BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027394
(224 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P53223|CAX4_YEAST Dolichyldiphosphatase OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=CAX4 PE=1 SV=1
Length = 239
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 60/122 (49%), Gaps = 10/122 (8%)
Query: 70 EALWATMGSVINSALAMVLKRILNQERPV--------PTLKSDPGMPSSHAQSIFFIGGF 121
EA G ++N V+K I+ Q RPV T++S GMPS+H+Q + F +
Sbjct: 59 EACIVAFGQLMNEIFNNVIKNIIKQPRPVSFGASFQNDTIRSGYGMPSAHSQFMGFCFTY 118
Query: 122 IILSI-VEWLGINEASLMISGFTLAIGSY-LSWLRVSQQLHTIGQVVVGAAVGSTFSLLW 179
L I W +N I LA+ S+ + + RV H + QV+VG +VG+ L+
Sbjct: 119 NSLKIYTSWKNLNFLEKCIFSGALALLSFCVCFSRVYLHYHNLDQVIVGFSVGALTGSLY 178
Query: 180 FF 181
FF
Sbjct: 179 FF 180
>sp|Q86IX2|DOPP1_DICDI Dolichyldiphosphatase 1 OS=Dictyostelium discoideum GN=dolpp1 PE=3
SV=1
Length = 229
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 6/125 (4%)
Query: 62 VIIWRHDSEALWATMGSVINSALAMVLKRILNQERPV---PTLKSDPGMPSSHAQSIFFI 118
+I++R D + +G + + VLK+ + + RP K GMPSSH+Q +FF
Sbjct: 46 LILFRRDVRTISIFLGLLFSECTNYVLKKSIKEHRPTMWKELRKQSYGMPSSHSQFMFFF 105
Query: 119 GGFIILSIVE---WLGINEASLMISGFTLAIGSYLSWLRVSQQLHTIGQVVVGAAVGSTF 175
+ L ++ G ++ F + + +++ RV HT QV G+ +G
Sbjct: 106 AVLMTLFYLKKRIRFGSKILPIISVTFLFFLAAGVAYSRVHLYYHTAKQVFCGSFIGICL 165
Query: 176 SLLWF 180
+W+
Sbjct: 166 GFIWY 170
>sp|B2KI79|DOPP1_RHIFE Dolichyldiphosphatase 1 OS=Rhinolophus ferrumequinum GN=DOLPP1 PE=3
SV=1
Length = 238
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 24/140 (17%)
Query: 59 FSVVIIWRHDSEALWATMGSVINSALAMVLKRILNQERPV----PTLKSDPGMPSSHAQS 114
F +II++ + + G V+N + ++K ++ + RP PT+ + GMPSSH+Q
Sbjct: 47 FVTLIIFKRELHTISFLGGLVLNEGVNWLIKHVIQEPRPCGGPHPTVGTKYGMPSSHSQF 106
Query: 115 IFF--IGGFIILSI------------VEWLGINEASLMISGFTLAIGSYLSWLRVSQQLH 160
++F + F+ L + + W + L+ + F + S+ RV H
Sbjct: 107 MWFFSVYSFLFLYLRMHQTNNARFLDLLWRHVLSLGLLTAAFLV------SYSRVYLLYH 160
Query: 161 TIGQVVVGAAVGSTFSLLWF 180
T QV+ G GS ++ WF
Sbjct: 161 TWSQVLYGGVAGSLMAIAWF 180
>sp|Q86YN1|DOPP1_HUMAN Dolichyldiphosphatase 1 OS=Homo sapiens GN=DOLPP1 PE=1 SV=1
Length = 238
Score = 39.7 bits (91), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 12/145 (8%)
Query: 59 FSVVIIWRHDSEALWATMGSVINSALAMVLKRILNQERPV----PTLKSDPGMPSSHAQS 114
F +II++ + + G +N + ++K ++ + RP + + GMPSSH+Q
Sbjct: 47 FVTLIIFKRELHTISFLGGLALNEGVNWLIKNVIQEPRPCGGPHTAVGTKYGMPSSHSQF 106
Query: 115 IFFIGGFIILSI-VEWLGINEASLM-------ISGFTLAIGSYLSWLRVSQQLHTIGQVV 166
++F + L + + N A + +S LA+ +S+ RV HT QV+
Sbjct: 107 MWFFSVYSFLFLYLRMHQTNNARFLDLLWRHVLSLGLLAVAFLVSYSRVYLLYHTWSQVL 166
Query: 167 VGAAVGSTFSLLWFFSWKSIVLEAF 191
G G ++ WF + ++ F
Sbjct: 167 YGGIAGGLMAIAWFIFTQEVLTPLF 191
>sp|Q9JMF7|DOPP1_MOUSE Dolichyldiphosphatase 1 OS=Mus musculus GN=Dolpp1 PE=2 SV=1
Length = 238
Score = 38.5 bits (88), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 64/145 (44%), Gaps = 12/145 (8%)
Query: 59 FSVVIIWRHDSEALWATMGSVINSALAMVLKRILNQERPV----PTLKSDPGMPSSHAQS 114
F +II++ + + G +N + ++K ++ + RP + + GMPSSH+Q
Sbjct: 47 FLTLIIFKRELHTISFLGGLALNQGVNWLIKHVIQEPRPCGGPHTAVGTKYGMPSSHSQF 106
Query: 115 IFFIGGFIILSI-VEWLGINEASLM------ISGFTLAIGSYL-SWLRVSQQLHTIGQVV 166
++F + L + + N A + + L ++L S+ RV HT QV
Sbjct: 107 MWFFSVYSFLFLYLRMHQTNNARFLDLLWRHVLSLGLLTAAFLVSYSRVYLLYHTWSQVF 166
Query: 167 VGAAVGSTFSLLWFFSWKSIVLEAF 191
G GS ++ WF + I+ F
Sbjct: 167 YGGVAGSLMAVAWFIITQEILTPLF 191
>sp|B0CM95|DOPP1_PAPAN Dolichyldiphosphatase 1 OS=Papio anubis GN=DOLPP1 PE=3 SV=1
Length = 238
Score = 38.5 bits (88), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 65/146 (44%), Gaps = 14/146 (9%)
Query: 59 FSVVIIWRHDSEALWATMGSVINSALAMVLKRILNQERPV----PTLKSDPGMPSSHAQS 114
F +II++ + + G +N + ++K ++ + RP + + GMPSSH+Q
Sbjct: 47 FVTLIIFKRELHTISFLGGLALNEGVNWLIKNVIQEPRPCGGPHTAVGTKYGMPSSHSQF 106
Query: 115 IFF--IGGFIILSIVEWLGINEASLM-------ISGFTLAIGSYLSWLRVSQQLHTIGQV 165
++F I F+ L + N A + +S LA +S+ RV HT QV
Sbjct: 107 MWFFSIYSFLFLYL-RMHQTNNARFLDLLWRHVLSLGLLAAAFLVSYSRVYLLYHTWSQV 165
Query: 166 VVGAAVGSTFSLLWFFSWKSIVLEAF 191
+ G G ++ WF + ++ F
Sbjct: 166 LYGGIAGGLMAIAWFIFTQEVLTPLF 191
>sp|B0KWE9|DOPP1_CALJA Dolichyldiphosphatase 1 OS=Callithrix jacchus GN=DOLPP1 PE=3 SV=1
Length = 238
Score = 38.1 bits (87), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 64/145 (44%), Gaps = 12/145 (8%)
Query: 59 FSVVIIWRHDSEALWATMGSVINSALAMVLKRILNQERPV----PTLKSDPGMPSSHAQS 114
F +II++ + + G +N + ++K ++ + RP + + GMPSSH+Q
Sbjct: 47 FVTLIIFKRELHTISFLGGLALNEGVNWLIKNVIQEPRPCGGPHTAVGTKYGMPSSHSQF 106
Query: 115 IFFIGGFIILSI-VEWLGINEASLM-------ISGFTLAIGSYLSWLRVSQQLHTIGQVV 166
++F + L + + N A + +S LA +S+ RV HT QV+
Sbjct: 107 MWFFSVYSFLFLYLRMHQTNNARFLDLLWRHVLSLGLLAAAFLVSYSRVYLLYHTWSQVL 166
Query: 167 VGAAVGSTFSLLWFFSWKSIVLEAF 191
G G ++ WF + ++ F
Sbjct: 167 YGGIAGGLMAVAWFIFTQEVLTPLF 191
>sp|B1MTH4|DOPP1_CALMO Dolichyldiphosphatase 1 OS=Callicebus moloch GN=DOLPP1 PE=3 SV=1
Length = 238
Score = 37.7 bits (86), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 64/145 (44%), Gaps = 12/145 (8%)
Query: 59 FSVVIIWRHDSEALWATMGSVINSALAMVLKRILNQERPV----PTLKSDPGMPSSHAQS 114
F +II++ + + G +N + ++K ++ + RP + + GMPSSH+Q
Sbjct: 47 FVTLIIFKRELHTISFLGGLALNEGVNWLIKNVIQEPRPCGGPHTAVGTKYGMPSSHSQF 106
Query: 115 IFFIGGFIILSI-VEWLGINEASLM-------ISGFTLAIGSYLSWLRVSQQLHTIGQVV 166
++F + L + + N A + +S LA +S+ RV HT QV+
Sbjct: 107 MWFFSVYSFLFLYLRMHQTNNARFLDLLWRHVLSLGLLAAAFLVSYSRVYLLYHTWSQVL 166
Query: 167 VGAAVGSTFSLLWFFSWKSIVLEAF 191
G G ++ WF + ++ F
Sbjct: 167 YGGIAGGLMAVAWFIFTQEVLTPLF 191
>sp|O53584|DPRP_MYCTU Putative decaprenylphosphoryl-5-phosphoribose phosphatase Rv3807c
OS=Mycobacterium tuberculosis GN=MT3914 PE=3 SV=1
Length = 165
Score = 37.4 bits (85), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 28 QEALVDGSSKL-VASGLESTINRLSKWLVSGLFSVVIIWRHDSEALWATMGSVINSALAM 86
Q ALVD L A GL WL+ L + + R E L A G+ + A+A+
Sbjct: 5 QSALVDRPGMLATARGLSHFGEHCIGWLILALLGAIALPRRRREWLVAGAGAFVAHAIAV 64
Query: 87 VLKRILNQERP 97
++KR++ ++RP
Sbjct: 65 LIKRLVRRQRP 75
>sp|O59747|PDF1_SCHPO Palmitoyl-protein thioesterase-dolichyl pyrophosphate phosphatase
fusion 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=pdf1 PE=1 SV=2
Length = 622
Score = 36.2 bits (82), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 4/109 (3%)
Query: 77 GSVINSALAMVLKRILNQERPVP-TLKSDPGMPSSHAQSIFFIGGFIILSIVEWLGINEA 135
G V+N + V+K L RP GMPSSH+Q + F ++I ++
Sbjct: 462 GQVVNEFINYVVKVSLKYPRPADIEYGVGYGMPSSHSQFMGFFSAYMIAWDYKYRRSQCF 521
Query: 136 SLM---ISGFTLAIGSYLSWLRVSQQLHTIGQVVVGAAVGSTFSLLWFF 181
S++ L + +++ R H + QVV G +G L W +
Sbjct: 522 SMLSFAKYAIYLTLSTFVCSSRYLLDFHYLTQVVYGYMIGFGVGLFWVY 570
>sp|Q9C2M6|DOPP_NEUCR Putative dolichyldiphosphatase OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=17E5.220 PE=3 SV=1
Length = 282
Score = 34.7 bits (78), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 9/83 (10%)
Query: 44 ESTINRLSKWL--VSGLFSVV---IIW-RHDSEALWATMGSVINSALAMVLKRILNQERP 97
+ I+ L WL V VV +IW ++E + G + A LKR++ +ERP
Sbjct: 21 DDPISLLCAWLALVPQALCVVYATLIWSTREAEVILMFAGQLACEAANFALKRLIKEERP 80
Query: 98 V---PTLKSDPGMPSSHAQSIFF 117
T GMPSSHAQ + F
Sbjct: 81 ARIHSTGGKGYGMPSSHAQFVSF 103
>sp|P58932|BCSA_XANAC Cellulose synthase catalytic subunit [UDP-forming] OS=Xanthomonas
axonopodis pv. citri (strain 306) GN=bcsA PE=3 SV=1
Length = 729
Score = 32.3 bits (72), Expect = 2.6, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 5/37 (13%)
Query: 52 KWLVSGLFSVVIIW-----RHDSEALWATMGSVINSA 83
+WLV+ F+ IW +HD +A W +MG V+ ++
Sbjct: 664 RWLVASTFARADIWLSQWGQHDRDAFWRSMGQVLEAS 700
>sp|Q6LQ38|ACYP_PHOPR Acylphosphatase OS=Photobacterium profundum GN=acyP PE=3 SV=1
Length = 90
Score = 32.0 bits (71), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 8/45 (17%)
Query: 31 LVDGSSKLVASGLESTINRLSKWLVSG--------LFSVVIIWRH 67
L DGS +++A G E+ +N+L WL SG + + +I WRH
Sbjct: 39 LPDGSVEVLACGSEANVNKLLAWLESGPKTSRVDNIDAEIIEWRH 83
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.134 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,694,222
Number of Sequences: 539616
Number of extensions: 2591903
Number of successful extensions: 8684
Number of sequences better than 100.0: 39
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 8663
Number of HSP's gapped (non-prelim): 42
length of query: 224
length of database: 191,569,459
effective HSP length: 113
effective length of query: 111
effective length of database: 130,592,851
effective search space: 14495806461
effective search space used: 14495806461
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)