~l~YLNDv------~~GGeT~Fp~ 220 (224)
..-+++++|+ ++. ..-.+++.+|.+|++|.+|.|.+ +.|.+|+++|||+. +.||+..+..
T Consensus 107 r~~Ls~iTGi~~Lsg~~~D~~~a~Y~~G~fL~~H~D~~---------~~RrvS~VLYLN~pd~~W~~e~GGeL~Lyd 174 (633)
T 3kt7_A 107 RDFFGYVTKAGKLSGSKTDMSINTYTKGCHLLTHDDVI---------GSRRISFILYLPDPDRKWKSHYGGGLRLFP 174 (633)
T ss_dssp HHHHHHHHTCCCCCSSCCCEEEEEECTTCEEEEECCCC---------TTEEEEEEEECSCTTSCCCGGGBCCEEECC
T ss_pred HHHHHHHhCCcccCCCceeEEEEEeCCCCeeeecCCCC---------CCeEEEEEEEcCCCCCCCCccCCceEEEec
Confidence 3445667887 443 23458999999999999999953 35999999999983 3699997654
No 6
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=96.04 E-value=0.014 Score=47.97 Aligned_cols=42 Identities=7% Similarity=-0.078 Sum_probs=36.1
Q ss_pred eeeeEEcCCCCCccccccCCCCcccCCCCCceEEEEEEeccCCCCCceeecCC
Q 027393 168 LIQVLRYEKDQYYKPHHDYFSDTFNLKRGGQRIATMLMYLSDNVEGGETYFPM 220 (224)
Q Consensus 168 ~lqv~rY~~Gg~y~~H~D~~~~~~~~~~~~~R~~T~l~YLNDv~~GGeT~Fp~ 220 (224)
..-+..|.+|+++++|.+. ++.+|.++|||..+.||++.|.+
T Consensus 104 ~~W~~~~~~G~~~~~H~H~-----------~~~lSgV~Yl~~p~~~G~L~f~~ 145 (216)
T 2rg4_A 104 DIWINILPEGGVHGSHIHP-----------HSVISGTTYVAMPEGTSALKLED 145 (216)
T ss_dssp EEEEEEECTTCCEEEECCT-----------TCSEEEEEEEECCSCSCCEEEEC
T ss_pred eEEEEEcCCCCcccCccCC-----------CCeEEEEEEEECCCCCccEEEeC
Confidence 4567889999999999872 57899999999888999999954
No 7
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=95.12 E-value=0.27 Score=40.80 Aligned_cols=93 Identities=13% Similarity=0.173 Sum_probs=56.9
Q ss_pred CcEEEEcCCCCHHHHHHHHHHhcC--CCccceeeeCCCCCcccccccccceeeeCC-----------CC-cchHHHHHHH
Q 027393 87 PRILVLHNFLSMEECDYLRAIARP--HLQVSTVVDTKTGKGIKSNVRTSSGMFLSP-----------EE-KKYPMIQAIE 152 (224)
Q Consensus 87 P~I~~~~dfLs~~Ec~~Li~~a~~--~l~~s~v~~~~~g~~~~s~~R~S~~~~l~~-----------~~-~~~~v~~~i~ 152 (224)
|.+.+++|||+++|.+.|++.... .+...... ..|+.+.. .|. .+|+.. .. ...+.+..|.
T Consensus 40 ~gl~~~~~fl~~~e~~~Ll~~l~~~~~w~~~~~~--~~g~~~~~-~R~--~~~~g~~~Y~Ys~~~~~~~p~wp~~l~~l~ 114 (238)
T 2iuw_A 40 SRVCLYPGFVDVKEADWILEQLCQDVPWKQRTGI--REDITYQQ-PRL--TAWYGELPYTYSRITMEPNPHWHPVLRTLK 114 (238)
T ss_dssp EEEEEETTSSCHHHHHHHHHHHHHHSCCBCCEEE--SSSCEEEC-SSE--EEEEECCCTTSCHHHHCCBSSCCHHHHHHH
T ss_pred CcEEEECCCCCHHHHHHHHHHHHHhCCCccCcee--cCCccccc-CCe--eEEcCCCccccCCcccCCCCCCCHHHHHHH
Confidence 358999999999999999887632 22222111 11222211 121 123321 00 1235677788
Q ss_pred HHHHHhcCCCccccceeeeEEcCCCC-CccccccCC
Q 027393 153 KRISVFSQVPVENGELIQVLRYEKDQ-YYKPHHDYF 187 (224)
Q Consensus 153 ~Ri~~~~gl~~~~~E~lqv~rY~~Gg-~y~~H~D~~ 187 (224)
+++++..|.+ .+..-+..|.+|+ .=.+|.|..
T Consensus 115 ~~~~~~~g~~---~n~~LvN~Y~~G~d~i~~H~D~~ 147 (238)
T 2iuw_A 115 NRIEENTGHT---FNSLLCNLYRNEKDSVDWHSDDE 147 (238)
T ss_dssp HHHHHHHSCC---CCEEEEEEECSTTCCEEEECCCC
T ss_pred HHHHHHhCCC---CCEEEEEEECCCCCceeCCcCCh
Confidence 8888877643 3557788899997 999999974
No 8
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=93.66 E-value=0.33 Score=41.17 Aligned_cols=129 Identities=13% Similarity=-0.006 Sum_probs=60.7
Q ss_pred EeecCCcEEEEcCCCCHHHHHHHHHHhcCCCccc--eeeeCCCCCccc-ccccccceeeeCCCCcchHHH------HHHH
Q 027393 82 VISWSPRILVLHNFLSMEECDYLRAIARPHLQVS--TVVDTKTGKGIK-SNVRTSSGMFLSPEEKKYPMI------QAIE 152 (224)
Q Consensus 82 ~Ls~~P~I~~~~dfLs~~Ec~~Li~~a~~~l~~s--~v~~~~~g~~~~-s~~R~S~~~~l~~~~~~~~v~------~~i~ 152 (224)
.+..+-+ +++.++|+++||+.+.+.....+... .+... +.... ...|.....+.. .+.+ .+|.
T Consensus 17 ~f~~dGy-vvl~~~l~~e~v~~l~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~p~l~ 88 (313)
T 2fct_A 17 SFEKNGF-IGPFDAYSPEEMKETWKRTRLRLLDRSAAAYQD--LDAISGGTNIANYDRHLD-----DDFLASHICRPEIC 88 (313)
T ss_dssp HHHHHSE-EEEEESSCHHHHHHHHHHHHHHHTCCTTCSCCC--CCC----CGGGGBCGGGT-----CHHHHHHTTCHHHH
T ss_pred HHHhCCE-EECCCCCCHHHHHHHHHHHHHHHhccccccccc--ccccCCccchhccccccc-----cHHHHHHHcChHHH
Confidence 3444555 58999999999999987654322111 11111 00000 001211111111 1221 2344
Q ss_pred HHHHHhcCCCccccceeeeEEcCCCCCccccccCCCCccc------CCCCCc--eEEEEEEeccCCC-CCceeec
Q 027393 153 KRISVFSQVPVENGELIQVLRYEKDQYYKPHHDYFSDTFN------LKRGGQ--RIATMLMYLSDNV-EGGETYF 218 (224)
Q Consensus 153 ~Ri~~~~gl~~~~~E~lqv~rY~~Gg~y~~H~D~~~~~~~------~~~~~~--R~~T~l~YLNDv~-~GGeT~F 218 (224)
+.++.+.|-+.......-+.+...++...||.|...-..+ .+.... +.+|+.++|.|+. +.|.|.|
T Consensus 89 ~~~~~llG~~~~~~~~~~~~k~Pg~~~~~wHqD~~~~~~~g~p~~~~p~~~~~~~~l~~wiaL~D~~~enG~l~~ 163 (313)
T 2fct_A 89 DRVESILGPNVLCWRTEFFPKYPGDEGTDWHQADTFANASGKPQIIWPENEEFGGTITVWTAFTDANIANGCLQF 163 (313)
T ss_dssp HHHHHHHCSCEEEEEEEEEEECTTCCEECCBCCSSSCTTTSSCSEECCTTSCCCSCEEEEEESSCBCTTBTCEEE
T ss_pred HHHHHHcCCCeEeeeeeEEEeCCCCCCCCccccccccccCCCccccccccccccCeEEEEEEeccCCccCCCEEE
Confidence 4455566633222111123333323446899998532110 000111 6799999999974 5666654
No 9
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=92.95 E-value=0.91 Score=36.67 Aligned_cols=98 Identities=14% Similarity=0.074 Sum_probs=60.0
Q ss_pred eecCCcEEEEcCCCCHHHHHHHHHHhcC--CC---ccceeeeCCCCCcccccccccceeeeCCC-------------Ccc
Q 027393 83 ISWSPRILVLHNFLSMEECDYLRAIARP--HL---QVSTVVDTKTGKGIKSNVRTSSGMFLSPE-------------EKK 144 (224)
Q Consensus 83 Ls~~P~I~~~~dfLs~~Ec~~Li~~a~~--~l---~~s~v~~~~~g~~~~s~~R~S~~~~l~~~-------------~~~ 144 (224)
+-.+-..+.|.+||+++|.++|.+.... .+ +...+.- .|+.+.. -|. .+|..+. ...
T Consensus 6 ~~~~~~~~~~~~~l~~~~a~~l~~~l~~~~~w~~~~~~~~~~--~gk~~~~-pR~--~~wyg~~~~~Y~Ysg~~~~~~pw 80 (204)
T 3s57_A 6 IRAEGLDSSYTVLFGKAEADEIFQELEKEVEYFTGALARVQV--FGKWHSV-PRK--QATYGDAGLTYTFSGLTLSPKPW 80 (204)
T ss_dssp EEETTEEEEEEECSCHHHHHHHHHHHHHHCCCCCGGGGEEEE--TTEEEEC-SSE--EEEEECTTCCEEETTEEECCEEC
T ss_pred eeeCCceEEecCcCCHHHHHHHHHHHHHhCCCCCcccceEEE--CCeEecc-CcE--EEEECCCCCCcccCCCcccCCCC
Confidence 3445556889999999999988876532 22 1112211 1222211 111 1233221 112
Q ss_pred hHHHHHHHHHHHHhcCCCccccceeeeEEcCCCC-CccccccCCC
Q 027393 145 YPMIQAIEKRISVFSQVPVENGELIQVLRYEKDQ-YYKPHHDYFS 188 (224)
Q Consensus 145 ~~v~~~i~~Ri~~~~gl~~~~~E~lqv~rY~~Gg-~y~~H~D~~~ 188 (224)
.+.+..|.++++..+|.+ .+..-+..|.+|+ .-.+|.|...
T Consensus 81 p~~L~~l~~~~~~~~g~~---~n~~LvN~Y~~G~d~i~~H~D~~~ 122 (204)
T 3s57_A 81 IPVLERIRDHVSGVTGQT---FNFVLINRYKDGSDHICEHRDDER 122 (204)
T ss_dssp CHHHHHHHHHHHHHHCCC---CSEEEEEEESSTTCCEEEECCCCT
T ss_pred CHHHHHHHHHHHHHhCCC---CceeEEEEECCCCCcccceecChh
Confidence 478888999998887753 3446788899998 8999999753
No 10
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=92.85 E-value=0.11 Score=43.59 Aligned_cols=30 Identities=17% Similarity=0.082 Sum_probs=23.0
Q ss_pred EEeecCCcEEEEcCCCCHHHHHHHHHHhcCC
Q 027393 81 EVISWSPRILVLHNFLSMEECDYLRAIARPH 111 (224)
Q Consensus 81 E~Ls~~P~I~~~~dfLs~~Ec~~Li~~a~~~ 111 (224)
+.+..+-+ ++++++|+++||+.|.+..+..
T Consensus 26 ~~f~~dGy-vvl~~~l~~e~v~~l~~~~~~~ 55 (288)
T 2rdq_A 26 SFYEEHGY-LFLRNVLDRDLVKTVAEQMREG 55 (288)
T ss_dssp HHHHHHSE-EEECSCSCHHHHHHHHHHHHHH
T ss_pred HHHHhCCE-EEEeCCCCHHHHHHHHHHHHHH
Confidence 33444555 5889999999999999887643
No 11
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=92.03 E-value=0.83 Score=40.04 Aligned_cols=98 Identities=12% Similarity=0.061 Sum_probs=51.7
Q ss_pred eecCCcEEEEcCCCCHHHHHHHHHHhcCCCccceeeeCCCCCccccc---------ccccc------eeeeCCCCcchHH
Q 027393 83 ISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSN---------VRTSS------GMFLSPEEKKYPM 147 (224)
Q Consensus 83 Ls~~P~I~~~~dfLs~~Ec~~Li~~a~~~l~~s~v~~~~~g~~~~s~---------~R~S~------~~~l~~~~~~~~v 147 (224)
.+.-|-+.+++||||++|.+.|++.....-....+. |+...+. ++-+. ..|-. ..-+.
T Consensus 107 ~~lp~Gl~~~p~fis~~Ee~~Ll~~i~w~~~~~~~~----~~~~l~~Rr~~~yG~~Y~Ys~~~~~~~~p~p~---~~P~~ 179 (345)
T 3tht_A 107 QALPPGLMVVEEIISSEEEKMLLESVDWTEDTDNQN----SQKSLKHRRVKHFGYEFHYENNNVDKDKPLSG---GLPDI 179 (345)
T ss_dssp CSCCTTEEEETTCSCHHHHHHHHTTCC--------------------CEEECCC---------------------CCCHH
T ss_pred ccCCCceEEEcCcCCHHHHHHHHHhcccCCcccccc----CcccccCceEEEECCcccccccccccCCCCCc---CcCHH
Confidence 345567999999999999999987654321111111 1111111 11110 01100 01244
Q ss_pred HHHHHHHHHHhcCCCccccceeeeEEcCCCCCccccccCCC
Q 027393 148 IQAIEKRISVFSQVPVENGELIQVLRYEKDQYYKPHHDYFS 188 (224)
Q Consensus 148 ~~~i~~Ri~~~~gl~~~~~E~lqv~rY~~Gg~y~~H~D~~~ 188 (224)
+..|.+|+... ++.-......-|..|.+|+.-.||.|...
T Consensus 180 L~~l~~r~~~~-~~~~~~~n~~lvN~Y~~G~~I~~H~D~~~ 219 (345)
T 3tht_A 180 CESFLEKWLRK-GYIKHKPDQMTINQYEPGQGIPAHIDTHS 219 (345)
T ss_dssp HHHHHHHHHHH-TSCSSCCSEEEEEEECTTCCEEEECCCTT
T ss_pred HHHHHHHHHhc-ccCCCCCCEEEEEEecCCCCEeeccCCch
Confidence 56777777542 32223345677888999999999999854
No 12
>3emr_A ECTD; double stranded beta helix, oxidoreductase; HET: MSE; 1.85A {Virgibacillus salexigens}
Probab=91.94 E-value=0.056 Score=46.60 Aligned_cols=126 Identities=15% Similarity=0.109 Sum_probs=62.8
Q ss_pred eEEeecCCcEEEEcCCCCHHHHHHHHHHhcCCCccce-------eeeCCCCCcccccccccceeeeCCCCcchHHHHH--
Q 027393 80 PEVISWSPRILVLHNFLSMEECDYLRAIARPHLQVST-------VVDTKTGKGIKSNVRTSSGMFLSPEEKKYPMIQA-- 150 (224)
Q Consensus 80 ~E~Ls~~P~I~~~~dfLs~~Ec~~Li~~a~~~l~~s~-------v~~~~~g~~~~s~~R~S~~~~l~~~~~~~~v~~~-- 150 (224)
++.+..+-| ++++|+|+++||+.|.+..+..+.... +... .| ..+|.-...|. .+++...
T Consensus 40 i~~f~~dGy-vvi~~~ls~eev~~lr~~i~~~~~~~~~~~~~~~~~~~-~~----~~~r~~~~~~~-----~~~~f~~l~ 108 (310)
T 3emr_A 40 LDSYEKNGF-LQIKNFFSEDEVIDMQKAIFELQDSIKDVASDKVIREP-ES----NDIRSIFHVHQ-----DDNYFQDVA 108 (310)
T ss_dssp HHHHHHHSE-EEETTCSCHHHHHHHHHHHHHHHHHTTTCCCTTEEECT-TT----CCEEEEECHHH-----HCHHHHHHH
T ss_pred HHHHHhCCE-EEccCCCCHHHHHHHHHHHHHHHhcccccCCccceecC-CC----cceeEEeehhh-----ccHHHHHHH
Confidence 344555666 589999999999999988764322111 1100 00 11121111111 1233322
Q ss_pred ----HHHHHHHhcCCCccccceeeeEEcC---CCCCccccccCCCCcccCCCCCceEEEEEEeccCCC-CCceeec
Q 027393 151 ----IEKRISVFSQVPVENGELIQVLRYE---KDQYYKPHHDYFSDTFNLKRGGQRIATMLMYLSDNV-EGGETYF 218 (224)
Q Consensus 151 ----i~~Ri~~~~gl~~~~~E~lqv~rY~---~Gg~y~~H~D~~~~~~~~~~~~~R~~T~l~YLNDv~-~GGeT~F 218 (224)
|..-++.+.|-+....-. .+.+. .|+...||.|...-.........+.+|+.++|.|+. +.|.|.|
T Consensus 109 ~~p~l~~i~~~llG~~~~l~~s--~~~~k~p~~g~~~~wHqD~~~~~~~~g~P~~~~v~~wiaL~D~t~enG~l~v 182 (310)
T 3emr_A 109 NDKRILDIVRHLLGSDVYVHQS--RINYKPGFKGKEFDWHSDFETWHVEDGMPRMRAISVSIALSDNYSFNGPLML 182 (310)
T ss_dssp TCHHHHHHHHHHHTSCEEEEEE--EEECCCTTCCCCEEEECHHHHHHHHHCCCSSCEEEEEEESSCBCSSSCCCEE
T ss_pred hChHHHHHHHHHcCCceEEEee--EEEEcCCCCCCCCCcCCCCccccccCCCcccceEEEEEEecCCCCcCCCEEE
Confidence 233334455633211110 12233 356788999963211000011257899999999984 5566654
No 13
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=91.10 E-value=0.58 Score=39.58 Aligned_cols=30 Identities=13% Similarity=0.107 Sum_probs=23.2
Q ss_pred eEEeecCCcEEEEcCCCCHHHHHHHHHHhcC
Q 027393 80 PEVISWSPRILVLHNFLSMEECDYLRAIARP 110 (224)
Q Consensus 80 ~E~Ls~~P~I~~~~dfLs~~Ec~~Li~~a~~ 110 (224)
.+.+..+-+ ++++++|+++||+.|.+..+.
T Consensus 28 ~~~f~~dGy-vvl~~~l~~e~v~~l~~~~~~ 57 (308)
T 2a1x_A 28 RKFYEENGF-LVIKNLVPDADIQRFRNEFEK 57 (308)
T ss_dssp HHHHHHHSE-EEETTCSCHHHHHHHHHHHHH
T ss_pred HHHHHhCCE-EEccCCCCHHHHHHHHHHHHH
Confidence 344555665 589999999999999887754
No 14
>3gja_A CYTC3; halogenase, beta barrel, biosynthetic protein; 2.20A {Streptomyces} PDB: 3gjb_A*
Probab=86.50 E-value=2.4 Score=36.29 Aligned_cols=29 Identities=14% Similarity=0.004 Sum_probs=22.0
Q ss_pred EeecCCcEEEEcCCCCHHHHHHHHHHhcCC
Q 027393 82 VISWSPRILVLHNFLSMEECDYLRAIARPH 111 (224)
Q Consensus 82 ~Ls~~P~I~~~~dfLs~~Ec~~Li~~a~~~ 111 (224)
.+..+-| ++++++|+++|++.+.+..+..
T Consensus 19 ~f~~~Gy-v~i~~~l~~~~v~~l~~~i~~~ 47 (319)
T 3gja_A 19 RFERDGY-IGPVKIFEPEEMTRRWNIIRRQ 47 (319)
T ss_dssp HHHHHSE-EEEEESSCHHHHHHHHHHHHHH
T ss_pred HHHHCCE-EECcCCCCHHHHHHHHHHHHHH
Confidence 3444555 5889999999999998877643
No 15
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=77.12 E-value=12 Score=30.18 Aligned_cols=40 Identities=15% Similarity=0.165 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHhcCCCccccceeeeEEcCCCCCccccccC
Q 027393 147 MIQAIEKRISVFSQVPVENGELIQVLRYEKDQYYKPHHDY 186 (224)
Q Consensus 147 v~~~i~~Ri~~~~gl~~~~~E~lqv~rY~~Gg~y~~H~D~ 186 (224)
.+..+.+|+...+|++.-..+..-+..|.+|+.-.+|.|.
T Consensus 85 ~L~~l~~~~~~~~g~~~~~pn~~LvN~Y~~G~~i~~H~D~ 124 (211)
T 3i3q_A 85 SFHNLCQRAATAAGYPDFQPDACLINRYAPGAKLSLHQDK 124 (211)
T ss_dssp HHHHHHHHHHHHTTCTTCCCCEEEEEEECTTCCEEEECCC
T ss_pred HHHHHHHHHHHhcCCCCcCCCEEEEEEEcCCCCcccccCC
Confidence 6677888888877764333456778889999999999995
No 16
>1q90_G Cytochrome B6F complex subunit PETG; membrane protein complex, photosynthesis, electron transfer, oxydoreductase, chlorophyll; HET: HEM CL1 BCR TDS SQD LFA LMG; 3.10A {Chlamydomonas reinhardtii} SCOP: f.23.26.1
Probab=48.65 E-value=17 Score=21.01 Aligned_cols=25 Identities=28% Similarity=0.430 Sum_probs=20.5
Q ss_pred cchhhhHHHHHHHHHHHHHHHhhhH
Q 027393 5 PSMKIVFGLLTFVTFGMIIGALFQL 29 (224)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~ 29 (224)
.-.-||+||+....+|....|.+|.
T Consensus 5 lL~GIVlGlipvtlaGLfv~Ay~Qy 29 (37)
T 1q90_G 5 LLCGIVLGLVPVTIAGLFVTAYLQY 29 (37)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHHHhhHHHHHHHHHHHHHHHH
Confidence 3356899999888888888888886
No 17
>3nnf_A CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependent enzymes, catal cryptic chlorination, biosynthetic protein; HET: AKG; 2.20A {Lyngbya majuscula} PDB: 3nnj_A 3nnl_A* 3nnm_A
Probab=46.67 E-value=37 Score=29.37 Aligned_cols=129 Identities=12% Similarity=0.038 Sum_probs=61.8
Q ss_pred CCcEEEEcCCCCHHHHHHHHHHhcCCCccceeeeCCCCC---cccccccccceeeeCCCC-cchHHHHHHHHHHHHhcCC
Q 027393 86 SPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGK---GIKSNVRTSSGMFLSPEE-KKYPMIQAIEKRISVFSQV 161 (224)
Q Consensus 86 ~P~I~~~~dfLs~~Ec~~Li~~a~~~l~~s~v~~~~~g~---~~~s~~R~S~~~~l~~~~-~~~~v~~~i~~Ri~~~~gl 161 (224)
+.| .++.|++|++|++.|++..+.....+.+... ... .-...+|+....+-.-.. ..+.+..++..-+..++|-
T Consensus 40 eGY-Lvlk~vFs~eEv~~l~~el~~~~~d~~~~k~-~~~i~~~~s~~lrs~~H~~~~f~~h~~s~l~~rll~vl~~LlG~ 117 (344)
T 3nnf_A 40 KGY-CQIKKIFDFSAIKTIQKTLDQAKQESQISKE-KVTLKLGGIDDIDTNDHAYDLVKYDFVSSFIQEKLALLNYITGK 117 (344)
T ss_dssp HSE-EEETTCSCHHHHHHHHHHHHHHHHHCCCCSH-HHHHHTTSCCCCBCSEEEECSSCHHHHHHHHGGGHHHHHHHHTS
T ss_pred Cce-EEEcCCCCHHHHHHHHHHHHHHhhchhhhcc-cceecCCCccchhcccccchhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 556 5899999999999999888643222211100 000 012335533111100000 0012222222333344554
Q ss_pred CccccceeeeEEcCCCC-CccccccCCCCcccCCCCCceEEEEEEeccCCC---CCceeecC
Q 027393 162 PVENGELIQVLRYEKDQ-YYKPHHDYFSDTFNLKRGGQRIATMLMYLSDNV---EGGETYFP 219 (224)
Q Consensus 162 ~~~~~E~lqv~rY~~Gg-~y~~H~D~~~~~~~~~~~~~R~~T~l~YLNDv~---~GGeT~Fp 219 (224)
..- .-.-+...+.+|+ -|.||.|...-.. ....+|-.|+=+=|.+.. .||=..-|
T Consensus 118 el~-i~qs~~fe~kPG~KGFpWH~D~~~F~~--~~~eD~a~S~WIpLd~i~~e~nGGM~~VP 176 (344)
T 3nnf_A 118 NLM-IMHNALFSVEPNHKGLPWHVGVGSFSF--TKTEDFGASIWIPLDKITKEHRGGMQYVS 176 (344)
T ss_dssp CEE-EEEEEEEEECBTCCBSCSBCTTTTTTT--BCTTSCEEEEEEESSCBCTTTBCSEEEEC
T ss_pred cee-eeecceEeeCCCCCCCCceeccccccc--ccCCCCeEEEEEECCCCCccCCCceEEec
Confidence 321 1223456677764 7899999432111 112347777777787654 35544445
No 18
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=46.42 E-value=1.1e+02 Score=24.78 Aligned_cols=33 Identities=18% Similarity=0.124 Sum_probs=21.0
Q ss_pred cccccCCCCcccCCCCCceEEEEEEeccCCCCCceeecC
Q 027393 181 KPHHDYFSDTFNLKRGGQRIATMLMYLSDNVEGGETYFP 219 (224)
Q Consensus 181 ~~H~D~~~~~~~~~~~~~R~~T~l~YLNDv~~GGeT~Fp 219 (224)
.||.|..... ..-..++|.=+.-...||+|.|-
T Consensus 97 ~wHtD~sy~~------~pp~~~~L~c~~~p~~GG~T~~~ 129 (283)
T 1otj_A 97 NWHTDVTFIE------TPPAGAILAAKELPSTGGDTLWT 129 (283)
T ss_dssp SCBCTTTTSS------SCEEEEEEEEEECCSSCCCEEEE
T ss_pred CcEeeccCcc------CCCceEEEEEEecCCCCCcceee
Confidence 5999986542 12244555445556789999984
No 19
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=46.02 E-value=66 Score=27.00 Aligned_cols=36 Identities=19% Similarity=0.134 Sum_probs=22.4
Q ss_pred CCccccccCCCCcccCCCCCceEEEEEEeccCCCCCceeecC
Q 027393 178 QYYKPHHDYFSDTFNLKRGGQRIATMLMYLSDNVEGGETYFP 219 (224)
Q Consensus 178 g~y~~H~D~~~~~~~~~~~~~R~~T~l~YLNDv~~GGeT~Fp 219 (224)
....||.|...... .-.+++|.-+.-...||+|.|-
T Consensus 98 ~~~~wH~D~s~~~~------pp~~~~l~~~~~p~~GG~T~fa 133 (301)
T 3r1j_A 98 KATRWHTDVTFAAN------YPAASILRAVTLPSYGGSTLWA 133 (301)
T ss_dssp -CCSCBCTTTTSSS------CCSEEEEEEEECCSSCCCEEEE
T ss_pred CCCCCccccCCccC------CCceeEEEEeecCCCCCCCeeE
Confidence 45679999875431 1134555445556789999984
No 20
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=45.23 E-value=26 Score=28.75 Aligned_cols=39 Identities=21% Similarity=0.198 Sum_probs=26.5
Q ss_pred CCCccccccCCCCcccCCCCCceEEEEEEeccCCC-CCceeec
Q 027393 177 DQYYKPHHDYFSDTFNLKRGGQRIATMLMYLSDNV-EGGETYF 218 (224)
Q Consensus 177 Gg~y~~H~D~~~~~~~~~~~~~R~~T~l~YLNDv~-~GGeT~F 218 (224)
|+...||.|...-.. ....+..|+.++|.|+. ++|.+.|
T Consensus 150 ~~~~~wHqD~~~~~~---~p~~~~~~~wi~L~d~~~~nG~l~~ 189 (291)
T 2opw_A 150 GGEVSPHQDASFLYT---EPLGRVLGVWIAVEDATLENGCLWF 189 (291)
T ss_dssp BCCEEEECGGGTSCE---ESSSCEEEEEEESSCBCTTTTCEEE
T ss_pred CCCcCCeeCCccccc---CCCCceEEEEEEcccCCCCCCCEEE
Confidence 456899999853211 11237899999999985 5666655
No 21
>2lx0_A Membrane fusion protein P14; membrane fusion protein transmembrane domain, P14 fast prote ARCH, micelle-peptide complex, membrane protein; NMR {Synthetic}
Probab=44.74 E-value=23 Score=19.20 Aligned_cols=20 Identities=35% Similarity=0.552 Sum_probs=14.0
Q ss_pred hhHHHHHHHHHHHHHHHhhh
Q 027393 9 IVFGLLTFVTFGMIIGALFQ 28 (224)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~ 28 (224)
.+..||||..+|.-.--.+|
T Consensus 11 glvalltflafgfwlfkylq 30 (32)
T 2lx0_A 11 GLVALLTFLAFGFWLFKYLQ 30 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 35678899999876654444
No 22
>1vf5_G Protein PET G; photosynthesis, membrane protein complex, electron transfer complex; HET: HEM TDS PL9 OPC CLA BCR; 3.00A {Mastigocladus laminosus} SCOP: f.23.26.1 PDB: 2d2c_G* 2e74_G* 2e75_G* 2e76_G* 2zt9_G*
Probab=38.47 E-value=22 Score=20.57 Aligned_cols=26 Identities=23% Similarity=0.183 Sum_probs=18.0
Q ss_pred CcchhhhHHHHHHHHHHHHHHHhhhH
Q 027393 4 APSMKIVFGLLTFVTFGMIIGALFQL 29 (224)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 29 (224)
..-.-||+||+....+|....|.+|.
T Consensus 4 plL~GIVlGlipvtl~GLfv~Ay~Qy 29 (37)
T 1vf5_G 4 PLLDGLVLGLVFATLGGLFYAAYQQY 29 (37)
T ss_dssp -----CHHHHHHHHHHHHTHHHHHHT
T ss_pred hhhhhHHHhhHHHHHHHHHHHHHHHH
Confidence 33456899999888888888888885
No 23
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=27.88 E-value=41 Score=27.80 Aligned_cols=36 Identities=17% Similarity=0.065 Sum_probs=23.1
Q ss_pred CCccccccCCCCcccCCCCCceEEEEEEeccCCCCCceeecC
Q 027393 178 QYYKPHHDYFSDTFNLKRGGQRIATMLMYLSDNVEGGETYFP 219 (224)
Q Consensus 178 g~y~~H~D~~~~~~~~~~~~~R~~T~l~YLNDv~~GGeT~Fp 219 (224)
+...||.|...... .-.+++|.-+.-...||+|.|-
T Consensus 92 ~~~~wH~D~sy~~~------pp~~~~l~~~~~p~~GG~T~~~ 127 (277)
T 3pvj_A 92 DNAVWHTDVTFLPT------PALGAVLSAKQLPAYGGDTLWA 127 (277)
T ss_dssp GGSSCBCTTTTSSS------CCCEEEEEEEECCSSCCCEEEE
T ss_pred cCCCceeeCCCcCC------CCceEEEEeeccCCCCCCcEee
Confidence 45679999865421 1134555555556789999984
No 24
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=24.65 E-value=58 Score=26.96 Aligned_cols=37 Identities=19% Similarity=0.147 Sum_probs=22.9
Q ss_pred CCCccccccCCCCcccCCCCCceEEEEEEeccCCCCCceeecC
Q 027393 177 DQYYKPHHDYFSDTFNLKRGGQRIATMLMYLSDNVEGGETYFP 219 (224)
Q Consensus 177 Gg~y~~H~D~~~~~~~~~~~~~R~~T~l~YLNDv~~GGeT~Fp 219 (224)
+....||.|...... .-..++|.=+.-...||+|.|-
T Consensus 102 ~~~~~wHtD~sy~~~------pP~~~~L~c~~~p~~GG~T~~a 138 (301)
T 1oih_A 102 QRANSWHTDVTFVEA------YPKASILRSVVAPASGGDTVWA 138 (301)
T ss_dssp -CCCSCBCTTTTSSS------CCSEEEEEEEECCSSCCCEEEE
T ss_pred CcCcCCEecccCcCC------CCceEEEEEeecCCCCCccccc
Confidence 445679999865421 1134555445556789999884
No 25
>1o51_A Hypothetical protein TM0021; ferredoxin-like fold, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.50A {Thermotoga maritima} SCOP: d.58.5.4
Probab=22.73 E-value=1.2e+02 Score=21.72 Aligned_cols=73 Identities=22% Similarity=0.162 Sum_probs=33.2
Q ss_pred HHHHHHhcC-CCccceeeeCCCCCcccccccccceeeeCCCC-------cchHHHHHHHHHHHHhcCCCccccceeeeEE
Q 027393 102 DYLRAIARP-HLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEE-------KKYPMIQAIEKRISVFSQVPVENGELIQVLR 173 (224)
Q Consensus 102 ~~Li~~a~~-~l~~s~v~~~~~g~~~~s~~R~S~~~~l~~~~-------~~~~v~~~i~~Ri~~~~gl~~~~~E~lqv~r 173 (224)
+.|++.+++ ...-+++..+-.|.+....+++++...++.+. +..+-++++..++.++..--+-..|+.+|++
T Consensus 33 ~~Iv~~~~~~GiaGaTV~rgi~GfG~~g~ih~~~~l~ls~dlPV~Ie~Vd~~eki~~~l~~l~~~v~~Glvt~e~V~V~r 112 (114)
T 1o51_A 33 EYLVKRAYELGMKGVTVYRGIMGFGHKRHMHRSDFFSLSPDLPIVLEIVDEEERINLFLKEIDNIDFDGLVFTADVNVVK 112 (114)
T ss_dssp HHHHHHHHHTTCSCCEEEECSCCCCC-------------CCCEEEEEEEECHHHHHHHHHHHHTCCCCSEEEEEEEECCC
T ss_pred HHHHHHHHHCCCCeEEEEcCcEEECCCCCEEccceeecCCCCCEEEEEEcCHHHHHHHHHHHHHHhCCCEEEEEEEEEEe
Confidence 556665543 34557777666665444444544333222211 1234566777777776542223466777777
Q ss_pred c
Q 027393 174 Y 174 (224)
Q Consensus 174 Y 174 (224)
|
T Consensus 113 ~ 113 (114)
T 1o51_A 113 M 113 (114)
T ss_dssp -
T ss_pred c
Confidence 7
No 26
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=20.75 E-value=66 Score=26.21 Aligned_cols=25 Identities=36% Similarity=0.410 Sum_probs=20.4
Q ss_pred cCCcEEEEcCCCCHHHHHHHHHHhcC
Q 027393 85 WSPRILVLHNFLSMEECDYLRAIARP 110 (224)
Q Consensus 85 ~~P~I~~~~dfLs~~Ec~~Li~~a~~ 110 (224)
.+-+ ++++++|+++||+.|.+..+.
T Consensus 14 ~dGy-vvl~~~l~~e~v~~l~~~~~~ 38 (291)
T 2opw_A 14 QDGF-LVLEGFLSAEECVAMQQRIGE 38 (291)
T ss_dssp HHSE-EEETTSSCHHHHHHHHHHHHH
T ss_pred hCCE-EEecCCCCHHHHHHHHHHHHH
Confidence 3444 689999999999999887764
No 27
>3m05_A Uncharacterized protein PEPE_1480; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 3.15A {Pediococcus pentosaceus}
Probab=20.25 E-value=17 Score=26.53 Aligned_cols=12 Identities=25% Similarity=0.207 Sum_probs=9.9
Q ss_pred ccCCCCCceeec
Q 027393 207 LSDNVEGGETYF 218 (224)
Q Consensus 207 LNDv~~GGeT~F 218 (224)
--+|+.||+|+|
T Consensus 93 pvev~vGGAtvF 104 (114)
T 3m05_A 93 PIKVQVGGATVL 104 (114)
T ss_dssp CEEEEECCEEEE
T ss_pred ceEEEEcceEEE
Confidence 446789999999
Done!