BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027403
(224 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q09893|YAI5_SCHPO Uncharacterized protein C24B11.05 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC24B11.05 PE=3 SV=1
Length = 226
Score = 82.4 bits (202), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 97/214 (45%), Gaps = 31/214 (14%)
Query: 1 MSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEK-LKPDP 59
S L I E R+ YR +G + GL + +E D ++ V LP EK +K D
Sbjct: 35 FSDKLGIPTEEAERLREVYYRHYGIAIRGL-VLHHEIDAVDYDQRVDQSLPLEKVIKKDE 93
Query: 60 VLRNLLLSMPQRK--IIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDG 117
VLR +LL + ++ IFTNA HA VL LG+EDCF DG
Sbjct: 94 VLREMLLELRKKYKCWIFTNAYIVHANRVLKYLGIEDCF-------------------DG 134
Query: 118 IENNSFSSNQRILCKPSLEAIETAIRIANV-DPKKTIFFDDSARNIASAKAAGLHTVIV- 175
I +++ ++ KP E E +R A V D K IF DDS NI A+ G +
Sbjct: 135 ITYCDYNAKD-LIAKPMPEMYERVMREAGVTDKDKCIFVDDSYGNILGAREFGWKYTVQL 193
Query: 176 ---GSSVPVPPA-DHALNSIHNIKEAIPEIWEGE 205
G +P P A H + IH K + EI +GE
Sbjct: 194 VEHGDPLPQPQAGSHVIRDIHKFKHLLDEI-DGE 226
>sp|P53078|SDT1_YEAST Suppressor of disruption of TFIIS OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SDT1 PE=1 SV=1
Length = 280
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 85/178 (47%), Gaps = 27/178 (15%)
Query: 4 HLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEK-LKPDPVLR 62
HL + + + Y+E+G + GL + ++ + E++ V LP + LKPD LR
Sbjct: 88 HLKLSPEDAHVLNNSYYKEYGLAIRGL-VMFHKVNALEYNRLVDDSLPLQDILKPDIPLR 146
Query: 63 NLLLSMPQ-----RKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDG 117
N+LL + Q + +FTNA + HA+ L LG+ D F DG
Sbjct: 147 NMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLF-------------------DG 187
Query: 118 IENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFF-DDSARNIASAKAAGLHTVI 174
+ +S ++CKP ++A E A++ + + + +F DDS +NI + G+ T I
Sbjct: 188 LTYCDYSRTDTLVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCI 245
>sp|P40025|PHM8_YEAST Phosphate metabolism protein 8 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PHM8 PE=1 SV=1
Length = 321
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 83/179 (46%), Gaps = 26/179 (14%)
Query: 5 LHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEK-LKPDPVLRN 63
L D+ E R+ Y+E+G ++ GL D +++ F+ LP + LKPD LR
Sbjct: 86 LGFDDDEAERLIESYYQEYGLSVKGLIKNKQIDDVLQYNTFIDDSLPLQDYLKPDWKLRE 145
Query: 64 LLLSMPQRK-------IIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTD 116
LL+++ ++K +FTN+ + HA+ + LG+ D F+GI P
Sbjct: 146 LLINLKKKKLGKFDKLWLFTNSYKNHAIRCVKILGIADLFDGITYCHYDRP--------- 196
Query: 117 GIENNSFSSNQRILCKPSLEAIETAIRIANVDP-KKTIFFDDSARNIASAKAAGLHTVI 174
IE + +CKP + ETA + + F DD+ N+ SA + G+ VI
Sbjct: 197 -IE-------EEFICKPDPKFFETAKLQSGLSSFANAWFIDDNESNVRSALSMGMGHVI 247
>sp|Q9X0Y1|P1254_THEMA Phosphorylated carbohydrates phosphatase TM_1254 OS=Thermotoga
maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM
10099) GN=TM_1254 PE=1 SV=1
Length = 216
Score = 40.4 bits (93), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 26/124 (20%)
Query: 53 EKLKPDPVLRNLLLSMPQRKI---IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRL 109
E LK +P +R L + ++I + T+ Q+ A+E L RL LE F+ ++ F
Sbjct: 81 ELLKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFD-VMVF------- 132
Query: 110 QPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAG 169
D ++N KP E + NV P+K + F+DS + +AK+AG
Sbjct: 133 -----GDQVKNG----------KPDPEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAG 177
Query: 170 LHTV 173
+ +
Sbjct: 178 IERI 181
>sp|P0A8Y4|YIHX_SHIFL Alpha-D-glucose-1-phosphate phosphatase YihX OS=Shigella flexneri
GN=yihX PE=3 SV=1
Length = 199
Score = 36.6 bits (83), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVP 182
KP + ++ P T+FFDD+A NI A G+ +++V +P
Sbjct: 141 KPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKTTIP 191
>sp|P0A8Y3|YIHX_ECOLI Alpha-D-glucose-1-phosphate phosphatase YihX OS=Escherichia coli
(strain K12) GN=yihX PE=1 SV=1
Length = 199
Score = 36.6 bits (83), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVP 182
KP + ++ P T+FFDD+A NI A G+ +++V +P
Sbjct: 141 KPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKTTIP 191
>sp|Q9K6Y7|PPAX_BACHD Pyrophosphatase PpaX OS=Bacillus halodurans (strain ATCC BAA-125 /
DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=ppaX PE=3
SV=1
Length = 215
Score = 36.6 bits (83), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 23/106 (21%)
Query: 74 IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 133
I T ++ AM+ L GL++ F+ I+ D +EN KP
Sbjct: 103 IVTTKIRETAMKGLKLFGLDEFFDVIVAL-------------DDVEN----------VKP 139
Query: 134 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 179
+ E +E A+ ++TI D++ +I K AG+ T +VG ++
Sbjct: 140 NPEPLEKAMNALGAKKEETIMVGDNSHDILGGKNAGVKTAVVGYAI 185
>sp|Q5F7W4|GPH_NEIG1 Phosphoglycolate phosphatase OS=Neisseria gonorrhoeae (strain ATCC
700825 / FA 1090) GN=NGO1052 PE=3 SV=1
Length = 236
Score = 35.4 bits (80), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 60/146 (41%), Gaps = 33/146 (22%)
Query: 64 LLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSF 123
LL S+ +I TN ++ A E+L +LGL D F I+ +++ +
Sbjct: 107 LLKSLGIPLVIITNKNEILAAELLKQLGLADYFSLILGGDSLPEK--------------- 151
Query: 124 SSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPP 183
KPS + A + +D + DS +I +AKAAG +V V
Sbjct: 152 --------KPSPLPLRHAAEVLGIDAANMLMVGDSRNDIIAAKAAGCLSV----GVTFGY 199
Query: 184 ADHALNSIHN------IKEAIPEIWE 203
D L S + I A+PEI+E
Sbjct: 200 GDMTLLSQDDTTRPDRIIGALPEIYE 225
>sp|Q8K370|ACD10_MOUSE Acyl-CoA dehydrogenase family member 10 OS=Mus musculus GN=Acad10
PE=2 SV=1
Length = 1069
Score = 35.4 bits (80), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%)
Query: 130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 175
+CKP + ++ ++ P + IF DD N+ A + G+HT+ V
Sbjct: 186 ICKPDPRIFQLCLQRLSLQPSEAIFLDDLGSNLKVAASLGIHTIKV 231
>sp|B8GQ45|SPEE_THISH Spermidine synthase OS=Thioalkalivibrio sp. (strain HL-EbGR7)
GN=speE PE=3 SV=1
Length = 283
Score = 34.3 bits (77), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%)
Query: 145 ANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNS 190
+N DP+ + FDD + + A L +I+ S+ PV PA+ ++
Sbjct: 127 SNDDPRAKLLFDDGIKYVQDAAPGSLDVIIIDSTDPVGPAEGLFST 172
>sp|Q88QS2|GPH_PSEPK Phosphoglycolate phosphatase OS=Pseudomonas putida (strain KT2440)
GN=PP_0416 PE=3 SV=1
Length = 272
Score = 34.3 bits (77), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTV 173
KP A+ +++A V P++++F DS ++ +AKAAG+ V
Sbjct: 157 KPDPAALLFVMQMAGVTPQQSLFVGDSRSDVQAAKAAGVQCV 198
>sp|P42509|GPH_PSEPU Probable phosphoglycolate phosphatase (Fragment) OS=Pseudomonas
putida GN=gph PE=3 SV=1
Length = 251
Score = 34.3 bits (77), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTV 173
KP A+ +++A V P++++F DS ++ +AKAAG+ V
Sbjct: 136 KPDPAALLFVMQMAGVTPQQSLFVGDSRSDVLAAKAAGVQCV 177
>sp|Q6JQN1|ACD10_HUMAN Acyl-CoA dehydrogenase family member 10 OS=Homo sapiens GN=ACAD10
PE=2 SV=1
Length = 1059
Score = 33.9 bits (76), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 175
+CKP + + + P ++IF DD N+ A G+HT+ V
Sbjct: 186 ICKPDPRIYKLCLEQLGLQPSESIFLDDLGTNLKEAARLGIHTIKV 231
>sp|Q3BN93|SPEE_XANC5 Spermidine synthase OS=Xanthomonas campestris pv. vesicatoria
(strain 85-10) GN=speE PE=3 SV=1
Length = 285
Score = 33.9 bits (76), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 145 ANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEG 204
AN D + + FDD +A+ A + VIV S+ PV PA+ N E+ + +
Sbjct: 129 ANHDARAELLFDDGVAYMANCPAGSVDIVIVDSTDPVGPAEGLFNKA--FYESCFKALKD 186
Query: 205 EGEQLEQVIQPAAV 218
EG ++Q P A+
Sbjct: 187 EGILVQQSESPLAL 200
>sp|Q0ACK7|SPEE_ALHEH Spermidine synthase OS=Alkalilimnicola ehrlichei (strain MLHE-1)
GN=speE PE=3 SV=1
Length = 286
Score = 33.9 bits (76), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 20/37 (54%)
Query: 145 ANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPV 181
AN DP+ T+ FDD I A L VIV S+ PV
Sbjct: 129 ANDDPRATLLFDDGVAWIQDQPAGSLDVVIVDSTDPV 165
>sp|Q9HM14|XPD_THEAC ATP-dependent DNA helicase Ta0057 OS=Thermoplasma acidophilum
(strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 /
AMRC-C165) GN=Ta0057 PE=1 SV=1
Length = 602
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Query: 1 MSQHLHIDESEVPRMCLELYREHGTTMA---GLKAVGYEFDNDEFHAFVHGKLPYEKLKP 57
M ++ ID+ E+ M + R+HGT A G + G F +E + LP+ +P
Sbjct: 455 MKEYRGIDQKELYSMLKKFRRDHGTIFAVSGGRLSEGINFPGNELEMIILAGLPFP--RP 512
Query: 58 DPVLRNLL 65
D + R+L
Sbjct: 513 DAINRSLF 520
>sp|O06995|PGMB_BACSU Beta-phosphoglucomutase OS=Bacillus subtilis (strain 168) GN=yvdM
PE=1 SV=1
Length = 226
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 70/178 (39%), Gaps = 33/178 (18%)
Query: 36 EFDNDEFHAFVHGK-----LPYEKLKPD---PVLRNLLLSMPQRKI-IFTNADQKHAMEV 86
++ N E +H K + KL P+ P + LL + I I + ++A ++
Sbjct: 63 KYTNAEKQELMHRKNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSRNAPKI 122
Query: 87 LGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIAN 146
L RL + D F I+ P G KP + TA + +
Sbjct: 123 LRRLAIIDDFHAIV---------DPTTLAKG--------------KPDPDIFLTAAAMLD 159
Query: 147 VDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIK-EAIPEIWE 203
V P +D+ I++ K+AG+ V VG P+ AD + ++ E + E WE
Sbjct: 160 VSPADCAAIEDAEAGISAIKSAGMFAVGVGQGQPMLGADLVVRQTSDLTLELLHEEWE 217
>sp|Q4J904|SYR_SULAC Arginine--tRNA ligase OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=argS PE=3 SV=1
Length = 618
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Query: 136 EAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIK 195
+ I ++I D + + +D+ R +A L +++G P P DH I++I
Sbjct: 131 DTISRMLKIRGHDVNRRFYVNDAGRQVA---ILTLGYILLGEPEPSPKVDHWFGLIYSIT 187
Query: 196 EAIPEIWEGEGEQLEQVIQPAAVETAV 222
I EI E + E+L++ + P + +
Sbjct: 188 NVIIEIRELK-EELKKDLDPDTYKDKI 213
>sp|C9SUS0|ENOPH_VERA1 Enolase-phosphatase E1 OS=Verticillium albo-atrum (strain VaMs.102
/ ATCC MYA-4576 / FGSC 10136) GN=UTR4 PE=3 SV=1
Length = 255
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 54/111 (48%), Gaps = 34/111 (30%)
Query: 67 SMPQRKIIF--TNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFS 124
S+P +K++F TNA + ++ F+T+N ++ +E++S++
Sbjct: 139 SVPAQKLLFGHTNASPPSLIPIISD-----------WFDTVNAGMK-------MESSSYT 180
Query: 125 SNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 175
S IL R + P++ +F D+ +++A+AAG+H+++V
Sbjct: 181 S---ILS-----------RYPDTQPQEWLFLSDNVDEVSAARAAGMHSLVV 217
>sp|Q8PFQ4|SPEE_XANAC Spermidine synthase OS=Xanthomonas axonopodis pv. citri (strain
306) GN=speE PE=3 SV=1
Length = 285
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 145 ANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALN 189
+N D + + FDD +A+ +A + VIV S+ PV PA+ N
Sbjct: 129 SNHDARAELLFDDGVAYMANCQAGSVDIVIVDSTDPVGPAEGLFN 173
>sp|Q4R812|GSKIP_MACFA GSK3-beta interaction protein OS=Macaca fascicularis GN=GSKIP
PE=2 SV=1
Length = 139
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 6/40 (15%)
Query: 4 HLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFH 43
+++++ E R CLEL T AGLK VGY+FD + H
Sbjct: 65 YINVETKERNRYCLEL------TEAGLKVVGYDFDQVDDH 98
>sp|Q87F26|SPEE_XYLFT Spermidine synthase OS=Xylella fastidiosa (strain Temecula1 / ATCC
700964) GN=speE PE=3 SV=1
Length = 285
Score = 32.7 bits (73), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 145 ANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEG 204
+N DP+ T+ F D +A + +IV S+ PV PA N E+ +
Sbjct: 129 SNNDPRATLLFSDGVAYMADCPTNSVDVIIVDSTDPVGPAKGLFN--RTFYESCFRALKN 186
Query: 205 EGEQLEQVIQPAAV 218
+G ++Q P A+
Sbjct: 187 DGLLIQQSESPLAL 200
>sp|B2I6M0|SPEE_XYLF2 Spermidine synthase OS=Xylella fastidiosa (strain M23) GN=speE PE=3
SV=1
Length = 285
Score = 32.7 bits (73), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 145 ANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEG 204
+N DP+ T+ F D +A + +IV S+ PV PA N E+ +
Sbjct: 129 SNNDPRATLLFSDGVAYMADCPTNSVDVIIVDSTDPVGPAKGLFN--RTFYESCFRALKN 186
Query: 205 EGEQLEQVIQPAAV 218
+G ++Q P A+
Sbjct: 187 DGLLIQQSESPLAL 200
>sp|P54607|YHCW_BACSU Uncharacterized protein YhcW OS=Bacillus subtilis (strain 168)
GN=yhcW PE=3 SV=1
Length = 220
Score = 32.7 bits (73), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 54/127 (42%), Gaps = 27/127 (21%)
Query: 76 TNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSL 135
+++D K L ++GL D FE I Q AD+ + + KP+
Sbjct: 108 SSSDYKWVSGHLKQIGLFDDFEVI----------QTADDVEEV-------------KPNP 144
Query: 136 EAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSI 191
E A + V P + + F+DS +AK AG+ VIV + V DH L S+
Sbjct: 145 ELYLLAAKNLGVSPAECLAFEDSVNGSIAAKRAGMKCVIVPNKVTGTLMFEDYDHRLESM 204
Query: 192 HNIKEAI 198
++ A+
Sbjct: 205 AEMELAL 211
>sp|Q5PPI3|GSKIP_RAT GSK3-beta interaction protein OS=Rattus norvegicus GN=Gskip PE=2
SV=1
Length = 139
Score = 32.3 bits (72), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 6/40 (15%)
Query: 4 HLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFH 43
+++++ E R CLEL T AGL+ VGY FD E H
Sbjct: 65 YINVETKERNRYCLEL------TEAGLRVVGYAFDQVEDH 98
>sp|Q8P447|SPEE_XANCP Spermidine synthase OS=Xanthomonas campestris pv. campestris
(strain ATCC 33913 / NCPPB 528 / LMG 568) GN=speE PE=3
SV=1
Length = 285
Score = 32.3 bits (72), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 145 ANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEG 204
+N D + + FDD +A+ A + VIV S+ PV PA+ N + E+ + +
Sbjct: 129 SNDDARAELLFDDGVAYMANCPAGSVDIVIVDSTDPVGPAEGLFNK--SFYESCFKALKD 186
Query: 205 EGEQLEQVIQPAAV 218
+G ++Q P A+
Sbjct: 187 DGILVQQSESPLAL 200
>sp|B0RXN7|SPEE_XANCB Spermidine synthase OS=Xanthomonas campestris pv. campestris
(strain B100) GN=speE PE=3 SV=1
Length = 285
Score = 32.3 bits (72), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 145 ANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEG 204
+N D + + FDD +A+ A + VIV S+ PV PA+ N + E+ + +
Sbjct: 129 SNDDARAELLFDDGVAYMANCPAGSVDIVIVDSTDPVGPAEGLFNK--SFYESCFKALKD 186
Query: 205 EGEQLEQVIQPAAV 218
+G ++Q P A+
Sbjct: 187 DGILVQQSESPLAL 200
>sp|Q4UPN0|SPEE_XANC8 Spermidine synthase OS=Xanthomonas campestris pv. campestris
(strain 8004) GN=speE PE=3 SV=1
Length = 285
Score = 32.3 bits (72), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 145 ANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEG 204
+N D + + FDD +A+ A + VIV S+ PV PA+ N + E+ + +
Sbjct: 129 SNDDARAELLFDDGVAYMANCPAGSVDIVIVDSTDPVGPAEGLFNK--SFYESCFKALKD 186
Query: 205 EGEQLEQVIQPAAV 218
+G ++Q P A+
Sbjct: 187 DGILVQQSESPLAL 200
>sp|Q8DIA7|PURL_THEEB Phosphoribosylformylglycinamidine synthase 2 OS=Thermosynechococcus
elongatus (strain BP-1) GN=purL PE=3 SV=1
Length = 761
Score = 32.3 bits (72), Expect = 2.7, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 12/83 (14%)
Query: 25 TTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHA- 83
+ MA VG E D D+ G +PYE LLS Q +++F A + A
Sbjct: 278 SEMAAKGGVGIELDLDKVPVREQGMVPYE----------FLLSESQERMLFVAAQGREAE 327
Query: 84 -MEVLGRLGLEDCFEGIICFETI 105
+E+ R GL+ G + E +
Sbjct: 328 LIEIFQRWGLQAVVVGRVIAEPL 350
>sp|Q5H6E7|SPEE_XANOR Spermidine synthase OS=Xanthomonas oryzae pv. oryzae (strain
KACC10331 / KXO85) GN=speE PE=3 SV=1
Length = 285
Score = 32.3 bits (72), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 145 ANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALN 189
+N D + + FDD +A+ A + VIV S+ PV PA+ N
Sbjct: 129 SNHDARAELLFDDGVAYMANCPAGSVDIVIVDSTDPVGPAEGLFN 173
>sp|B2SHF6|SPEE_XANOP Spermidine synthase OS=Xanthomonas oryzae pv. oryzae (strain
PXO99A) GN=speE PE=3 SV=1
Length = 285
Score = 32.3 bits (72), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 145 ANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALN 189
+N D + + FDD +A+ A + VIV S+ PV PA+ N
Sbjct: 129 SNHDARAELLFDDGVAYMANCPAGSVDIVIVDSTDPVGPAEGLFN 173
>sp|Q2P928|SPEE_XANOM Spermidine synthase OS=Xanthomonas oryzae pv. oryzae (strain MAFF
311018) GN=speE PE=3 SV=1
Length = 285
Score = 32.3 bits (72), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 145 ANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALN 189
+N D + + FDD +A+ A + VIV S+ PV PA+ N
Sbjct: 129 SNHDARAELLFDDGVAYMANCPAGSVDIVIVDSTDPVGPAEGLFN 173
>sp|Q8BGR8|GSKIP_MOUSE GSK3-beta interaction protein OS=Mus musculus GN=Gskip PE=2 SV=1
Length = 139
Score = 32.3 bits (72), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 6/40 (15%)
Query: 4 HLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFH 43
+++++ E R CLEL T AGL+ VGY FD E H
Sbjct: 65 YINVETKERNRYCLEL------TEAGLRVVGYAFDQVEDH 98
>sp|Q9JTP5|GPH_NEIMA Phosphoglycolate phosphatase OS=Neisseria meningitidis serogroup A
/ serotype 4A (strain Z2491) GN=gph PE=3 SV=1
Length = 235
Score = 32.0 bits (71), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 23/112 (20%)
Query: 64 LLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSF 123
LL S+ + TN ++ A E+L +LGL D F I+ +++ +
Sbjct: 107 LLKSLGIPLAVITNKNEILAAELLKQLGLADYFSLILGGDSLPEK--------------- 151
Query: 124 SSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 175
KPS + A + +D + DS +I +AKAAG +V V
Sbjct: 152 --------KPSPLPLRHAAEVLGIDVANMVMVGDSRNDIIAAKAAGCLSVGV 195
>sp|Q9P0R6|GSKIP_HUMAN GSK3-beta interaction protein OS=Homo sapiens GN=GSKIP PE=1 SV=2
Length = 139
Score = 32.0 bits (71), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 6/40 (15%)
Query: 4 HLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFH 43
+++++ E R CLEL T AGLK VGY FD + H
Sbjct: 65 YINVETKERNRYCLEL------TEAGLKVVGYAFDQVDDH 98
>sp|B0U1H5|SPEE_XYLFM Spermidine synthase OS=Xylella fastidiosa (strain M12) GN=speE PE=3
SV=1
Length = 285
Score = 32.0 bits (71), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 145 ANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEG 204
+N DP+ T+ F D +A + +IV S+ P+ PA N E+ +
Sbjct: 129 SNNDPRATLLFSDGVAYMADCPTNSVDVIIVDSTDPIGPAKGLFN--RTFYESCFRALKN 186
Query: 205 EGEQLEQVIQPAAV 218
+G ++Q P A+
Sbjct: 187 DGLLIQQSESPLAL 200
>sp|Q9S586|GPH1_PSEAE Phosphoglycolate phosphatase 1 OS=Pseudomonas aeruginosa (strain
ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=gph1
PE=3 SV=1
Length = 272
Score = 31.6 bits (70), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLH--TVIVGSSVPVPPADHALN 189
KP A+ +++A ++P+ +F DS ++ +AKAAG+ + G + P A+ A
Sbjct: 157 KPDPAALLFVMKMAGIEPEDALFVGDSRNDVLAAKAAGVRCAALTYGYNHGRPIAEEAPT 216
Query: 190 -SIHNIKEAIP 199
I N+++ +P
Sbjct: 217 LVIDNLRDLLP 227
>sp|B4SM23|SPEE_STRM5 Spermidine synthase OS=Stenotrophomonas maltophilia (strain R551-3)
GN=speE PE=3 SV=1
Length = 283
Score = 31.2 bits (69), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 145 ANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALN 189
+N D + + FDD +A+ A + VIV S+ PV P + N
Sbjct: 129 SNDDARAELLFDDGVAYMANCPAGSVDVVIVDSTDPVGPGEGLFN 173
>sp|B2FKR1|SPEE_STRMK Spermidine synthase OS=Stenotrophomonas maltophilia (strain K279a)
GN=speE PE=3 SV=1
Length = 283
Score = 31.2 bits (69), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 145 ANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALN 189
+N D + + FDD +A+ A + VIV S+ PV P + N
Sbjct: 129 SNDDARAELLFDDGVAYMANCPAGSVDVVIVDSTDPVGPGEGLFN 173
>sp|O80934|Y2766_ARATH Uncharacterized protein At2g37660, chloroplastic OS=Arabidopsis
thaliana GN=At2g37660 PE=1 SV=2
Length = 325
Score = 31.2 bits (69), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 26/99 (26%)
Query: 133 PSLEAIETAIRIANV--------DPKKT----IFFDDSA-----------RNIASAKAAG 169
P++E I+ + + + DP K FFDD A I +AKAAG
Sbjct: 137 PAVEGIDALVILTSAVPQMKPGFDPSKGGRPEFFFDDGAYPEQVDWIGQKNQIDAAKAAG 196
Query: 170 LHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEGEGEQ 208
+ +++ S+ +H LNSI N A +W+ + EQ
Sbjct: 197 VKQIVLVGSMGGTNINHPLNSIGN---ANILVWKRKAEQ 232
>sp|P95649|CBBY_RHOSH Protein CbbY OS=Rhodobacter sphaeroides GN=cbbY PE=3 SV=1
Length = 230
Score = 31.2 bits (69), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVI 174
KPS + A+R +V P++ + +DS + +AK AGL ++
Sbjct: 151 KPSPDIYRLALRELDVPPERAVALEDSLNGLRAAKGAGLRCIV 193
>sp|Q0P5A3|GSKIP_BOVIN GSK3-beta interaction protein OS=Bos taurus GN=GSKIP PE=2 SV=1
Length = 139
Score = 31.2 bits (69), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 6/40 (15%)
Query: 4 HLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFH 43
+++++ E R CLEL T AGL+ VGY FD + H
Sbjct: 65 YINVETRERNRYCLEL------TEAGLRVVGYAFDQVDDH 98
>sp|Q9HZ62|GPH2_PSEAE Phosphoglycolate phosphatase 2 OS=Pseudomonas aeruginosa (strain
ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=gph2
PE=3 SV=1
Length = 226
Score = 31.2 bits (69), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 175
KP E + A +DP + +F D R+I S + AG T V
Sbjct: 146 KPDPEPLLLACSQLGIDPSRVLFIGDDLRDIESGRDAGTKTAAV 189
>sp|Q8ZZB0|CBID_PYRAE Putative cobalt-precorrin-6A synthase [deacetylating]
OS=Pyrobaculum aerophilum (strain ATCC 51768 / IM2 / DSM
7523 / JCM 9630 / NBRC 100827) GN=cbiD PE=3 SV=1
Length = 340
Score = 30.8 bits (68), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Query: 178 SVPVPPADHALNSI--HNIKEAIPEIWEG 204
+PVPP +HA+N + I+EA+ E+ EG
Sbjct: 104 GLPVPPGEHAINPVPRRMIEEAVREVLEG 132
>sp|O14165|YDX1_SCHPO Uncharacterized protein C4C5.01 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC4C5.01 PE=3 SV=2
Length = 249
Score = 30.8 bits (68), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 149 PKKTIFFDDSARNIASAKAAGLHTVIV 175
P + I F+DS + SAKAAG+H + V
Sbjct: 180 PSQCIAFEDSIPGVKSAKAAGMHVIWV 206
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,364,403
Number of Sequences: 539616
Number of extensions: 3575144
Number of successful extensions: 9138
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 9094
Number of HSP's gapped (non-prelim): 60
length of query: 224
length of database: 191,569,459
effective HSP length: 113
effective length of query: 111
effective length of database: 130,592,851
effective search space: 14495806461
effective search space used: 14495806461
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)