Query 027394
Match_columns 224
No_of_seqs 178 out of 1396
Neff 6.7
Searched_HMMs 46136
Date Fri Mar 29 09:18:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027394.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027394hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3146 Dolichyl pyrophosphate 100.0 1.4E-30 3.1E-35 217.5 19.6 183 42-224 28-222 (228)
2 cd03382 PAP2_dolichyldiphospha 99.9 3.3E-26 7.1E-31 187.0 18.8 135 46-180 19-159 (159)
3 cd03392 PAP2_like_2 PAP2_like_ 99.9 9.4E-25 2E-29 180.9 20.9 164 22-185 8-181 (182)
4 cd03388 PAP2_SPPase1 PAP2_like 99.9 4E-25 8.6E-30 178.8 17.2 137 41-179 4-150 (151)
5 cd03395 PAP2_like_4 PAP2_like_ 99.9 2E-24 4.3E-29 178.7 19.9 152 25-184 4-175 (177)
6 PRK11837 undecaprenyl pyrophos 99.9 5.3E-23 1.1E-27 174.3 20.9 153 24-185 3-174 (202)
7 cd03385 PAP2_BcrC_like PAP2_li 99.9 3.4E-23 7.4E-28 166.1 18.2 130 41-179 2-142 (144)
8 cd03390 PAP2_containing_1_like 99.9 3.7E-23 8E-28 173.5 15.5 141 39-181 13-191 (193)
9 cd03391 PAP2_containing_2_like 99.9 1.4E-22 3E-27 165.7 17.8 131 41-178 14-157 (159)
10 cd03381 PAP2_glucose_6_phospha 99.9 2.8E-22 6.1E-27 173.2 20.0 151 64-222 11-186 (235)
11 cd03383 PAP2_diacylglycerolkin 99.9 8.7E-23 1.9E-27 157.3 14.4 95 75-182 14-108 (109)
12 PLN02525 phosphatidic acid pho 99.9 6.8E-22 1.5E-26 179.7 22.6 128 58-185 23-166 (352)
13 cd03389 PAP2_lipid_A_1_phospha 99.9 3.4E-22 7.4E-27 167.1 17.9 101 71-181 71-184 (186)
14 PRK10699 phosphatidylglyceroph 99.9 4.6E-22 1E-26 172.4 18.7 110 75-189 83-236 (244)
15 PLN02715 lipid phosphate phosp 99.9 5.9E-22 1.3E-26 178.2 18.2 157 22-181 66-266 (327)
16 cd03393 PAP2_like_3 PAP2_like_ 99.9 1.1E-21 2.4E-26 153.8 15.2 101 70-178 14-123 (125)
17 cd03384 PAP2_wunen PAP2, wunen 99.9 6.3E-22 1.4E-26 160.3 14.0 107 72-178 7-148 (150)
18 cd03394 PAP2_like_5 PAP2_like_ 99.9 6.8E-22 1.5E-26 150.9 12.1 99 72-178 6-104 (106)
19 PLN02250 lipid phosphate phosp 99.9 2.9E-21 6.3E-26 173.1 17.8 109 73-181 102-242 (314)
20 PLN02731 Putative lipid phosph 99.9 2.3E-21 4.9E-26 174.6 15.5 109 73-181 121-260 (333)
21 PRK09597 lipid A 1-phosphatase 99.9 4.1E-20 8.9E-25 154.3 17.6 109 63-180 70-185 (190)
22 cd03396 PAP2_like_6 PAP2_like_ 99.8 2.1E-19 4.6E-24 151.3 18.8 107 72-181 70-195 (197)
23 smart00014 acidPPc Acid phosph 99.8 6.2E-19 1.4E-23 135.7 13.7 98 77-178 3-114 (116)
24 COG0671 PgpB Membrane-associat 99.8 4E-18 8.6E-23 140.6 17.2 114 71-185 93-213 (232)
25 cd01610 PAP2_like PAP2_like pr 99.8 2.1E-17 4.5E-22 125.6 15.0 100 75-178 9-120 (122)
26 KOG3030 Lipid phosphate phosph 99.7 8.3E-17 1.8E-21 144.3 17.8 112 72-183 113-261 (317)
27 PF01569 PAP2: PAP2 superfamil 99.7 2.1E-18 4.5E-23 133.5 5.6 109 72-183 3-124 (129)
28 cd03380 PAP2_like_1 PAP2_like_ 99.7 1.2E-15 2.5E-20 129.5 13.5 90 78-177 102-205 (209)
29 KOG4268 Uncharacterized conser 99.7 1.8E-15 3.9E-20 121.9 13.3 129 45-180 37-177 (189)
30 cd03397 PAP2_acid_phosphatase 99.7 2.3E-15 5E-20 130.1 14.3 84 84-177 116-212 (232)
31 KOG2822 Sphingoid base-phospha 99.6 2.3E-15 5E-20 135.8 13.0 134 79-216 121-266 (407)
32 cd03398 PAP2_haloperoxidase PA 99.5 6.7E-14 1.4E-18 120.8 11.0 100 79-178 96-229 (232)
33 cd03386 PAP2_Aur1_like PAP2_li 99.4 6.5E-11 1.4E-15 98.8 17.5 65 103-176 115-179 (186)
34 PF14378 PAP2_3: PAP2 superfam 98.2 6.1E-05 1.3E-09 62.8 14.4 62 106-175 127-188 (191)
35 PF02681 DUF212: Divergent PAP 98.0 2.8E-05 6.1E-10 62.4 7.4 18 159-176 124-141 (141)
36 COG3907 PAP2 (acid phosphatase 97.8 0.00088 1.9E-08 56.7 14.2 137 43-182 72-236 (249)
37 COG1963 Uncharacterized protei 97.8 0.00044 9.5E-09 55.5 11.4 97 79-182 17-150 (153)
38 PF14360 PAP2_C: PAP2 superfam 95.2 0.11 2.4E-06 37.1 6.9 63 106-174 5-67 (74)
39 COG5336 Uncharacterized protei 76.7 9.9 0.00022 29.4 5.9 42 163-214 50-91 (116)
40 PRK02983 lysS lysyl-tRNA synth 68.4 1E+02 0.0022 32.9 13.0 21 137-157 78-98 (1094)
41 PF10261 Scs3p: Inositol phosp 67.1 24 0.00052 30.6 7.0 30 146-177 206-235 (238)
42 PF12270 Cyt_c_ox_IV: Cytochro 50.9 1.3E+02 0.0028 24.1 13.8 36 78-115 49-91 (137)
43 PF05940 NnrS: NnrS protein; 46.8 1.3E+02 0.0028 27.8 8.6 22 199-220 350-371 (379)
44 PF14362 DUF4407: Domain of un 45.3 2.1E+02 0.0045 25.3 9.5 9 107-115 8-16 (301)
45 COG0586 DedA Uncharacterized m 45.1 1.3E+02 0.0028 25.3 7.7 98 73-184 62-166 (208)
46 PRK14792 lipoprotein signal pe 44.8 1.7E+02 0.0037 23.8 9.6 17 80-96 17-33 (159)
47 PF05875 Ceramidase: Ceramidas 41.8 2.3E+02 0.005 24.4 17.5 87 135-223 110-196 (262)
48 COG2035 Predicted membrane pro 40.6 2.2E+02 0.0048 25.5 8.6 73 144-224 199-273 (276)
49 PF04971 Lysis_S: Lysis protei 39.4 78 0.0017 22.3 4.5 37 168-206 7-43 (68)
50 PF07099 DUF1361: Protein of u 39.0 2E+02 0.0044 23.4 7.8 52 167-218 73-125 (168)
51 PF13373 DUF2407_C: DUF2407 C- 37.3 14 0.00031 29.6 0.7 26 158-183 85-111 (140)
52 PF11045 YbjM: Putative inner 37.3 1.7E+02 0.0037 23.1 6.6 55 164-223 63-119 (125)
53 KOG2290 Rhomboid family protei 34.3 3.6E+02 0.0077 26.3 9.3 117 81-213 497-613 (652)
54 PF09583 Phageshock_PspG: Phag 33.6 70 0.0015 22.4 3.5 27 41-67 38-64 (65)
55 PF10011 DUF2254: Predicted me 33.3 3.3E+02 0.0071 25.1 9.0 64 154-220 86-149 (371)
56 PRK14785 lipoprotein signal pe 30.3 3.1E+02 0.0067 22.5 8.8 15 81-95 24-38 (171)
57 PF11345 DUF3147: Protein of u 28.6 2.6E+02 0.0057 21.2 13.0 78 138-219 30-108 (108)
58 PRK11060 rod shape-determining 27.8 3E+02 0.0065 22.5 6.9 48 163-211 66-116 (162)
59 TIGR02975 phageshock_pspG phag 27.8 97 0.0021 21.6 3.4 27 41-67 37-63 (64)
60 KOG3750 Inositol phospholipid 27.3 2.6E+02 0.0056 25.0 6.8 20 156-175 218-237 (270)
61 PF06570 DUF1129: Protein of u 26.2 3.8E+02 0.0083 22.3 9.5 35 17-54 4-38 (206)
62 PF07694 5TM-5TMR_LYT: 5TMR of 25.9 3.3E+02 0.0071 21.4 9.4 38 145-185 65-102 (169)
63 TIGR00844 c_cpa1 na(+)/h(+) an 25.8 4.2E+02 0.009 27.5 8.8 32 159-190 206-237 (810)
64 PF06295 DUF1043: Protein of u 24.7 77 0.0017 24.8 2.8 20 165-184 2-21 (128)
65 PLN02893 Cellulose synthase-li 24.7 6.3E+02 0.014 25.9 9.8 43 143-186 659-701 (734)
66 PRK09459 pspG phage shock prot 24.3 1.4E+02 0.003 21.5 3.7 8 85-92 58-65 (76)
67 COG4858 Uncharacterized membra 23.9 4.6E+02 0.01 22.4 9.6 33 19-54 20-52 (226)
68 PRK00376 lspA lipoprotein sign 23.7 3.9E+02 0.0085 21.5 9.0 13 82-94 19-31 (160)
69 PF08551 DUF1751: Eukaryotic i 23.4 3.1E+02 0.0068 20.3 6.8 43 180-222 31-73 (99)
70 PLN02248 cellulose synthase-li 23.4 5.1E+02 0.011 27.9 9.0 48 142-189 1045-1093(1135)
71 PRK11056 hypothetical protein; 23.4 1.7E+02 0.0037 22.9 4.4 13 160-172 63-75 (120)
72 PF09835 DUF2062: Uncharacteri 23.3 1.1E+02 0.0025 24.1 3.7 23 165-187 121-143 (154)
73 COG1289 Predicted membrane pro 23.1 7.5E+02 0.016 24.6 12.4 23 162-184 481-503 (674)
74 PF01594 UPF0118: Domain of un 22.9 5.1E+02 0.011 22.5 8.3 23 164-186 20-42 (327)
75 PRK13240 pbsY photosystem II p 22.4 1.5E+02 0.0032 18.7 3.2 21 198-218 4-24 (40)
76 KOG3058 Uncharacterized conser 21.0 1.2E+02 0.0027 28.0 3.7 16 156-171 254-269 (351)
No 1
>KOG3146 consensus Dolichyl pyrophosphate phosphatase and related acid phosphatases [Lipid transport and metabolism]
Probab=99.97 E-value=1.4e-30 Score=217.45 Aligned_cols=183 Identities=38% Similarity=0.598 Sum_probs=163.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCC----CCCCCCCCCChHHHHHHH
Q 027394 42 GLESTINRLSKWLVSGLFSVVIIWRHDSEALWATMGSVINSALAMVLKRILNQERPVP----TLKSDPGMPSSHAQSIFF 117 (224)
Q Consensus 42 ~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~ilK~~v~rpRP~~----~~~~~~sFPSgHa~~~~~ 117 (224)
+.+.+..++.||++.+.++.+++.+|+.++++...|.+.++++|..+|+++++|||++ ...++|||||+|++++.+
T Consensus 28 g~~la~~sL~p~~V~~~f~S~~l~rrEl~a~~~~~G~v~Ne~in~viK~il~qpRP~~~~~~t~~s~yGMPSSHSQfM~F 107 (228)
T KOG3146|consen 28 GHLLAYFSLSPVFVSAGFLSVFLFRRELAAIWFVIGQVSNEFINVVIKNILKQPRPVSFPDTTLRSGYGMPSSHSQFMGF 107 (228)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccccCCCCCchHHHHHHH
Confidence 4468889999999999999999999999999999999999999999999999999864 457999999999999999
Q ss_pred HHHHHHHHHHHHhhhhh---HHHHHHHHHHHHHHHHHHHHHHcccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 027394 118 IGGFIILSIVEWLGINE---ASLMISGFTLAIGSYLSWLRVSQQLHTIGQVVVGAAVGSTFSLLWFFSWKSIVLEAFNSN 194 (224)
Q Consensus 118 ~av~~~l~~~~~~~~~~---~~~~l~~~~~~~~~lv~~SRiyLGvH~~sDVl~G~llG~~~a~i~~~l~~~~~~~~~~~s 194 (224)
+++|..+..+.+.+.+. ...+...+.+.++.++|+||+|++.|+.+||++|+++|.+++..||++++.+....|+..
T Consensus 108 fs~y~~l~~y~~~~~~~~s~~~~i~s~~~laLs~~v~~sRVyl~yHt~sQVv~G~ivG~l~g~~Wf~~v~slll~~f~~~ 187 (228)
T KOG3146|consen 108 FSVYSSLSVYKWLGTNNFSRFLFIKSGLLLALSFYVCYSRVYLKYHTLSQVVVGAIVGGLVGILWFYLVNSLLLGLFPWI 187 (228)
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999998887766543 234557788889999999999999999999999999999999999999999999999988
Q ss_pred chhHHHHHHHHHHHHHH-----HHHHHHHhhhhcC
Q 027394 195 LSIQIIVALAAAAFCVG-----FVLYVIKHWLKDE 224 (224)
Q Consensus 195 ~~~~~~v~~~~~~~~~~-----~~~~~~~~~~~~~ 224 (224)
...+++.+.=+.....+ |--|+.+.|+||+
T Consensus 188 l~~~i~~ffyi~dt~~~~~~~~fe~~~~~~~~kn~ 222 (228)
T KOG3146|consen 188 LSLPISRFFYIKDTSLIPKVLHFEYYVARAWFKNQ 222 (228)
T ss_pred HHhhHHHhhhhhccccCCchHHHHHHHHHHHHhhh
Confidence 87888777766777776 9999999999986
No 2
>cd03382 PAP2_dolichyldiphosphatase PAP2_like proteins, dolichyldiphosphatase subfamily. Dolichyldiphosphatase is a membrane-associated protein located in the endoplasmic reticulum and hydrolyzes dolichyl pyrophosphate, as well as dolichylmonophosphate at a low rate. The enzyme is necessary for maintaining proper levels of dolichol-linked oligosaccharides and protein N-glycosylation, and might play a role in re-utilization of the glycosyl carrier lipid for additional rounds of lipid intermediate biosynthesis after its release during protein N-glycosylation reactions.
Probab=99.95 E-value=3.3e-26 Score=186.98 Aligned_cols=135 Identities=35% Similarity=0.516 Sum_probs=103.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCC---CCCCCCCCChHHHHHHHHHHHH
Q 027394 46 TINRLSKWLVSGLFSVVIIWRHDSEALWATMGSVINSALAMVLKRILNQERPVPT---LKSDPGMPSSHAQSIFFIGGFI 122 (224)
Q Consensus 46 ~l~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~ilK~~v~rpRP~~~---~~~~~sFPSgHa~~~~~~av~~ 122 (224)
...+..|+....+...++.++|+....+...+.+.+..++.++|.+++||||+.. .+.++||||||++++++.+++.
T Consensus 19 ~~~~~~p~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~lK~~~~rpRP~~~~~~~~~~~SFPSgHa~~~~~~~~~~ 98 (159)
T cd03382 19 AYLSLLPVAILVGYATLILFRRELEAIYLFIGLLANEALNYVLKRIIKEPRPCSGAYFVRSGYGMPSSHSQFMGFFAVYL 98 (159)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCcCCCCCCCCCchhHHHHHHHHHHH
Confidence 4455566666656666666777766677777788888999999999999999975 3688999999999887667666
Q ss_pred HHHHHHHhhh---hhHHHHHHHHHHHHHHHHHHHHHHcccCChHHHHHHHHHHHHHHHHHH
Q 027394 123 ILSIVEWLGI---NEASLMISGFTLAIGSYLSWLRVSQQLHTIGQVVVGAAVGSTFSLLWF 180 (224)
Q Consensus 123 ~l~~~~~~~~---~~~~~~l~~~~~~~~~lv~~SRiyLGvH~~sDVl~G~llG~~~a~i~~ 180 (224)
.+....+.+. +..+.....+..+++..+++||+|+|+|||+||++|+++|.+++.+|+
T Consensus 99 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~SRvylg~H~~~DVl~G~~lG~~~~~~~~ 159 (159)
T cd03382 99 LLFIYLRLGRLNSLVSRFLLSLGLLLLALLVSYSRVYLGYHTVSQVVVGAIVGILLGILWF 159 (159)
T ss_pred HHHHHHHcccchhHHHHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhcC
Confidence 5544332221 133445566677889999999999999999999999999999887764
No 3
>cd03392 PAP2_like_2 PAP2_like_2 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.94 E-value=9.4e-25 Score=180.87 Aligned_cols=164 Identities=18% Similarity=0.277 Sum_probs=111.2
Q ss_pred hHHHHHHHHh--hcCCcccccchhhHHHHHHHH---HHHHHHHH-HHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHhhCC
Q 027394 22 DVNVFEQEAL--VDGSSKLVASGLESTINRLSK---WLVSGLFS-VVIIWRHDS-EALWATMGSVINSALAMVLKRILNQ 94 (224)
Q Consensus 22 ~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~-~~~~~~r~~-~~~~~~~~~~~~~~~~~ilK~~v~r 94 (224)
....+|+... +++.+.-..|.++..++.+.. +++....+ .++.++|++ ...+...++..+..++.++|..++|
T Consensus 8 ~~~~~D~~i~~~~~~~~~~~~~~~~~~it~lg~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lK~~~~r 87 (182)
T cd03392 8 WLTAFDQSVLSLLRSLRTPLLTAFMTAITFLGSPAVLLIIVLLLALLLLLKRRRRAALFLLLALLGGGALNTLLKLLVQR 87 (182)
T ss_pred hHhhHHHHHHHHHHhcCChHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3444555554 333222234666566555432 33322222 233344443 4455566677888999999999999
Q ss_pred CCCCCCC---CCCCCCCChHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHcccCChHHHHHHHHH
Q 027394 95 ERPVPTL---KSDPGMPSSHAQSIFFIGGFIILSIVEWLGINEASLMISGFTLAIGSYLSWLRVSQQLHTIGQVVVGAAV 171 (224)
Q Consensus 95 pRP~~~~---~~~~sFPSgHa~~~~~~av~~~l~~~~~~~~~~~~~~l~~~~~~~~~lv~~SRiyLGvH~~sDVl~G~ll 171 (224)
|||+... +.++||||||++++++++.++..++.++.+.+..|.....+.+.+++.+++||+|+|+|||+||++|+++
T Consensus 88 ~RP~~~~~~~~~~~sfPSgHa~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~sRv~lg~H~~sDvl~G~~l 167 (182)
T cd03392 88 PRPPLHLLVPEGGYSFPSGHAMGATVLYGFLAYLLARRLPRRRVRILLLILAAILILLVGLSRLYLGVHYPSDVLAGWLL 167 (182)
T ss_pred CCCCCcccCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHH
Confidence 9999643 5789999999999877766665555444332334445556677899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 027394 172 GSTFSLLWFFSWKS 185 (224)
Q Consensus 172 G~~~a~i~~~l~~~ 185 (224)
|.+++.+.+..+++
T Consensus 168 G~~~~~~~~~~~~~ 181 (182)
T cd03392 168 GLAWLALLILLYRR 181 (182)
T ss_pred HHHHHHHHHHHHhh
Confidence 99988877766643
No 4
>cd03388 PAP2_SPPase1 PAP2_like proteins, sphingosine-1-phosphatase subfamily. Sphingosine-1-phosphatase is an intracellular enzyme located in the endoplasmic reticulum, which regulates the level of sphingosine-1-phosphate (S1P), a bioactive lipid. S1P acts as a second messenger in the cell, and extracellularly by binding to G-protein coupled receptors of the endothelial differentiation gene family.
Probab=99.93 E-value=4e-25 Score=178.84 Aligned_cols=137 Identities=15% Similarity=0.201 Sum_probs=93.7
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHhhCCCCCCCC---------CCCCCCCCCh
Q 027394 41 SGLESTINRLSKWLVSGLFSVVIIWRHDS-EALWATMGSVINSALAMVLKRILNQERPVPT---------LKSDPGMPSS 110 (224)
Q Consensus 41 ~~~~~~l~~~~~~~~~~~~~~~~~~~r~~-~~~~~~~~~~~~~~~~~ilK~~v~rpRP~~~---------~~~~~sFPSg 110 (224)
|.++..++.+........++.++.+++++ .....+.....+..++.++|+.++||||+.. .++++|||||
T Consensus 4 d~~~~~it~lg~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~~SFPSg 83 (151)
T cd03388 4 DYYFAFTALLGTHTFYILFLPFLFWNGDPYVGRDLVVVLALGMYIGQFIKDLFCLPRPSSPPVVRLTMSSAALEYGFPST 83 (151)
T ss_pred HHHHHHHHHhcchHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCchhhhhccccCCCCCCChH
Confidence 45555555554432222223333443332 3444455566777888999999999999962 2578999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHcccCChHHHHHHHHHHHHHHHHH
Q 027394 111 HAQSIFFIGGFIILSIVEWLGINEASLMISGFTLAIGSYLSWLRVSQQLHTIGQVVVGAAVGSTFSLLW 179 (224)
Q Consensus 111 Ha~~~~~~av~~~l~~~~~~~~~~~~~~l~~~~~~~~~lv~~SRiyLGvH~~sDVl~G~llG~~~a~i~ 179 (224)
|++++++++.++.....++.+ ..+........++++++++||+|+|+|||+||++|+++|++++.+|
T Consensus 84 H~~~a~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~v~~SRvylgvH~p~DVl~G~~lG~~~~~~~ 150 (151)
T cd03388 84 HAMNATAISFYLLIYLYDRYQ--YPFVLGLILALFYSTLVCLSRIYMGMHSVLDVIAGSLIGVLILLFR 150 (151)
T ss_pred HHHHHHHHHHHHHHHHHHhcc--chHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHc
Confidence 999987777766544433321 1223334456678899999999999999999999999998877654
No 5
>cd03395 PAP2_like_4 PAP2_like_4 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.93 E-value=2e-24 Score=178.70 Aligned_cols=152 Identities=19% Similarity=0.216 Sum_probs=97.9
Q ss_pred HHHHHHh--hcCCc-ccccchhhHHHHHHHHHHHH-HHHHHHH-HHhhhHHH--H--HHHHHHHHHHHHHHHHHHhhCCC
Q 027394 25 VFEQEAL--VDGSS-KLVASGLESTINRLSKWLVS-GLFSVVI-IWRHDSEA--L--WATMGSVINSALAMVLKRILNQE 95 (224)
Q Consensus 25 ~~~~~~~--~~~~~-~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~r~~~~--~--~~~~~~~~~~~~~~ilK~~v~rp 95 (224)
.+|+..+ +|+.. .-..|.++..++.+..+... +.++.++ .++++... + ......+.+.+++.++|..++||
T Consensus 4 ~~D~~l~~~i~~~~~~~~l~~~~~~it~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lK~~~~r~ 83 (177)
T cd03395 4 QIDVWLFLLLNGTLVHPLLDDLMPFLTGKKLSVPIFLLLALFILFRKGPIGLLILLLVLLAVGFADQLASGFLKPLVARL 83 (177)
T ss_pred HHHHHHHHHHhcCCCChhHHHHHHHHHCchhHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4555555 44422 22446666666666443322 1222222 22322111 1 11223345667889999999999
Q ss_pred CCCCC-----------CCCCCCCCChHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHcccCChHH
Q 027394 96 RPVPT-----------LKSDPGMPSSHAQSIFFIGGFIILSIVEWLGINEASLMISGFTLAIGSYLSWLRVSQQLHTIGQ 164 (224)
Q Consensus 96 RP~~~-----------~~~~~sFPSgHa~~~~~~av~~~l~~~~~~~~~~~~~~l~~~~~~~~~lv~~SRiyLGvH~~sD 164 (224)
||+.. .++++||||||++.+++++..+.....++ ....+..+++.++++||+|+|+|||+|
T Consensus 84 RP~~~~~~~~~~~~~~~~~~~SFPSgHt~~a~~~~~~l~~~~~~~--------~~~~~~~~~~~~v~~SRvylG~H~psD 155 (177)
T cd03395 84 RPCNALDGVRLVVLGDQGGSYSFASSHAANSFALALFIWLFFRRG--------LFSPVLLLWALLVGYSRVYVGVHYPGD 155 (177)
T ss_pred CCCCCccccccccccCCCCCCCCChHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHhCCcCHHH
Confidence 99853 34679999999999877666654332221 122345678899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 027394 165 VVVGAAVGSTFSLLWFFSWK 184 (224)
Q Consensus 165 Vl~G~llG~~~a~i~~~l~~ 184 (224)
|++|+++|..++.+.+.+++
T Consensus 156 Vl~G~~lG~~~~~~~~~~~~ 175 (177)
T cd03395 156 VIAGALIGIISGLLFYLLFS 175 (177)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999998887776653
No 6
>PRK11837 undecaprenyl pyrophosphate phosphatase; Provisional
Probab=99.91 E-value=5.3e-23 Score=174.29 Aligned_cols=153 Identities=16% Similarity=0.179 Sum_probs=99.1
Q ss_pred HHHHHHHh--hcCCccc--ccchhhHHHHHHHHHHHHHHHH-HHHHHh-----hhH-HHHHHHHHHHHHHHHHHHHHHhh
Q 027394 24 NVFEQEAL--VDGSSKL--VASGLESTINRLSKWLVSGLFS-VVIIWR-----HDS-EALWATMGSVINSALAMVLKRIL 92 (224)
Q Consensus 24 ~~~~~~~~--~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~-~~~~~~-----r~~-~~~~~~~~~~~~~~~~~ilK~~v 92 (224)
+++|.+.+ +|+.... ..+.++..+++-..++.....+ .++..+ +++ ...+++++++++.+++.++|..+
T Consensus 3 ~~~d~~lf~~in~~~~~~~~l~~~~~~i~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~ 82 (202)
T PRK11837 3 ENLNLSLFSLINATPDSAPWMISLAIFIAKDLILIVPLLAVVLWLWGPRDQLTAQRQLVIKIAIALAISLLVSWTIGHLF 82 (202)
T ss_pred HHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45677766 6653331 3355445555444443322222 232221 122 23445566677888899999999
Q ss_pred CCCCCCCC--------CCCCCCCCChHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHcccCChHH
Q 027394 93 NQERPVPT--------LKSDPGMPSSHAQSIFFIGGFIILSIVEWLGINEASLMISGFTLAIGSYLSWLRVSQQLHTIGQ 164 (224)
Q Consensus 93 ~rpRP~~~--------~~~~~sFPSgHa~~~~~~av~~~l~~~~~~~~~~~~~~l~~~~~~~~~lv~~SRiyLGvH~~sD 164 (224)
+||||+.. .+.++||||||++.+++++..+. ...+. ....+.+.+++++++||+|+|+|||+|
T Consensus 83 ~r~RP~~~~~~~~~~~~~~~~SFPSgHa~~~~~~a~~~l--~~~~~-------~~~~~~~~~a~lva~SRVylGvHypsD 153 (202)
T PRK11837 83 PHDRPFVEGIGYNFLHHAADDSFPSDHGTVIFTFALAFL--FWHRL-------WSGSLLMAIAVAIAWSRVYLGVHWPLD 153 (202)
T ss_pred cCCCCCCCccccccccCCCCCCCchHHHHHHHHHHHHHH--HHHHH-------HHHHHHHHHHHHHHHHHHHhcCccHHH
Confidence 99999742 36789999999998766544322 21110 122355678899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 027394 165 VVVGAAVGSTFSLLWFFSWKS 185 (224)
Q Consensus 165 Vl~G~llG~~~a~i~~~l~~~ 185 (224)
|++|+++|.+.+.+.-..++.
T Consensus 154 VlgG~~lG~~~~~~~~~~~~~ 174 (202)
T PRK11837 154 MLGALLVGMIGCLSAQIIWQL 174 (202)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999988766554443
No 7
>cd03385 PAP2_BcrC_like PAP2_like proteins, BcrC_like subfamily. Several members of this family have been annotated as bacitracin transport permeases, as it was suspected that they form the permease component of an ABC transporter system. It was shown, however, that BcrC from Bacillus subtilis posesses undecaprenyl pyrophosphate (UPP) phospatase activity, and it is hypothesized that it competes with bacitracin for UPP, increasing the cell's resistance to bacitracin.
Probab=99.91 E-value=3.4e-23 Score=166.10 Aligned_cols=130 Identities=17% Similarity=0.215 Sum_probs=90.1
Q ss_pred chhhHHHHHHHHHHHH-HHHHHHHHHhhh-HH-HHHHHHHHHHHHHHHHHHHHhhCCCCCCCC--------CCCCCCCCC
Q 027394 41 SGLESTINRLSKWLVS-GLFSVVIIWRHD-SE-ALWATMGSVINSALAMVLKRILNQERPVPT--------LKSDPGMPS 109 (224)
Q Consensus 41 ~~~~~~l~~~~~~~~~-~~~~~~~~~~r~-~~-~~~~~~~~~~~~~~~~ilK~~v~rpRP~~~--------~~~~~sFPS 109 (224)
|.++..+++...++.. .+...++.++++ ++ ......+...+.+++.++|..++||||... .+.++||||
T Consensus 2 d~~~~~~t~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~lk~~~~r~RP~~~~~~~~~~~~~~~~SFPS 81 (144)
T cd03385 2 DALAIFIAEYLIYILPLLLVVLWLWGGEKQRKVVLFATIAVAVALLINYIIGLLYFHPRPFVVGLGHNLLPHAADSSFPS 81 (144)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHCCcccHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccccccccccCCCCCCCCc
Confidence 4556666666555432 333334443333 23 344556667788899999999999999732 346799999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHcccCChHHHHHHHHHHHHHHHHH
Q 027394 110 SHAQSIFFIGGFIILSIVEWLGINEASLMISGFTLAIGSYLSWLRVSQQLHTIGQVVVGAAVGSTFSLLW 179 (224)
Q Consensus 110 gHa~~~~~~av~~~l~~~~~~~~~~~~~~l~~~~~~~~~lv~~SRiyLGvH~~sDVl~G~llG~~~a~i~ 179 (224)
||++++++++..+ ...++ + ........+++++++||+|+|+|||+||++|+++|.+.+.+.
T Consensus 82 gH~~~~~~~~~~l--~~~~~---~----~~~~~~~~~a~~v~~SRvylg~H~~sDVl~G~~lg~~~~~~~ 142 (144)
T cd03385 82 DHTTLFFSIAFSL--LLRRR---K----WAGWILLILALLVAWSRIYLGVHYPLDMLGAALVAVLSALLV 142 (144)
T ss_pred HHHHHHHHHHHHH--HHHhh---H----HHHHHHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHH
Confidence 9999886554432 22211 1 122346678899999999999999999999999998887654
No 8
>cd03390 PAP2_containing_1_like PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_1. Most likely membrane-associated phosphatidic acid phosphatases. Plant members of this group are constitutively expressed in many tissues and exhibit both diacylglycerol pyrophosphate phosphatase activity as well as phosphatidate (PA) phosphatase activity, they may have a more generic housekeeping role in lipid metabolism.
Probab=99.90 E-value=3.7e-23 Score=173.53 Aligned_cols=141 Identities=23% Similarity=0.266 Sum_probs=101.0
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHhhh-HH----HHHHHHHHHHHHHHHHHHHHhhCCCCCCC-----CC-------
Q 027394 39 VASGLESTINRLSKWLVSGLFSVVIIWRHD-SE----ALWATMGSVINSALAMVLKRILNQERPVP-----TL------- 101 (224)
Q Consensus 39 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~r~-~~----~~~~~~~~~~~~~~~~ilK~~v~rpRP~~-----~~------- 101 (224)
+.+.+...++...|+.++++.. +.++++ ++ .+..+.+.+++..++.++|..++||||+. +.
T Consensus 13 i~~~~l~~~~~~ip~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~ 90 (193)
T cd03390 13 VPTWLLVIISVGIPLLVIILIS--LFFRRSLWDLHTSLLGLLLSVSLNGVITNVLKNYAGRPRPDFLARCFPDGGTPSDT 90 (193)
T ss_pred EcHHHHHHHHHHHHHHHHHHHH--HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHhCCCCCccccc
Confidence 4455556666666665543332 222322 22 13455667788899999999999999973 11
Q ss_pred ----------------CCCCCCCChHHHHHHHHHHHHHHHHHHHhhh-----hhHHHHHHHHHHHHHHHHHHHHHHcccC
Q 027394 102 ----------------KSDPGMPSSHAQSIFFIGGFIILSIVEWLGI-----NEASLMISGFTLAIGSYLSWLRVSQQLH 160 (224)
Q Consensus 102 ----------------~~~~sFPSgHa~~~~~~av~~~l~~~~~~~~-----~~~~~~l~~~~~~~~~lv~~SRiyLGvH 160 (224)
+..+||||||++++++.++++.+++..+.+. +.++..+..+.+++++++|+||+|+|+|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~SFPSGHas~a~~~~~~l~l~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~SRi~~g~H 170 (193)
T cd03390 91 LVGIDICCTGDPGVLKEGRKSFPSGHSSFAFAGLGFLSLYLAGKLHIFDPRGSSWRLLLALLPLLLAILVAVSRTRDYRH 170 (193)
T ss_pred ccCCCeecCCCHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHhhcccccchHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 1237999999999988888887776554321 2345556667788999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHHHH
Q 027394 161 TIGQVVVGAAVGSTFSLLWFF 181 (224)
Q Consensus 161 ~~sDVl~G~llG~~~a~i~~~ 181 (224)
||+||++|+++|.+++.+.|.
T Consensus 171 ~~sDVlaG~~lG~~~a~~~~~ 191 (193)
T cd03390 171 HFSDVIAGSLIGLIIAYLSYR 191 (193)
T ss_pred CHHHHHHHHHHHHHHHHheeE
Confidence 999999999999998877654
No 9
>cd03391 PAP2_containing_2_like PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_2. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to eukaryota, lacks functional characterization and may act as a membrane-associated phosphatidic acid phosphatase.
Probab=99.90 E-value=1.4e-22 Score=165.67 Aligned_cols=131 Identities=20% Similarity=0.265 Sum_probs=90.1
Q ss_pred chhhHHHHHH---HHHHHHHHHHHHHHHhhhH-HH-HHHHHHHHHHHHHHHHHHHhhCCCCCCCC--------CCCCCCC
Q 027394 41 SGLESTINRL---SKWLVSGLFSVVIIWRHDS-EA-LWATMGSVINSALAMVLKRILNQERPVPT--------LKSDPGM 107 (224)
Q Consensus 41 ~~~~~~l~~~---~~~~~~~~~~~~~~~~r~~-~~-~~~~~~~~~~~~~~~ilK~~v~rpRP~~~--------~~~~~sF 107 (224)
|.++..++.+ ..|+.+.+++.++..+++. +. ...+.+.+.+.+++.++|..++||||+.. ..+++||
T Consensus 14 ~~~~~~~t~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~SF 93 (159)
T cd03391 14 RPLVKLLELSGHGIPWLAGTISCLWISSSPAGQEVLVNLLLGLLLDIITVAILKALVRRRRPAYNSPDMLDYVAVDKYSF 93 (159)
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCccchhccCCCCCC
Confidence 4555554444 3455554444443333332 22 34455666778889999999999999953 2367999
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHcccCChHHHHHHHHHHHHHHHH
Q 027394 108 PSSHAQSIFFIGGFIILSIVEWLGINEASLMISGFTLAIGSYLSWLRVSQQLHTIGQVVVGAAVGSTFSLL 178 (224)
Q Consensus 108 PSgHa~~~~~~av~~~l~~~~~~~~~~~~~~l~~~~~~~~~lv~~SRiyLGvH~~sDVl~G~llG~~~a~i 178 (224)
||||++++++++.++.....++ .........++.++++||+|+|+|||+||++|+++|++.+..
T Consensus 94 PSGHa~~a~a~a~~l~~~~~~~-------~~~~~~~~~~a~~v~~SRvylg~H~psDVlaG~~lG~~~~~~ 157 (159)
T cd03391 94 PSGHASRAAFVARFLLNHLVLA-------VPLRVLLVLWATVVGISRVLLGRHHVLDVLAGAFLGYLEALL 157 (159)
T ss_pred CchhHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHHHHh
Confidence 9999999877766554332111 123345667899999999999999999999999999877653
No 10
>cd03381 PAP2_glucose_6_phosphatase PAP2_like proteins, glucose-6-phosphatase subfamily. Glucose-6-phosphatase converts glucose-6-phosphate into free glucose and is active in the lumen of the endoplasmic reticulum, where it is bound to the membrane. The generation of free glucose is an important control point in metabolism, and stands at the end of gluconeogenesis and the release of glucose from glycogen. Deficiency of glucose-6-phosphatase leads to von Gierke's disease.
Probab=99.90 E-value=2.8e-22 Score=173.19 Aligned_cols=151 Identities=21% Similarity=0.241 Sum_probs=95.4
Q ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCC---------------------CCCCCCCCCChHHHHHHHHHHHH
Q 027394 64 IWRHDSEALWATMGSVINSALAMVLKRILNQERPVP---------------------TLKSDPGMPSSHAQSIFFIGGFI 122 (224)
Q Consensus 64 ~~~r~~~~~~~~~~~~~~~~~~~ilK~~v~rpRP~~---------------------~~~~~~sFPSgHa~~~~~~av~~ 122 (224)
..+|+.. ...+...+.+..+|.++|.+++||||+. .++++|||||||++.++++...+
T Consensus 11 ~~~~~~g-~~l~~~~~~~~~ln~vlK~ii~r~RP~~~~~~~~~~~~~~~p~~~~~~l~c~tgysfPSGHam~a~a~~~~l 89 (235)
T cd03381 11 HLSQSVG-IKLLWVAVIGDWLNLVFKWILFGQRPYWWVHETDYYSNSSVPKIEQFPLTCETGPGSPSGHAMGTTAVLLVM 89 (235)
T ss_pred hcchHHH-HHHHHHHHHHHHHHHHHHHHhCCCCCCchhcccccccccccccccccccccCCCCCCCcHHHHHHHHHHHHH
Confidence 3455433 3333344455568999999999999973 23678999999999876544443
Q ss_pred HHHHHHHh----hhhhHHHHHHHHHHHHHHHHHHHHHHcccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCchhH
Q 027394 123 ILSIVEWL----GINEASLMISGFTLAIGSYLSWLRVSQQLHTIGQVVVGAAVGSTFSLLWFFSWKSIVLEAFNSNLSIQ 198 (224)
Q Consensus 123 ~l~~~~~~----~~~~~~~~l~~~~~~~~~lv~~SRiyLGvH~~sDVl~G~llG~~~a~i~~~l~~~~~~~~~~~s~~~~ 198 (224)
...+.... ..+..|..+..+...+.+++|+||+|+|+|||+||++|+++|+.++.... +. +.-+..+. +
T Consensus 90 ~~~l~~~~~~r~~~~~~~~~~~~~~~~~~~~V~~SRvYLgvHfpsDVlaG~~lGi~~~~~~~----~~-~~~~~~~~--~ 162 (235)
T cd03381 90 VTALLSHLAGRKRSRFLRVMLWLVFWGVQLAVCLSRIYLAAHFPHQVIAGVISGIAVAETFS----HI-RYIYSASL--K 162 (235)
T ss_pred HHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHH----Hh-HHHhhhhh--h
Confidence 33222211 11223445566667778889999999999999999999999988775432 21 11122222 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhh
Q 027394 199 IIVALAAAAFCVGFVLYVIKHWLK 222 (224)
Q Consensus 199 ~~v~~~~~~~~~~~~~~~~~~~~~ 222 (224)
--+.+..+-.+.+...|+++.++.
T Consensus 163 ~~~~~~~~l~~~a~~~y~~~~~~g 186 (235)
T cd03381 163 RYVLITFFLFGFALGFYLLLKWLG 186 (235)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC
Confidence 223344344455667787776653
No 11
>cd03383 PAP2_diacylglycerolkinase PAP2_like proteins, diacylglycerol_kinase like sub-family. In some prokaryotes, PAP2_like phosphatase domains appear fused to E. coli DAGK-like trans-membrane diacylglycerol kinase domains. The cellular function of these architectures remains to be determined.
Probab=99.90 E-value=8.7e-23 Score=157.26 Aligned_cols=95 Identities=31% Similarity=0.412 Sum_probs=75.2
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Q 027394 75 TMGSVINSALAMVLKRILNQERPVPTLKSDPGMPSSHAQSIFFIGGFIILSIVEWLGINEASLMISGFTLAIGSYLSWLR 154 (224)
Q Consensus 75 ~~~~~~~~~~~~ilK~~v~rpRP~~~~~~~~sFPSgHa~~~~~~av~~~l~~~~~~~~~~~~~~l~~~~~~~~~lv~~SR 154 (224)
+.+.+.+.+++.++|++++||||+. .||||||++++++++.++..... + .....+...++.++++||
T Consensus 14 ~~~~~~~~~i~~~lK~~~~r~RP~~-----~sFPSgHt~~a~a~a~~l~~~~~-~-------~~~~~~~~~~a~lv~~SR 80 (109)
T cd03383 14 FVSLLIVIIVVVILKAYFGRGTPLE-----GGMPSGHAAIAFSIATAISLITN-N-------PIISILSVLLAVMVAHSR 80 (109)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCC-----CCCChHHHHHHHHHHHHHHHHHh-h-------HHHHHHHHHHHHHHHHHH
Confidence 3456677889999999999999973 59999999998776665543221 1 123445667889999999
Q ss_pred HHcccCChHHHHHHHHHHHHHHHHHHHH
Q 027394 155 VSQQLHTIGQVVVGAAVGSTFSLLWFFS 182 (224)
Q Consensus 155 iyLGvH~~sDVl~G~llG~~~a~i~~~l 182 (224)
+|+|+|||+||++|+++|.+.+.+.+.+
T Consensus 81 vylg~H~psDVlaG~~lG~~~~~~~~~~ 108 (109)
T cd03383 81 VEMKIHTMWEVVVGAILGALITLLIFKI 108 (109)
T ss_pred HHcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988876643
No 12
>PLN02525 phosphatidic acid phosphatase family protein
Probab=99.90 E-value=6.8e-22 Score=179.67 Aligned_cols=128 Identities=16% Similarity=0.276 Sum_probs=92.2
Q ss_pred HHHHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHhhCCCCCCCC-------------CCCCCCCCChHHHHHHHHHHHHH
Q 027394 58 LFSVVIIWRHDS-EALWATMGSVINSALAMVLKRILNQERPVPT-------------LKSDPGMPSSHAQSIFFIGGFII 123 (224)
Q Consensus 58 ~~~~~~~~~r~~-~~~~~~~~~~~~~~~~~ilK~~v~rpRP~~~-------------~~~~~sFPSgHa~~~~~~av~~~ 123 (224)
.++.++.++++. .+..+...+..+..++..+|..++||||..+ ...+|||||+|++++++++.++.
T Consensus 23 ~~Lp~l~w~~~~~~~~~lv~ll~~~~~l~~~lKd~v~rPRP~~pp~~ri~~~~~~~~~a~eYsFPSgHt~nA~av~~~ll 102 (352)
T PLN02525 23 AFLPLLFWSGHGKLARQMTLLMAFCDYVGNCIKDVVSAPRPSCPPVRRVTATKDEEENAMEYGLPSSHTLNTVCLSGYLL 102 (352)
T ss_pred HHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCCcchhhhhcccccccCCCCCCCChHHHHHHHHHHHHHH
Confidence 333444454443 2233334456667888999999999999852 23679999999999988888776
Q ss_pred HHHHHHhhh--hhHHHHHHHHHHHHHHHHHHHHHHcccCChHHHHHHHHHHHHHHHHHHHHHHH
Q 027394 124 LSIVEWLGI--NEASLMISGFTLAIGSYLSWLRVSQQLHTIGQVVVGAAVGSTFSLLWFFSWKS 185 (224)
Q Consensus 124 l~~~~~~~~--~~~~~~l~~~~~~~~~lv~~SRiyLGvH~~sDVl~G~llG~~~a~i~~~l~~~ 185 (224)
.++.++.+. +..+.....+..++++++++||+|+|+|||+||++|+++|++++.+++.+.+.
T Consensus 103 ~~l~~~~~~~~~~~~~~~~~l~~l~allV~~SRlYLGvH~psDVl~G~~lG~~i~~~~~~~~~~ 166 (352)
T PLN02525 103 HYVLSYLQNVDASVIFAGLALFCLLVALVGFGRLYLGMHSPIDIIAGLAIGLVILAFWLTVDEY 166 (352)
T ss_pred HHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHheeccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 655443321 11222233456678999999999999999999999999999999888776664
No 13
>cd03389 PAP2_lipid_A_1_phosphatase PAP2_like proteins, Lipid A 1-phosphatase subfamily. Lipid A 1-phosphatase, or LpxE from Francisella novicida selectively dephosphorylates lipid A at the 1-position. Lipid A is the membrane-anchor component of lipopolysaccharides (LPS), the major constituents of the outer membrane in many gram-negative bacteria.
Probab=99.90 E-value=3.4e-22 Score=167.06 Aligned_cols=101 Identities=18% Similarity=0.203 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCCCCC-------------CCCCCCCCChHHHHHHHHHHHHHHHHHHHhhhhhHHH
Q 027394 71 ALWATMGSVINSALAMVLKRILNQERPVPT-------------LKSDPGMPSSHAQSIFFIGGFIILSIVEWLGINEASL 137 (224)
Q Consensus 71 ~~~~~~~~~~~~~~~~ilK~~v~rpRP~~~-------------~~~~~sFPSgHa~~~~~~av~~~l~~~~~~~~~~~~~ 137 (224)
.+.+..++..+.+++.++|..++||||... .+.++||||||++.+++.+.++.... ++ ++
T Consensus 71 ~~~l~~~~~~~~~i~~~lK~~~~R~RP~~~~~~~~~~~~~~~~~~~~~SFPSGHa~~a~~~~~~l~~~~-~~-----~~- 143 (186)
T cd03389 71 GLFLFATVALSGILVNLLKFIIGRARPKLLFDDGLYGFDPFHADYAFTSFPSGHSATAGAAAAALALLF-PR-----YR- 143 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCChhhcCCcccccccccCCCCCCcCcHHHHHHHHHHHHHHHHH-HH-----HH-
Confidence 345555667778899999999999999842 13558999999999877766665433 21 11
Q ss_pred HHHHHHHHHHHHHHHHHHHcccCChHHHHHHHHHHHHHHHHHHH
Q 027394 138 MISGFTLAIGSYLSWLRVSQQLHTIGQVVVGAAVGSTFSLLWFF 181 (224)
Q Consensus 138 ~l~~~~~~~~~lv~~SRiyLGvH~~sDVl~G~llG~~~a~i~~~ 181 (224)
.....++.++++||+|+|+|||+||++|+++|.+++.+.|.
T Consensus 144 ---~~~~~~~~lv~~SRiylg~H~~sDVl~G~~lG~~~~~~~~~ 184 (186)
T cd03389 144 ---WAFILLALLIAFSRVIVGAHYPSDVIAGSLLGAVTALALYQ 184 (186)
T ss_pred ---HHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHH
Confidence 12356778999999999999999999999999988776553
No 14
>PRK10699 phosphatidylglycerophosphatase B; Provisional
Probab=99.89 E-value=4.6e-22 Score=172.42 Aligned_cols=110 Identities=10% Similarity=0.039 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCC------C--------------------------------------CCCCCCCCCCh
Q 027394 75 TMGSVINSALAMVLKRILNQERPV------P--------------------------------------TLKSDPGMPSS 110 (224)
Q Consensus 75 ~~~~~~~~~~~~ilK~~v~rpRP~------~--------------------------------------~~~~~~sFPSg 110 (224)
.++++++..++.++|+.++||||+ + .++++||||||
T Consensus 83 ~~~i~~~~~~k~~iK~~~~epRP~v~~l~~~~~~~~~~FY~l~~~~r~~~v~~~~~~~~~~~~w~~~hw~~~~gySFPSG 162 (244)
T PRK10699 83 AAAILVGQGVKSWIKERVQEPRPFVVWLEKTHHIPVDEFYTLKRAERGELVKEQLAEQSNIPQWLRSHWQKETGFAFPSG 162 (244)
T ss_pred HHHHHHHHHHHHHHHHhccCCCchhHHHHHhcCCCHHHHHccCHHHHHHHHHHHHhccccCCHHHHhccCCCCCCCCChH
Confidence 445678888899999999999994 0 14578999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHcccCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 027394 111 HAQSIFFIGGFIILSIVEWLGINEASLMISGFTLAIGSYLSWLRVSQQLHTIGQVVVGAAVGSTFSLLWFFSWKSIVLE 189 (224)
Q Consensus 111 Ha~~~~~~av~~~l~~~~~~~~~~~~~~l~~~~~~~~~lv~~SRiyLGvH~~sDVl~G~llG~~~a~i~~~l~~~~~~~ 189 (224)
|+++++.++.+...++..+. +.....+..+++..+++||+|+|+|||+||++|.++|.+++.+.+++.++...+
T Consensus 163 Ha~~a~~~~l~~~~ll~~~~-----~~~~~~~~~~wa~~v~~SRvyLGvH~psDVlaG~llG~~~~~l~~~l~~~~~~~ 236 (244)
T PRK10699 163 HTMFAASWALLAVGLLWPRR-----RYKTVALLMLWATGVMGSRLLLGMHWPRDLVVATLISWLLVTVATWLAQRICGP 236 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHccCcCHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99987654443332222221 112234566789999999999999999999999999999998888777654443
No 15
>PLN02715 lipid phosphate phosphatase
Probab=99.89 E-value=5.9e-22 Score=178.23 Aligned_cols=157 Identities=18% Similarity=0.144 Sum_probs=110.1
Q ss_pred hHHHHHHHHhhcCCc-c-------cccchhhHHHHHHHHHHHHHHHHHHHHHhhhH----H-HHHHHHHHHHHHHHHHHH
Q 027394 22 DVNVFEQEALVDGSS-K-------LVASGLESTINRLSKWLVSGLFSVVIIWRHDS----E-ALWATMGSVINSALAMVL 88 (224)
Q Consensus 22 ~~~~~~~~~~~~~~~-~-------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~r~~----~-~~~~~~~~~~~~~~~~il 88 (224)
.+.||.|++..|+.+ . .+...+...++-+.|.++ ++...+++|+. . .+.++.++.++.+++.++
T Consensus 66 ~~~Pf~R~~~~~~~~~i~yP~~~~tVp~~~l~vi~~liPii~---i~~~~~~r~~~~~~~~~~l~l~~al~~t~lit~~l 142 (327)
T PLN02715 66 LISPFYRYVGKDMMTDLKYPFKDNTVPIWSVPVYAVLLPIIL---FVCFYLKRRCVYDLHHSILGLLFAVLITGVITDSI 142 (327)
T ss_pred cCCCccccCCcccchhccCCCCCCcccHHHHHHHHHHHHHHH---HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556677776655333 2 233333334444444332 22233344432 1 234556778889999999
Q ss_pred HHhhCCCCCCC-----C---------------------CCCCCCCCChHHHHHHHHHHHHHHHHHHHhhh-----hhHHH
Q 027394 89 KRILNQERPVP-----T---------------------LKSDPGMPSSHAQSIFFIGGFIILSIVEWLGI-----NEASL 137 (224)
Q Consensus 89 K~~v~rpRP~~-----~---------------------~~~~~sFPSgHa~~~~~~av~~~l~~~~~~~~-----~~~~~ 137 (224)
|..++||||+- | .+...||||||++.+++.++|+++++..+.+. ..+|.
T Consensus 143 K~~vGRpRPdfl~rC~Pd~~~~~~~l~~~iCt~~~~~l~dg~~SFPSGHSS~sfagl~~Lsl~L~~kl~~~~~~~~~~k~ 222 (327)
T PLN02715 143 KVATGRPRPNFYWRCFPDGKELYDALGGVICHGKAAEVKEGHKSFPSGHTSWSFAGLTFLSLYLSGKIKAFNGEGHVAKL 222 (327)
T ss_pred HHhhCCCCCCchhhcCccccccccccccccccCccccccccCCCCCchhHHHHHHHHHHHHHHHHHhhccccccchHHHH
Confidence 99999999982 0 13458999999999999999988887665432 23556
Q ss_pred HHHHHHHHHHHHHHHHHHHcccCChHHHHHHHHHHHHHHHHHHH
Q 027394 138 MISGFTLAIGSYLSWLRVSQQLHTIGQVVVGAAVGSTFSLLWFF 181 (224)
Q Consensus 138 ~l~~~~~~~~~lv~~SRiyLGvH~~sDVl~G~llG~~~a~i~~~ 181 (224)
.+..++++++.++++||+|+++||++||++|+++|++++.+.|.
T Consensus 223 ~l~~lpll~A~lIalSRv~Dy~Hh~sDVlaG~lLG~~~a~~~y~ 266 (327)
T PLN02715 223 CLVIFPLLAACLVGISRVDDYWHHWQDVFAGALIGILVAAFCYR 266 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 67778889999999999999999999999999999998876654
No 16
>cd03393 PAP2_like_3 PAP2_like_3 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria and archaea, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.88 E-value=1.1e-21 Score=153.84 Aligned_cols=101 Identities=20% Similarity=0.255 Sum_probs=75.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCCCCC---------CCCCCCCCChHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH
Q 027394 70 EALWATMGSVINSALAMVLKRILNQERPVPT---------LKSDPGMPSSHAQSIFFIGGFIILSIVEWLGINEASLMIS 140 (224)
Q Consensus 70 ~~~~~~~~~~~~~~~~~ilK~~v~rpRP~~~---------~~~~~sFPSgHa~~~~~~av~~~l~~~~~~~~~~~~~~l~ 140 (224)
.+.......+.+..++.++|..++||||+.. .++++||||||++.++.+...+.... ++ ....
T Consensus 14 ~~~~~~~~~~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~~sFPSgHa~~~~~~~~~~~~~~-~~-------~~~~ 85 (125)
T cd03393 14 LGRYLGLALCASGYLNAALKEVFKIPRPFTYDGIQAIYEESAGGYGFPSGHAQTSATFWGSLMLHV-RK-------KWFT 85 (125)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCcCCCcccchhccCCCCCCCCCcHHHHHHHHHHHHHHHHH-HH-------HHHH
Confidence 3455556677888999999999999999852 35679999999998765444332221 11 1223
Q ss_pred HHHHHHHHHHHHHHHHcccCChHHHHHHHHHHHHHHHH
Q 027394 141 GFTLAIGSYLSWLRVSQQLHTIGQVVVGAAVGSTFSLL 178 (224)
Q Consensus 141 ~~~~~~~~lv~~SRiyLGvH~~sDVl~G~llG~~~a~i 178 (224)
.+..+++..+++||+|+|+|||+||++|+++|..++.+
T Consensus 86 ~~~~~~~~~v~~sRv~lg~H~~sDVl~G~~lG~~~~~~ 123 (125)
T cd03393 86 LIGVVLVVLISFSRLYLGVHWPSDVIGGVLIGLLVLVL 123 (125)
T ss_pred HHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHH
Confidence 34556788999999999999999999999999887654
No 17
>cd03384 PAP2_wunen PAP2, wunen subfamily. Most likely a family of membrane associated phosphatidic acid phosphatases. Wunen is a drosophila protein expressed in the central nervous system, which provides repellent activity towards primordial germ cells (PGCs), controls the survival of PGCs and is essential in the migration process of these cells towards the somatic gonadal precursors.
Probab=99.88 E-value=6.3e-22 Score=160.29 Aligned_cols=107 Identities=22% Similarity=0.278 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCCCCC--------------------------------CCCCCCCCChHHHHHHHHH
Q 027394 72 LWATMGSVINSALAMVLKRILNQERPVPT--------------------------------LKSDPGMPSSHAQSIFFIG 119 (224)
Q Consensus 72 ~~~~~~~~~~~~~~~ilK~~v~rpRP~~~--------------------------------~~~~~sFPSgHa~~~~~~a 119 (224)
..++.++..+.+++.++|..++||||+-. .++++||||||++.+++.+
T Consensus 7 ~~~~~~~~~~~l~~~~lK~~igrpRP~fl~~c~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SFPSGHs~~a~~~~ 86 (150)
T cd03384 7 GVFLFGLFATQLLTDLGKYVTGRLRPHFLDVCKPNYTDLTCSLDHQYIADCTCCTGDPDLIREARLSFPSGHASLSMYAA 86 (150)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCCChHhhcCCCCCCcccccCccccccceeeCCCHHHHhcCccCCCcHhHHHHHHHH
Confidence 45677888899999999999999999731 1346999999999998888
Q ss_pred HHHHHHHHHHhhh---hhHHHHHHHHHHHHHHHHHHHHHHcccCChHHHHHHHHHHHHHHHH
Q 027394 120 GFIILSIVEWLGI---NEASLMISGFTLAIGSYLSWLRVSQQLHTIGQVVVGAAVGSTFSLL 178 (224)
Q Consensus 120 v~~~l~~~~~~~~---~~~~~~l~~~~~~~~~lv~~SRiyLGvH~~sDVl~G~llG~~~a~i 178 (224)
+++.+++..+.+. +.+|..+..+++.++.++++||+|+|+|||+||++|+++|++++..
T Consensus 87 ~~l~l~l~~~~~~~~~~~~~~~~~~~~~~~a~~v~~sRv~~~~H~~sDviaG~~lG~~~~~~ 148 (150)
T cd03384 87 VFLALYLQARLKLRGSRLLRPLLQFLLLALALYVGLSRISDYKHHWSDVLAGALLGSVIALF 148 (150)
T ss_pred HHHHHHHHHHhccccchHHHHHHHHHHHHHHHHHhHhhhccCCCCHHHHHHHHHHHHHHHHH
Confidence 8888777655432 2345566777889999999999999999999999999999988754
No 18
>cd03394 PAP2_like_5 PAP2_like_5 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.88 E-value=6.8e-22 Score=150.92 Aligned_cols=99 Identities=24% Similarity=0.295 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH
Q 027394 72 LWATMGSVINSALAMVLKRILNQERPVPTLKSDPGMPSSHAQSIFFIGGFIILSIVEWLGINEASLMISGFTLAIGSYLS 151 (224)
Q Consensus 72 ~~~~~~~~~~~~~~~ilK~~v~rpRP~~~~~~~~sFPSgHa~~~~~~av~~~l~~~~~~~~~~~~~~l~~~~~~~~~lv~ 151 (224)
...+.+++++..++.++|..++||||+.....++||||||++.+++++.++... .+.+ ........++.+++
T Consensus 6 ~~~~~~~~~~~~~~~~lK~~~~r~RP~~~~~~~~sfPSgHa~~a~~~~~~~~~~----~~~~----~~~~~~~~~~~~v~ 77 (106)
T cd03394 6 LILAEAAALTAAVTEGLKFAVGRARPDGSNNGYRSFPSGHTASAFAAATFLQYR----YGWR----WYGIPAYALASLVG 77 (106)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCccCcHHHHHHHHHHHHHHHH----Hcch----HHHHHHHHHHHHHH
Confidence 344566778889999999999999999766788999999999887665554322 1111 22333556788899
Q ss_pred HHHHHcccCChHHHHHHHHHHHHHHHH
Q 027394 152 WLRVSQQLHTIGQVVVGAAVGSTFSLL 178 (224)
Q Consensus 152 ~SRiyLGvH~~sDVl~G~llG~~~a~i 178 (224)
+||+|+|+|||+||++|+++|.+++.+
T Consensus 78 ~sRv~~g~H~~sDV~~G~~lG~~~~~~ 104 (106)
T cd03394 78 ASRVVANRHWLSDVLAGAAIGILVGYL 104 (106)
T ss_pred HHHHhcCCcCHHHHHHHHHHHHHheee
Confidence 999999999999999999999887643
No 19
>PLN02250 lipid phosphate phosphatase
Probab=99.88 E-value=2.9e-21 Score=173.06 Aligned_cols=109 Identities=21% Similarity=0.258 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCCCCC-------------------C--------CCCCCCCChHHHHHHHHHHHHHHH
Q 027394 73 WATMGSVINSALAMVLKRILNQERPVPT-------------------L--------KSDPGMPSSHAQSIFFIGGFIILS 125 (224)
Q Consensus 73 ~~~~~~~~~~~~~~ilK~~v~rpRP~~~-------------------~--------~~~~sFPSgHa~~~~~~av~~~l~ 125 (224)
.++.+..++.+++.++|..++||||+-. | ++..||||||++.+++..+|++++
T Consensus 102 ~ll~sv~~t~lit~~lK~~vGRpRPdfl~rC~P~~~~~~~~~~~~~~Ctg~~~~l~dg~~SFPSGHSS~afa~~~fLsly 181 (314)
T PLN02250 102 GLLFSVLITGVITDAIKDAVGRPRPDFFWRCFPDGKGVFHPVTTDVLCTGAKSVIKEGHKSFPSGHTSWSFAGLGFLSLY 181 (314)
T ss_pred HHHHHHHHHHHHHHHHHhhhCCCCCChhhhcCccccccccccccceeecCCcccccccCCCCCchhHHHHHHHHHHHHHH
Confidence 3456677888999999999999999841 1 234899999999999989988887
Q ss_pred HHHHhh-----hhhHHHHHHHHHHHHHHHHHHHHHHcccCChHHHHHHHHHHHHHHHHHHH
Q 027394 126 IVEWLG-----INEASLMISGFTLAIGSYLSWLRVSQQLHTIGQVVVGAAVGSTFSLLWFF 181 (224)
Q Consensus 126 ~~~~~~-----~~~~~~~l~~~~~~~~~lv~~SRiyLGvH~~sDVl~G~llG~~~a~i~~~ 181 (224)
+..+.+ .+.+|..+..++++++.++++||+|+++|||+||++|+++|++++...|.
T Consensus 182 L~~kl~~~~~~~~~~r~~l~~lpll~A~lVa~SRI~dy~Hh~sDVlaG~lIG~~~A~~~y~ 242 (314)
T PLN02250 182 LSGKIRVFDRRGHVAKLCIVFLPLLVAALVGVSRVDDYWHHWQDVFAGALIGLTVASFCYL 242 (314)
T ss_pred HHHhhccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHH
Confidence 765433 12356667778889999999999999999999999999999998877654
No 20
>PLN02731 Putative lipid phosphate phosphatase
Probab=99.87 E-value=2.3e-21 Score=174.60 Aligned_cols=109 Identities=20% Similarity=0.258 Sum_probs=89.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCCCCC--------------------------CCCCCCCCChHHHHHHHHHHHHHHHH
Q 027394 73 WATMGSVINSALAMVLKRILNQERPVPT--------------------------LKSDPGMPSSHAQSIFFIGGFIILSI 126 (224)
Q Consensus 73 ~~~~~~~~~~~~~~ilK~~v~rpRP~~~--------------------------~~~~~sFPSgHa~~~~~~av~~~l~~ 126 (224)
.++.+..++.+++.++|..++||||+-. .++..||||||++.+++..+|+++++
T Consensus 121 gll~s~~~t~liT~ilK~~vGRpRPdfl~rC~P~~~~~~~~~~~~iCt~~~~~l~dg~~SFPSGHSS~sfagl~fLslyL 200 (333)
T PLN02731 121 GLLYSVLVTAVLTDAIKNAVGRPRPDFFWRCFPDGKALYDSLGDVICHGDKSVIREGHKSFPSGHTSWSFSGLGFLSLYL 200 (333)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCchhhcCccccccccccccceecCchhcccccCCCCCchhHHHHHHHHHHHHHHH
Confidence 3556678889999999999999999830 02346999999999999999988877
Q ss_pred HHHhhh-----hhHHHHHHHHHHHHHHHHHHHHHHcccCChHHHHHHHHHHHHHHHHHHH
Q 027394 127 VEWLGI-----NEASLMISGFTLAIGSYLSWLRVSQQLHTIGQVVVGAAVGSTFSLLWFF 181 (224)
Q Consensus 127 ~~~~~~-----~~~~~~l~~~~~~~~~lv~~SRiyLGvH~~sDVl~G~llG~~~a~i~~~ 181 (224)
..+.+. ..+|..+..+++++++++++||+|+++|||+||++|+++|++++.+.|.
T Consensus 201 ~~kl~~~~~~~~~~rl~l~~lpll~A~lIalSRV~Dy~Hh~sDVlaG~lLG~~iA~~~Y~ 260 (333)
T PLN02731 201 SGKIQAFDGKGHVAKLCIVILPLLFAALVGISRVDDYWHHWQDVFAGGLLGLAISTICYL 260 (333)
T ss_pred HHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 655421 2345667778889999999999999999999999999999999877764
No 21
>PRK09597 lipid A 1-phosphatase; Reviewed
Probab=99.85 E-value=4.1e-20 Score=154.25 Aligned_cols=109 Identities=22% Similarity=0.273 Sum_probs=77.0
Q ss_pred HHHhhhHHHH-HHHHHHHHHHHHHHHHHHhhCCCCCCC------CCCCCCCCCChHHHHHHHHHHHHHHHHHHHhhhhhH
Q 027394 63 IIWRHDSEAL-WATMGSVINSALAMVLKRILNQERPVP------TLKSDPGMPSSHAQSIFFIGGFIILSIVEWLGINEA 135 (224)
Q Consensus 63 ~~~~r~~~~~-~~~~~~~~~~~~~~ilK~~v~rpRP~~------~~~~~~sFPSgHa~~~~~~av~~~l~~~~~~~~~~~ 135 (224)
.+.+||++.. ..+.+++.+.+++..+|+.++||||.. +...++||||||++++++.+.++ .++.+.+
T Consensus 70 ~l~~~d~~g~~~l~~al~~~~ll~~~LK~~~~R~~~~~~r~~~~p~~~~~SFPSGHt~~af~~a~~l----~~~~~~~-- 143 (190)
T PRK09597 70 PLIQRDAIGLFQVANASIATTLLTHTTKRALNHVTINDQRLGERPYGGNFNMPSGHSSMVGLAVAFL----MRRYSFK-- 143 (190)
T ss_pred HHHhccHhHHHHHHHHHHHHHHHHHHHHHHhccccccccccccCCCCCCCCCCcHHHHHHHHHHHHH----HHHHchh--
Confidence 4455565554 455677888999999999999976643 23345999999999986544332 1221111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcccCChHHHHHHHHHHHHHHHHHH
Q 027394 136 SLMISGFTLAIGSYLSWLRVSQQLHTIGQVVVGAAVGSTFSLLWF 180 (224)
Q Consensus 136 ~~~l~~~~~~~~~lv~~SRiyLGvH~~sDVl~G~llG~~~a~i~~ 180 (224)
.. ...+.+++++++||+|+|+|||+||++|+++|++.+.+..
T Consensus 144 -~~--~~~l~lallVg~SRVYLGvHyPsDVLaG~liGil~~~lf~ 185 (190)
T PRK09597 144 -KY--WWLLPLIPLTMLARIYLDMHTIGAVLAGLGVGMLCVSLFT 185 (190)
T ss_pred -HH--HHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH
Confidence 11 1123466789999999999999999999999988876543
No 22
>cd03396 PAP2_like_6 PAP2_like_6 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which mainly contains bacterial proteins, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.84 E-value=2.1e-19 Score=151.27 Aligned_cols=107 Identities=18% Similarity=0.208 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCCCCC-------------------CCCCCCCCChHHHHHHHHHHHHHHHHHHHhhh
Q 027394 72 LWATMGSVINSALAMVLKRILNQERPVPT-------------------LKSDPGMPSSHAQSIFFIGGFIILSIVEWLGI 132 (224)
Q Consensus 72 ~~~~~~~~~~~~~~~ilK~~v~rpRP~~~-------------------~~~~~sFPSgHa~~~~~~av~~~l~~~~~~~~ 132 (224)
+...+.+..+..++.++|..++||||... ++.++||||||++.+++.+....+ ..+. .
T Consensus 70 ~~~~~~~~~~~~v~~~lK~~~~r~RP~~~~~~gg~~~~~~~~~~~~~~~~~~~SFPSGHas~af~~~~~~~~--~~~~-~ 146 (197)
T cd03396 70 LLLILVIGLGLLVVAILKSHWGRPRPWDLTEFGGDAPYTPLFSGPSNGCGKGCSFPSGHASAGFALLALYFL--FRRR-R 146 (197)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCChhhHHHhCCCCCCCcccccCCCCCCCCCcCCchhHHHHHHHHHHHHH--HHHh-c
Confidence 45556667778889999999999999841 246789999999988665433222 2221 1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHcccCChHHHHHHHHHHHHHHHHHHH
Q 027394 133 NEASLMISGFTLAIGSYLSWLRVSQQLHTIGQVVVGAAVGSTFSLLWFF 181 (224)
Q Consensus 133 ~~~~~~l~~~~~~~~~lv~~SRiyLGvH~~sDVl~G~llG~~~a~i~~~ 181 (224)
+.++.....+.++++.++++||+|+|+||||||++|+++|.+++.+.|.
T Consensus 147 ~~~~~~~~~~~~~~~~~vg~sRi~~G~Hf~SDvl~g~~ig~~~~~~~~~ 195 (197)
T cd03396 147 PRLARLVLAAGLALGALMGLARMARGAHFLSDVLWSLLLVWLIALLLYR 195 (197)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHH
Confidence 2234444455677889999999999999999999999999998887664
No 23
>smart00014 acidPPc Acid phosphatase homologues.
Probab=99.81 E-value=6.2e-19 Score=135.70 Aligned_cols=98 Identities=20% Similarity=0.289 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHHHhhCCCCCCC--------------CCCCCCCCCChHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHH
Q 027394 77 GSVINSALAMVLKRILNQERPVP--------------TLKSDPGMPSSHAQSIFFIGGFIILSIVEWLGINEASLMISGF 142 (224)
Q Consensus 77 ~~~~~~~~~~ilK~~v~rpRP~~--------------~~~~~~sFPSgHa~~~~~~av~~~l~~~~~~~~~~~~~~l~~~ 142 (224)
+...+..++.++|..++||||+. ..+.++||||+|++.+++.+.++.....++.+ +......
T Consensus 3 ~~~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~~~~~~~sfPSgHa~~~~~~~~~l~~~~~~~~~----~~~~~~~ 78 (116)
T smart00014 3 LAVVSLLFTGVIKNYFGRPRPFFLDIGDACCTPNFLLTLEAGYSFPSGHTAFAFAFALFLLLYLPARAA----RKLLIIL 78 (116)
T ss_pred HHHHHHHHHHHHHHHhCCCCcCcccccccccCcchhhhcCCCCCcChHHHHHHHHHHHHHHHHHHHHhh----hHHHHHH
Confidence 45678899999999999999952 13577999999999987777766554443221 2233455
Q ss_pred HHHHHHHHHHHHHHcccCChHHHHHHHHHHHHHHHH
Q 027394 143 TLAIGSYLSWLRVSQQLHTIGQVVVGAAVGSTFSLL 178 (224)
Q Consensus 143 ~~~~~~lv~~SRiyLGvH~~sDVl~G~llG~~~a~i 178 (224)
...++..+++||+|+|.||++||++|+.+|..++..
T Consensus 79 ~~~~~~~~~~sRi~~g~H~~~Dv~~G~~lG~~v~~~ 114 (116)
T smart00014 79 LLLLALVVGFSRVYLGAHWPSDVLAGSLLGILIAAV 114 (116)
T ss_pred HHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHH
Confidence 778899999999999999999999999999887754
No 24
>COG0671 PgpB Membrane-associated phospholipid phosphatase [Lipid metabolism]
Probab=99.80 E-value=4e-18 Score=140.58 Aligned_cols=114 Identities=21% Similarity=0.218 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHHHHHHHHH--hhCCCCCCCCC-----CCCCCCCChHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 027394 71 ALWATMGSVINSALAMVLKR--ILNQERPVPTL-----KSDPGMPSSHAQSIFFIGGFIILSIVEWLGINEASLMISGFT 143 (224)
Q Consensus 71 ~~~~~~~~~~~~~~~~ilK~--~v~rpRP~~~~-----~~~~sFPSgHa~~~~~~av~~~l~~~~~~~~~~~~~~l~~~~ 143 (224)
..............+..+|. .+.+|||.... ..++||||||++.+++.+.++......+.... .++......
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sfPSgHt~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~ 171 (232)
T COG0671 93 ALKLLVGLPRPLIVLSALKTWHIFARPRPGLLVALVLGASGYSFPSGHAAGAAAAALLLALLLPLRRALL-RRVLLLILL 171 (232)
T ss_pred HHHHHHHhHHHHHHHHHHhccccccCCCCcchhccccCcccCCCCChhHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHH
Confidence 34445556667778888887 89999997532 58899999999988776776665554332222 445566778
Q ss_pred HHHHHHHHHHHHHcccCChHHHHHHHHHHHHHHHHHHHHHHH
Q 027394 144 LAIGSYLSWLRVSQQLHTIGQVVVGAAVGSTFSLLWFFSWKS 185 (224)
Q Consensus 144 ~~~~~lv~~SRiyLGvH~~sDVl~G~llG~~~a~i~~~l~~~ 185 (224)
..++.++++||+|+|+|||+||++|.++|...+..+...+..
T Consensus 172 ~~~~~lv~~SRv~lGvH~~~DVi~G~~~g~~~~~~~~~~~~~ 213 (232)
T COG0671 172 LLLAALVGLSRVYLGVHYPSDVIGGALLGALAALLLLLLLRP 213 (232)
T ss_pred HHHHHHHHHHHHhcccccchHHHhhHHHHHHHHHHHHHHHhc
Confidence 889999999999999999999999999999998887776654
No 25
>cd01610 PAP2_like PAP2_like proteins, a super-family of histidine phosphatases and vanadium haloperoxidases, includes type 2 phosphatidic acid phosphatase or lipid phosphate phosphatase (LPP), Glucose-6-phosphatase, Phosphatidylglycerophosphatase B and bacterial acid phosphatase, vanadium chloroperoxidases, vanadium bromoperoxidases, and several other mostly uncharacterized subfamilies. Several members of this superfamily have been predicted to be transmembrane proteins.
Probab=99.77 E-value=2.1e-17 Score=125.58 Aligned_cols=100 Identities=25% Similarity=0.324 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCCCC------------CCCCCCCCChHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHH
Q 027394 75 TMGSVINSALAMVLKRILNQERPVPT------------LKSDPGMPSSHAQSIFFIGGFIILSIVEWLGINEASLMISGF 142 (224)
Q Consensus 75 ~~~~~~~~~~~~ilK~~v~rpRP~~~------------~~~~~sFPSgHa~~~~~~av~~~l~~~~~~~~~~~~~~l~~~ 142 (224)
.+....+..++..+|..+.||||... ++.++||||+|++.++..+.++.....+.. .+......
T Consensus 9 ~~~~~~~~~~~~~~k~~~~~~rP~~~~~~~~~~~~~~~~~~~~sfPSgH~~~~~~~~~~l~~~~~~~~----~~~~~~~~ 84 (122)
T cd01610 9 LLALLAGLLLTGVLKYLFGRPRPYFLLRCGPDGDPLLLTEGGYSFPSGHAAFAFALALFLALLLPRRL----LRLLLGLL 84 (122)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCChHHhcCCccchhhhcCCCCCCCcHHHHHHHHHHHHHHHHHHHHH----HHHHHHHH
Confidence 33444555678999999999999952 356799999999998766665544432211 12244556
Q ss_pred HHHHHHHHHHHHHHcccCChHHHHHHHHHHHHHHHH
Q 027394 143 TLAIGSYLSWLRVSQQLHTIGQVVVGAAVGSTFSLL 178 (224)
Q Consensus 143 ~~~~~~lv~~SRiyLGvH~~sDVl~G~llG~~~a~i 178 (224)
...++..+++||+|+|.||++|+++|.++|..++..
T Consensus 85 ~~~~~~~~~~sri~~g~H~~~Dv~~G~~lg~~~~~~ 120 (122)
T cd01610 85 LLLLALLVGLSRVYLGVHYPSDVLAGALLGILVALL 120 (122)
T ss_pred HHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHH
Confidence 778999999999999999999999999999887654
No 26
>KOG3030 consensus Lipid phosphate phosphatase and related enzymes of the PAP2 family [Lipid transport and metabolism]
Probab=99.75 E-value=8.3e-17 Score=144.34 Aligned_cols=112 Identities=19% Similarity=0.224 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCCCC-----C-------------------CC---------CCCCCCChHHHHHHHH
Q 027394 72 LWATMGSVINSALAMVLKRILNQERPVP-----T-------------------LK---------SDPGMPSSHAQSIFFI 118 (224)
Q Consensus 72 ~~~~~~~~~~~~~~~ilK~~v~rpRP~~-----~-------------------~~---------~~~sFPSgHa~~~~~~ 118 (224)
..++.|.+++.+++.++|..++|+||+- | |. ...||||||++.+++.
T Consensus 113 ~~~lfgl~~t~~~t~~~K~~vGRlRP~Fl~vC~P~~~~~~~~~~~~~yi~~~~Ctg~~~~~i~e~rkSFPSGHsS~s~y~ 192 (317)
T KOG3030|consen 113 GVFLFGLAATQLFTDIIKLAVGRLRPHFLDVCQPDGTDGSTCSDSNLYIEDFICTGPDPDVVREGRKSFPSGHSSFSFYA 192 (317)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCeeccccCCccCCCCCcccccccccceeCCCCHHHHHHHHcCCCCccHHHHHHH
Confidence 4667888999999999999999999992 1 11 2279999999999999
Q ss_pred HHHHHHHHHHHhh----hhhHHHHHHHHHHHHHHHHHHHHHHcccCChHHHHHHHHHHHHHHHHHHHHH
Q 027394 119 GGFIILSIVEWLG----INEASLMISGFTLAIGSYLSWLRVSQQLHTIGQVVVGAAVGSTFSLLWFFSW 183 (224)
Q Consensus 119 av~~~l~~~~~~~----~~~~~~~l~~~~~~~~~lv~~SRiyLGvH~~sDVl~G~llG~~~a~i~~~l~ 183 (224)
++|+++++..+.. .+.+|..+...+++++.++|+||+-...|+++||++|+++|+.+|...+...
T Consensus 193 ~~flalyl~~~~~~~~~~rllr~~l~f~~l~~A~~v~lSRV~DYkHHwsDV~aG~liG~~~A~~~~~~v 261 (317)
T KOG3030|consen 193 MGFLALYLQARLFWFGRGRLLRPLLQFLPLMLALLVGLSRVSDYKHHWSDVLAGALIGAFVAYFLYRYV 261 (317)
T ss_pred HHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHeeehhcccccccHHHHHHHHHHHHHHHHHHhhh
Confidence 9999988876643 3456888899999999999999999999999999999999999988766533
No 27
>PF01569 PAP2: PAP2 superfamily This family includes the following Prosite family; InterPro: IPR000326 This entry represents type 2 phosphatidic acid phosphatase (PAP2; 3.1.3.4 from EC) enzymes, such as phosphatidylglycerophosphatase B 3.1.3.27 from EC from Escherichia coli. PAP2 enzymes have a core structure consisting of a 5-helical bundle, where the beginning of the third helix binds the cofactor []. PAP2 enzymes catalyse the dephosphorylation of phosphatidate, yielding diacylglycerol and inorganic phosphate []. In eukaryotic cells, PAP activity has a central role in the synthesis of phospholipids and triacylglycerol through its product diacylglycerol, and it also generates and/or degrades lipid-signalling molecules that are related to phosphatidate. Other related enzymes have a similar core structure, including haloperoxidases such as bromoperoxidase (contains one core bundle, but forms a dimer), chloroperoxidases (contains two core bundles arranged as in other family dimers), bacitracin transport permease from Bacillus licheniformis, glucose-6-phosphatase from rat. The vanadium-dependent haloperoxidases exclusively catalyse the oxidation of halides, and act as histidine phosphatases, using histidine for the nucleophilic attack in the first step of the reaction []. Amino acid residues involved in binding phosphate/vanadate are conserved between the two families, supporting a proposal that vanadium passes through a tetrahedral intermediate during the reaction mechanism.; GO: 0003824 catalytic activity, 0016020 membrane; PDB: 1QI9_B 1IW8_A 1EOI_A 1D2T_A 1QHB_D 1UP8_C 2IPB_A 1VNS_A 1VNF_A 1VNE_A ....
Probab=99.74 E-value=2.1e-18 Score=133.53 Aligned_cols=109 Identities=18% Similarity=0.228 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCCCCC--------C-----CCCCCCCChHHHHHHHHHHHHHHHHHHHhhhhhHHHH
Q 027394 72 LWATMGSVINSALAMVLKRILNQERPVPT--------L-----KSDPGMPSSHAQSIFFIGGFIILSIVEWLGINEASLM 138 (224)
Q Consensus 72 ~~~~~~~~~~~~~~~ilK~~v~rpRP~~~--------~-----~~~~sFPSgHa~~~~~~av~~~l~~~~~~~~~~~~~~ 138 (224)
+.++.+++.+..++.++|..++||||... . ..++||||+|++.++..+.++......+. ..+..
T Consensus 3 ~~~~~~~~~~~~~~~~lk~~~~~~rP~~~~~~~~~~~~~~~~~~~~~sfPSgH~~~~~~~~~~l~~~~~~~~---~~~~~ 79 (129)
T PF01569_consen 3 LALLFALILAAILNNVLKWIFGRPRPFFYIPNYGLYPQHWPFQSPFNSFPSGHAAIAAAFAFFLAYYLGSRG---WIRIL 79 (129)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHTB--HHHHHHHHHCHHTCHHCHTTS-SSS-HHHHHHHHHHHHHHHHCCCCH---HHSEE
T ss_pred cccccchhhhHHHHHHHHHhhCCCCcCcccccCcccccCccccCCCCcCcchhhhhHHHHHhhhhhhhhccc---cccch
Confidence 34556677788889999999999999841 1 12579999999988766665543322111 00012
Q ss_pred HHHHHHHHHHHHHHHHHHcccCChHHHHHHHHHHHHHHHHHHHHH
Q 027394 139 ISGFTLAIGSYLSWLRVSQQLHTIGQVVVGAAVGSTFSLLWFFSW 183 (224)
Q Consensus 139 l~~~~~~~~~lv~~SRiyLGvH~~sDVl~G~llG~~~a~i~~~l~ 183 (224)
.......++..++++|+|+|.||++|+++|.++|..++.++...+
T Consensus 80 ~~~~~~~~~~~v~~srv~~g~H~~~Dvi~G~~lg~~~~~~~~~~~ 124 (129)
T PF01569_consen 80 LFLLAIVLAFLVALSRVYLGAHFFSDVIAGILLGILIAYLFYRVY 124 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHHHHHHHHCCHC
T ss_pred hhHHHHHHHHHhhcCEEEcCeEehHHHHHHHHHHHHHHHHHHHHh
Confidence 344567888999999999999999999999999988877665444
No 28
>cd03380 PAP2_like_1 PAP2_like_1 proteins, a sub-family of PAP2, containing bacterial acid phosphatase, vanadium chloroperoxidases and vanadium bromoperoxidases.
Probab=99.67 E-value=1.2e-15 Score=129.51 Aligned_cols=90 Identities=20% Similarity=0.088 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHHhhCCCCCCCC--------------CCCCCCCCChHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 027394 78 SVINSALAMVLKRILNQERPVPT--------------LKSDPGMPSSHAQSIFFIGGFIILSIVEWLGINEASLMISGFT 143 (224)
Q Consensus 78 ~~~~~~~~~ilK~~v~rpRP~~~--------------~~~~~sFPSgHa~~~~~~av~~~l~~~~~~~~~~~~~~l~~~~ 143 (224)
+.-..+++..+|..++|+||+.. .+..+||||||++.+++.+..+..++.++. ..+
T Consensus 102 ~~da~~~~~~~K~~~~r~RP~~~~~~~~~~~~~~~~~~~~~~SfPSGHa~~a~a~a~~l~~~~~~~~----------~~~ 171 (209)
T cd03380 102 LTDAGIATWDAKYHYNRPRPFVAIRLQWLPICTPEEGTPKHPSYPSGHATFGGAAALVLAELFPERA----------AEL 171 (209)
T ss_pred HHHHHHHHHHHHHHHCCCCchhhhccCCCcccCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHH----------HHH
Confidence 33445668999999999999952 245699999999998777766654443221 123
Q ss_pred HHHHHHHHHHHHHcccCChHHHHHHHHHHHHHHH
Q 027394 144 LAIGSYLSWLRVSQQLHTIGQVVVGAAVGSTFSL 177 (224)
Q Consensus 144 ~~~~~lv~~SRiyLGvH~~sDVl~G~llG~~~a~ 177 (224)
..++..+++||+|+|+||++||++|..+|..++.
T Consensus 172 ~~~a~~~~~SRv~~G~H~~sDv~aG~~lG~~i~~ 205 (209)
T cd03380 172 LARAAEAGNSRVVAGVHWPSDVEAGRILGEAIAA 205 (209)
T ss_pred HHHHHHHHHHhhhCCeecHHHHHHHHHHHHHHHH
Confidence 4678889999999999999999999999988764
No 29
>KOG4268 consensus Uncharacterized conserved protein containing PAP2 domain [Function unknown]
Probab=99.66 E-value=1.8e-15 Score=121.86 Aligned_cols=129 Identities=16% Similarity=0.215 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhh--HH--HHHHHHHHHHHHHHHHHHHHhhCCCCCCCCC--------CCCCCCCChHH
Q 027394 45 STINRLSKWLVSGLFSVVIIWRHD--SE--ALWATMGSVINSALAMVLKRILNQERPVPTL--------KSDPGMPSSHA 112 (224)
Q Consensus 45 ~~l~~~~~~~~~~~~~~~~~~~r~--~~--~~~~~~~~~~~~~~~~ilK~~v~rpRP~~~~--------~~~~sFPSgHa 112 (224)
.......||+.....+. +.++-. .+ ...+++|+..+.+...++|.+++|.||.... .+-|||||||+
T Consensus 37 ~~~~hg~pwf~fg~i~~-l~k~~s~~~q~~Lv~llLgLlfDli~vaivk~~f~R~rP~~t~pS~l~~~t~DiYsFPsGHa 115 (189)
T KOG4268|consen 37 GITGHGIPWFGFGTILC-LVKSSSLAGQEVLVNLLLGLLFDLITVAIVKKLFKRRRPYETSPSLLDYLTMDIYSFPSGHA 115 (189)
T ss_pred HHhhccCchhhcchhhH-hhhhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCHHHHHHHhhhhhcCCCcch
Confidence 34456677877322221 122211 12 2456788899999999999999999999642 36699999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHcccCChHHHHHHHHHHHHHHHHHH
Q 027394 113 QSIFFIGGFIILSIVEWLGINEASLMISGFTLAIGSYLSWLRVSQQLHTIGQVVVGAAVGSTFSLLWF 180 (224)
Q Consensus 113 ~~~~~~av~~~l~~~~~~~~~~~~~~l~~~~~~~~~lv~~SRiyLGvH~~sDVl~G~llG~~~a~i~~ 180 (224)
+-++..+-+..--... .-+ .....+..|+..+|+||+-+|+||.+||++|+.+|.+=+-...
T Consensus 116 SRaamv~~~~l~~a~~--a~P----lyv~l~~~walvvglSRv~lGRHyvtDVlaG~fiGylearl~l 177 (189)
T KOG4268|consen 116 SRAAMVSKFFLSHAVL--AVP----LYVLLLVLWALVVGLSRVMLGRHYVTDVLAGFFIGYLEARLVL 177 (189)
T ss_pred HHHHHHHHHHHHHHHh--ccc----hhHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9876554433211110 001 1233477899999999999999999999999999987665443
No 30
>cd03397 PAP2_acid_phosphatase PAP2, bacterial acid phosphatase or class A non-specific acid phosphatases. These enzymes catalyze phosphomonoester hydrolysis, with optimal activity in low pH conditions. They are secreted into the periplasmic space, and their physiological role remains to be determined.
Probab=99.66 E-value=2.3e-15 Score=130.08 Aligned_cols=84 Identities=21% Similarity=0.205 Sum_probs=65.0
Q ss_pred HHHHHHHhhCCCCCCCC-------------CCCCCCCCChHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH
Q 027394 84 LAMVLKRILNQERPVPT-------------LKSDPGMPSSHAQSIFFIGGFIILSIVEWLGINEASLMISGFTLAIGSYL 150 (224)
Q Consensus 84 ~~~ilK~~v~rpRP~~~-------------~~~~~sFPSgHa~~~~~~av~~~l~~~~~~~~~~~~~~l~~~~~~~~~lv 150 (224)
.+..+|..++|+||+.. .+.++||||||++.++..+..+..++.++. ..++.++..+
T Consensus 116 ~~~~~K~~~~r~RP~~~~~~~~~~~~~~~~~~~~~SfPSGHa~~a~a~a~~La~~~p~~~----------~~l~~~a~~~ 185 (232)
T cd03397 116 ATYPAKKYYNRPRPFVLNDEPICTPPDESGLAKDGSYPSGHTAAGYAWALILAELVPERA----------DEILARGSEY 185 (232)
T ss_pred HHHHHHhhhCCCCCCccCCCCcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHH
Confidence 37889999999999852 235799999999998776665554433221 0134567789
Q ss_pred HHHHHHcccCChHHHHHHHHHHHHHHH
Q 027394 151 SWLRVSQQLHTIGQVVVGAAVGSTFSL 177 (224)
Q Consensus 151 ~~SRiyLGvH~~sDVl~G~llG~~~a~ 177 (224)
|.||+|+|+|||+||++|.++|..+..
T Consensus 186 g~SRv~~GvH~psDV~aG~~lG~~~~a 212 (232)
T cd03397 186 GQSRIVCGVHWPSDVMGGRIMAAALVA 212 (232)
T ss_pred HHHHHhcCCcCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999987644
No 31
>KOG2822 consensus Sphingoid base-phosphate phosphatase [Lipid transport and metabolism]
Probab=99.64 E-value=2.3e-15 Score=135.76 Aligned_cols=134 Identities=16% Similarity=0.155 Sum_probs=94.8
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCC----------CCCCCCCChHHHHHHHHHHHHHHHHHHHhhhhh--HHHHHHHHHHHH
Q 027394 79 VINSALAMVLKRILNQERPVPTL----------KSDPGMPSSHAQSIFFIGGFIILSIVEWLGINE--ASLMISGFTLAI 146 (224)
Q Consensus 79 ~~~~~~~~ilK~~v~rpRP~~~~----------~~~~sFPSgHa~~~~~~av~~~l~~~~~~~~~~--~~~~l~~~~~~~ 146 (224)
+.+.-+++.+|..++-|||..|. ..+|||||+|+++++++..++. +.....+.-+ .+.....+.+++
T Consensus 121 ~~~~Ylggc~KD~~~lPRP~sPPvvrltls~~~~~EYG~PStHt~natais~~~~-~~ls~~d~~s~p~~~lgl~lv~~y 199 (407)
T KOG2822|consen 121 VLVMYLGGCIKDYWCLPRPSSPPVVRLTLSEDTTKEYGMPSTHTMNATAISFYFF-LVLSTMDRESYPIQYLGLSLVLLY 199 (407)
T ss_pred HHHHHHhhhhhheeecCCCCCCCeEEEEeccchhhhhCCCcchhhhhhHHHHHHH-HHHHHhchhhhHHHHHHHHHHHHH
Confidence 34567888999999999999752 4679999999999988887752 2222222111 123344456678
Q ss_pred HHHHHHHHHHcccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHH
Q 027394 147 GSYLSWLRVSQQLHTIGQVVVGAAVGSTFSLLWFFSWKSIVLEAFNSNLSIQIIVALAAAAFCVGFVLYV 216 (224)
Q Consensus 147 ~~lv~~SRiyLGvH~~sDVl~G~llG~~~a~i~~~l~~~~~~~~~~~s~~~~~~v~~~~~~~~~~~~~~~ 216 (224)
..+++++|+|.|+|..-||++|.++|+++..+++..... .+.|..+.+... ++.-+.++.++|.-.+
T Consensus 200 ~~lv~lgRiY~GMHgvlDi~sG~ligvl~~~~~~~~~~~--~dnf~~s~~~fP-~~sv~l~lfllf~hp~ 266 (407)
T KOG2822|consen 200 YALVCLGRIYCGMHGVLDIVSGLLIGVLILILRYPFVDF--IDNFISSSQWFP-LFSVVLGLFLLFFHPT 266 (407)
T ss_pred HHHHHHHHHHhcchHHHHHHhhhHHHHHHhhhhhhHHHh--ccchhhcCcccc-HHHHHHHHHHhccCCC
Confidence 889999999999999999999999999999988887765 456666654333 2223355555554333
No 32
>cd03398 PAP2_haloperoxidase PAP2, haloperoxidase_like subfamily. Haloperoxidases catalyze the oxidation of halides such as bromide or chloride by hydrogen peroxide, which results in subsequent halogenation of organic substrates, or halide-assisted disproportionation of hydrogen peroxide forming dioxygen. They are likely to participate in the biosynthesis of halogenated natural products, such as volatile halogenated hydrocarbons, chiral halogenated terpenes, acetogenins and indoles.
Probab=99.53 E-value=6.7e-14 Score=120.80 Aligned_cols=100 Identities=17% Similarity=0.057 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHhhCCCCCCCC-----------------------CCCCCCCCChHHHHHHHHHHHHHHHHHHHhhhhh-
Q 027394 79 VINSALAMVLKRILNQERPVPT-----------------------LKSDPGMPSSHAQSIFFIGGFIILSIVEWLGINE- 134 (224)
Q Consensus 79 ~~~~~~~~ilK~~v~rpRP~~~-----------------------~~~~~sFPSgHa~~~~~~av~~~l~~~~~~~~~~- 134 (224)
.-+.++++..|..++|+||+.. .+..+||||||++.+++++..+..++.+......
T Consensus 96 ~da~ia~~~~K~~~~r~RP~~~~~~~~~~~~~~~~~~~~w~p~~~~p~~psyPSGHa~~a~a~a~vL~~~~~~~~~~~~~ 175 (232)
T cd03398 96 TDAGIAAWDAKYHYRRWRPVTAIRLADTDGNPATEADPYWLPLAGTPPHPSYPSGHATFAGAAATVLKALFGSDKVPDTV 175 (232)
T ss_pred HHHHHHHHHHHhhcCccCHHHHHHhhcccCCCCCCCCCcccccCCCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCCCCc
Confidence 3444678899999999999841 2457999999999987777666544332110000
Q ss_pred ----------HHHHHHHHHHHHHHHHHHHHHHcccCChHHHHHHHHHHHHHHHH
Q 027394 135 ----------ASLMISGFTLAIGSYLSWLRVSQQLHTIGQVVVGAAVGSTFSLL 178 (224)
Q Consensus 135 ----------~~~~l~~~~~~~~~lv~~SRiyLGvH~~sDVl~G~llG~~~a~i 178 (224)
........+..++..+++||+|+|+||++|+++|..+|..++..
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~SRvy~GvH~~sDv~~G~~lG~~va~~ 229 (232)
T cd03398 176 SEPDEGGPSTGVTRVWAELNELADEVAISRVYAGVHFRSDDAAGAALGEQIGAA 229 (232)
T ss_pred cccccCCCCCCCcccHhHHHHHHHHHHHHHHhccccChHHHHHHHHHHHHHHHH
Confidence 00001223446778899999999999999999999999887754
No 33
>cd03386 PAP2_Aur1_like PAP2_like proteins, Aur1_like subfamily. Yeast Aur1p or Ipc1p is necessary for the addition of inositol phosphate to ceramide, an essential step in yeast sphingolipid synthesis, and is the target of several antifungal compounds such as aureobasidin.
Probab=99.36 E-value=6.5e-11 Score=98.75 Aligned_cols=65 Identities=12% Similarity=0.014 Sum_probs=47.5
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHcccCChHHHHHHHHHHHHHH
Q 027394 103 SDPGMPSSHAQSIFFIGGFIILSIVEWLGINEASLMISGFTLAIGSYLSWLRVSQQLHTIGQVVVGAAVGSTFS 176 (224)
Q Consensus 103 ~~~sFPSgHa~~~~~~av~~~l~~~~~~~~~~~~~~l~~~~~~~~~lv~~SRiyLGvH~~sDVl~G~llG~~~a 176 (224)
...+|||+|++.++..+..+. ++. + .....+..++++++++||+|+|.||+.||++|.++|.+..
T Consensus 115 ~~~~fPS~H~~~a~~~~~~~~----~~~--~---~~~~~~~~~~~~~i~~s~v~~~~H~~~Dv~~G~~l~~~~~ 179 (186)
T cd03386 115 PFNAFPSLHVAWAVLAALFLW----RHR--R---RLLRWLAVLWPLLIWLSTLYLGNHYFIDLVGGIALALLSF 179 (186)
T ss_pred CcceeCcHHHHHHHHHHHHHH----HHH--H---HHHHHHHHHHHHHHHHHHHHHCCccHHHHHHHHHHHHHHH
Confidence 347899999998755444332 111 1 1233456678889999999999999999999999997543
No 34
>PF14378 PAP2_3: PAP2 superfamily
Probab=98.22 E-value=6.1e-05 Score=62.80 Aligned_cols=62 Identities=19% Similarity=0.204 Sum_probs=43.9
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHcccCChHHHHHHHHHHHHH
Q 027394 106 GMPSSHAQSIFFIGGFIILSIVEWLGINEASLMISGFTLAIGSYLSWLRVSQQLHTIGQVVVGAAVGSTF 175 (224)
Q Consensus 106 sFPSgHa~~~~~~av~~~l~~~~~~~~~~~~~~l~~~~~~~~~lv~~SRiyLGvH~~sDVl~G~llG~~~ 175 (224)
.|||.|+..+...+.. ..+ .+.+ .+...+..++..++.+|=+++|.||.-|+++|.+++.+.
T Consensus 127 afPSlH~a~a~l~~~~----~~~-~~~~---~~~~~~~~~~~~~i~~stv~~~~HY~iDv~aG~~la~~~ 188 (191)
T PF14378_consen 127 AFPSLHVAWAVLCALA----LWR-VGRP---RWLRALFLAFNVLILFSTVYTGQHYVIDVIAGAALALLA 188 (191)
T ss_pred ccCchHHHHHHHHHHH----HHH-cccc---HHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 5999999876433322 222 1211 123335667888999999999999999999999998653
No 35
>PF02681 DUF212: Divergent PAP2 family; InterPro: IPR003832 This family is related to the acid phosphatase/vanadium-dependent haloperoxidases; members of this group are uncharacterised.
Probab=97.98 E-value=2.8e-05 Score=62.44 Aligned_cols=18 Identities=33% Similarity=0.335 Sum_probs=16.0
Q ss_pred cCChHHHHHHHHHHHHHH
Q 027394 159 LHTIGQVVVGAAVGSTFS 176 (224)
Q Consensus 159 vH~~sDVl~G~llG~~~a 176 (224)
-|+|.+|++|+++|+++|
T Consensus 124 GHtp~EV~~G~llGi~vA 141 (141)
T PF02681_consen 124 GHTPLEVFAGALLGIVVA 141 (141)
T ss_pred CCCHHHHHHHHHHHHhhC
Confidence 499999999999998764
No 36
>COG3907 PAP2 (acid phosphatase) superfamily protein [General function prediction only]
Probab=97.83 E-value=0.00088 Score=56.75 Aligned_cols=137 Identities=18% Similarity=0.211 Sum_probs=82.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHH----HhhhHH-----HHHHHHHHHHHHHHHHHHHHhhCCCCCCC--------------
Q 027394 43 LESTINRLSKWLVSGLFSVVII----WRHDSE-----ALWATMGSVINSALAMVLKRILNQERPVP-------------- 99 (224)
Q Consensus 43 ~~~~l~~~~~~~~~~~~~~~~~----~~r~~~-----~~~~~~~~~~~~~~~~ilK~~v~rpRP~~-------------- 99 (224)
.+..+-...+|..++.-+..+. ++|..+ ..+.+.+++.+..+..++|..-...=|-+
T Consensus 72 le~l~Hr~~K~l~Ia~~~~~Ll~~gv~~R~gra~~r~~ayvf~~~~L~~s~i~~lKalta~~CPWdLv~yGG~~~~~~L~ 151 (249)
T COG3907 72 LEYLIHRVGKWLSIAAGLCLLLGMGVRCRGGRAGCRASAYVFVTLVLSTSLISLLKALTAMDCPWDLVRYGGGFPFIGLF 151 (249)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhheeecCcccccchhhHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHhCCCCcceEee
Confidence 3566667778887744333332 344332 34566667788888889999877665553
Q ss_pred ---C--CCCCCCCCChHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHcccCChHHHHHHHHHHHH
Q 027394 100 ---T--LKSDPGMPSSHAQSIFFIGGFIILSIVEWLGINEASLMISGFTLAIGSYLSWLRVSQQLHTIGQVVVGAAVGST 174 (224)
Q Consensus 100 ---~--~~~~~sFPSgHa~~~~~~av~~~l~~~~~~~~~~~~~~l~~~~~~~~~lv~~SRiyLGvH~~sDVl~G~llG~~ 174 (224)
| ...+.-||-|||++.++.. +++...+-..+.+++.-..+.+....++++||+-.|.|+.|.=+-...+=-+
T Consensus 152 ~~rpp~~~pGhCfPgGHASsGfa~~---aLfFa~~~~~Prla~l~l~~g~~~G~l~g~sq~lrGAHFLsHnLWs~~~~WL 228 (249)
T COG3907 152 ESRPPLKAPGHCFPGGHASSGFAWV---ALFFAAWGVCPRLAWLGLMIGLVAGLLFGISQQLRGAHFLSHNLWSLTICWL 228 (249)
T ss_pred cCCCCCCCCCCcCCCCCccccHHHH---HHHHHHcccChHHHHHHHHHHHHHHHHHhHHHHhhhhhhhcchHHHHHHHHH
Confidence 1 1345679999998764322 2222222222333333333455677889999999999999966655544444
Q ss_pred HHHHHHHH
Q 027394 175 FSLLWFFS 182 (224)
Q Consensus 175 ~a~i~~~l 182 (224)
++...|++
T Consensus 229 v~Lg~f~l 236 (249)
T COG3907 229 VALGFFYL 236 (249)
T ss_pred HHHHHHHH
Confidence 44444433
No 37
>COG1963 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.81 E-value=0.00044 Score=55.49 Aligned_cols=97 Identities=23% Similarity=0.305 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHhh----CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH-
Q 027394 79 VINSALAMVLKRIL----NQERPVPTLKSDPGMPSSHAQSIFFIGGFIILSIVEWLGINEASLMISGFTLAIGSYLSWL- 153 (224)
Q Consensus 79 ~~~~~~~~ilK~~v----~rpRP~~~~~~~~sFPSgHa~~~~~~av~~~l~~~~~~~~~~~~~~l~~~~~~~~~lv~~S- 153 (224)
+++.+..+.+|-.+ .|.|-....-+.-||||+|++...+.+.-+++- .|..+ .+..+...+++++.+.
T Consensus 17 l~a~~~AQvIKv~I~~~~~rk~~~~~~~sTGGMPSsHSA~VtALat~ial~----~G~dS---~lFaiA~vfaiIvm~DA 89 (153)
T COG1963 17 LVAILLAQVIKVLIELIRTRKLNVTLLFSTGGMPSSHSALVTALATSIALT----EGLDS---PLFAIAAVFAIIVMYDA 89 (153)
T ss_pred HHHHHHHHHHHHHHHHHHhccccceeeeecCCCCchHHHHHHHHHHHHHHH----hcCCC---chHHHHHHHHHHHhhhh
Confidence 33444455555544 333333334566899999998765554443321 12111 1222333444444332
Q ss_pred ---H----------------------------H-HcccCChHHHHHHHHHHHHHHHHHHHH
Q 027394 154 ---R----------------------------V-SQQLHTIGQVVVGAAVGSTFSLLWFFS 182 (224)
Q Consensus 154 ---R----------------------------i-yLGvH~~sDVl~G~llG~~~a~i~~~l 182 (224)
| + -+--|.|.+|++|.++|++.+.+.+..
T Consensus 90 ~GVRr~aG~QA~iLN~l~~~~~~e~~~~~~~~lKellGH~p~eV~~G~~lGI~i~~i~~~~ 150 (153)
T COG1963 90 TGVRRSAGVQARILNQLIEELVNEKKDFDKKRLKELLGHTPLEVFAGLLLGILIAWIFYAF 150 (153)
T ss_pred hhHHHhccchHHHHHHHHHHHHHhhccCCHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHH
Confidence 1 1 134599999999999999998876643
No 38
>PF14360 PAP2_C: PAP2 superfamily C-terminal
Probab=95.21 E-value=0.11 Score=37.11 Aligned_cols=63 Identities=16% Similarity=0.076 Sum_probs=33.1
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHcccCChHHHHHHHHHHHH
Q 027394 106 GMPSSHAQSIFFIGGFIILSIVEWLGINEASLMISGFTLAIGSYLSWLRVSQQLHTIGQVVVGAAVGST 174 (224)
Q Consensus 106 sFPSgHa~~~~~~av~~~l~~~~~~~~~~~~~~l~~~~~~~~~lv~~SRiyLGvH~~sDVl~G~llG~~ 174 (224)
=+.|||++.....+.+. .+..+.+. +....+........+..=+.-..||--||+.|..+...
T Consensus 5 liFSGHt~~~~l~~l~~----~~y~~~~~--~~~~~~~~~~~~~~~~~ii~sr~HYTvDV~~a~~it~~ 67 (74)
T PF14360_consen 5 LIFSGHTAFLTLCALFW----WEYSPRRF--WVLKVIMWLLAIIGSFLIIASRKHYTVDVVLAYYITSL 67 (74)
T ss_pred EEEchhHHHHHHHHHHH----HHHcccch--hHHHHHHHHHHHHHHHHHHHcCCCceeehhhHHHHHHH
Confidence 36799999765433322 11111111 01222233333333333344458999999999988743
No 39
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=76.74 E-value=9.9 Score=29.38 Aligned_cols=42 Identities=17% Similarity=0.171 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHH
Q 027394 163 GQVVVGAAVGSTFSLLWFFSWKSIVLEAFNSNLSIQIIVALAAAAFCVGFVL 214 (224)
Q Consensus 163 sDVl~G~llG~~~a~i~~~l~~~~~~~~~~~s~~~~~~v~~~~~~~~~~~~~ 214 (224)
+|.++|.++|+.++++ . -+.+.+++|.-|+- -.+.+|.|++.
T Consensus 50 sefIsGilVGa~iG~l----l----D~~agTsPwglIv~--lllGf~AG~ln 91 (116)
T COG5336 50 SEFISGILVGAGIGWL----L----DKFAGTSPWGLIVF--LLLGFGAGVLN 91 (116)
T ss_pred HHHHHHHHHHHHHHHH----H----HHhcCCCcHHHHHH--HHHHHHHHHHH
Confidence 6777777777665532 2 44566788876522 23677777765
No 40
>PRK02983 lysS lysyl-tRNA synthetase; Provisional
Probab=68.42 E-value=1e+02 Score=32.85 Aligned_cols=21 Identities=10% Similarity=-0.007 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHc
Q 027394 137 LMISGFTLAIGSYLSWLRVSQ 157 (224)
Q Consensus 137 ~~l~~~~~~~~~lv~~SRiyL 157 (224)
|++..++.+..++....+.-.
T Consensus 78 w~~~~~~~~~~~~~~l~~~l~ 98 (1094)
T PRK02983 78 WWVLLAYLVLAALLNVALLAL 98 (1094)
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 344444444444555555444
No 41
>PF10261 Scs3p: Inositol phospholipid synthesis and fat-storage-inducing TM; InterPro: IPR019388 This entry represents the fat storage-inducing transmembrane (FIT) family of proteins, which play an important role in lipid droplet accumulation. They are endoplasmic reticulum resident membrane proteins that induce lipid droplet accumulation in cell culture and when expressed in mouse liver []; they mediate the partitioning of triglyceride from the ER into cytosolic fatty droplets by an as-yet undetermined mechanism. The FIT family of proteins are not involved in triglyceride biosynthesis []. FIT1 and FIT2 proteins are six-transmembrane-domain containing proteins with both the N and C termini residing in the cytosol. FIT2 is the more anciently conserved homologue of the FIT family; this family of proteins do not share sequence similarity to known proteins or domains.
Probab=67.05 E-value=24 Score=30.57 Aligned_cols=30 Identities=20% Similarity=0.020 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHcccCChHHHHHHHHHHHHHHH
Q 027394 146 IGSYLSWLRVSQQLHTIGQVVVGAAVGSTFSL 177 (224)
Q Consensus 146 ~~~lv~~SRiyLGvH~~sDVl~G~llG~~~a~ 177 (224)
|.......=+ ..|++.+=+.|.++|.+...
T Consensus 206 W~~mll~T~i--yFHT~~EKl~Gl~~g~~~~~ 235 (238)
T PF10261_consen 206 WWWMLLMTSI--YFHTILEKLSGLLFGYLGWY 235 (238)
T ss_pred HHHHHHHHHH--HHCCHHHHHHHHHHHHHhhe
Confidence 3333344444 58999999999999976543
No 42
>PF12270 Cyt_c_ox_IV: Cytochrome c oxidase subunit IV; InterPro: IPR021050 This family of proteins is found in bacteria. Proteins in this family are approximately 140 amino acids in length. This family is the fourth subunit of the cytochrome c oxidase complex. This subunit does not have a catalytic capacity but instead, is required for assembly and/or stability of the complex []. ; GO: 0004129 cytochrome-c oxidase activity, 0055114 oxidation-reduction process, 0016021 integral to membrane
Probab=50.92 E-value=1.3e+02 Score=24.15 Aligned_cols=36 Identities=25% Similarity=0.220 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHhhCCCCCCCC-------CCCCCCCCChHHHHH
Q 027394 78 SVINSALAMVLKRILNQERPVPT-------LKSDPGMPSSHAQSI 115 (224)
Q Consensus 78 ~~~~~~~~~ilK~~v~rpRP~~~-------~~~~~sFPSgHa~~~ 115 (224)
..++..+...-|+. .+||.+. ....+||.|.|+---
T Consensus 49 ~mig~yl~~~~rr~--~~rPED~~daEI~dgAGe~GfFsP~SwWP 91 (137)
T PF12270_consen 49 LMIGFYLRFTARRI--GPRPEDREDAEIADGAGELGFFSPHSWWP 91 (137)
T ss_pred HHHHHHHHHHHhhC--CCCCccccccccccCCCCcCcCCCccHhH
Confidence 34555555555555 6899863 246699999998643
No 43
>PF05940 NnrS: NnrS protein; InterPro: IPR010266 This family consists of several bacterial NnrS like proteins. NnrS is a putative haem-Cu protein (NnrS) and a member of the short-chain dehydrogenase family []. Expression of nnrS is dependent on the transcriptional regulator NnrR, which also regulates expression of genes required for the reduction of nitrite to nitrous oxide, including nirK and nor. NnrS is a haem- and copper-containing membrane protein. Genes encoding putative orthologues of NnrS are sometimes but not always found in bacteria encoding nitrite and/or nitric oxide reductase [].
Probab=46.76 E-value=1.3e+02 Score=27.84 Aligned_cols=22 Identities=23% Similarity=0.460 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh
Q 027394 199 IIVALAAAAFCVGFVLYVIKHW 220 (224)
Q Consensus 199 ~~v~~~~~~~~~~~~~~~~~~~ 220 (224)
....+++..++.+|.+|..+++
T Consensus 350 ~~l~~aa~lW~~af~l~~~~y~ 371 (379)
T PF05940_consen 350 LLLWLAAILWAAAFALWLWRYL 371 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3446789999999999999875
No 44
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=45.34 E-value=2.1e+02 Score=25.26 Aligned_cols=9 Identities=11% Similarity=0.246 Sum_probs=4.5
Q ss_pred CCChHHHHH
Q 027394 107 MPSSHAQSI 115 (224)
Q Consensus 107 FPSgHa~~~ 115 (224)
.|+.|.-.+
T Consensus 8 ~~~er~k~~ 16 (301)
T PF14362_consen 8 SPAERNKYA 16 (301)
T ss_pred ChHHHHHHH
Confidence 355555443
No 45
>COG0586 DedA Uncharacterized membrane-associated protein [Function unknown]
Probab=45.06 E-value=1.3e+02 Score=25.35 Aligned_cols=98 Identities=8% Similarity=0.032 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCChHHHHH-------HHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Q 027394 73 WATMGSVINSALAMVLKRILNQERPVPTLKSDPGMPSSHAQSI-------FFIGGFIILSIVEWLGINEASLMISGFTLA 145 (224)
Q Consensus 73 ~~~~~~~~~~~~~~ilK~~v~rpRP~~~~~~~~sFPSgHa~~~-------~~~av~~~l~~~~~~~~~~~~~~l~~~~~~ 145 (224)
...++.+++..++..+.+..+++++........ ++..+-.-+ ...+++++.++. ..| .+
T Consensus 62 ~~~lga~lGd~i~Y~iGr~~G~~~l~~~~~~~~-~~~~~l~~a~~~f~r~G~~~vf~~RFip------~vR-------t~ 127 (208)
T COG0586 62 VATLGALLGDLISYWIGRRFGRKLLRKLWSYRL-LKRKKLDKAELLFERHGLFAIFLGRFIP------GVR-------TL 127 (208)
T ss_pred HHHHHHHHHHHHHHHHHHHhcHHHHHhhhhhcc-CCHHHHHHHHHHHHHcCchhhhhhcccc------hhH-------hh
Confidence 455677888999999999999888864322111 233322222 111222221111 001 12
Q ss_pred HHHHHHHHHHHcccCChHHHHHHHHHHHHHHHHHHHHHH
Q 027394 146 IGSYLSWLRVSQQLHTIGQVVVGAAVGSTFSLLWFFSWK 184 (224)
Q Consensus 146 ~~~lv~~SRiyLGvH~~sDVl~G~llG~~~a~i~~~l~~ 184 (224)
....-|.+|+-...-..-|++++.+...++...-|.+-+
T Consensus 128 ip~~AG~~~m~~~~F~~~n~~ga~iW~~~~~~lGy~~G~ 166 (208)
T COG0586 128 VPIVAGMSKMPLRRFLLYNILGALLWALVLTLLGYLLGE 166 (208)
T ss_pred hhHhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 334456777555555566888888777776666655443
No 46
>PRK14792 lipoprotein signal peptidase; Provisional
Probab=44.77 E-value=1.7e+02 Score=23.79 Aligned_cols=17 Identities=12% Similarity=0.043 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHhhCCCC
Q 027394 80 INSALAMVLKRILNQER 96 (224)
Q Consensus 80 ~~~~~~~ilK~~v~rpR 96 (224)
...++.++.|.++.+..
T Consensus 17 ~~~~lDq~tK~~v~~~l 33 (159)
T PRK14792 17 LIVLLDQFSKYLASSQL 33 (159)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 33456677777666543
No 47
>PF05875 Ceramidase: Ceramidase; InterPro: IPR008901 This entry consists of several ceramidases. Ceramidases are enzymes involved in regulating cellular levels of ceramides, sphingoid bases, and their phosphates.; GO: 0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides, 0006672 ceramide metabolic process, 0016021 integral to membrane
Probab=41.78 E-value=2.3e+02 Score=24.45 Aligned_cols=87 Identities=11% Similarity=0.073 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHH
Q 027394 135 ASLMISGFTLAIGSYLSWLRVSQQLHTIGQVVVGAAVGSTFSLLWFFSWKSIVLEAFNSNLSIQIIVALAAAAFCVGFVL 214 (224)
Q Consensus 135 ~~~~l~~~~~~~~~lv~~SRiyLGvH~~sDVl~G~llG~~~a~i~~~l~~~~~~~~~~~s~~~~~~v~~~~~~~~~~~~~ 214 (224)
.+..+...+....+.+.+.-.+...=...|+.-|.+.-.+.....+ ...+..++ -..+...+.....+.+.+++|+.+
T Consensus 110 ~~~~~~~~L~~~~~~~t~~~~~~~~p~~~~~~f~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~l~~~~~~~f~~a~~~ 187 (262)
T PF05875_consen 110 YRLALPLLLFIYAVVVTVLYFVLDNPVFHQIAFASLVLLVILRSIY-LIRRRVRD-ACRRRRARRLLLFGLALFLVAFFF 187 (262)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHH-HHHHhcCc-hhhchHHHHHHHHHHHHHHHHHHH
Confidence 3444444444555555555555434444566555544333222222 22211111 133444556788899999999999
Q ss_pred HHHHhhhhc
Q 027394 215 YVIKHWLKD 223 (224)
Q Consensus 215 ~~~~~~~~~ 223 (224)
-.+|+.+=|
T Consensus 188 W~iD~~~C~ 196 (262)
T PF05875_consen 188 WNIDRIFCS 196 (262)
T ss_pred HHhHHHHHc
Confidence 999887643
No 48
>COG2035 Predicted membrane protein [Function unknown]
Probab=40.62 E-value=2.2e+02 Score=25.50 Aligned_cols=73 Identities=19% Similarity=0.145 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHH--HcccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhhh
Q 027394 144 LAIGSYLSWLRV--SQQLHTIGQVVVGAAVGSTFSLLWFFSWKSIVLEAFNSNLSIQIIVALAAAAFCVGFVLYVIKHWL 221 (224)
Q Consensus 144 ~~~~~lv~~SRi--yLGvH~~sDVl~G~llG~~~a~i~~~l~~~~~~~~~~~s~~~~~~v~~~~~~~~~~~~~~~~~~~~ 221 (224)
-..+.++.+||+ |+=.||.+-... .+.|.+.+.+.- .+ ++. + ..+....+..+.+.+++||.+-.+..|+
T Consensus 199 G~~~Gll~fskvi~y~L~~h~~~t~~-fi~Gl~lgSl~~-i~---p~~--~-~~~~~~~~~~~~~~f~lG~al~~~~~~~ 270 (276)
T COG2035 199 GAGAGLLTFSKVISYLLRNHREITYA-FIIGLILGSLRA-IW---PGL--A-AAINFFSLFMLVVAFILGFALVLILKKL 270 (276)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHH-HHHHHHHHHHHH-Hh---cCC--c-hhhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 345556788887 667777664433 555554444321 12 111 1 1112566788889999999888888887
Q ss_pred hcC
Q 027394 222 KDE 224 (224)
Q Consensus 222 ~~~ 224 (224)
.|+
T Consensus 271 ~~~ 273 (276)
T COG2035 271 ADK 273 (276)
T ss_pred HHh
Confidence 664
No 49
>PF04971 Lysis_S: Lysis protein S ; InterPro: IPR007054 The lysis S protein is a cytotoxic protein forming holes in membranes causing cell lysis. The action of Lysis S is independent of the proportion of acidic phospholipids in the membrane [].
Probab=39.36 E-value=78 Score=22.35 Aligned_cols=37 Identities=22% Similarity=0.190 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHH
Q 027394 168 GAAVGSTFSLLWFFSWKSIVLEAFNSNLSIQIIVALAAA 206 (224)
Q Consensus 168 G~llG~~~a~i~~~l~~~~~~~~~~~s~~~~~~v~~~~~ 206 (224)
|+.-|...+.+.+++.+- .+.+.++-|..+-|+.+.+
T Consensus 7 g~aYgtSag~~~~wl~~l--ld~~sp~qW~aIGvi~gi~ 43 (68)
T PF04971_consen 7 GAAYGTSAGSAGYWLLQL--LDQFSPSQWAAIGVIGGIF 43 (68)
T ss_pred hhccccchhhHHHHHHHH--HhccCcccchhHHHHHHHH
Confidence 333333333444443332 3445555555555544433
No 50
>PF07099 DUF1361: Protein of unknown function (DUF1361); InterPro: IPR009793 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although some members are annotated as being putative integral membrane proteins.
Probab=39.01 E-value=2e+02 Score=23.42 Aligned_cols=52 Identities=15% Similarity=0.163 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCchhH-HHHHHHHHHHHHHHHHHHHH
Q 027394 167 VGAAVGSTFSLLWFFSWKSIVLEAFNSNLSIQ-IIVALAAAAFCVGFVLYVIK 218 (224)
Q Consensus 167 ~G~llG~~~a~i~~~l~~~~~~~~~~~s~~~~-~~v~~~~~~~~~~~~~~~~~ 218 (224)
.++..|...|...+....+..++++....... .-.+...++++-|+.+|.=|
T Consensus 73 ~~~~~gll~G~~Sl~~i~~~l~~~~~~~~~~~~~~~~~~~~~~Lss~GIYlGR 125 (168)
T PF07099_consen 73 SFALFGLLLGFLSLYLILKILRRRLHRQRNGWWIWLFIILISFLSSFGIYLGR 125 (168)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 34444444445555445555555544332111 22333445555566666544
No 51
>PF13373 DUF2407_C: DUF2407 C-terminal domain
Probab=37.29 E-value=14 Score=29.55 Aligned_cols=26 Identities=19% Similarity=0.295 Sum_probs=20.3
Q ss_pred ccCChHHHHHHHHHHHHHHHHH-HHHH
Q 027394 158 QLHTIGQVVVGAAVGSTFSLLW-FFSW 183 (224)
Q Consensus 158 GvH~~sDVl~G~llG~~~a~i~-~~l~ 183 (224)
..+...|.+.|.++|..++... +++.
T Consensus 85 ~~~~~~dlL~G~liGff~g~~~~~~L~ 111 (140)
T PF13373_consen 85 NSGHNDDLLWGLLIGFFFGLFSLFWLL 111 (140)
T ss_pred ccchHHHHHHHHHHHHHHHHHhHHHHh
Confidence 4556789999999999998877 4444
No 52
>PF11045 YbjM: Putative inner membrane protein of Enterobacteriaceae; InterPro: IPR020368 This entry contains membrane proteins with no known function.; GO: 0016021 integral to membrane
Probab=37.28 E-value=1.7e+02 Score=23.12 Aligned_cols=55 Identities=20% Similarity=0.394 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHH-HHHHH-HHHhhhhc
Q 027394 164 QVVVGAAVGSTFSLLWFFSWKSIVLEAFNSNLSIQIIVALAAAAFCV-GFVLY-VIKHWLKD 223 (224)
Q Consensus 164 DVl~G~llG~~~a~i~~~l~~~~~~~~~~~s~~~~~~v~~~~~~~~~-~~~~~-~~~~~~~~ 223 (224)
-.+.|+++++.++.+...++ -.-..|.|+...=..+++.+|. |.+.| ++++++++
T Consensus 63 ~pL~GAllAap~clLl~~~~-----~~~~rs~wQelAw~~SAvFWc~lGAL~~lf~~~l~~~ 119 (125)
T PF11045_consen 63 SPLLGALLAAPVCLLLMHLW-----FAPSRSFWQELAWLFSAVFWCALGALLVLFLRSLLQR 119 (125)
T ss_pred HHHHHHHHHHHHHHHHHHHH-----HcccchHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 34555555554444332222 1234466777777778888876 44333 45666554
No 53
>KOG2290 consensus Rhomboid family proteins [Signal transduction mechanisms]
Probab=34.32 E-value=3.6e+02 Score=26.32 Aligned_cols=117 Identities=8% Similarity=-0.022 Sum_probs=53.7
Q ss_pred HHHHHHHHHHhhCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHcccC
Q 027394 81 NSALAMVLKRILNQERPVPTLKSDPGMPSSHAQSIFFIGGFIILSIVEWLGINEASLMISGFTLAIGSYLSWLRVSQQLH 160 (224)
Q Consensus 81 ~~~~~~ilK~~v~rpRP~~~~~~~~sFPSgHa~~~~~~av~~~l~~~~~~~~~~~~~~l~~~~~~~~~lv~~SRiyLGvH 160 (224)
+++...+...++--.||..- |||-- .....+++.=++-..+.=.+.|+...-++..++.+.+|+--...+.-
T Consensus 497 SGitGNLASAIFlpY~~eVg-------Pa~sQ-~Gila~l~vEl~qs~~il~~~w~a~~~Lia~~L~L~iGliPWiDN~a 568 (652)
T KOG2290|consen 497 SGITGNLASAIFLPYRAEVG-------PAGSQ-FGILACLFVELFQSWQILERPWRAFFHLIATLLVLCIGLIPWIDNWA 568 (652)
T ss_pred ccccccchheeeeccccccC-------Ccccc-cchHHHHHHHHHhhhHhhhhHHHHHHHHHHHHHHHHhccccchhhHH
Confidence 33444444455544566532 44432 22333444433322222223455544445555555556555555444
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHH
Q 027394 161 TIGQVVVGAAVGSTFSLLWFFSWKSIVLEAFNSNLSIQIIVALAAAAFCVGFV 213 (224)
Q Consensus 161 ~~sDVl~G~llG~~~a~i~~~l~~~~~~~~~~~s~~~~~~v~~~~~~~~~~~~ 213 (224)
+ +.|.+.|.+.+++.+-... +-.... -+.|.-|+++.+.++..+.
T Consensus 569 H----lfG~i~GLl~s~~~~PYi~-Fg~~d~---yrKr~~ilIs~ivf~~Lla 613 (652)
T KOG2290|consen 569 H----LFGTIFGLLTSIIFLPYID-FGDFDL---YRKRFYILISQIVFSGLLA 613 (652)
T ss_pred H----HHHHHHHHHHHHHhhcccc-ccchhh---hhhHHHHHHHHHHHHHHHH
Confidence 4 4466666666555442221 111111 1245777777777765433
No 54
>PF09583 Phageshock_PspG: Phage shock protein G (Phageshock_PspG); InterPro: IPR014318 This protein previously was designated yjbO in Escherichia coli. It is found only in genomes that have the phage shock operon (psp), but it is only rarely encoded near other psp genes. The psp regulon is upregulated in response to a number of stress conditions, including ethanol, expression of the filamentous phage secretin protein IV and other secretins and heat shock.
Probab=33.61 E-value=70 Score=22.36 Aligned_cols=27 Identities=19% Similarity=0.327 Sum_probs=17.9
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhh
Q 027394 41 SGLESTINRLSKWLVSGLFSVVIIWRH 67 (224)
Q Consensus 41 ~~~~~~l~~~~~~~~~~~~~~~~~~~r 67 (224)
.++....-.+.||++.+....|+.+++
T Consensus 38 ~Gm~~lviKLLPWLil~~~~vW~~r~~ 64 (65)
T PF09583_consen 38 GGMFGLVIKLLPWLILAAVVVWFYRAR 64 (65)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 444455556688888877777766554
No 55
>PF10011 DUF2254: Predicted membrane protein (DUF2254); InterPro: IPR018723 Members of this family of proteins comprises various hypothetical and putative membrane proteins. Their exact function, has not, as yet, been defined.
Probab=33.31 E-value=3.3e+02 Score=25.08 Aligned_cols=64 Identities=27% Similarity=0.345 Sum_probs=33.1
Q ss_pred HHHcccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhh
Q 027394 154 RVSQQLHTIGQVVVGAAVGSTFSLLWFFSWKSIVLEAFNSNLSIQIIVALAAAAFCVGFVLYVIKHW 220 (224)
Q Consensus 154 RiyLGvH~~sDVl~G~llG~~~a~i~~~l~~~~~~~~~~~s~~~~~~v~~~~~~~~~~~~~~~~~~~ 220 (224)
|.++.. ..+|..-|..+|..+-++..... +........+..-..+-+..+..|++.++|+|.|=
T Consensus 86 ~~f~~d-~~~q~vLg~Figtfvy~l~~l~~--i~~~~~~~~p~~~~~~a~~l~i~~v~~li~fI~~i 149 (371)
T PF10011_consen 86 RNFMRD-RVTQVVLGTFIGTFVYSLLVLIA--IRSGDYGSVPRLSVFIALALAILSVVLLIYFIHHI 149 (371)
T ss_pred HHHHhC-chHHHHHHHHHHHHHHHHHHHHH--ccccccccCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444554 35677777766654333222111 11111112222234455566677889999999873
No 56
>PRK14785 lipoprotein signal peptidase; Provisional
Probab=30.27 E-value=3.1e+02 Score=22.50 Aligned_cols=15 Identities=13% Similarity=-0.019 Sum_probs=9.1
Q ss_pred HHHHHHHHHHhhCCC
Q 027394 81 NSALAMVLKRILNQE 95 (224)
Q Consensus 81 ~~~~~~ilK~~v~rp 95 (224)
..++.++.|.++.+.
T Consensus 24 ~~~lDq~tK~~v~~~ 38 (171)
T PRK14785 24 VLILDQWTKWLAETK 38 (171)
T ss_pred HHHHHHHHHHHHHHh
Confidence 345677777766643
No 57
>PF11345 DUF3147: Protein of unknown function (DUF3147); InterPro: IPR021493 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=28.64 E-value=2.6e+02 Score=21.18 Aligned_cols=78 Identities=15% Similarity=0.188 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHHHHHHHcccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHH-HHHHHH
Q 027394 138 MISGFTLAIGSYLSWLRVSQQLHTIGQVVVGAAVGSTFSLLWFFSWKSIVLEAFNSNLSIQIIVALAAAAFCV-GFVLYV 216 (224)
Q Consensus 138 ~l~~~~~~~~~lv~~SRiyLGvH~~sDVl~G~llG~~~a~i~~~l~~~~~~~~~~~s~~~~~~v~~~~~~~~~-~~~~~~ 216 (224)
++..++......+.+..+.-|.+.-.++.-|++.|+.-..++........++ +..| ....+.+.+++.. .+..|.
T Consensus 30 ifAA~PaV~lasl~~~~~~~~~~~a~~~s~Ga~~G~~~~i~~~l~~~~~l~~---~~~~-~~~~~~~~~~W~v~a~~~~~ 105 (108)
T PF11345_consen 30 IFAAFPAVFLASLLILGIQHGGKQAAHFSRGAVFGMIGTIICVLVVWFLLKA---SHGW-LLSIILGLIVWFVVAVVIFF 105 (108)
T ss_pred HHHHHHHHHHHHHHHHHHhcchhhHHHHHhHhHHHHHHHHHHHHHHHHHHHh---hccH-HHHHHHHHHHHHHHHHHHHH
Confidence 3444555555556777788888889999999999977654433333222221 1122 2334555555544 444555
Q ss_pred HHh
Q 027394 217 IKH 219 (224)
Q Consensus 217 ~~~ 219 (224)
++|
T Consensus 106 ~~~ 108 (108)
T PF11345_consen 106 IVH 108 (108)
T ss_pred HhC
Confidence 443
No 58
>PRK11060 rod shape-determining protein MreD; Provisional
Probab=27.79 E-value=3e+02 Score=22.50 Aligned_cols=48 Identities=15% Similarity=0.067 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHH---HHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHH
Q 027394 163 GQVVVGAAVGSTF---SLLWFFSWKSIVLEAFNSNLSIQIIVALAAAAFCVG 211 (224)
Q Consensus 163 sDVl~G~llG~~~---a~i~~~l~~~~~~~~~~~s~~~~~~v~~~~~~~~~~ 211 (224)
-|++-|..+|.=. +.+.| +.....+|-...+.|++..++.........
T Consensus 66 ~Dvl~gs~LG~hALa~~v~ay-l~~~~~~rlr~f~l~qQal~V~~l~~i~ql 116 (162)
T PRK11060 66 WDLILGSTLGVRALAMSIIAY-LVALKFQLFRNLALWQQALVVMLLSLLMDI 116 (162)
T ss_pred HHHHCcChhHHHHHHHHHHHH-HHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 5777777777421 22222 333445666677888887666554444443
No 59
>TIGR02975 phageshock_pspG phage shock protein G. This protein previously was designated yjbO in E. coli. It is found only in genomes that have the phage shock operon (psp), but only rarely is encoded near other psp genes. The psp regulon is upregulated in response to a number of stress conditions, including ethanol, expression of the filamentous phage secretin protein IV and other secretins, and heat shock.
Probab=27.78 E-value=97 Score=21.59 Aligned_cols=27 Identities=22% Similarity=0.373 Sum_probs=16.8
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhh
Q 027394 41 SGLESTINRLSKWLVSGLFSVVIIWRH 67 (224)
Q Consensus 41 ~~~~~~l~~~~~~~~~~~~~~~~~~~r 67 (224)
.++....-.+.||++.+....|+.+++
T Consensus 37 ~Gm~~lviKLLPWLil~~v~vW~~r~~ 63 (64)
T TIGR02975 37 GGMFALMIKLLPWLILAVVVVWFIKSV 63 (64)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 344445556678888777777665543
No 60
>KOG3750 consensus Inositol phospholipid synthesis protein, Scs3p [Lipid transport and metabolism]
Probab=27.32 E-value=2.6e+02 Score=24.99 Aligned_cols=20 Identities=30% Similarity=0.295 Sum_probs=15.8
Q ss_pred HcccCChHHHHHHHHHHHHH
Q 027394 156 SQQLHTIGQVVVGAAVGSTF 175 (224)
Q Consensus 156 yLGvH~~sDVl~G~llG~~~ 175 (224)
.+..|...+=+.|.+.|.+.
T Consensus 218 viYyH~~~ekVig~l~g~l~ 237 (270)
T KOG3750|consen 218 VIYYHTLLEKVIGALTGLLT 237 (270)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34788888988899888754
No 61
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=26.22 E-value=3.8e+02 Score=22.29 Aligned_cols=35 Identities=14% Similarity=0.155 Sum_probs=16.9
Q ss_pred CcchhhHHHHHHHHhhcCCcccccchhhHHHHHHHHHH
Q 027394 17 SNIEEDVNVFEQEALVDGSSKLVASGLESTINRLSKWL 54 (224)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 54 (224)
+.+||-+..+.++.--++-++ +.-+..+.++.+=+
T Consensus 4 kkN~~y~~~l~~~L~~~~~~e---~~~e~~L~eil~~L 38 (206)
T PF06570_consen 4 KKNQEYIFDLRKYLRSSGVSE---EEIEELLEEILPHL 38 (206)
T ss_pred hHHHHHHHHHHHHHHHcCCCH---HHHHHHHHHHHHHH
Confidence 345666666766663333333 22334444444433
No 62
>PF07694 5TM-5TMR_LYT: 5TMR of 5TMR-LYT; InterPro: IPR011620 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. Signal transducing histidine kinases are the key elements in two-component signal transduction systems, which control complex processes such as the initiation of development in microorganisms [, ]. Examples of histidine kinases are EnvZ, which plays a central role in osmoregulation [], and CheA, which plays a central role in the chemotaxis system []. Histidine kinases usually have an N-terminal ligand-binding domain and a C-terminal kinase domain, but other domains may also be present. The kinase domain is responsible for the autophosphorylation of the histidine with ATP, the phosphotransfer from the kinase to an aspartate of the response regulator, and (with bifunctional enzymes) the phosphotransfer from aspartyl phosphate back to ADP or to water []. The kinase core has a unique fold, distinct from that of the Ser/Thr/Tyr kinase superfamily. HKs can be roughly divided into two classes: orthodox and hybrid kinases [, ]. Most orthodox HKs, typified by the Escherichia coli EnvZ protein, function as periplasmic membrane receptors and have a signal peptide and transmembrane segment(s) that separate the protein into a periplasmic N-terminal sensing domain and a highly conserved cytoplasmic C-terminal kinase core. Members of this family, however, have an integral membrane sensor domain. Not all orthodox kinases are membrane bound, e.g., the nitrogen regulatory kinase NtrB (GlnL) is a soluble cytoplasmic HK []. Hybrid kinases contain multiple phosphodonor and phosphoacceptor sites and use multi-step phospho-relay schemes instead of promoting a single phosphoryl transfer. In addition to the sensor domain and kinase core, they contain a CheY-like receiver domain and a His-containing phosphotransfer (HPt) domain. This entry represents the transmembrane region of the 5TM-Lyt (5TM Receptors of the LytS-YhcK type) histidine kinase []. The two-component regulatory system LytS/LytT probably regulates genes involved in cell wall metabolism. ; GO: 0000155 two-component sensor activity, 0004673 protein histidine kinase activity, 0000160 two-component signal transduction system (phosphorelay), 0007047 cellular cell wall organization, 0016021 integral to membrane
Probab=25.93 E-value=3.3e+02 Score=21.38 Aligned_cols=38 Identities=8% Similarity=-0.101 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHcccCChHHHHHHHHHHHHHHHHHHHHHHH
Q 027394 145 AIGSYLSWLRVSQQLHTIGQVVVGAAVGSTFSLLWFFSWKS 185 (224)
Q Consensus 145 ~~~~lv~~SRiyLGvH~~sDVl~G~llG~~~a~i~~~l~~~ 185 (224)
..++.++.-|.++|. .+...+.+...+.+.+...+.++
T Consensus 65 i~~~i~~~~R~~~gg---~~~~~~~i~~~~~~i~~~l~~~~ 102 (169)
T PF07694_consen 65 IAGLIIGIYRFLLGG---PTAIPAFIIIILIGILAGLISRF 102 (169)
T ss_pred HHHHHHHHHHHHhcC---chHHHHHHHHHHHHHHHHHHHHH
Confidence 455567888998888 22333333444444444444444
No 63
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=25.79 E-value=4.2e+02 Score=27.47 Aligned_cols=32 Identities=6% Similarity=0.021 Sum_probs=22.1
Q ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 027394 159 LHTIGQVVVGAAVGSTFSLLWFFSWKSIVLEA 190 (224)
Q Consensus 159 vH~~sDVl~G~llG~~~a~i~~~l~~~~~~~~ 190 (224)
.+..-++++|.++|+++|.+.-++..+..+|.
T Consensus 206 ~~~L~~i~~GiliG~vvG~l~~~Ll~~l~rr~ 237 (810)
T TIGR00844 206 VTILWECIFGSILGCIIGYCGRKAIRFAEGKN 237 (810)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 34456788888888888887777666544443
No 64
>PF06295 DUF1043: Protein of unknown function (DUF1043); InterPro: IPR009386 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=24.74 E-value=77 Score=24.75 Aligned_cols=20 Identities=20% Similarity=0.182 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 027394 165 VVVGAAVGSTFSLLWFFSWK 184 (224)
Q Consensus 165 Vl~G~llG~~~a~i~~~l~~ 184 (224)
+++|+++|+++|++...+..
T Consensus 2 ~~i~lvvG~iiG~~~~r~~~ 21 (128)
T PF06295_consen 2 AIIGLVVGLIIGFLIGRLTS 21 (128)
T ss_pred hHHHHHHHHHHHHHHHHHhc
Confidence 57888888888887665553
No 65
>PLN02893 Cellulose synthase-like protein
Probab=24.73 E-value=6.3e+02 Score=25.88 Aligned_cols=43 Identities=2% Similarity=0.020 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHHcccCChHHHHHHHHHHHHHHHHHHHHHHHH
Q 027394 143 TLAIGSYLSWLRVSQQLHTIGQVVVGAAVGSTFSLLWFFSWKSI 186 (224)
Q Consensus 143 ~~~~~~lv~~SRiyLGvH~~sDVl~G~llG~~~a~i~~~l~~~~ 186 (224)
+-+.++.+|+.|+..| .+++..+++.++...+....+-+++-.
T Consensus 659 lNl~a~v~Gi~~~~~~-~~~~~~~~~~~~~~~~v~~~~P~~~gl 701 (734)
T PLN02893 659 INLVSFLWGIAQIFRQ-RNLEGLFLQMFLAGFAVVNCWPIYEAM 701 (734)
T ss_pred HHHHHHHHHHHHHHhC-CchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4467778899999888 356666666666555544555555543
No 66
>PRK09459 pspG phage shock protein G; Reviewed
Probab=24.25 E-value=1.4e+02 Score=21.54 Aligned_cols=8 Identities=25% Similarity=0.389 Sum_probs=3.4
Q ss_pred HHHHHHhh
Q 027394 85 AMVLKRIL 92 (224)
Q Consensus 85 ~~ilK~~v 92 (224)
.++.|+..
T Consensus 58 vW~~r~~~ 65 (76)
T PRK09459 58 VWVIRAIK 65 (76)
T ss_pred HHHHHHhh
Confidence 34444443
No 67
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=23.93 E-value=4.6e+02 Score=22.43 Aligned_cols=33 Identities=15% Similarity=0.240 Sum_probs=18.0
Q ss_pred chhhHHHHHHHHhhcCCcccccchhhHHHHHHHHHH
Q 027394 19 IEEDVNVFEQEALVDGSSKLVASGLESTINRLSKWL 54 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 54 (224)
+.|-+.+.++++..||-+. +.....+.+..|=+
T Consensus 20 Nqeyvh~vtkqli~~gksd---eeik~Il~e~ipqI 52 (226)
T COG4858 20 NQEYVHEVTKQLIGDGKSD---EEIKIILEEMIPQI 52 (226)
T ss_pred hHHHHHHHHHHHHhcCCCH---HHHHHHHHHHHHHH
Confidence 3456666666766666555 34444455444433
No 68
>PRK00376 lspA lipoprotein signal peptidase; Reviewed
Probab=23.74 E-value=3.9e+02 Score=21.54 Aligned_cols=13 Identities=23% Similarity=0.143 Sum_probs=8.0
Q ss_pred HHHHHHHHHhhCC
Q 027394 82 SALAMVLKRILNQ 94 (224)
Q Consensus 82 ~~~~~ilK~~v~r 94 (224)
..+.++.|.++.+
T Consensus 19 ~~lDq~tK~~~~~ 31 (160)
T PRK00376 19 IILDQLSKYLVLQ 31 (160)
T ss_pred HHHHHHHHHHHHH
Confidence 3466677776654
No 69
>PF08551 DUF1751: Eukaryotic integral membrane protein (DUF1751); InterPro: IPR013861 This entry is found in eukaryotic integral membrane proteins. Q12239 from SWISSPROT, a Saccharomyces cerevisiae (Baker's yeast) protein, has been shown to localise COP II vesicles [].
Probab=23.42 E-value=3.1e+02 Score=20.26 Aligned_cols=43 Identities=14% Similarity=0.223 Sum_probs=21.9
Q ss_pred HHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHhhhh
Q 027394 180 FFSWKSIVLEAFNSNLSIQIIVALAAAAFCVGFVLYVIKHWLK 222 (224)
Q Consensus 180 ~~l~~~~~~~~~~~s~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 222 (224)
.....++.+|.-.++.-.+.+.+.+.+.-.+.+..|.+.++.-
T Consensus 31 l~~~g~~lE~~WGs~E~lkFi~vv~~~tnl~~~~~~~~~y~i~ 73 (99)
T PF08551_consen 31 LFYGGRYLEPIWGSREFLKFILVVNVITNLLTFLLYLLLYAIT 73 (99)
T ss_pred HHHhhHHHHHhcChHHHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence 3334555555444333345555555555555555555555543
No 70
>PLN02248 cellulose synthase-like protein
Probab=23.41 E-value=5.1e+02 Score=27.92 Aligned_cols=48 Identities=8% Similarity=-0.108 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHHHcccCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 027394 142 FTLAIGSYLSWLRVSQQLHT-IGQVVVGAAVGSTFSLLWFFSWKSIVLE 189 (224)
Q Consensus 142 ~~~~~~~lv~~SRiyLGvH~-~sDVl~G~llG~~~a~i~~~l~~~~~~~ 189 (224)
++-+.++.+|++|+..|.+- +++.+++.+....+....|-+++-+..|
T Consensus 1045 llNLvAivvGv~R~i~g~~~~~~~l~g~l~~s~Wvv~~lyPf~kGL~gR 1093 (1135)
T PLN02248 1045 MVNLIAIAVGVSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGR 1093 (1135)
T ss_pred HHHHHHHHHHHHHHHhccCcchhhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 34467788999999887642 2456666665555544455455544433
No 71
>PRK11056 hypothetical protein; Provisional
Probab=23.35 E-value=1.7e+02 Score=22.91 Aligned_cols=13 Identities=15% Similarity=0.049 Sum_probs=6.2
Q ss_pred CChHHHHHHHHHH
Q 027394 160 HTIGQVVVGAAVG 172 (224)
Q Consensus 160 H~~sDVl~G~llG 172 (224)
+.|.=..+-..+|
T Consensus 63 g~P~~a~acFflG 75 (120)
T PRK11056 63 GLPGLAAACFFLG 75 (120)
T ss_pred CChHHHHHHHHHH
Confidence 3444444545555
No 72
>PF09835 DUF2062: Uncharacterized protein conserved in bacteria (DUF2062); InterPro: IPR018639 This domain, found in various prokaryotic proteins, has no known function. It is found at the C-terminal of family 2 glycosyltransferase proteins, in addition to proteins of unknown function.
Probab=23.35 E-value=1.1e+02 Score=24.07 Aligned_cols=23 Identities=13% Similarity=0.273 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 027394 165 VVVGAAVGSTFSLLWFFSWKSIV 187 (224)
Q Consensus 165 Vl~G~llG~~~a~i~~~l~~~~~ 187 (224)
++||.++|.+.+.+.|.+.....
T Consensus 121 ~~G~~i~~~v~~~i~Y~l~~~~~ 143 (154)
T PF09835_consen 121 LLGSLILGIVLGIISYFLVYFLV 143 (154)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555566666666665554433
No 73
>COG1289 Predicted membrane protein [Function unknown]
Probab=23.09 E-value=7.5e+02 Score=24.56 Aligned_cols=23 Identities=13% Similarity=0.447 Sum_probs=18.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHH
Q 027394 162 IGQVVVGAAVGSTFSLLWFFSWK 184 (224)
Q Consensus 162 ~sDVl~G~llG~~~a~i~~~l~~ 184 (224)
..|++.|.++|++.+...+-.++
T Consensus 481 ~~d~~iG~lIa~~~a~~v~~~~~ 503 (674)
T COG1289 481 FLDTLLGSLIALALAFLVWPLWR 503 (674)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc
Confidence 56999999999988886655543
No 74
>PF01594 UPF0118: Domain of unknown function DUF20; InterPro: IPR002549 This is a family of hypothetical proteins. A number of the sequence records state they are transmembrane proteins or putative permeases. It is not clear what source suggested that these proteins might be permeases and this information should be treated with caution.
Probab=22.86 E-value=5.1e+02 Score=22.53 Aligned_cols=23 Identities=4% Similarity=-0.035 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 027394 164 QVVVGAAVGSTFSLLWFFSWKSI 186 (224)
Q Consensus 164 DVl~G~llG~~~a~i~~~l~~~~ 186 (224)
+++.-.++|.+.+++.....++.
T Consensus 20 ~~~~p~~~a~~la~~~~p~~~~l 42 (327)
T PF01594_consen 20 PFLLPFVLALVLAYLLNPLVRFL 42 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777888888888888888776
No 75
>PRK13240 pbsY photosystem II protein Y; Reviewed
Probab=22.39 E-value=1.5e+02 Score=18.75 Aligned_cols=21 Identities=19% Similarity=0.496 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 027394 198 QIIVALAAAAFCVGFVLYVIK 218 (224)
Q Consensus 198 ~~~v~~~~~~~~~~~~~~~~~ 218 (224)
|.+++..++..+.|+.+|-|.
T Consensus 4 RlliVl~Pil~A~~Wa~fNIg 24 (40)
T PRK13240 4 RLLIVLAPILAAAGWAVFNIG 24 (40)
T ss_pred hHHHHHHHHHHHHHHHHHHhh
Confidence 677889999999999999764
No 76
>KOG3058 consensus Uncharacterized conserved protein [Function unknown]
Probab=21.02 E-value=1.2e+02 Score=28.02 Aligned_cols=16 Identities=25% Similarity=0.210 Sum_probs=12.9
Q ss_pred HcccCChHHHHHHHHH
Q 027394 156 SQQLHTIGQVVVGAAV 171 (224)
Q Consensus 156 yLGvH~~sDVl~G~ll 171 (224)
--.-||--||+.++-+
T Consensus 254 ~sr~HYTIDVvvAyyi 269 (351)
T KOG3058|consen 254 ASRKHYTIDVVVAYYI 269 (351)
T ss_pred HhCCceeEEEEEehhh
Confidence 3478999999998865
Done!