BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027395
(224 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SI38|ANR1_ARATH MADS-box transcription factor ANR1 OS=Arabidopsis thaliana
GN=ANR1 PE=1 SV=1
Length = 234
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 56/70 (80%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
MGR K+++++IDN + QVT++KRR G++KKAKELS+LCD +VG+++FS +GKL Y+S+
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELSILCDAEVGVIIFSSTGKLYDYASN 60
Query: 61 RRIEDIFLRF 70
++ I R+
Sbjct: 61 SSMKTIIERY 70
>sp|O82794|AGL24_ARATH MADS-box protein AGL24 OS=Arabidopsis thaliana GN=AGL24 PE=1 SV=1
Length = 220
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
M R K+ ++KIDN A QVT++KRR GI KKA ELSVLCD DV L++FS +GKL ++SSS
Sbjct: 1 MAREKIRIKKIDNITARQVTFSKRRRGIFKKADELSVLCDADVALIIFSATGKLFEFSSS 60
Query: 61 RRIEDIFLRF 70
R+ DI R+
Sbjct: 61 -RMRDILGRY 69
>sp|Q6EP49|MAD27_ORYSJ MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica
GN=MADS27 PE=2 SV=2
Length = 240
Score = 82.4 bits (202), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 52/60 (86%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
MGR K+++++IDN + QVT++KRR+GI KKAKEL++LCD +VGL++FS +G+L +YSS+
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEYSST 60
>sp|Q6Z6W2|MAD57_ORYSJ MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica
GN=MADS57 PE=2 SV=2
Length = 241
Score = 81.3 bits (199), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 53/60 (88%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
MGR K+++++IDN + QVT++KRR+G++KKAKELS+LCD +VGL++FS +G+L ++SS+
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEFSST 60
>sp|Q9SZJ6|AGL21_ARATH Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana
GN=AGL21 PE=1 SV=1
Length = 228
Score = 80.9 bits (198), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 51/60 (85%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
MGR K+++Q+ID+ + QVT++KRR G++KKAKEL++LCD +VGL++FS +GKL ++SS
Sbjct: 1 MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASS 60
>sp|Q9FUY6|JOIN_SOLLC MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1
Length = 265
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 47/60 (78%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
M R K+ ++KIDN A QVT++KRR G+ KKA+ELSVLCD DV L++FS +GKL YSSS
Sbjct: 1 MAREKIQIKKIDNSTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFDYSSS 60
>sp|Q9S7Q7|FLC_ARATH MADS-box protein FLOWERING LOCUS C OS=Arabidopsis thaliana GN=FLC
PE=2 SV=1
Length = 196
Score = 78.6 bits (192), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 69/105 (65%), Gaps = 2/105 (1%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
MGR+KL +++I+N + QVT++KRR+G+++KA++LSVLCD V LL+ S SGKL +SS
Sbjct: 1 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSG 60
Query: 61 RRIEDIFLRFICDEKQEPLENEDHLYRSLVHSKCEGEMLDLIKKK 105
+ I R+ + + L+ DH ++L + E+L+L+ K
Sbjct: 61 DNLVKILDRY-GKQHADDLKALDHQSKALNYG-SHYELLELVDSK 103
>sp|A2RVQ5|AGL16_ARATH Agamous-like MADS-box protein AGL16 OS=Arabidopsis thaliana
GN=AGL16 PE=1 SV=1
Length = 240
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 51/60 (85%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
MGR K+ +++I+N + QVT++KRR+G++KKAKEL++LCD +VG+++FS +G+L +SSS
Sbjct: 1 MGRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSS 60
>sp|Q03416|GLOB_TOBAC Floral homeotic protein GLOBOSA OS=Nicotiana tabacum GN=GLO PE=2
SV=1
Length = 209
Score = 78.2 bits (191), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 62/89 (69%), Gaps = 8/89 (8%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
MGR K+ +++I+N QVTY+KRR+GI+KKAKE+SVLCD V +++F+ SGK+ ++SS+
Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEFSST 60
Query: 61 RRIEDIFLRF-------ICDEKQEPLENE 82
+ DI ++ + D K E L+NE
Sbjct: 61 SLV-DILDQYHKLTGRRLWDAKHENLDNE 88
>sp|Q84NC5|MAD25_ORYSJ MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica
GN=MADS25 PE=2 SV=2
Length = 227
Score = 78.2 bits (191), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 49/60 (81%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
MGR K+ +++IDN QVT++KRR G++KKA+EL++LCD DVGL++FS +G+L +SSS
Sbjct: 1 MGRGKIAIKRIDNTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDFSSS 60
>sp|Q03488|FBP1_PETHY Floral homeotic protein FBP1 OS=Petunia hybrida GN=FBP1 PE=2 SV=1
Length = 210
Score = 77.8 bits (190), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 62/89 (69%), Gaps = 8/89 (8%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
MGR K+ +++I+N QVTY+KRR+GI+KKAKE+SVLCD V +++F+ SGK+ ++SS+
Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEFSST 60
Query: 61 RRIEDIFLRF-------ICDEKQEPLENE 82
+ DI ++ + D K E L+NE
Sbjct: 61 SLV-DILDQYHKLTGRRLLDAKHENLDNE 88
>sp|Q9XGJ4|GGM13_GNEGN MADS-box protein GGM13 OS=Gnetum gnemon GN=GGM13 PE=2 SV=1
Length = 237
Score = 77.8 bits (190), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 67/102 (65%), Gaps = 4/102 (3%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSS- 59
MGR K+ +++I+N QVT++KRR G++KKA ELSVLCD ++GL++FS SGKL +YSS
Sbjct: 1 MGRGKIEIKRIENTTNRQVTFSKRRGGLLKKAHELSVLCDAELGLIIFSSSGKLFEYSSA 60
Query: 60 SRRIEDIFLRF--ICDEKQEPLENEDHLYRSLVHSKCEGEML 99
S ++ I R+ + + +N+ HLY + K E E L
Sbjct: 61 SSSMKKIIERYQKVSGARITEYDNQ-HLYCEMTRMKNENEKL 101
>sp|Q6Q9I2|MAD15_ORYSJ MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica
GN=MADS15 PE=1 SV=2
Length = 267
Score = 77.0 bits (188), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 53/70 (75%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
MGR K+ +++I+N QVT++KRR+G++KKA E+SVLCD +V ++FSP GKL +Y++
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
Query: 61 RRIEDIFLRF 70
R++ I R+
Sbjct: 61 SRMDKILERY 70
>sp|Q9FVC1|SVP_ARATH MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1
Length = 240
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 47/60 (78%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
M R K+ ++KIDN A QVT++KRR G+ KKA+ELSVLCD DV L++FS +GKL ++ SS
Sbjct: 1 MAREKIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSS 60
>sp|Q6Q9H6|MAD34_ORYSJ MADS-box transcription factor 34 OS=Oryza sativa subsp. japonica
GN=MADS34 PE=2 SV=2
Length = 239
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 66/105 (62%), Gaps = 6/105 (5%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
MGR K+++Q+I+N + QVT+ KRR+G++KKA ELS+LCD +V L++FS +G+L ++SSS
Sbjct: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
Query: 61 RRIEDI---FLRFICDEKQEPLENEDHL---YRSLVHSKCEGEML 99
+ + R+I + D + Y+ V+ K E+L
Sbjct: 61 SNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEIL 105
>sp|O64645|SOC1_ARATH MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1
Length = 214
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 14/114 (12%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
M R K M++I+N + QVT++KRR+G++KKA ELSVLCD +V L++FSP GKL +++SS
Sbjct: 1 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASS 60
Query: 61 RRIEDI--FLRFICDE-KQEPL--ENEDHLYRSLVHSKCEGEMLDLIKKKEELE 109
+ I +LR D +P+ EN HL + E +++KK E+LE
Sbjct: 61 NMQDTIDRYLRHTKDRVSTKPVSEENMQHL---------KYEAANMMKKIEQLE 105
>sp|Q38847|AGL15_ARATH Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana
GN=AGL15 PE=1 SV=1
Length = 268
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 50/60 (83%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
MGR K+ +++I+N + QVT++KRR G++KKA+ELSVLCD +V +++FS SGKL +YSS+
Sbjct: 1 MGRGKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEYSST 60
>sp|Q07474|MADS2_PETHY Floral homeotic protein PMADS 2 OS=Petunia hybrida GN=PMADS2 PE=2
SV=1
Length = 212
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 58/90 (64%), Gaps = 8/90 (8%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSS- 59
MGR K+ +++I+N QVTY+KRR+GI+KKAKE++VLCD V L++F SGK+ +Y S
Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAKVSLIIFGNSGKMHEYCSP 60
Query: 60 SRRIEDIF-------LRFICDEKQEPLENE 82
S + D+ R + D K E L NE
Sbjct: 61 STTLPDMLDGYQKTSGRRLWDAKHENLSNE 90
>sp|Q6VAM4|MAD23_ORYSJ MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica
GN=MADS23 PE=2 SV=1
Length = 159
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 48/60 (80%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
MGR K+ +++IDN + QVT++KRR G+ KKA+ELS+LCD +VGLL+FS + +L ++SS
Sbjct: 1 MGRGKIEIKRIDNATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFASS 60
>sp|Q0D4T4|MAD18_ORYSJ MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica
GN=MADS18 PE=1 SV=1
Length = 249
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 51/70 (72%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
MGR + +++I+N QVT++KRR+G++KKA E+SVLCD DV L++FS GKL ++SS
Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSH 60
Query: 61 RRIEDIFLRF 70
+E I R+
Sbjct: 61 SSMEGILERY 70
>sp|A2YNI2|MAD18_ORYSI MADS-box transcription factor 18 OS=Oryza sativa subsp. indica
GN=MADS18 PE=2 SV=2
Length = 249
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 51/70 (72%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
MGR + +++I+N QVT++KRR+G++KKA E+SVLCD DV L++FS GKL ++SS
Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSH 60
Query: 61 RRIEDIFLRF 70
+E I R+
Sbjct: 61 SSMEGILERY 70
>sp|Q8RYD9|TT16_ARATH Protein TRANSPARENT TESTA 16 OS=Arabidopsis thaliana GN=TT16 PE=1
SV=1
Length = 252
Score = 74.7 bits (182), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
MGR K+ ++KI+N A QVT++KRR G++KK +ELS+LCD +GL++FS +GKL+++ S
Sbjct: 1 MGRGKIEIKKIENQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGKLSEFCSE 60
Query: 61 R-RIEDIFLRFI 71
+ R+ + R++
Sbjct: 61 QNRMPQLIDRYL 72
>sp|Q38840|AGL17_ARATH Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana
GN=AGL17 PE=2 SV=2
Length = 227
Score = 74.3 bits (181), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 49/60 (81%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
MGR K+++QKID+ + QVT++KRR G++KKAKEL++LCD +V L++FS + KL ++SS
Sbjct: 1 MGRGKIVIQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDFASS 60
>sp|Q9M2K8|AGL18_ARATH Agamous-like MADS-box protein AGL18 OS=Arabidopsis thaliana
GN=AGL18 PE=2 SV=1
Length = 256
Score = 74.3 bits (181), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
MGR ++ ++KI+N + QVT++KRR+G++KKAKELS+LCD +V L++FS +GK+ +SS
Sbjct: 1 MGRGRIEIKKIENINSRQVTFSKRRNGLIKKAKELSILCDAEVALIIFSSTGKIYDFSSV 60
Query: 61 RRIEDIFLRF 70
+E I R+
Sbjct: 61 -CMEQILSRY 69
>sp|Q38838|AGL14_ARATH Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana
GN=AGL14 PE=1 SV=2
Length = 221
Score = 74.3 bits (181), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 51/70 (72%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
M R K M++I+N + QVT++KRR+G++KKA ELSVLCD +V L++FSP GKL ++SSS
Sbjct: 1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSS 60
Query: 61 RRIEDIFLRF 70
I R+
Sbjct: 61 SSIPKTVERY 70
>sp|Q03378|GLOB_ANTMA Floral homeotic protein GLOBOSA OS=Antirrhinum majus GN=GLO PE=1
SV=1
Length = 215
Score = 74.3 bits (181), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 60/90 (66%), Gaps = 8/90 (8%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSS- 59
MGR K+ +++I+N QVTY+KRR+GI+KKAKE+SVLCD V +++F+ SGK+ ++ S
Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEISVLCDAHVSVIIFASSGKMHEFCSP 60
Query: 60 SRRIEDIFLRF-------ICDEKQEPLENE 82
S + D+ + + D K E L+NE
Sbjct: 61 STTLVDMLDHYHKLSGKRLWDPKHEHLDNE 90
>sp|P0C5B1|MAD14_ORYSI MADS-box transcription factor 14 OS=Oryza sativa subsp. indica
GN=MADS14 PE=2 SV=1
Length = 246
Score = 73.9 bits (180), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 51/70 (72%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
MGR K+ +++I+N QVT++KRR G++KKA E+SVLCD +V L++FS GKL KY++
Sbjct: 1 MGRGKVQLKRIENTINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYKYATD 60
Query: 61 RRIEDIFLRF 70
++ I R+
Sbjct: 61 SCMDKILERY 70
>sp|Q40170|AGL8_SOLLC Agamous-like MADS-box protein AGL8 homolog OS=Solanum
lycopersicum GN=TDR4 PE=2 SV=1
Length = 227
Score = 73.9 bits (180), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 52/70 (74%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
MGR ++ +++I+N QVT++KRR G++KKA E+SVLCD +VGL++FS GKL +Y++
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYAND 60
Query: 61 RRIEDIFLRF 70
+E I R+
Sbjct: 61 SCMERILERY 70
>sp|O22328|AGL8_SOLCO Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii
GN=SCM1 PE=2 SV=1
Length = 250
Score = 73.9 bits (180), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 52/70 (74%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
MGR ++ +++I+N QVT++KRR G++KKA E+SVLCD +VGL++FS GKL +Y++
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYATD 60
Query: 61 RRIEDIFLRF 70
+E + R+
Sbjct: 61 SCMERLLERY 70
>sp|Q5K4R0|MAD47_ORYSJ MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica
GN=MADS47 PE=1 SV=2
Length = 246
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 53/68 (77%), Gaps = 1/68 (1%)
Query: 3 RRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSSRR 62
R ++ +++IDN A QVT++KRR G+ KKA+ELS+LCD +VGL++FS +GKL +++S+
Sbjct: 22 RERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFAST-S 80
Query: 63 IEDIFLRF 70
+E I R+
Sbjct: 81 MEQIIDRY 88
>sp|Q40702|MADS2_ORYSJ MADS-box transcription factor 2 OS=Oryza sativa subsp. japonica
GN=MADS2 PE=2 SV=1
Length = 209
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 87/157 (55%), Gaps = 24/157 (15%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
MGR K+ +++I+N QVT++KRR GI+KKA+E+SVLCD +VG+++FS +GKL Y S
Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
Query: 61 R----RIEDIFL----RFICDEKQEPLENE--------DHLYRSLVHSKCEGEMLD---- 100
+ RI + + + + DEK + L E D++ L H K GE L+
Sbjct: 61 KTSLSRILEKYQTNSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLK--GEDLNSLQP 118
Query: 101 --LIKKKEELEKKLIELCERQFDAEEKMSFYQPKVED 135
LI +E L+ ++ + ++ D E+ +ED
Sbjct: 119 KELIMIEEALDNGIVNVNDKLMDHWERHVRTDKMLED 155
>sp|Q42429|AGL8_SOLTU Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum
PE=2 SV=1
Length = 250
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 52/70 (74%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
MGR ++ +++I+N QVT++KRR G++KKA E+SVLCD +VGL++FS GKL +Y++
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYAND 60
Query: 61 RRIEDIFLRF 70
+E + R+
Sbjct: 61 SCMERLLERY 70
>sp|Q944S9|MAD16_ORYSJ MADS-box transcription factor 16 OS=Oryza sativa subsp. japonica
GN=MADS16 PE=1 SV=2
Length = 224
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSS- 59
MGR K+ +++I+N QVTY+KRR GI+KKA+EL+VLCD V ++MFS +GK ++ S
Sbjct: 1 MGRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSP 60
Query: 60 SRRIEDIFLRF 70
S I+ IF R+
Sbjct: 61 STDIKGIFDRY 71
>sp|Q41274|AGL8_SINAL Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba
GN=AGL8 PE=2 SV=1
Length = 241
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 51/70 (72%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
MGR ++ +++I+N QVT++KRR G++KKA E+SVLCD +V L++FS GKL +YS+
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALVIFSSKGKLFEYSTD 60
Query: 61 RRIEDIFLRF 70
+E I R+
Sbjct: 61 SCMEKILERY 70
>sp|Q6R4R9|CALA_BRAOB Truncated transcription factor CAULIFLOWER A OS=Brassica oleracea
var. botrytis GN=CAL-A PE=2 SV=2
Length = 150
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 51/70 (72%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
MGR ++ M++I+N QVT++KRR G++KKA E+S+LCD +V L++FS GKL +YSS
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIVFSHKGKLFEYSSE 60
Query: 61 RRIEDIFLRF 70
+E + R+
Sbjct: 61 SCMEKVLERY 70
>sp|Q55F37|SRFC_DICDI Serum factor response C OS=Dictyostelium discoideum GN=srfC PE=3
SV=1
Length = 1050
Score = 72.8 bits (177), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 60/86 (69%), Gaps = 3/86 (3%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
MGR K+ ++KI N Q T+TKR++G++KKA ELS+LCD ++ +++FS + KL +Y SS
Sbjct: 3 MGRNKITIEKISNERNRQATFTKRKNGLIKKAMELSILCDCEIAMIVFSSNNKLFQY-SS 61
Query: 61 RRIEDIFLRFI--CDEKQEPLENEDH 84
R ++ + +R+ D ++ L N+D+
Sbjct: 62 RDMDKLLIRYTDNTDNTRKNLTNQDY 87
>sp|Q9SBK9|CAL_BRARP Transcription factor CAULIFLOWER OS=Brassica rapa subsp.
pekinensis GN=CAL PE=2 SV=1
Length = 254
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 51/70 (72%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
MGR ++ M++I+N QVT++KRR G++KKA E+S+LCD +V L++FS GKL +YSS
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIVFSHKGKLFEYSSE 60
Query: 61 RRIEDIFLRF 70
+E + R+
Sbjct: 61 SCMEKVLERY 70
>sp|Q84NC2|MAD31_ORYSJ MADS-box transcription factor 31 OS=Oryza sativa subsp. japonica
GN=MADS31 PE=2 SV=1
Length = 178
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSS- 59
MGR ++ ++KI+N QVT++KRR G++KKA EL++LCD +G+++FS +GK+ +YSS
Sbjct: 1 MGRGRVELKKIENPTNRQVTFSKRRMGLLKKANELAILCDAQIGVIVFSGTGKMYEYSSP 60
Query: 60 SRRIEDIFLRFI 71
RI +IF R++
Sbjct: 61 PWRIANIFDRYL 72
>sp|Q6R4S6|CAL_BRARC Transcription factor CAULIFLOWER OS=Brassica rapa subsp.
chinensis GN=CAL PE=2 SV=1
Length = 254
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 51/70 (72%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
MGR ++ M++I+N QVT++KRR G++KKA E+S+LCD +V L++FS GKL +YSS
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIVFSHKGKLFEYSSE 60
Query: 61 RRIEDIFLRF 70
+E + R+
Sbjct: 61 SCMEKVLERY 70
>sp|Q6R4S3|CAL_BRARA Transcription factor CAULIFLOWER OS=Brassica rapa GN=CAL PE=2
SV=1
Length = 254
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 51/70 (72%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
MGR ++ M++I+N QVT++KRR G++KKA E+S+LCD +V L++FS GKL +YSS
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIVFSHKGKLFEYSSE 60
Query: 61 RRIEDIFLRF 70
+E + R+
Sbjct: 61 SCMEKVLERY 70
>sp|Q6R4R6|CALD_BRAOB Truncated transcription factor CAULIFLOWER D OS=Brassica oleracea
var. botrytis GN=CAL-D PE=2 SV=1
Length = 148
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 51/70 (72%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
MGR ++ M++I+N QVT++KRR G++KKA E+S+LCD +V L++FS GKL +YSS
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIVFSHKGKLFEYSSE 60
Query: 61 RRIEDIFLRF 70
+E + R+
Sbjct: 61 SCMEKVLERY 70
>sp|Q6R4R7|CALC_BRAOB Truncated transcription factor CAULIFLOWER C OS=Brassica oleracea
var. botrytis GN=CAL-C PE=2 SV=1
Length = 148
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 51/70 (72%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
MGR ++ M++I+N QVT++KRR G++KKA E+S+LCD +V L++FS GKL +YSS
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIVFSHKGKLFEYSSE 60
Query: 61 RRIEDIFLRF 70
+E + R+
Sbjct: 61 SCMEKVLERY 70
>sp|Q2QW53|MAD13_ORYSJ MADS-box transcription factor 13 OS=Oryza sativa subsp. japonica
GN=MADS13 PE=1 SV=2
Length = 270
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 52/70 (74%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
MGR ++ +++I+N + QVT+ KRR+G++KKA ELSVLCD +V L++FS G+L +YS++
Sbjct: 1 MGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60
Query: 61 RRIEDIFLRF 70
++ R+
Sbjct: 61 NNVKATIDRY 70
>sp|Q6R4R8|CALB_BRAOB Truncated transcription factor CAULIFLOWER B OS=Brassica oleracea
var. botrytis GN=CAL-B PE=2 SV=1
Length = 150
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 51/70 (72%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
MGR ++ M++I+N QVT++KRR G++KKA E+S+LCD +V L++FS GKL +YSS
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEVSILCDAEVSLIVFSHKGKLFEYSSE 60
Query: 61 RRIEDIFLRF 70
+E + R+
Sbjct: 61 SCMEKVLERY 70
>sp|Q39081|CAL_ARATH Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL
PE=1 SV=3
Length = 255
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 52/70 (74%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
MGR ++ +++I+N QVT++KRR G++KKA+E+SVLCD +V L++FS GKL +YSS
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSE 60
Query: 61 RRIEDIFLRF 70
+E + R+
Sbjct: 61 SCMEKVLERY 70
>sp|Q39295|AGL15_BRANA Agamous-like MADS-box protein AGL15 OS=Brassica napus GN=AGL15
PE=3 SV=1
Length = 264
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
MGR K+ +++I+N + QVT++KRR G++KKA ELSVLCD +V +++FS SGKL ++SS+
Sbjct: 1 MGRGKIEIKRIENANSRQVTFSKRRAGLLKKAHELSVLCDAEVAVIVFSKSGKLFEFSST 60
Query: 61 RRIEDIFLRF 70
++ LR+
Sbjct: 61 -SMKKTLLRY 69
>sp|Q38876|AGL8_ARATH Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana
GN=AGL8 PE=1 SV=1
Length = 242
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 51/70 (72%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
MGR ++ +++I+N QVT++KRR G++KKA E+SVLCD +V L++FS GKL +YS+
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTD 60
Query: 61 RRIEDIFLRF 70
+E I R+
Sbjct: 61 SCMERILERY 70
>sp|Q10CQ1|MAD14_ORYSJ MADS-box transcription factor 14 OS=Oryza sativa subsp. japonica
GN=MADS14 PE=1 SV=2
Length = 246
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 51/70 (72%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
MGR K+ +++I+N QVT++KRR G++KKA E+SVLCD +V L++FS GKL +Y++
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATD 60
Query: 61 RRIEDIFLRF 70
++ I R+
Sbjct: 61 SCMDKILERY 70
>sp|Q39375|CAL_BRAOT Transcription factor CAULIFLOWER OS=Brassica oleracea var.
italica GN=CAL PE=2 SV=1
Length = 251
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 55/79 (69%), Gaps = 3/79 (3%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
MGR ++ M++I+N QVT++KRR G++KKA E+S+LCD +V L++FS GKL +YSS
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIVFSHKGKLFEYSSE 60
Query: 61 RRIEDI---FLRFICDEKQ 76
+E + + R+ EKQ
Sbjct: 61 SCMEKVLEHYERYSYAEKQ 79
>sp|D7KWY6|AP1_ARALL Floral homeotic protein APETALA 1 OS=Arabidopsis lyrata subsp.
lyrata GN=AP1 PE=3 SV=1
Length = 256
Score = 71.6 bits (174), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 51/70 (72%)
Query: 1 MGRRKLLMQKIDNYPALQVTYTKRRDGIVKKAKELSVLCDTDVGLLMFSPSGKLTKYSSS 60
MGR ++ +++I+N QVT++KRR G++KKA E+SVLCD +V L++FS GKL +YS+
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 61 RRIEDIFLRF 70
+E I R+
Sbjct: 61 SCMEKILERY 70
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,626,770
Number of Sequences: 539616
Number of extensions: 3370572
Number of successful extensions: 14094
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 157
Number of HSP's that attempted gapping in prelim test: 13815
Number of HSP's gapped (non-prelim): 432
length of query: 224
length of database: 191,569,459
effective HSP length: 113
effective length of query: 111
effective length of database: 130,592,851
effective search space: 14495806461
effective search space used: 14495806461
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)