Query 027403
Match_columns 224
No_of_seqs 110 out of 1677
Neff 6.9
Searched_HMMs 46136
Date Fri Mar 29 09:26:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027403.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027403hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3109 Haloacid dehalogenase- 100.0 2.2E-30 4.8E-35 217.2 13.1 189 1-206 45-235 (244)
2 TIGR01993 Pyr-5-nucltdase pyri 99.9 3.2E-22 7E-27 164.5 14.8 153 3-175 32-184 (184)
3 TIGR01422 phosphonatase phosph 99.9 3E-21 6.5E-26 166.5 13.8 123 53-198 96-252 (253)
4 PRK13288 pyrophosphatase PpaX; 99.9 5.2E-21 1.1E-25 160.8 14.4 124 53-199 79-211 (214)
5 PLN03243 haloacid dehalogenase 99.9 1.8E-20 3.9E-25 163.6 16.4 143 53-219 106-254 (260)
6 TIGR01449 PGP_bact 2-phosphogl 99.9 2.2E-20 4.7E-25 156.0 15.9 121 54-197 83-212 (213)
7 PRK10563 6-phosphogluconate ph 99.9 8.1E-21 1.8E-25 160.2 13.1 142 33-197 62-211 (221)
8 COG0546 Gph Predicted phosphat 99.9 1.8E-20 3.9E-25 159.3 14.8 122 55-199 88-218 (220)
9 PLN02770 haloacid dehalogenase 99.8 1.3E-20 2.8E-25 162.8 13.5 120 53-195 105-232 (248)
10 TIGR01454 AHBA_synth_RP 3-amin 99.8 4.2E-20 9.1E-25 154.3 16.0 124 53-199 72-204 (205)
11 PRK09449 dUMP phosphatase; Pro 99.8 2.9E-20 6.2E-25 157.0 14.7 122 54-198 93-222 (224)
12 TIGR03351 PhnX-like phosphonat 99.8 3.2E-20 6.9E-25 156.3 14.7 123 53-198 84-219 (220)
13 PRK13478 phosphonoacetaldehyde 99.8 3.8E-20 8.2E-25 161.2 15.3 125 53-200 98-256 (267)
14 PRK13226 phosphoglycolate phos 99.8 8.1E-20 1.8E-24 155.9 15.2 122 54-198 93-224 (229)
15 COG1011 Predicted hydrolase (H 99.8 4.3E-20 9.3E-25 155.5 12.9 124 54-200 97-228 (229)
16 TIGR02254 YjjG/YfnB HAD superf 99.8 8.2E-20 1.8E-24 153.3 14.5 122 54-198 95-224 (224)
17 TIGR02253 CTE7 HAD superfamily 99.8 8.7E-20 1.9E-24 153.4 14.6 119 53-194 91-220 (221)
18 PRK14988 GMP/IMP nucleotidase; 99.8 9.2E-20 2E-24 155.5 14.7 127 53-202 90-222 (224)
19 PLN02575 haloacid dehalogenase 99.8 2.8E-19 6E-24 163.4 17.0 131 53-206 213-350 (381)
20 PLN02940 riboflavin kinase 99.8 2.1E-19 4.6E-24 164.8 14.1 166 3-196 38-218 (382)
21 TIGR01428 HAD_type_II 2-haloal 99.8 3E-19 6.6E-24 148.2 13.3 103 54-179 90-195 (198)
22 PRK11587 putative phosphatase; 99.8 4.1E-19 8.8E-24 150.1 13.4 119 53-195 80-204 (218)
23 PRK10826 2-deoxyglucose-6-phos 99.8 4.8E-19 1E-23 149.8 12.4 121 53-196 89-217 (222)
24 PRK13225 phosphoglycolate phos 99.8 1.9E-18 4.1E-23 151.9 16.6 125 53-203 139-272 (273)
25 PRK13223 phosphoglycolate phos 99.8 2E-18 4.2E-23 151.4 15.8 124 54-200 99-231 (272)
26 PRK13222 phosphoglycolate phos 99.8 2.8E-18 6E-23 144.3 15.2 124 54-200 91-223 (226)
27 COG0637 Predicted phosphatase/ 99.8 1E-18 2.3E-23 148.9 12.6 124 52-198 82-216 (221)
28 PLN02811 hydrolase 99.8 1.4E-18 3E-23 147.2 11.3 120 54-196 76-208 (220)
29 PRK10748 flavin mononucleotide 99.8 1.8E-18 3.9E-23 148.5 11.7 117 54-198 111-238 (238)
30 PRK10725 fructose-1-P/6-phosph 99.8 3E-18 6.5E-23 140.6 12.1 100 53-176 85-186 (188)
31 PF13419 HAD_2: Haloacid dehal 99.8 1.3E-18 2.7E-23 138.7 8.0 100 53-175 74-176 (176)
32 PRK06769 hypothetical protein; 99.7 6.3E-18 1.4E-22 138.9 10.3 122 54-198 26-171 (173)
33 TIGR01990 bPGM beta-phosphoglu 99.7 1E-17 2.2E-22 136.8 11.1 98 54-176 85-185 (185)
34 TIGR00213 GmhB_yaeD D,D-heptos 99.7 1.6E-17 3.4E-22 136.5 11.6 128 54-195 24-175 (176)
35 PRK09456 ?-D-glucose-1-phospha 99.7 1.5E-17 3.3E-22 138.7 11.4 120 33-179 65-188 (199)
36 PRK08942 D,D-heptose 1,7-bisph 99.7 3.4E-17 7.3E-22 134.9 13.1 121 54-199 27-177 (181)
37 PRK06698 bifunctional 5'-methy 99.7 4.5E-17 9.7E-22 152.4 14.2 123 53-201 327-456 (459)
38 TIGR01509 HAD-SF-IA-v3 haloaci 99.7 2.1E-17 4.6E-22 134.1 9.9 97 55-175 84-183 (183)
39 PLN02779 haloacid dehalogenase 99.7 6.5E-17 1.4E-21 142.9 12.5 121 54-197 142-271 (286)
40 TIGR02009 PGMB-YQAB-SF beta-ph 99.7 5.3E-17 1.1E-21 132.6 9.5 98 53-175 85-185 (185)
41 TIGR02252 DREG-2 REG-2-like, H 99.7 6.9E-17 1.5E-21 134.4 10.4 97 54-174 103-203 (203)
42 TIGR02247 HAD-1A3-hyp Epoxide 99.7 1.7E-16 3.6E-21 133.0 11.4 102 54-178 92-198 (211)
43 PHA02597 30.2 hypothetical pro 99.7 1.5E-16 3.3E-21 132.0 10.6 116 53-196 71-196 (197)
44 PLN02919 haloacid dehalogenase 99.7 5E-16 1.1E-20 158.0 15.5 118 55-195 160-286 (1057)
45 TIGR01656 Histidinol-ppas hist 99.6 4E-16 8.8E-21 124.7 8.3 101 55-178 26-147 (147)
46 TIGR01261 hisB_Nterm histidino 99.6 8.1E-16 1.8E-20 125.4 9.3 101 54-179 27-150 (161)
47 TIGR01493 HAD-SF-IA-v2 Haloaci 99.6 4.7E-16 1E-20 126.3 7.6 88 54-168 88-175 (175)
48 TIGR01691 enolase-ppase 2,3-di 99.6 2.3E-15 5E-20 128.7 10.5 102 54-180 93-200 (220)
49 TIGR01685 MDP-1 magnesium-depe 99.6 1.1E-15 2.3E-20 126.3 6.8 104 53-179 42-160 (174)
50 TIGR01662 HAD-SF-IIIA HAD-supe 99.6 1.1E-14 2.5E-19 113.5 9.9 95 55-176 24-131 (132)
51 TIGR01548 HAD-SF-IA-hyp1 haloa 99.5 2.5E-14 5.3E-19 119.0 9.7 89 56-168 106-197 (197)
52 KOG3085 Predicted hydrolase (H 99.5 1.3E-14 2.9E-19 124.7 6.6 102 54-179 111-216 (237)
53 TIGR01549 HAD-SF-IA-v1 haloaci 99.5 3.9E-14 8.4E-19 112.8 8.7 90 54-169 62-154 (154)
54 TIGR01668 YqeG_hyp_ppase HAD s 99.5 2.5E-13 5.5E-18 111.3 11.7 96 53-180 40-140 (170)
55 TIGR01458 HAD-SF-IIA-hyp3 HAD- 99.5 4.1E-14 8.9E-19 123.2 6.4 122 57-198 121-254 (257)
56 TIGR00338 serB phosphoserine p 99.5 2.3E-13 5E-18 114.4 10.4 130 54-196 83-217 (219)
57 TIGR01664 DNA-3'-Pase DNA 3'-p 99.5 1.7E-13 3.7E-18 112.2 8.0 94 57-175 43-161 (166)
58 PF13242 Hydrolase_like: HAD-h 99.4 4.6E-13 1E-17 95.4 8.0 64 131-194 3-75 (75)
59 KOG2914 Predicted haloacid-hal 99.4 1E-12 2.2E-17 112.3 11.3 136 35-193 69-217 (222)
60 PHA02530 pseT polynucleotide k 99.4 5.1E-13 1.1E-17 117.8 8.7 109 55-179 186-299 (300)
61 PRK05446 imidazole glycerol-ph 99.4 1.5E-12 3.3E-17 118.3 10.9 100 53-177 27-149 (354)
62 PRK09552 mtnX 2-hydroxy-3-keto 99.4 3.1E-12 6.6E-17 108.4 11.5 125 54-204 72-218 (219)
63 smart00577 CPDc catalytic doma 99.4 3.3E-13 7.1E-18 108.2 4.9 92 55-172 44-138 (148)
64 cd01427 HAD_like Haloacid deha 99.4 2.9E-12 6.4E-17 97.2 8.8 116 53-175 21-139 (139)
65 TIGR01452 PGP_euk phosphoglyco 99.4 4.7E-13 1E-17 117.6 4.4 118 57-194 144-279 (279)
66 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.4 6.3E-12 1.4E-16 103.6 10.7 111 54-179 78-193 (201)
67 TIGR01670 YrbI-phosphatas 3-de 99.3 5E-12 1.1E-16 102.0 9.3 112 62-206 37-153 (154)
68 PRK13582 thrH phosphoserine ph 99.3 2E-11 4.3E-16 101.5 13.0 140 37-202 55-199 (205)
69 COG0647 NagD Predicted sugar p 99.3 3.2E-12 6.9E-17 112.2 7.5 149 53-201 21-268 (269)
70 PLN02954 phosphoserine phospha 99.3 1.6E-11 3.5E-16 103.5 11.6 131 55-198 83-223 (224)
71 TIGR01672 AphA HAD superfamily 99.3 2E-11 4.4E-16 105.5 12.2 109 41-180 100-215 (237)
72 PLN02645 phosphoglycolate phos 99.3 3E-12 6.5E-17 114.4 6.9 110 70-199 187-308 (311)
73 TIGR01457 HAD-SF-IIA-hyp2 HAD- 99.3 1E-11 2.2E-16 107.7 8.0 69 126-194 172-249 (249)
74 COG0241 HisB Histidinol phosph 99.3 9.9E-11 2.1E-15 97.1 13.0 125 53-197 28-175 (181)
75 TIGR01681 HAD-SF-IIIC HAD-supe 99.3 7.9E-12 1.7E-16 97.9 5.7 85 56-167 29-126 (128)
76 PRK11009 aphA acid phosphatase 99.3 9.6E-11 2.1E-15 101.3 13.0 110 38-180 97-215 (237)
77 TIGR02137 HSK-PSP phosphoserin 99.2 1E-10 2.2E-15 98.8 11.1 141 36-201 54-198 (203)
78 PRK11133 serB phosphoserine ph 99.2 5.4E-11 1.2E-15 107.1 9.3 121 54-195 179-309 (322)
79 TIGR02726 phenyl_P_delta pheny 99.2 5.7E-11 1.2E-15 97.7 8.6 111 62-205 43-158 (169)
80 PRK09484 3-deoxy-D-manno-octul 99.2 8.4E-11 1.8E-15 97.4 8.9 104 63-199 58-169 (183)
81 TIGR03333 salvage_mtnX 2-hydro 99.2 6E-11 1.3E-15 100.2 8.2 125 54-203 68-213 (214)
82 TIGR01489 DKMTPPase-SF 2,3-dik 99.2 1.6E-10 3.4E-15 94.2 10.0 124 35-171 57-184 (188)
83 COG2179 Predicted hydrolase of 99.1 2.7E-10 5.8E-15 92.8 8.1 94 52-177 42-139 (175)
84 TIGR01459 HAD-SF-IIA-hyp4 HAD- 99.1 8.8E-11 1.9E-15 101.0 4.2 97 58-177 140-242 (242)
85 PRK10444 UMP phosphatase; Prov 99.0 1.4E-09 3.1E-14 94.4 8.6 70 125-194 167-245 (248)
86 PF00702 Hydrolase: haloacid d 99.0 8.5E-10 1.8E-14 91.3 6.4 87 55-169 126-215 (215)
87 TIGR01686 FkbH FkbH-like domai 99.0 1.8E-09 3.8E-14 96.9 8.0 88 56-171 31-125 (320)
88 TIGR01544 HAD-SF-IE haloacid d 98.9 8.8E-09 1.9E-13 90.9 11.7 114 34-168 103-230 (277)
89 TIGR01663 PNK-3'Pase polynucle 98.9 2.4E-09 5.2E-14 102.0 8.0 89 57-170 198-305 (526)
90 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.9 7.7E-09 1.7E-13 85.7 7.8 129 35-176 65-198 (202)
91 TIGR02244 HAD-IG-Ncltidse HAD 98.9 1.2E-08 2.5E-13 92.7 9.5 123 54-177 182-324 (343)
92 TIGR01488 HAD-SF-IB Haloacid D 98.8 2.7E-08 5.8E-13 80.4 8.0 104 54-168 71-177 (177)
93 TIGR01456 CECR5 HAD-superfamil 98.7 3.9E-08 8.6E-13 88.3 8.6 71 128-198 229-320 (321)
94 KOG2882 p-Nitrophenyl phosphat 98.7 2E-08 4.3E-13 88.7 4.5 71 128-198 220-303 (306)
95 TIGR01512 ATPase-IB2_Cd heavy 98.6 1.4E-07 3E-12 90.3 9.8 109 55-198 361-478 (536)
96 TIGR02251 HIF-SF_euk Dullard-l 98.6 1.2E-08 2.6E-13 83.1 2.1 96 55-176 41-139 (162)
97 PTZ00445 p36-lilke protein; Pr 98.6 1.3E-07 2.8E-12 80.2 8.2 110 57-178 76-207 (219)
98 TIGR01459 HAD-SF-IIA-hyp4 HAD- 98.6 2.5E-07 5.4E-12 79.6 9.6 90 53-170 21-116 (242)
99 KOG3040 Predicted sugar phosph 98.6 9.2E-08 2E-12 80.8 5.9 73 128-200 177-258 (262)
100 TIGR01525 ATPase-IB_hvy heavy 98.5 5.3E-07 1.2E-11 86.6 10.4 107 55-198 383-499 (556)
101 TIGR01460 HAD-SF-IIA Haloacid 98.5 2.1E-07 4.5E-12 80.0 5.8 50 129-178 185-236 (236)
102 PRK08238 hypothetical protein; 98.5 1.2E-06 2.7E-11 82.9 10.5 100 50-179 66-168 (479)
103 TIGR01511 ATPase-IB1_Cu copper 98.4 1.4E-06 2.9E-11 84.0 10.1 107 56-198 405-518 (562)
104 PF12689 Acid_PPase: Acid Phos 98.4 1E-06 2.2E-11 72.5 7.8 99 53-179 42-154 (169)
105 COG4229 Predicted enolase-phos 98.4 1E-05 2.2E-10 67.2 13.0 113 55-192 102-224 (229)
106 COG0560 SerB Phosphoserine pho 98.4 1.6E-06 3.4E-11 73.8 8.3 123 55-190 76-201 (212)
107 PF06888 Put_Phosphatase: Puta 98.4 9.8E-06 2.1E-10 70.0 13.1 132 36-179 57-200 (234)
108 PF08645 PNK3P: Polynucleotide 98.2 2.3E-06 4.9E-11 69.7 5.7 95 54-173 26-153 (159)
109 PF09419 PGP_phosphatase: Mito 98.2 7.1E-06 1.5E-10 67.5 8.1 94 53-179 56-167 (168)
110 PRK10671 copA copper exporting 98.2 1E-05 2.2E-10 81.3 10.8 109 56-199 650-765 (834)
111 TIGR01522 ATPase-IIA2_Ca golgi 98.2 8.5E-06 1.8E-10 82.4 10.2 134 56-199 528-671 (884)
112 COG1778 Low specificity phosph 98.1 4.4E-06 9.6E-11 67.7 5.8 94 62-188 44-139 (170)
113 PRK10530 pyridoxal phosphate ( 98.1 1.5E-05 3.2E-10 68.8 9.2 69 132-201 198-270 (272)
114 TIGR00685 T6PP trehalose-phosp 97.9 3.3E-05 7.2E-10 66.6 7.4 67 135-201 169-242 (244)
115 TIGR01533 lipo_e_P4 5'-nucleot 97.9 0.00012 2.5E-09 64.5 10.1 98 35-166 101-205 (266)
116 PRK01158 phosphoglycolate phos 97.8 9.1E-05 2E-09 62.4 7.9 69 131-200 155-227 (230)
117 TIGR01482 SPP-subfamily Sucros 97.7 0.00012 2.6E-09 61.4 7.4 59 131-190 147-207 (225)
118 PF05761 5_nucleotid: 5' nucle 97.6 0.00012 2.5E-09 68.9 5.9 126 53-178 180-326 (448)
119 KOG3120 Predicted haloacid deh 97.6 0.00018 4E-09 61.5 6.2 133 35-180 69-214 (256)
120 COG4087 Soluble P-type ATPase 97.6 0.00067 1.5E-08 53.7 8.9 116 53-200 27-148 (152)
121 PRK11033 zntA zinc/cadmium/mer 97.6 0.00058 1.3E-08 68.1 10.7 104 56-198 568-680 (741)
122 TIGR02250 FCP1_euk FCP1-like p 97.5 0.00022 4.7E-09 57.9 6.3 79 54-160 56-138 (156)
123 TIGR01487 SPP-like sucrose-pho 97.5 0.00036 7.8E-09 58.5 6.9 57 132-189 146-204 (215)
124 TIGR01116 ATPase-IIA1_Ca sarco 97.5 0.00044 9.5E-09 70.4 8.6 136 56-199 537-683 (917)
125 COG4359 Uncharacterized conser 97.4 0.00076 1.6E-08 56.3 8.2 138 53-205 70-218 (220)
126 PF12710 HAD: haloacid dehalog 97.4 0.00041 8.8E-09 56.4 6.2 95 59-166 92-192 (192)
127 TIGR01684 viral_ppase viral ph 97.4 0.00027 5.9E-09 62.9 5.2 101 58-159 148-260 (301)
128 PLN02645 phosphoglycolate phos 97.3 0.0008 1.7E-08 60.2 7.2 88 55-174 43-136 (311)
129 TIGR01485 SPP_plant-cyano sucr 97.2 0.0022 4.7E-08 55.2 9.0 49 131-179 165-213 (249)
130 KOG1615 Phosphoserine phosphat 97.2 0.00095 2.1E-08 56.2 6.4 102 53-167 85-191 (227)
131 TIGR02463 MPGP_rel mannosyl-3- 97.2 0.0019 4.2E-08 54.2 8.1 40 133-172 179-218 (221)
132 PHA03398 viral phosphatase sup 97.0 0.0025 5.5E-08 56.9 7.3 101 58-159 150-262 (303)
133 PRK00192 mannosyl-3-phosphogly 96.9 0.0082 1.8E-07 52.3 10.1 70 133-203 190-271 (273)
134 PF06941 NT5C: 5' nucleotidase 96.9 0.0013 2.9E-08 54.4 4.7 118 41-200 58-187 (191)
135 KOG2630 Enolase-phosphatase E- 96.8 0.0056 1.2E-07 52.7 7.7 115 56-195 123-249 (254)
136 PRK10513 sugar phosphate phosp 96.7 0.0035 7.6E-08 54.1 5.6 71 131-202 194-268 (270)
137 TIGR01497 kdpB K+-transporting 96.6 0.013 2.8E-07 58.0 9.4 108 56-198 446-560 (675)
138 PRK10187 trehalose-6-phosphate 96.6 0.016 3.4E-07 50.8 9.0 72 131-204 172-246 (266)
139 PRK11590 hypothetical protein; 96.5 0.02 4.3E-07 48.1 9.1 100 55-172 94-199 (211)
140 PRK14010 potassium-transportin 96.5 0.02 4.4E-07 56.6 10.3 108 56-198 441-555 (673)
141 TIGR02471 sucr_syn_bact_C sucr 96.4 0.0085 1.8E-07 51.0 6.3 49 131-180 157-205 (236)
142 COG2217 ZntA Cation transport 96.4 0.015 3.3E-07 57.8 8.8 108 56-198 537-651 (713)
143 TIGR01484 HAD-SF-IIB HAD-super 96.4 0.005 1.1E-07 50.9 4.6 45 128-172 158-202 (204)
144 PRK10976 putative hydrolase; P 96.3 0.007 1.5E-07 52.2 5.5 70 131-201 188-263 (266)
145 PF13344 Hydrolase_6: Haloacid 96.1 0.007 1.5E-07 45.4 3.8 52 54-105 12-69 (101)
146 PRK15126 thiamin pyrimidine py 96.1 0.008 1.7E-07 52.2 4.5 71 132-203 187-263 (272)
147 PRK01122 potassium-transportin 96.0 0.05 1.1E-06 53.9 9.9 108 56-198 445-559 (679)
148 TIGR01545 YfhB_g-proteo haloac 95.9 0.078 1.7E-06 44.8 9.7 99 55-172 93-198 (210)
149 PF03031 NIF: NLI interacting 95.9 0.0023 5.1E-08 51.1 0.4 81 55-161 35-118 (159)
150 TIGR00099 Cof-subfamily Cof su 95.9 0.0094 2E-07 51.2 4.1 59 131-190 186-246 (256)
151 TIGR01647 ATPase-IIIA_H plasma 95.8 0.029 6.3E-07 56.2 7.6 139 56-199 442-587 (755)
152 PRK10517 magnesium-transportin 95.7 0.027 5.8E-07 57.5 7.3 134 56-199 550-690 (902)
153 PRK15122 magnesium-transportin 95.7 0.029 6.3E-07 57.3 7.3 134 56-199 550-690 (903)
154 COG5610 Predicted hydrolase (H 95.7 0.026 5.6E-07 53.2 6.3 116 37-175 78-201 (635)
155 TIGR01524 ATPase-IIIB_Mg magne 95.7 0.067 1.4E-06 54.4 9.7 134 56-199 515-655 (867)
156 KOG2470 Similar to IMP-GMP spe 95.7 0.018 4E-07 52.5 5.0 121 55-177 239-376 (510)
157 TIGR01675 plant-AP plant acid 95.5 0.12 2.5E-06 44.7 9.3 100 53-178 117-224 (229)
158 TIGR01517 ATPase-IIB_Ca plasma 95.4 0.08 1.7E-06 54.3 9.2 136 56-199 579-722 (941)
159 PF08282 Hydrolase_3: haloacid 95.3 0.024 5.2E-07 47.2 4.3 61 132-193 185-247 (254)
160 PLN02887 hydrolase family prot 95.2 0.037 8E-07 53.9 6.0 57 133-190 507-565 (580)
161 TIGR01452 PGP_euk phosphoglyco 95.2 0.14 3.1E-06 44.8 9.1 86 55-173 17-108 (279)
162 COG4996 Predicted phosphatase 95.1 0.03 6.6E-07 44.5 4.0 82 55-166 40-133 (164)
163 KOG2961 Predicted hydrolase (H 95.1 0.11 2.5E-06 42.3 7.4 97 53-180 58-171 (190)
164 TIGR01523 ATPase-IID_K-Na pota 94.9 0.15 3.2E-06 53.1 9.6 135 56-198 646-798 (1053)
165 PRK14501 putative bifunctional 94.7 0.097 2.1E-06 52.1 7.4 67 132-202 656-724 (726)
166 PRK03669 mannosyl-3-phosphogly 94.6 0.17 3.7E-06 44.0 7.9 71 131-202 185-268 (271)
167 TIGR01658 EYA-cons_domain eyes 94.1 0.33 7.2E-06 42.4 8.3 81 72-179 178-260 (274)
168 PF11019 DUF2608: Protein of u 94.0 1.1 2.4E-05 39.1 11.7 120 57-180 82-213 (252)
169 TIGR01106 ATPase-IIC_X-K sodiu 94.0 0.25 5.5E-06 51.0 8.9 138 56-199 568-737 (997)
170 COG3700 AphA Acid phosphatase 94.0 0.075 1.6E-06 44.4 4.1 43 132-178 169-213 (237)
171 PLN02580 trehalose-phosphatase 93.8 0.3 6.6E-06 45.3 8.2 70 133-203 301-378 (384)
172 COG0561 Cof Predicted hydrolas 93.7 0.17 3.7E-06 43.5 6.0 72 130-202 186-261 (264)
173 TIGR01486 HAD-SF-IIB-MPGP mann 93.4 0.14 3E-06 44.1 5.0 48 131-179 174-223 (256)
174 TIGR01680 Veg_Stor_Prot vegeta 92.6 0.95 2.1E-05 40.1 9.0 102 53-178 142-251 (275)
175 COG2503 Predicted secreted aci 92.5 0.63 1.4E-05 40.7 7.6 96 34-163 104-207 (274)
176 KOG0207 Cation transport ATPas 92.5 0.94 2E-05 46.1 9.8 103 61-198 731-837 (951)
177 PLN02205 alpha,alpha-trehalose 92.2 0.63 1.4E-05 47.4 8.4 72 132-205 761-848 (854)
178 KOG3107 Predicted haloacid deh 92.1 1.3 2.9E-05 41.0 9.4 79 72-178 373-453 (468)
179 TIGR02461 osmo_MPG_phos mannos 91.6 0.29 6.3E-06 41.7 4.6 39 134-172 182-222 (225)
180 PLN02382 probable sucrose-phos 91.2 0.4 8.6E-06 44.8 5.3 49 132-180 174-225 (413)
181 PF05152 DUF705: Protein of un 90.9 1 2.2E-05 40.2 7.3 103 56-159 142-256 (297)
182 PF05116 S6PP: Sucrose-6F-phos 90.9 0.39 8.5E-06 41.5 4.8 48 131-179 163-210 (247)
183 COG0474 MgtA Cation transport 90.3 0.95 2.1E-05 46.5 7.6 136 56-198 547-691 (917)
184 TIGR01494 ATPase_P-type ATPase 90.2 1.8 3.9E-05 41.1 9.0 102 56-198 347-453 (499)
185 COG5663 Uncharacterized conser 89.9 0.38 8.2E-06 39.8 3.5 135 36-205 50-193 (194)
186 TIGR01657 P-ATPase-V P-type AT 89.7 3.3 7.1E-05 43.3 11.1 38 56-93 656-696 (1054)
187 PF03767 Acid_phosphat_B: HAD 88.9 0.16 3.5E-06 43.6 0.7 92 55-168 114-211 (229)
188 TIGR02245 HAD_IIID1 HAD-superf 88.7 1.5 3.3E-05 36.9 6.4 39 55-93 44-84 (195)
189 TIGR01652 ATPase-Plipid phosph 87.5 1.4 3E-05 46.0 6.6 49 149-198 768-819 (1057)
190 smart00775 LNS2 LNS2 domain. T 87.3 5.7 0.00012 31.9 8.8 102 56-172 27-142 (157)
191 PLN03017 trehalose-phosphatase 86.2 4.1 8.9E-05 37.6 8.3 72 134-205 284-362 (366)
192 PLN02151 trehalose-phosphatase 85.2 3.9 8.4E-05 37.6 7.5 69 134-203 270-346 (354)
193 KOG0202 Ca2+ transporting ATPa 85.0 2.7 5.8E-05 42.7 6.8 133 56-199 584-731 (972)
194 KOG2469 IMP-GMP specific 5'-nu 82.7 4.5 9.8E-05 37.8 6.8 117 62-178 207-335 (424)
195 COG4030 Uncharacterized protei 81.8 16 0.00035 32.0 9.4 39 54-92 81-121 (315)
196 PRK10444 UMP phosphatase; Prov 81.8 2 4.4E-05 37.2 4.1 49 56-104 17-71 (248)
197 TIGR01458 HAD-SF-IIA-hyp3 HAD- 81.1 1.3 2.9E-05 38.4 2.7 49 57-105 22-76 (257)
198 KOG1618 Predicted phosphatase 80.8 1.2 2.6E-05 40.5 2.3 50 130-179 269-343 (389)
199 PF05822 UMPH-1: Pyrimidine 5' 80.6 2.5 5.5E-05 36.9 4.3 54 35-92 73-129 (246)
200 PRK12702 mannosyl-3-phosphogly 77.7 53 0.0011 29.6 11.8 46 133-179 208-255 (302)
201 PF14336 DUF4392: Domain of un 74.7 21 0.00045 31.9 8.5 91 61-161 68-187 (291)
202 PLN02423 phosphomannomutase 74.2 4.1 8.9E-05 35.0 3.8 30 148-177 199-232 (245)
203 COG3882 FkbH Predicted enzyme 73.9 10 0.00022 36.5 6.4 91 56-170 255-348 (574)
204 KOG2882 p-Nitrophenyl phosphat 72.8 12 0.00027 33.6 6.5 41 54-94 36-82 (306)
205 TIGR01460 HAD-SF-IIA Haloacid 72.0 16 0.00034 31.1 6.8 51 55-105 13-70 (236)
206 PRK00192 mannosyl-3-phosphogly 69.0 5.9 0.00013 34.3 3.7 41 56-96 21-64 (273)
207 PRK14502 bifunctional mannosyl 69.0 11 0.00024 37.7 5.8 47 132-179 612-660 (694)
208 PF06189 5-nucleotidase: 5'-nu 68.9 12 0.00026 33.0 5.5 72 70-179 187-261 (264)
209 PRK10513 sugar phosphate phosp 65.8 10 0.00022 32.4 4.5 46 56-101 20-68 (270)
210 PLN03190 aminophospholipid tra 64.3 6 0.00013 42.0 3.1 49 150-199 872-923 (1178)
211 TIGR02463 MPGP_rel mannosyl-3- 62.1 14 0.00031 30.5 4.6 35 59-93 19-56 (221)
212 COG2216 KdpB High-affinity K+ 61.7 23 0.0005 34.5 6.2 79 57-169 448-529 (681)
213 TIGR02461 osmo_MPG_phos mannos 58.6 13 0.00028 31.5 3.8 38 57-94 16-56 (225)
214 KOG3128 Uncharacterized conser 57.2 32 0.00069 30.5 5.9 54 35-92 121-177 (298)
215 PLN02177 glycerol-3-phosphate 57.1 64 0.0014 31.0 8.5 99 57-171 111-210 (497)
216 TIGR01487 SPP-like sucrose-pho 55.3 13 0.00029 30.6 3.3 39 56-94 18-59 (215)
217 PTZ00174 phosphomannomutase; P 53.9 16 0.00034 31.3 3.5 41 132-176 187-231 (247)
218 PRK01158 phosphoglycolate phos 53.2 16 0.00036 30.2 3.5 39 56-94 20-61 (230)
219 COG0626 MetC Cystathionine bet 52.6 2E+02 0.0044 26.9 11.2 107 59-199 66-176 (396)
220 PF08282 Hydrolase_3: haloacid 52.4 22 0.00047 29.1 4.1 39 55-93 14-55 (254)
221 COG4850 Uncharacterized conser 51.3 59 0.0013 29.9 6.8 83 53-164 193-293 (373)
222 TIGR00099 Cof-subfamily Cof su 50.5 22 0.00047 30.2 3.9 38 56-93 16-56 (256)
223 KOG2134 Polynucleotide kinase 50.2 54 0.0012 30.7 6.5 131 55-212 103-272 (422)
224 COG0561 Cof Predicted hydrolas 49.6 31 0.00066 29.4 4.7 40 55-94 19-61 (264)
225 PF02358 Trehalose_PPase: Treh 49.3 20 0.00043 30.3 3.4 61 131-191 163-234 (235)
226 KOG0210 P-type ATPase [Inorgan 48.7 48 0.001 33.7 6.2 61 134-198 769-832 (1051)
227 TIGR01486 HAD-SF-IIB-MPGP mann 47.8 31 0.00067 29.4 4.4 35 59-93 19-56 (256)
228 PRK15126 thiamin pyrimidine py 47.2 23 0.00051 30.3 3.6 39 56-94 19-60 (272)
229 TIGR00715 precor6x_red precorr 45.6 39 0.00084 29.5 4.7 63 136-202 187-255 (256)
230 PRK10976 putative hydrolase; P 45.6 25 0.00055 29.9 3.5 39 56-94 19-60 (266)
231 PRK10530 pyridoxal phosphate ( 45.1 27 0.00058 29.7 3.6 39 56-94 20-61 (272)
232 COG2099 CobK Precorrin-6x redu 43.2 1.5E+02 0.0033 26.1 7.9 57 139-201 189-251 (257)
233 PRK05294 carB carbamoyl phosph 43.1 2.3E+02 0.005 29.9 10.6 71 134-204 669-739 (1066)
234 KOG0323 TFIIF-interacting CTD 42.7 56 0.0012 32.5 5.7 50 55-104 200-253 (635)
235 PRK03669 mannosyl-3-phosphogly 42.7 42 0.00091 28.9 4.5 37 57-93 25-64 (271)
236 TIGR01482 SPP-subfamily Sucros 41.7 31 0.00066 28.4 3.3 37 57-93 16-55 (225)
237 PRK08057 cobalt-precorrin-6x r 39.8 61 0.0013 28.2 5.0 64 135-202 179-247 (248)
238 KOG2832 TFIIF-interacting CTD 39.7 68 0.0015 29.8 5.4 80 55-160 213-294 (393)
239 PRK12702 mannosyl-3-phosphogly 39.6 35 0.00076 30.7 3.5 39 57-95 19-60 (302)
240 TIGR00236 wecB UDP-N-acetylglu 39.2 1.2E+02 0.0025 27.0 6.9 85 71-178 31-119 (365)
241 PRK06203 aroB 3-dehydroquinate 38.8 3.2E+02 0.007 25.3 10.1 47 132-178 91-146 (389)
242 cd08198 DHQS-like2 Dehydroquin 38.2 3.3E+02 0.0071 25.2 9.8 47 132-178 79-134 (369)
243 COG4502 5'(3')-deoxyribonucleo 37.2 2.1E+02 0.0046 23.3 7.2 104 54-202 66-178 (180)
244 PF02571 CbiJ: Precorrin-6x re 37.1 55 0.0012 28.5 4.3 61 135-199 183-248 (249)
245 PF02350 Epimerase_2: UDP-N-ac 36.2 73 0.0016 28.9 5.1 83 72-178 12-100 (346)
246 PHA02575 1 deoxynucleoside mon 36.1 2.4E+02 0.0052 24.4 8.0 55 148-202 154-225 (227)
247 COG3769 Predicted hydrolase (H 35.6 1.7E+02 0.0036 25.7 6.8 91 59-176 137-235 (274)
248 KOG0053 Cystathionine beta-lya 35.1 3.9E+02 0.0085 25.2 10.4 107 59-198 80-188 (409)
249 PRK13790 phosphoribosylamine-- 34.6 3.6E+02 0.0078 24.6 10.5 71 134-204 67-137 (379)
250 PF06506 PrpR_N: Propionate ca 33.6 1.3E+02 0.0029 24.2 5.9 25 153-178 128-152 (176)
251 TIGR01369 CPSaseII_lrg carbamo 33.6 4.5E+02 0.0098 27.7 11.0 72 134-205 669-740 (1050)
252 PRK14021 bifunctional shikimat 33.1 3.5E+02 0.0077 26.1 9.6 35 143-177 263-303 (542)
253 KOG0538 Glycolate oxidase [Ene 32.6 2.1E+02 0.0046 26.2 7.2 64 96-180 245-311 (363)
254 PRK11197 lldD L-lactate dehydr 32.0 1.9E+02 0.0041 27.0 7.1 136 57-218 233-375 (381)
255 PF06189 5-nucleotidase: 5'-nu 31.8 2.7E+02 0.0058 24.7 7.7 34 141-178 78-111 (264)
256 KOG1605 TFIIF-interacting CTD 31.6 5.7 0.00012 35.0 -2.7 90 56-171 131-223 (262)
257 PLN02580 trehalose-phosphatase 31.4 60 0.0013 30.2 3.8 38 53-90 138-177 (384)
258 PF06437 ISN1: IMP-specific 5' 31.2 66 0.0014 30.1 3.9 45 134-179 350-402 (408)
259 cd04736 MDH_FMN Mandelate dehy 30.7 3.7E+02 0.0081 24.8 8.8 119 58-204 225-350 (361)
260 PLN03063 alpha,alpha-trehalose 29.8 2.2E+02 0.0048 29.1 7.8 37 55-91 531-571 (797)
261 KOG3040 Predicted sugar phosph 29.7 74 0.0016 27.6 3.7 39 55-93 22-66 (262)
262 PRK06425 histidinol-phosphate 29.6 3.3E+02 0.0072 23.9 8.2 103 59-198 43-148 (332)
263 PRK08354 putative aminotransfe 29.2 2.8E+02 0.0061 24.1 7.6 102 58-198 42-143 (311)
264 COG0079 HisC Histidinol-phosph 29.1 3E+02 0.0065 25.1 8.0 95 71-199 76-172 (356)
265 TIGR01689 EcbF-BcbF capsule bi 28.9 96 0.0021 24.1 4.1 45 55-101 23-85 (126)
266 TIGR02329 propionate_PrpR prop 28.9 2.2E+02 0.0048 27.6 7.3 33 141-178 140-172 (526)
267 PRK09423 gldA glycerol dehydro 28.2 4.5E+02 0.0098 23.8 9.2 46 132-177 67-116 (366)
268 COG2241 CobL Precorrin-6B meth 27.9 3.1E+02 0.0067 23.4 7.2 46 132-177 100-148 (210)
269 TIGR02468 sucrsPsyn_pln sucros 27.4 2.2E+02 0.0047 30.3 7.3 78 80-178 923-1002(1050)
270 CHL00162 thiG thiamin biosynth 26.8 3.6E+02 0.0078 23.9 7.6 109 55-200 117-236 (267)
271 COG5190 FCP1 TFIIF-interacting 26.6 1.1E+02 0.0024 28.6 4.6 79 56-160 252-332 (390)
272 cd03332 LMO_FMN L-Lactate 2-mo 26.1 2.4E+02 0.0052 26.2 6.8 123 58-206 242-371 (383)
273 TIGR01484 HAD-SF-IIB HAD-super 25.9 79 0.0017 25.6 3.3 36 55-90 16-54 (204)
274 PF03332 PMM: Eukaryotic phosp 25.3 44 0.00095 28.8 1.6 40 61-100 1-42 (220)
275 COG1877 OtsB Trehalose-6-phosp 25.2 2E+02 0.0043 25.4 5.8 87 120-206 169-256 (266)
276 cd02922 FCB2_FMN Flavocytochro 25.1 4.7E+02 0.01 23.8 8.4 124 58-206 202-334 (344)
277 TIGR01485 SPP_plant-cyano sucr 24.9 1.5E+02 0.0033 25.0 5.0 44 57-101 22-68 (249)
278 PF04413 Glycos_transf_N: 3-De 24.6 55 0.0012 27.0 2.1 75 55-163 104-185 (186)
279 TIGR02667 moaB_proteo molybden 24.5 3.7E+02 0.008 21.5 7.5 61 134-194 23-88 (163)
280 cd08197 DOIS 2-deoxy-scyllo-in 24.2 5.5E+02 0.012 23.4 11.6 46 132-177 64-118 (355)
281 PRK08304 stage V sporulation p 23.5 1.9E+02 0.0042 26.5 5.5 43 135-177 61-109 (337)
282 PRK10187 trehalose-6-phosphate 23.2 96 0.0021 26.9 3.4 37 55-91 35-75 (266)
283 PRK08247 cystathionine gamma-s 22.9 5.6E+02 0.012 23.0 8.7 106 60-199 56-163 (366)
284 cd00886 MogA_MoaB MogA_MoaB fa 22.3 2.2E+02 0.0047 22.4 5.1 62 133-194 20-86 (152)
285 PRK15424 propionate catabolism 22.2 3.6E+02 0.0077 26.3 7.4 33 140-177 149-181 (538)
286 PRK12815 carB carbamoyl phosph 22.0 8.5E+02 0.018 25.8 10.6 67 134-201 670-737 (1068)
287 COG2845 Uncharacterized protei 21.9 1.8E+02 0.0038 26.8 4.8 57 145-205 112-175 (354)
288 TIGR01456 CECR5 HAD-superfamil 21.9 87 0.0019 27.9 3.0 47 55-101 15-72 (321)
289 PLN02834 3-dehydroquinate synt 21.7 6.8E+02 0.015 23.5 9.7 47 132-178 143-198 (433)
290 PLN02151 trehalose-phosphatase 21.2 1.2E+02 0.0027 27.9 3.8 35 54-88 118-154 (354)
291 PRK05406 LamB/YcsF family prot 20.9 4.9E+02 0.011 22.8 7.3 73 132-204 110-203 (246)
292 PF05690 ThiG: Thiazole biosyn 20.7 3.8E+02 0.0082 23.5 6.4 97 54-179 102-207 (247)
293 cd00733 GlyRS_alpha_core Class 20.0 1.4E+02 0.003 26.5 3.6 41 135-176 88-131 (279)
No 1
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=99.97 E-value=2.2e-30 Score=217.21 Aligned_cols=189 Identities=58% Similarity=0.968 Sum_probs=176.1
Q ss_pred CcccCCCCcccHHHHHHHHHHHhCccHHHHHHccCCCCHHHHHHHHhccCCCCCCCCChhHHHHHhcCCCC-eEEEeCCC
Q 027403 1 MSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQR-KIIFTNAD 79 (224)
Q Consensus 1 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~~~-~~I~Tn~~ 79 (224)
|.+++|++.+++.++++.+|+.||+++.|++..|+.++.++|++.++++++++.++|.+.++++|..|+.+ .+++||+.
T Consensus 45 ~~eklgi~~e~a~~L~~~~yk~YG~t~aGL~~~~~~~d~deY~~~V~~~LPlq~LkPD~~LRnlLL~l~~r~k~~FTNa~ 124 (244)
T KOG3109|consen 45 FVEKLGISEEEAEELRESLYKEYGLTMAGLKAVGYIFDADEYHRFVHGRLPLQDLKPDPVLRNLLLSLKKRRKWIFTNAY 124 (244)
T ss_pred HHHHhCCChhhhHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHHHhhccCcHhhcCCCHHHHHHHHhCccccEEEecCCc
Confidence 34689999999999999999999999999999999999999999999999999999999999999999977 99999999
Q ss_pred hHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCC-CCcEEEEeCC
Q 027403 80 QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVD-PKKTIFFDDS 158 (224)
Q Consensus 80 ~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~-~~~~l~VgDs 158 (224)
+.|+.+.|+.+|+.++|++|+|++...+. +--.-|||.+.+|+.+.+.+|++ |.+++|++||
T Consensus 125 k~HA~r~Lk~LGieDcFegii~~e~~np~-----------------~~~~vcKP~~~afE~a~k~agi~~p~~t~FfDDS 187 (244)
T KOG3109|consen 125 KVHAIRILKKLGIEDCFEGIICFETLNPI-----------------EKTVVCKPSEEAFEKAMKVAGIDSPRNTYFFDDS 187 (244)
T ss_pred HHHHHHHHHHhChHHhccceeEeeccCCC-----------------CCceeecCCHHHHHHHHHHhCCCCcCceEEEcCc
Confidence 99999999999999999999999987641 11123799999999999999997 9999999999
Q ss_pred hhcHHHHHHcCCeEEEECCCCCCCCCceEeCCHhHHHHHHHHHHhhcC
Q 027403 159 ARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEGEG 206 (224)
Q Consensus 159 ~~Di~~A~~~G~~~v~v~~~~~~~~~d~~i~~~~dl~~~i~~~~~~~~ 206 (224)
.++|++|++.||+++++.......++++++.+..+.++.++++|+...
T Consensus 188 ~~NI~~ak~vGl~tvlv~~~~~~~~~d~~l~~ih~~k~a~p~l~~~~~ 235 (244)
T KOG3109|consen 188 ERNIQTAKEVGLKTVLVGREHKIKGVDYALEQIHNNKEALPELWEILE 235 (244)
T ss_pred hhhHHHHHhccceeEEEEeeecccchHHHHHHhhchhhhchHHhhccc
Confidence 999999999999999999988889999999999999999999999843
No 2
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.89 E-value=3.2e-22 Score=164.47 Aligned_cols=153 Identities=59% Similarity=0.977 Sum_probs=130.8
Q ss_pred ccCCCCcccHHHHHHHHHHHhCccHHHHHHccCCCCHHHHHHHHhccCCCCCCCCChhHHHHHhcCCCCeEEEeCCChHH
Q 027403 3 QHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKH 82 (224)
Q Consensus 3 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~~~~~I~Tn~~~~~ 82 (224)
+++|++..++..+..+++..+|.++.++... ...+.+++...++.......++++||+.++|+.|+++++|+||++...
T Consensus 32 ~~~g~~~~~~~~l~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~~~i~Tn~~~~~ 110 (184)
T TIGR01993 32 ARLKLSEEEARVLRKDYYREYGTTLAGLMIL-HEIDADEYLRYVHGRLPYEKLKPDPELRNLLLRLPGRKIIFTNGDRAH 110 (184)
T ss_pred HHcCcCHHHHHHHHHHHHHHHchHHHHHHHh-hCCCHHHHHHHHhccCCHHhCCCCHHHHHHHHhCCCCEEEEeCCCHHH
Confidence 3678887777777778888888887776653 456778888887765555567899999999999999999999999999
Q ss_pred HHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcH
Q 027403 83 AMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNI 162 (224)
Q Consensus 83 ~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di 162 (224)
+...++++|+.++||.++++++.+.+ ...+||+|++|..+++++|++|++++||||+..|+
T Consensus 111 ~~~~l~~~gl~~~fd~i~~~~~~~~~-------------------~~~~KP~p~~~~~~~~~~~~~~~~~l~vgD~~~di 171 (184)
T TIGR01993 111 ARRALNRLGIEDCFDGIFCFDTANPD-------------------YLLPKPSPQAYEKALREAGVDPERAIFFDDSARNI 171 (184)
T ss_pred HHHHHHHcCcHhhhCeEEEeecccCc-------------------cCCCCCCHHHHHHHHHHhCCCccceEEEeCCHHHH
Confidence 99999999999999999999887641 01139999999999999999999999999999999
Q ss_pred HHHHHcCCeEEEE
Q 027403 163 ASAKAAGLHTVIV 175 (224)
Q Consensus 163 ~~A~~~G~~~v~v 175 (224)
++|+++|+++++|
T Consensus 172 ~aA~~~G~~~i~v 184 (184)
T TIGR01993 172 AAAKALGMKTVLV 184 (184)
T ss_pred HHHHHcCCEEeeC
Confidence 9999999999875
No 3
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.86 E-value=3e-21 Score=166.47 Aligned_cols=123 Identities=14% Similarity=0.083 Sum_probs=111.2
Q ss_pred CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCcccc-ceeEeeccCCCCCCCCCCCCCcccccCCcccc
Q 027403 53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCF-EGIICFETINPRLQPADNTDGIENNSFSSNQR 128 (224)
Q Consensus 53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~f-d~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (224)
+...++||+.++|+.|+ ++++|+||++...+...++++|+.++| +.|++++++...
T Consensus 96 ~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~-------------------- 155 (253)
T TIGR01422 96 EYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPAG-------------------- 155 (253)
T ss_pred hcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCCC--------------------
Confidence 45789999999999996 678899999999999999999999986 889999988764
Q ss_pred ccCCCCHHHHHHHHHHhCCC-CCcEEEEeCChhcHHHHHHcCCeEEEECCCCC---------------------------
Q 027403 129 ILCKPSLEAIETAIRIANVD-PKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--------------------------- 180 (224)
Q Consensus 129 ~~~KP~~~~~~~al~~~~~~-~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--------------------------- 180 (224)
||+|++|..+++++++. |++|++||||.+|+++|+++|+.+|+|.+|..
T Consensus 156 ---KP~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (253)
T TIGR01422 156 ---RPAPWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWTVGLILSSNELGLSEEEYRALDPAELEARRAEATAR 232 (253)
T ss_pred ---CCCHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHHHHH
Confidence 99999999999999995 99999999999999999999999999998853
Q ss_pred --CCCCceEeCCHhHHHHHH
Q 027403 181 --VPPADHALNSIHNIKEAI 198 (224)
Q Consensus 181 --~~~~d~~i~~~~dl~~~i 198 (224)
..+++++++++.+|.+++
T Consensus 233 l~~~~~~~v~~~~~el~~~~ 252 (253)
T TIGR01422 233 LKAAGAHYVIDTLAELPAVI 252 (253)
T ss_pred HHhcCCCEehhcHHHHHHhh
Confidence 246899999999988764
No 4
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.86 E-value=5.2e-21 Score=160.80 Aligned_cols=124 Identities=19% Similarity=0.286 Sum_probs=113.4
Q ss_pred CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403 53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 129 (224)
Q Consensus 53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (224)
....++||+.++|+.|+ .+++|+||++...+...++.+|+.++|+.+++++++...
T Consensus 79 ~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~--------------------- 137 (214)
T PRK13288 79 ELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEHA--------------------- 137 (214)
T ss_pred hhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCCC---------------------
Confidence 35789999999999996 678899999999999999999999999999999988764
Q ss_pred cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC------CCCCceEeCCHhHHHHHHH
Q 027403 130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNIKEAIP 199 (224)
Q Consensus 130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~------~~~~d~~i~~~~dl~~~i~ 199 (224)
||+|.+|..++++++++|+++++|||+.+|+++|+++|++++++.++.. ..+++++++++.++.+++.
T Consensus 138 --Kp~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l~~~i~ 211 (214)
T PRK13288 138 --KPDPEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDKMSDLLAIVG 211 (214)
T ss_pred --CCCcHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECCHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999998853 3468999999999988764
No 5
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.85 E-value=1.8e-20 Score=163.64 Aligned_cols=143 Identities=15% Similarity=0.221 Sum_probs=122.9
Q ss_pred CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403 53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 129 (224)
Q Consensus 53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (224)
....++||+.++|+.|+ ++++|+||++...+...++++|+.++|+.+++++++...
T Consensus 106 ~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~~--------------------- 164 (260)
T PLN03243 106 GLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVYRG--------------------- 164 (260)
T ss_pred cCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCCCC---------------------
Confidence 35788999999999997 688899999999999999999999999999999998764
Q ss_pred cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC---CCCCceEeCCHhHHHHHHHHHHhhcC
Q 027403 130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP---VPPADHALNSIHNIKEAIPEIWEGEG 206 (224)
Q Consensus 130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~---~~~~d~~i~~~~dl~~~i~~~~~~~~ 206 (224)
||+|++|..+++++|++|++|+|||||..|+++|+++|+++|++..... ...++++++++.+|......-++.-+
T Consensus 165 --KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~~~el~~~~~~~~~~~~ 242 (260)
T PLN03243 165 --KPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRRLDDLSVVDLKNLSDLD 242 (260)
T ss_pred --CCCHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCCHHHHHHHHHhhhhccC
Confidence 9999999999999999999999999999999999999999999963221 33589999999999988887777644
Q ss_pred cchhhhhchhhHh
Q 027403 207 EQLEQVIQPAAVE 219 (224)
Q Consensus 207 ~~~~~~~~~~~~~ 219 (224)
. -|-+|-....|
T Consensus 243 ~-~~~~~~~~~~~ 254 (260)
T PLN03243 243 S-PEFQIPEPQLE 254 (260)
T ss_pred C-ccccCcchHHH
Confidence 4 45555444443
No 6
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.85 E-value=2.2e-20 Score=156.02 Aligned_cols=121 Identities=24% Similarity=0.309 Sum_probs=110.9
Q ss_pred CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403 54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 130 (224)
Q Consensus 54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (224)
...++||+.++|+.|+ ++++|+||++...+...++++|+.++|+.++++++....
T Consensus 83 ~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~---------------------- 140 (213)
T TIGR01449 83 LTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQR---------------------- 140 (213)
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCCC----------------------
Confidence 4789999999999996 678999999999999999999999999999999887764
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC------CCCCceEeCCHhHHHHH
Q 027403 131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNIKEA 197 (224)
Q Consensus 131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~------~~~~d~~i~~~~dl~~~ 197 (224)
||+|++|..++++++++|++|++|||+.+|+.+|+++|++++++.+|.. ..+++++++++.+|..+
T Consensus 141 -Kp~p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l~~~ 212 (213)
T TIGR01449 141 -KPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDSLNELPPL 212 (213)
T ss_pred -CCChHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCCHHHHHhh
Confidence 9999999999999999999999999999999999999999999988753 34689999999998764
No 7
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.85 E-value=8.1e-21 Score=160.22 Aligned_cols=142 Identities=20% Similarity=0.250 Sum_probs=113.8
Q ss_pred ccCCCCHHHHHHHHhccCC---CCCCCCChhHHHHHhcCCCCeEEEeCCChHHHHHHHHHcCCccccc-eeEeeccCCCC
Q 027403 33 VGYEFDNDEFHAFVHGKLP---YEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFE-GIICFETINPR 108 (224)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~L~~l~~~~~I~Tn~~~~~~~~~l~~lgl~~~fd-~ii~~~~~~~~ 108 (224)
++...+.+++...+...+. ...+.++||+.++|+.|+++++|+||++...+...++++|+.++|+ .++++++++..
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~L~~L~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~~ 141 (221)
T PRK10563 62 HGVTLAKAELEPVYRAEVARLFDSELEPIAGANALLESITVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQRW 141 (221)
T ss_pred hCCCCCHHHHHHHHHHHHHHHHHccCCcCCCHHHHHHHcCCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCCC
Confidence 3555555666554432211 2457899999999999999999999999999999999999999996 57777777764
Q ss_pred CCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC----CCCC
Q 027403 109 LQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPA 184 (224)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~----~~~~ 184 (224)
||+|++|..++++++++|++|+||||+..||++|+++|++++++..+.. ..++
T Consensus 142 -----------------------KP~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~~~~~~~~~~~~~~~ 198 (221)
T PRK10563 142 -----------------------KPDPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFYFCADPHNKPIDHPL 198 (221)
T ss_pred -----------------------CCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEEECCCCCCcchhhhh
Confidence 9999999999999999999999999999999999999999999965432 1233
Q ss_pred ceEeCCHhHHHHH
Q 027403 185 DHALNSIHNIKEA 197 (224)
Q Consensus 185 d~~i~~~~dl~~~ 197 (224)
+.+++++.+|.++
T Consensus 199 ~~~~~~~~~l~~~ 211 (221)
T PRK10563 199 VTTFTDLAQLPEL 211 (221)
T ss_pred hHHHHHHHHHHHH
Confidence 4556677666654
No 8
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.85 E-value=1.8e-20 Score=159.25 Aligned_cols=122 Identities=26% Similarity=0.357 Sum_probs=111.9
Q ss_pred CCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccC
Q 027403 55 LKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 131 (224)
Q Consensus 55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (224)
..++||+.++|+.|+ ++++|+||+++..+...++++|+.++|+.+++.++....
T Consensus 88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~~----------------------- 144 (220)
T COG0546 88 SRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPPP----------------------- 144 (220)
T ss_pred CccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCCC-----------------------
Confidence 579999999999997 678999999999999999999999999999996666654
Q ss_pred CCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC------CCCCceEeCCHhHHHHHHH
Q 027403 132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNIKEAIP 199 (224)
Q Consensus 132 KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~------~~~~d~~i~~~~dl~~~i~ 199 (224)
||+|..+..++++++++|++++||||+.+|+.+|+++|+++++|.||.. ..++|++++++.||...+.
T Consensus 145 KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~l~ 218 (220)
T COG0546 145 KPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLALLA 218 (220)
T ss_pred CcCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHHHHh
Confidence 9999999999999999988999999999999999999999999999862 4559999999999998765
No 9
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.85 E-value=1.3e-20 Score=162.81 Aligned_cols=120 Identities=26% Similarity=0.340 Sum_probs=110.3
Q ss_pred CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403 53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 129 (224)
Q Consensus 53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (224)
..+.++||+.++|+.|+ ++++|+||+++..+...++++|+.++|+.+++++++...
T Consensus 105 ~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~~--------------------- 163 (248)
T PLN02770 105 EQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEHA--------------------- 163 (248)
T ss_pred hcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCCC---------------------
Confidence 45789999999999996 689999999999999999999999999999999998764
Q ss_pred cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC-----CCCCceEeCCHhHHH
Q 027403 130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHALNSIHNIK 195 (224)
Q Consensus 130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~-----~~~~d~~i~~~~dl~ 195 (224)
||+|++|..++++++++|++|+||||+..|+++|+++|++++++.++.. ..+++++++++.++.
T Consensus 164 --KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~e~~ 232 (248)
T PLN02770 164 --KPHPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDYEDPK 232 (248)
T ss_pred --CCChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccchhhH
Confidence 9999999999999999999999999999999999999999999988753 346899999999943
No 10
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.85 E-value=4.2e-20 Score=154.31 Aligned_cols=124 Identities=23% Similarity=0.313 Sum_probs=113.4
Q ss_pred CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403 53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 129 (224)
Q Consensus 53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (224)
+.+.++||+.++|+.|+ ++++|+||++...+...++++|+.++|+.++++++....
T Consensus 72 ~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~--------------------- 130 (205)
T TIGR01454 72 GEVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVPRP--------------------- 130 (205)
T ss_pred cccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCCCC---------------------
Confidence 45889999999999996 678999999999999999999999999999999887653
Q ss_pred cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC------CCCCceEeCCHhHHHHHHH
Q 027403 130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNIKEAIP 199 (224)
Q Consensus 130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~------~~~~d~~i~~~~dl~~~i~ 199 (224)
||+|.+|..++++++++|++|+||||+.+|+.+|+++|++++++.||.. ..+++++++++.+|..+++
T Consensus 131 --KP~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l~~~~~ 204 (205)
T TIGR01454 131 --KPAPDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRKPQSLLALCR 204 (205)
T ss_pred --CCChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCCHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999998864 3458999999999988764
No 11
>PRK09449 dUMP phosphatase; Provisional
Probab=99.85 E-value=2.9e-20 Score=156.99 Aligned_cols=122 Identities=19% Similarity=0.246 Sum_probs=108.9
Q ss_pred CCCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccC
Q 027403 54 KLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 131 (224)
Q Consensus 54 ~~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (224)
.+.++||+.++|+.|+ ++++|+||++...+...++++|+.++||.++++++.+..
T Consensus 93 ~~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~----------------------- 149 (224)
T PRK09449 93 ICTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVGVA----------------------- 149 (224)
T ss_pred cCccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccCCC-----------------------
Confidence 4679999999999997 788899999999999999999999999999999998775
Q ss_pred CCCHHHHHHHHHHhCCC-CCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCC----CCCCceEeCCHhHHHHHH
Q 027403 132 KPSLEAIETAIRIANVD-PKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNIKEAI 198 (224)
Q Consensus 132 KP~~~~~~~al~~~~~~-~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~----~~~~d~~i~~~~dl~~~i 198 (224)
||+|++|..+++++|+. +++|+||||+. +|+++|+++|++++++.++.. ...++++++++.+|.+++
T Consensus 150 KP~p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~~~el~~~l 222 (224)
T PRK09449 150 KPDVAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSSLSELEQLL 222 (224)
T ss_pred CCCHHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECCHHHHHHHH
Confidence 99999999999999985 47999999998 699999999999999985422 235799999999998765
No 12
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.84 E-value=3.2e-20 Score=156.32 Aligned_cols=123 Identities=19% Similarity=0.295 Sum_probs=110.9
Q ss_pred CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCc--cccceeEeeccCCCCCCCCCCCCCcccccCCccc
Q 027403 53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLE--DCFEGIICFETINPRLQPADNTDGIENNSFSSNQ 127 (224)
Q Consensus 53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~--~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (224)
....++||+.++|+.|+ ++++|+||++...+...++++|+. ++|+.++++++....
T Consensus 84 ~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~------------------- 144 (220)
T TIGR03351 84 GPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAG------------------- 144 (220)
T ss_pred cCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCC-------------------
Confidence 34689999999999996 678999999999999999999998 999999999988764
Q ss_pred cccCCCCHHHHHHHHHHhCCC-CCcEEEEeCChhcHHHHHHcCCeE-EEECCCCC------CCCCceEeCCHhHHHHHH
Q 027403 128 RILCKPSLEAIETAIRIANVD-PKKTIFFDDSARNIASAKAAGLHT-VIVGSSVP------VPPADHALNSIHNIKEAI 198 (224)
Q Consensus 128 ~~~~KP~~~~~~~al~~~~~~-~~~~l~VgDs~~Di~~A~~~G~~~-v~v~~~~~------~~~~d~~i~~~~dl~~~i 198 (224)
||+|++|..+++++++. |++|+||||+..|+++|+++|+.+ +++.++.. ..+++++++++.+|.+++
T Consensus 145 ----KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~l~~~~ 219 (220)
T TIGR03351 145 ----RPAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDSVADLPALL 219 (220)
T ss_pred ----CCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeecCHHHHHHhh
Confidence 99999999999999997 799999999999999999999999 89987643 356899999999987754
No 13
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.84 E-value=3.8e-20 Score=161.19 Aligned_cols=125 Identities=14% Similarity=0.100 Sum_probs=111.9
Q ss_pred CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCcccc-ceeEeeccCCCCCCCCCCCCCcccccCCcccc
Q 027403 53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCF-EGIICFETINPRLQPADNTDGIENNSFSSNQR 128 (224)
Q Consensus 53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~f-d~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (224)
+...++||+.++|+.|+ ++++|+||++...+...++.+|+.++| +.|++++++...
T Consensus 98 ~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~-------------------- 157 (267)
T PRK13478 98 DYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPAG-------------------- 157 (267)
T ss_pred hcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCCCC--------------------
Confidence 45789999999999996 678999999999999999999988875 889999888764
Q ss_pred ccCCCCHHHHHHHHHHhCCC-CCcEEEEeCChhcHHHHHHcCCeEEEECCCCC---------------------------
Q 027403 129 ILCKPSLEAIETAIRIANVD-PKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--------------------------- 180 (224)
Q Consensus 129 ~~~KP~~~~~~~al~~~~~~-~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--------------------------- 180 (224)
||+|++|..+++++|+. |++|+||||+.+|+++|+++|+++|+|.++..
T Consensus 158 ---KP~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (267)
T PRK13478 158 ---RPYPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARAR 234 (267)
T ss_pred ---CCChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHH
Confidence 99999999999999996 69999999999999999999999999998753
Q ss_pred --CCCCceEeCCHhHHHHHHHH
Q 027403 181 --VPPADHALNSIHNIKEAIPE 200 (224)
Q Consensus 181 --~~~~d~~i~~~~dl~~~i~~ 200 (224)
..+++++++++.+|.+++..
T Consensus 235 l~~~~a~~vi~~~~~l~~~l~~ 256 (267)
T PRK13478 235 LRAAGAHYVIDTIADLPAVIAD 256 (267)
T ss_pred HHHcCCCeehhhHHHHHHHHHH
Confidence 35689999999999987754
No 14
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.84 E-value=8.1e-20 Score=155.87 Aligned_cols=122 Identities=22% Similarity=0.192 Sum_probs=110.2
Q ss_pred CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403 54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 130 (224)
Q Consensus 54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (224)
...++||+.++|+.|+ .+++|+||++...+...++++|+.++|+.++++++....
T Consensus 93 ~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~---------------------- 150 (229)
T PRK13226 93 QSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAER---------------------- 150 (229)
T ss_pred cCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCCCC----------------------
Confidence 4689999999999996 578899999999899999999999999999888877664
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC-------CCCCceEeCCHhHHHHHH
Q 027403 131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-------VPPADHALNSIHNIKEAI 198 (224)
Q Consensus 131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~-------~~~~d~~i~~~~dl~~~i 198 (224)
||+|++|..+++++|++|++|+||||+.+|+.+|+++|+.++++.+|.. ..+++++++++.+|.+.+
T Consensus 151 -KP~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~~ 224 (229)
T PRK13226 151 -KPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQPQLLWNPA 224 (229)
T ss_pred -CCCHHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCCHHHHHHHh
Confidence 9999999999999999999999999999999999999999999988753 235899999999998754
No 15
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.83 E-value=4.3e-20 Score=155.47 Aligned_cols=124 Identities=26% Similarity=0.374 Sum_probs=113.2
Q ss_pred CCCCChhHHHHHhcCCCC--eEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccC
Q 027403 54 KLKPDPVLRNLLLSMPQR--KIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 131 (224)
Q Consensus 54 ~~~~~~g~~~~L~~l~~~--~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (224)
.++++|++.+.|+.++.+ ++|+||++.......+.++|+.++||.+++|++++..
T Consensus 97 ~~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~~----------------------- 153 (229)
T COG1011 97 LLPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDVGVA----------------------- 153 (229)
T ss_pred hCccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHHcCChhhhheEEEecccccC-----------------------
Confidence 478999999999999855 9999999999999999999999999999999999875
Q ss_pred CCCHHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCCC-----CCCceEeCCHhHHHHHHHH
Q 027403 132 KPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVPV-----PPADHALNSIHNIKEAIPE 200 (224)
Q Consensus 132 KP~~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~~-----~~~d~~i~~~~dl~~~i~~ 200 (224)
||+|.+|+.+++++|++|++++||||+. +||.+|+++|+++||+..+... ..+++.+.++.++.+++..
T Consensus 154 KP~~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i~~l~~l~~~~~~ 228 (229)
T COG1011 154 KPDPEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISSLAELLDLLER 228 (229)
T ss_pred CCCcHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEEcCHHHHHHHHhh
Confidence 9999999999999999999999999998 5789999999999999987532 4689999999999987753
No 16
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.83 E-value=8.2e-20 Score=153.28 Aligned_cols=122 Identities=20% Similarity=0.251 Sum_probs=110.6
Q ss_pred CCCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccC
Q 027403 54 KLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 131 (224)
Q Consensus 54 ~~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (224)
..+++||+.++|+.++ ++++|+||++...+...++.+|+..+||.++++++.+.+
T Consensus 95 ~~~~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~----------------------- 151 (224)
T TIGR02254 95 GHQLLPGAFELMENLQQKFRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGIQ----------------------- 151 (224)
T ss_pred cCeeCccHHHHHHHHHhcCcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccCCC-----------------------
Confidence 4678999999999997 678999999999999999999999999999999988775
Q ss_pred CCCHHHHHHHHHHh-CCCCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCC----CCCCceEeCCHhHHHHHH
Q 027403 132 KPSLEAIETAIRIA-NVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNIKEAI 198 (224)
Q Consensus 132 KP~~~~~~~al~~~-~~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~----~~~~d~~i~~~~dl~~~i 198 (224)
||+|.+|..+++++ +++|++++||||+. +|+++|+++|++++++.++.. ..+++++++++.+|.++|
T Consensus 152 KP~~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~el~~~~ 224 (224)
T TIGR02254 152 KPDKEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIRSLEELYEIL 224 (224)
T ss_pred CCCHHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEECCHHHHHhhC
Confidence 99999999999999 99999999999998 799999999999999987632 235789999999998764
No 17
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.83 E-value=8.7e-20 Score=153.38 Aligned_cols=119 Identities=26% Similarity=0.408 Sum_probs=107.5
Q ss_pred CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403 53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 129 (224)
Q Consensus 53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (224)
..+.++||+.++|+.|+ ++++|+||++...+...++++|+.++|+.++++++.+..
T Consensus 91 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~--------------------- 149 (221)
T TIGR02253 91 AYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGVE--------------------- 149 (221)
T ss_pred HhCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCCCC---------------------
Confidence 34689999999999996 578899999999999999999999999999999998864
Q ss_pred cCCCCHHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCC-------CCCCceEeCCHhHH
Q 027403 130 LCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP-------VPPADHALNSIHNI 194 (224)
Q Consensus 130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~-------~~~~d~~i~~~~dl 194 (224)
||+|++|..+++++|++|++++||||+. +|+.+|+++|+++|++.++.. ...++++++++.+|
T Consensus 150 --KP~~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~el 220 (221)
T TIGR02253 150 --KPHPKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQGKSSKMEDDVYPYPDYEISSLREL 220 (221)
T ss_pred --CCCHHHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEECCCCCcccccccccCCCeeeCcHHhh
Confidence 9999999999999999999999999998 899999999999999988753 23478899998876
No 18
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.83 E-value=9.2e-20 Score=155.47 Aligned_cols=127 Identities=17% Similarity=0.240 Sum_probs=110.6
Q ss_pred CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403 53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 129 (224)
Q Consensus 53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (224)
....++||+.++|+.|+ ++++|+||+++..+...++++|+.++|+.++++++++..
T Consensus 90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~~~--------------------- 148 (224)
T PRK14988 90 PRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYP--------------------- 148 (224)
T ss_pred ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCCCC---------------------
Confidence 45789999999999997 578999999999999999999999999999999988764
Q ss_pred cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeE-EEECCCCC--CCCCceEeCCHhHHHHHHHHHH
Q 027403 130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT-VIVGSSVP--VPPADHALNSIHNIKEAIPEIW 202 (224)
Q Consensus 130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~-v~v~~~~~--~~~~d~~i~~~~dl~~~i~~~~ 202 (224)
||+|++|..+++++|++|++|+||||+..|+++|+++|+++ ++|.++.. ...+.....++.++.+++..++
T Consensus 149 --KP~p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 222 (224)
T PRK14988 149 --KEDQRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLIPSLM 222 (224)
T ss_pred --CCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeCCCCCccchhccCCCcHHHHHHHhhhhc
Confidence 99999999999999999999999999999999999999985 67877654 2335556678888888776654
No 19
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.82 E-value=2.8e-19 Score=163.43 Aligned_cols=131 Identities=18% Similarity=0.271 Sum_probs=115.1
Q ss_pred CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403 53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 129 (224)
Q Consensus 53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (224)
....++||+.++|+.|+ ++++|+||+++..+...++++|+.+||+.|++++++...
T Consensus 213 ~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~~--------------------- 271 (381)
T PLN02575 213 GIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVYRG--------------------- 271 (381)
T ss_pred cCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCCCC---------------------
Confidence 34678999999999996 688999999999999999999999999999999998764
Q ss_pred cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC---CCCCceEeCCHhHHHHHH-HHHHhhc
Q 027403 130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP---VPPADHALNSIHNIKEAI-PEIWEGE 205 (224)
Q Consensus 130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~---~~~~d~~i~~~~dl~~~i-~~~~~~~ 205 (224)
||+|++|..+++++|++|++|++|||+..||++|+++|+++|++.++.. ...++++++++.+|.-.. ..++.-+
T Consensus 272 --KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~s~~EL~~~~l~~l~~~~ 349 (381)
T PLN02575 272 --KPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVVRRLDELSIVDLKNLADIE 349 (381)
T ss_pred --CCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEECCHHHHHHHHHhhhhhcC
Confidence 9999999999999999999999999999999999999999999987643 335899999999995433 4455444
Q ss_pred C
Q 027403 206 G 206 (224)
Q Consensus 206 ~ 206 (224)
+
T Consensus 350 ~ 350 (381)
T PLN02575 350 S 350 (381)
T ss_pred c
Confidence 3
No 20
>PLN02940 riboflavin kinase
Probab=99.81 E-value=2.1e-19 Score=164.78 Aligned_cols=166 Identities=20% Similarity=0.276 Sum_probs=129.5
Q ss_pred ccCCCCcccHHHHHHHHHHHhCccHHHHH-----HccCCCCHHHHHHHHhccCC--CCCCCCChhHHHHHhcCC---CCe
Q 027403 3 QHLHIDESEVPRMCLELYREHGTTMAGLK-----AVGYEFDNDEFHAFVHGKLP--YEKLKPDPVLRNLLLSMP---QRK 72 (224)
Q Consensus 3 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~L~~l~---~~~ 72 (224)
+++|++... ++....+|.+...+. ..+...+.+++...+...+. ...+.++||+.++|+.|+ .++
T Consensus 38 ~~~G~~~~~-----~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~g~~l 112 (382)
T PLN02940 38 VKYGKQWDG-----REAQKIVGKTPLEAAATVVEDYGLPCSTDEFNSEITPLLSEQWCNIKALPGANRLIKHLKSHGVPM 112 (382)
T ss_pred HHcCCCCCH-----HHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHccCCCCcCHHHHHHHHHHCCCcE
Confidence 345655443 234455555533321 23445555555444433211 245789999999999997 678
Q ss_pred EEEeCCChHHHHHHHH-HcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCc
Q 027403 73 IIFTNADQKHAMEVLG-RLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKK 151 (224)
Q Consensus 73 ~I~Tn~~~~~~~~~l~-~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~ 151 (224)
+|+||+++..+...++ ++|+.++|+.+++++++... ||+|++|..++++++++|++
T Consensus 113 ~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~-----------------------KP~p~~~~~a~~~lgv~p~~ 169 (382)
T PLN02940 113 ALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKG-----------------------KPSPDIFLEAAKRLNVEPSN 169 (382)
T ss_pred EEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCCC-----------------------CCCHHHHHHHHHHcCCChhH
Confidence 9999999999998887 78999999999999998764 99999999999999999999
Q ss_pred EEEEeCChhcHHHHHHcCCeEEEECCCCC----CCCCceEeCCHhHHHH
Q 027403 152 TIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNIKE 196 (224)
Q Consensus 152 ~l~VgDs~~Di~~A~~~G~~~v~v~~~~~----~~~~d~~i~~~~dl~~ 196 (224)
|++|||+..|+++|+++|++++++.++.. ...++++++++.++..
T Consensus 170 ~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~sl~el~~ 218 (382)
T PLN02940 170 CLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINSLLDLQP 218 (382)
T ss_pred EEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCCHhHcCH
Confidence 99999999999999999999999998753 4568999999999864
No 21
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.81 E-value=3e-19 Score=148.20 Aligned_cols=103 Identities=21% Similarity=0.391 Sum_probs=96.9
Q ss_pred CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403 54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 130 (224)
Q Consensus 54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (224)
.++++||+.++|+.|+ ++++|+||++...+...++++|+.++||.++++++++..
T Consensus 90 ~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~---------------------- 147 (198)
T TIGR01428 90 RLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRAY---------------------- 147 (198)
T ss_pred cCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcCCC----------------------
Confidence 4679999999999996 678999999999999999999999999999999998875
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCC
Q 027403 131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 179 (224)
Q Consensus 131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~ 179 (224)
||+|.+|..+++++|++|++|++|||+..|+.+|+++|+++||+.++.
T Consensus 148 -KP~~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i~v~r~~ 195 (198)
T TIGR01428 148 -KPAPQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTAWVNRPG 195 (198)
T ss_pred -CCCHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEEEecCCC
Confidence 999999999999999999999999999999999999999999998765
No 22
>PRK11587 putative phosphatase; Provisional
Probab=99.81 E-value=4.1e-19 Score=150.12 Aligned_cols=119 Identities=21% Similarity=0.261 Sum_probs=105.7
Q ss_pred CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403 53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 129 (224)
Q Consensus 53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (224)
+...++||+.++|+.|+ ++++|+||++.......++.+|+ .+|+.+++++++...
T Consensus 80 ~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l-~~~~~i~~~~~~~~~--------------------- 137 (218)
T PRK11587 80 EGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL-PAPEVFVTAERVKRG--------------------- 137 (218)
T ss_pred cCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC-CCccEEEEHHHhcCC---------------------
Confidence 46789999999999996 68999999998888888899998 467888888887664
Q ss_pred cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC---CCCCceEeCCHhHHH
Q 027403 130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP---VPPADHALNSIHNIK 195 (224)
Q Consensus 130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~---~~~~d~~i~~~~dl~ 195 (224)
||+|.+|..+++++|++|++|+|||||..|+++|+++|+.++++.++.. ...++++++++.+|.
T Consensus 138 --KP~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~el~ 204 (218)
T PRK11587 138 --KPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLHSLEQLT 204 (218)
T ss_pred --CCCcHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEecchhhee
Confidence 9999999999999999999999999999999999999999999987653 345899999999875
No 23
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.80 E-value=4.8e-19 Score=149.81 Aligned_cols=121 Identities=22% Similarity=0.250 Sum_probs=110.2
Q ss_pred CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403 53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 129 (224)
Q Consensus 53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (224)
....++||+.++|+.|+ ++++|+||++...+...++++|+.++|+.++++++++..
T Consensus 89 ~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~--------------------- 147 (222)
T PRK10826 89 ETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLPYS--------------------- 147 (222)
T ss_pred cCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCCCC---------------------
Confidence 35789999999999996 689999999999999999999999999999999887764
Q ss_pred cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC-----CCCCceEeCCHhHHHH
Q 027403 130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHALNSIHNIKE 196 (224)
Q Consensus 130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~-----~~~~d~~i~~~~dl~~ 196 (224)
||+|++|..+++++|++|++|++|||+.+|+.+|+++|++++++.++.. ...+++++.|+.||..
T Consensus 148 --Kp~~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl~~ 217 (222)
T PRK10826 148 --KPHPEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLESLTELTA 217 (222)
T ss_pred --CCCHHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccCHHHHhh
Confidence 9999999999999999999999999999999999999999999988753 2358999999999864
No 24
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.80 E-value=1.9e-18 Score=151.92 Aligned_cols=125 Identities=18% Similarity=0.265 Sum_probs=112.0
Q ss_pred CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403 53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 129 (224)
Q Consensus 53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (224)
..++++||+.++|+.|+ .+++|+||++...+...++++|+.++|+.+++++..
T Consensus 139 ~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~------------------------ 194 (273)
T PRK13225 139 PALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPI------------------------ 194 (273)
T ss_pred ccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCC------------------------
Confidence 45789999999999997 678899999999999999999999999988877654
Q ss_pred cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC------CCCCceEeCCHhHHHHHHHHHHh
Q 027403 130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNIKEAIPEIWE 203 (224)
Q Consensus 130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~------~~~~d~~i~~~~dl~~~i~~~~~ 203 (224)
+|++..|..++++++++|++|+||||+..|+++|+++|+.++++.++.. ..+++++++++.+|.+++.+++.
T Consensus 195 --~~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL~~~~~~~~~ 272 (273)
T PRK13225 195 --LSKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLETPSDLLQAVTQLMR 272 (273)
T ss_pred --CCCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECCHHHHHHHHHHHhc
Confidence 3456899999999999999999999999999999999999999998854 34699999999999999888764
No 25
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.80 E-value=2e-18 Score=151.43 Aligned_cols=124 Identities=20% Similarity=0.320 Sum_probs=111.7
Q ss_pred CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403 54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 130 (224)
Q Consensus 54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (224)
...++||+.++|+.|+ ++++|+||++...+...++++|+..+|+.++++++++..
T Consensus 99 ~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~~---------------------- 156 (272)
T PRK13223 99 LTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQK---------------------- 156 (272)
T ss_pred CCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCCC----------------------
Confidence 4678999999999996 688999999999999999999999999999999887664
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC------CCCCceEeCCHhHHHHHHHH
Q 027403 131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNIKEAIPE 200 (224)
Q Consensus 131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~------~~~~d~~i~~~~dl~~~i~~ 200 (224)
||+|.+|..+++++|++|++|++|||+.+|+++|+++|+++++|.+|.. ...++++++++.+|.+++..
T Consensus 157 -Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~~~~~~ 231 (272)
T PRK13223 157 -KPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDDLRALLPGCAD 231 (272)
T ss_pred -CCCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECCHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999988743 34689999999999876553
No 26
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.79 E-value=2.8e-18 Score=144.33 Aligned_cols=124 Identities=21% Similarity=0.301 Sum_probs=112.8
Q ss_pred CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403 54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 130 (224)
Q Consensus 54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (224)
...++||+.++|+.++ ++++|+||+....+...++++|+..+|+.++++++....
T Consensus 91 ~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~---------------------- 148 (226)
T PRK13222 91 GSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPNK---------------------- 148 (226)
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCCC----------------------
Confidence 4689999999999997 678899999999999999999999999999998887664
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC------CCCCceEeCCHhHHHHHHHH
Q 027403 131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNIKEAIPE 200 (224)
Q Consensus 131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~------~~~~d~~i~~~~dl~~~i~~ 200 (224)
||+|.+|..++++++++|++|++|||+.+|+.+|+++|++++++.+|.. ..+++++++++.+|..++.+
T Consensus 149 -kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~~~l~~ 223 (226)
T PRK13222 149 -KPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAELLPLLGL 223 (226)
T ss_pred -CcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998753 24688999999999988754
No 27
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.79 E-value=1e-18 Score=148.92 Aligned_cols=124 Identities=29% Similarity=0.390 Sum_probs=107.7
Q ss_pred CCCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccc
Q 027403 52 YEKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR 128 (224)
Q Consensus 52 ~~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (224)
.+..++.||+.++|..|+ ..++++||+++..+...++.+|+.++|+.+++++++...
T Consensus 82 ~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~~~-------------------- 141 (221)
T COG0637 82 LEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVARG-------------------- 141 (221)
T ss_pred hcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHhcC--------------------
Confidence 456899999999999998 678899999999999999999999999999999998874
Q ss_pred ccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--------CCCCceEeCCHhHHHHHH
Q 027403 129 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNIKEAI 198 (224)
Q Consensus 129 ~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--------~~~~d~~i~~~~dl~~~i 198 (224)
||+|++|..+++++|++|++|+.|+||.++|++|+++||.+|++..+.. ....+..+.++.++...+
T Consensus 142 ---KP~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 216 (221)
T COG0637 142 ---KPAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVVGVPAGHDRPHLDPLDAHGADTVLLDLAELPALL 216 (221)
T ss_pred ---CCCCHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEEEecCCCCccccchhhhhhcchhhccHHHHHHHH
Confidence 9999999999999999999999999999999999999999999987433 122445555555555444
No 28
>PLN02811 hydrolase
Probab=99.78 E-value=1.4e-18 Score=147.20 Aligned_cols=120 Identities=23% Similarity=0.274 Sum_probs=102.0
Q ss_pred CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHH-HHHHcCCccccceeEeec--cCCCCCCCCCCCCCcccccCCccc
Q 027403 54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAME-VLGRLGLEDCFEGIICFE--TINPRLQPADNTDGIENNSFSSNQ 127 (224)
Q Consensus 54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~-~l~~lgl~~~fd~ii~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 127 (224)
...++||+.++|+.|+ ++++|+||+++..+.. .++..++.++|+.+++++ ++...
T Consensus 76 ~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~------------------- 136 (220)
T PLN02811 76 TSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQG------------------- 136 (220)
T ss_pred hCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCC-------------------
Confidence 4678999999999996 6899999998865554 444457889999999999 76653
Q ss_pred cccCCCCHHHHHHHHHHhC---CCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC----CCCCceEeCCHhHHHH
Q 027403 128 RILCKPSLEAIETAIRIAN---VDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNIKE 196 (224)
Q Consensus 128 ~~~~KP~~~~~~~al~~~~---~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~----~~~~d~~i~~~~dl~~ 196 (224)
||+|++|..++++++ ++|++|+||||+..|+++|+++|+++|++.++.. ..+++++++++.++..
T Consensus 137 ----KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~~~e~~~ 208 (220)
T PLN02811 137 ----KPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSSLLDFKP 208 (220)
T ss_pred ----CCCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcCHhhCCH
Confidence 999999999999997 9999999999999999999999999999988642 3357888888887553
No 29
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.78 E-value=1.8e-18 Score=148.46 Aligned_cols=117 Identities=15% Similarity=0.200 Sum_probs=103.0
Q ss_pred CCCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccC
Q 027403 54 KLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 131 (224)
Q Consensus 54 ~~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (224)
.+.++||+.++|+.|+ ++++|+||++.. ++++|+.++|+.++++++....
T Consensus 111 ~~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~~~~----------------------- 162 (238)
T PRK10748 111 RIDVPQATHDTLKQLAKKWPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPHGRS----------------------- 162 (238)
T ss_pred cCCCCccHHHHHHHHHcCCCEEEEECCCch-----HHHCCcHHhhceeEecccCCcC-----------------------
Confidence 4789999999999997 679999998765 4789999999999999988764
Q ss_pred CCCHHHHHHHHHHhCCCCCcEEEEeCC-hhcHHHHHHcCCeEEEECCCCC--------CCCCceEeCCHhHHHHHH
Q 027403 132 KPSLEAIETAIRIANVDPKKTIFFDDS-ARNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNIKEAI 198 (224)
Q Consensus 132 KP~~~~~~~al~~~~~~~~~~l~VgDs-~~Di~~A~~~G~~~v~v~~~~~--------~~~~d~~i~~~~dl~~~i 198 (224)
||+|.+|..+++++|++|++|+||||+ ..|+.+|+++|++++|+..+.. ...+++.+.++.+|.+++
T Consensus 163 KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~p~~~i~~l~el~~~~ 238 (238)
T PRK10748 163 KPFSDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWINPENGDLMQTWDSRLLPHIEISRLASLTSLI 238 (238)
T ss_pred CCcHHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEEcCCCccccccccccCCCCEEECCHHHHHhhC
Confidence 999999999999999999999999999 4899999999999999987532 134788999999998764
No 30
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.77 E-value=3e-18 Score=140.64 Aligned_cols=100 Identities=22% Similarity=0.437 Sum_probs=92.1
Q ss_pred CCCCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403 53 EKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 130 (224)
Q Consensus 53 ~~~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (224)
....++|+ .++|..|+ ++++|+||++...+...++++|+.++|+.|++++++...
T Consensus 85 ~~~~~~~~-~e~L~~L~~~~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~---------------------- 141 (188)
T PRK10725 85 DSVEPLPL-IEVVKAWHGRRPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQHH---------------------- 141 (188)
T ss_pred ccCCCccH-HHHHHHHHhCCCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccCC----------------------
Confidence 45677886 47888886 688999999999999999999999999999999998764
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEEC
Q 027403 131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG 176 (224)
Q Consensus 131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~ 176 (224)
||+|++|..++++++++|++|++|||+.+|+++|+++|+++|++.
T Consensus 142 -KP~p~~~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~~i~~~ 186 (188)
T PRK10725 142 -KPAPDTFLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMDAVDVR 186 (188)
T ss_pred -CCChHHHHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCEEEeec
Confidence 999999999999999999999999999999999999999999985
No 31
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.76 E-value=1.3e-18 Score=138.71 Aligned_cols=100 Identities=34% Similarity=0.591 Sum_probs=95.1
Q ss_pred CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403 53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 129 (224)
Q Consensus 53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (224)
...+++||+.++|..|+ ++++++||++...+...++++|+.++|+.++++++.+..
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~--------------------- 132 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGSR--------------------- 132 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSSS---------------------
T ss_pred hccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhhh---------------------
Confidence 45789999999999997 789999999999999999999999999999999988875
Q ss_pred cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEE
Q 027403 130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 175 (224)
Q Consensus 130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v 175 (224)
||++.+|..++++++++|++|+||||+..|+.+|+++|+.+|+|
T Consensus 133 --Kp~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 133 --KPDPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKTIWV 176 (176)
T ss_dssp --TTSHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEEEEE
T ss_pred --hhHHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeEEeC
Confidence 99999999999999999999999999999999999999999986
No 32
>PRK06769 hypothetical protein; Validated
Probab=99.75 E-value=6.3e-18 Score=138.95 Aligned_cols=122 Identities=16% Similarity=0.139 Sum_probs=99.1
Q ss_pred CCCCChhHHHHHhcCC---CCeEEEeCCChH--------HHHHHHHHcCCccccceeE-eeccCCCCCCCCCCCCCcccc
Q 027403 54 KLKPDPVLRNLLLSMP---QRKIIFTNADQK--------HAMEVLGRLGLEDCFEGII-CFETINPRLQPADNTDGIENN 121 (224)
Q Consensus 54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~--------~~~~~l~~lgl~~~fd~ii-~~~~~~~~~~~~~~~~~~~~~ 121 (224)
.+.++||+.++|+.|+ ++++|+||++.. .+...++++|+.++|..+. ++++...
T Consensus 26 ~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~-------------- 91 (173)
T PRK06769 26 SFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDGCEC-------------- 91 (173)
T ss_pred HeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCCC--------------
Confidence 5678999999999996 689999998741 2445577788766554433 3444444
Q ss_pred cCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC------------CCCCceEeC
Q 027403 122 SFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------------VPPADHALN 189 (224)
Q Consensus 122 ~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~------------~~~~d~~i~ 189 (224)
+||+|++|..++++++++|++|+||||+..|+.+|+++|+.+|++.++.. ...++++++
T Consensus 92 ---------~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~ 162 (173)
T PRK06769 92 ---------RKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIAE 162 (173)
T ss_pred ---------CCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchhh
Confidence 39999999999999999999999999999999999999999999998752 234889999
Q ss_pred CHhHHHHHH
Q 027403 190 SIHNIKEAI 198 (224)
Q Consensus 190 ~~~dl~~~i 198 (224)
++.|+.++|
T Consensus 163 ~~~el~~~l 171 (173)
T PRK06769 163 NFEDAVNWI 171 (173)
T ss_pred CHHHHHHHH
Confidence 999998764
No 33
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.75 E-value=1e-17 Score=136.83 Aligned_cols=98 Identities=31% Similarity=0.384 Sum_probs=88.8
Q ss_pred CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403 54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 130 (224)
Q Consensus 54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (224)
...++||+.++|+.|+ ++++|+||+.. ....++++|+.++|+.+++++++...
T Consensus 85 ~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~~~~~~---------------------- 140 (185)
T TIGR01990 85 PADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDPAEIKKG---------------------- 140 (185)
T ss_pred CcccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehhhcCCC----------------------
Confidence 3578999999999997 67889999753 45689999999999999999988764
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEEC
Q 027403 131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG 176 (224)
Q Consensus 131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~ 176 (224)
||+|++|..++++++++|++|++|||+.+|+++|+++|+++|+|+
T Consensus 141 -kp~p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~~i~v~ 185 (185)
T TIGR01990 141 -KPDPEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMFAVGVG 185 (185)
T ss_pred -CCChHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCEEEecC
Confidence 999999999999999999999999999999999999999999874
No 34
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=99.74 E-value=1.6e-17 Score=136.50 Aligned_cols=128 Identities=17% Similarity=0.156 Sum_probs=98.7
Q ss_pred CCCCChhHHHHHhcCC---CCeEEEeCCCh---------------HHHHHHHHHcCCccccceeEeeccCCCCCCCCCCC
Q 027403 54 KLKPDPVLRNLLLSMP---QRKIIFTNADQ---------------KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNT 115 (224)
Q Consensus 54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~---------------~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~ 115 (224)
.++++||+.++|+.|+ ++++|+||++. ..+...+.++++. |+.++.+......
T Consensus 24 ~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~~~~~~~------- 94 (176)
T TIGR00213 24 NFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LDGIYYCPHHPEG------- 94 (176)
T ss_pred HeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--ccEEEECCCCCcc-------
Confidence 5788999999999997 68999999984 3555677777776 7776654322110
Q ss_pred CCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeE-EEECCCCC-----CCCCceEeC
Q 027403 116 DGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT-VIVGSSVP-----VPPADHALN 189 (224)
Q Consensus 116 ~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~-v~v~~~~~-----~~~~d~~i~ 189 (224)
.+ ..+..+..+||+|.+|..++++++++|++|+||||+..|+++|+++|+++ +++.++.. ..+++++++
T Consensus 95 ----~~-~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~ 169 (176)
T TIGR00213 95 ----VE-EFRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLN 169 (176)
T ss_pred ----cc-cccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEec
Confidence 00 00001112499999999999999999999999999999999999999998 79988864 235899999
Q ss_pred CHhHHH
Q 027403 190 SIHNIK 195 (224)
Q Consensus 190 ~~~dl~ 195 (224)
++.+|.
T Consensus 170 ~~~el~ 175 (176)
T TIGR00213 170 SLADLP 175 (176)
T ss_pred cHHHhh
Confidence 999986
No 35
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.74 E-value=1.5e-17 Score=138.68 Aligned_cols=120 Identities=17% Similarity=0.304 Sum_probs=99.6
Q ss_pred ccCCCCHHHHHHHHhccCCCCCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHH-cCCccccceeEeeccCCCC
Q 027403 33 VGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGR-LGLEDCFEGIICFETINPR 108 (224)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~-lgl~~~fd~ii~~~~~~~~ 108 (224)
.+...+.+++...+... ...++||+.++|+.|+ ++++|+||++...+...+.. .++..+||.++++++++.+
T Consensus 65 ~~~~~~~~~~~~~~~~~----~~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~ 140 (199)
T PRK09456 65 MALSLSYEQFAHGWQAV----FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMR 140 (199)
T ss_pred hCCCCCHHHHHHHHHHH----HhccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCC
Confidence 34444555555444331 1358999999999996 68999999998877666655 4788899999999998875
Q ss_pred CCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCC
Q 027403 109 LQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 179 (224)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~ 179 (224)
||+|++|..+++++|++|++|+||||+..|+.+|+++|++++++.++.
T Consensus 141 -----------------------KP~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i~~~~~~ 188 (199)
T PRK09456 141 -----------------------KPEARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITSILVTDKQ 188 (199)
T ss_pred -----------------------CCCHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEEEecCCc
Confidence 999999999999999999999999999999999999999999998764
No 36
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=99.74 E-value=3.4e-17 Score=134.87 Aligned_cols=121 Identities=21% Similarity=0.249 Sum_probs=99.8
Q ss_pred CCCCChhHHHHHhcCC---CCeEEEeCCCh---------------HHHHHHHHHcCCccccceeEeecc-----CCCCCC
Q 027403 54 KLKPDPVLRNLLLSMP---QRKIIFTNADQ---------------KHAMEVLGRLGLEDCFEGIICFET-----INPRLQ 110 (224)
Q Consensus 54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~---------------~~~~~~l~~lgl~~~fd~ii~~~~-----~~~~~~ 110 (224)
.+.++||+.++|+.|+ ++++|+||++. ..+...++++|+ .|+.++.+.+ ...
T Consensus 27 ~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~~i~~~~~~~~~~~~~--- 101 (181)
T PRK08942 27 EWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLDGIYYCPHHPEDGCDC--- 101 (181)
T ss_pred HeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCCCCCcC---
Confidence 4789999999999996 68899999873 345556777787 4887765432 333
Q ss_pred CCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC-----CCCC-
Q 027403 111 PADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPA- 184 (224)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~-----~~~~- 184 (224)
+||+|.+|..++++++++|++|+||||+.+|+.+|+++|+.++++.++.. ...+
T Consensus 102 --------------------~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~ 161 (181)
T PRK08942 102 --------------------RKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAP 161 (181)
T ss_pred --------------------CCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCC
Confidence 39999999999999999999999999999999999999999999988753 2335
Q ss_pred -ceEeCCHhHHHHHHH
Q 027403 185 -DHALNSIHNIKEAIP 199 (224)
Q Consensus 185 -d~~i~~~~dl~~~i~ 199 (224)
+++++++.++.+++.
T Consensus 162 ~~~ii~~l~el~~~l~ 177 (181)
T PRK08942 162 GTWVLDSLADLPQALK 177 (181)
T ss_pred CceeecCHHHHHHHHH
Confidence 899999999988764
No 37
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.73 E-value=4.5e-17 Score=152.37 Aligned_cols=123 Identities=15% Similarity=0.203 Sum_probs=108.7
Q ss_pred CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403 53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 129 (224)
Q Consensus 53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (224)
...+++||+.++|+.|+ ++++|+||++...+...++++|+.++|+.+++++++..
T Consensus 327 ~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~~---------------------- 384 (459)
T PRK06698 327 GKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQINS---------------------- 384 (459)
T ss_pred cCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCCC----------------------
Confidence 35789999999999996 67999999999999999999999999999999988743
Q ss_pred cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC----CCCCceEeCCHhHHHHHHHHH
Q 027403 130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNIKEAIPEI 201 (224)
Q Consensus 130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~----~~~~d~~i~~~~dl~~~i~~~ 201 (224)
||+|++|..++++++ |++|++|||+.+|+.+|+++|+.++++.++.. ...++++++++.++.+++..+
T Consensus 385 --~~kP~~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~l~el~~~l~~~ 456 (459)
T PRK06698 385 --LNKSDLVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDDLLELKGILSTV 456 (459)
T ss_pred --CCCcHHHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCCHHHHHHHHHHH
Confidence 778889999998865 78999999999999999999999999988753 345899999999999877553
No 38
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.72 E-value=2.1e-17 Score=134.11 Aligned_cols=97 Identities=34% Similarity=0.558 Sum_probs=89.0
Q ss_pred CCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccC
Q 027403 55 LKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 131 (224)
Q Consensus 55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (224)
++++||+.++|+.|+ ++++|+||++... ...+.++|+.++|+.++++++.+..
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~~~----------------------- 139 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVGRG----------------------- 139 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCCCC-----------------------
Confidence 689999999999996 5789999999988 6666679999999999999887764
Q ss_pred CCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEE
Q 027403 132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 175 (224)
Q Consensus 132 KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v 175 (224)
||+|.+|..++++++++|++|++|||+..|+.+|+++|+.+|+|
T Consensus 140 KP~~~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 140 KPDPDIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMHTVLV 183 (183)
T ss_pred CCCHHHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCEEEeC
Confidence 99999999999999999999999999999999999999999975
No 39
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.72 E-value=6.5e-17 Score=142.90 Aligned_cols=121 Identities=19% Similarity=0.309 Sum_probs=102.6
Q ss_pred CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccce--eEeeccCCCCCCCCCCCCCcccccCCcccc
Q 027403 54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEG--IICFETINPRLQPADNTDGIENNSFSSNQR 128 (224)
Q Consensus 54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~--ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (224)
.++++||+.++|+.|+ ++++|+||++...+...+++++...+|+. +++++++...
T Consensus 142 ~~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~-------------------- 201 (286)
T PLN02779 142 ALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVPKK-------------------- 201 (286)
T ss_pred CCCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccCCC--------------------
Confidence 4689999999999986 68999999999999999988754344442 3367766653
Q ss_pred ccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC----CCCCceEeCCHhHHHHH
Q 027403 129 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNIKEA 197 (224)
Q Consensus 129 ~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~----~~~~d~~i~~~~dl~~~ 197 (224)
||+|++|..+++++|++|++|+||||+.+|+++|+++|+++|++.++.. ...++++++++.++...
T Consensus 202 ---KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~~~~l~~~ 271 (286)
T PLN02779 202 ---KPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDCLGDVPLE 271 (286)
T ss_pred ---CCCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECChhhcchh
Confidence 9999999999999999999999999999999999999999999988753 24589999999988753
No 40
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.70 E-value=5.3e-17 Score=132.56 Aligned_cols=98 Identities=27% Similarity=0.430 Sum_probs=89.9
Q ss_pred CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403 53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 129 (224)
Q Consensus 53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (224)
....++||+.++|+.|+ .+++|+||+ ..+...++++|+.++|+.++++++.+..
T Consensus 85 ~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~~~--------------------- 141 (185)
T TIGR02009 85 TGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVKEG--------------------- 141 (185)
T ss_pred cCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCCCC---------------------
Confidence 45789999999999996 678899998 6688899999999999999999888764
Q ss_pred cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEE
Q 027403 130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 175 (224)
Q Consensus 130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v 175 (224)
||+|++|..++++++++|+++++|||+..|+.+|+++|+++++|
T Consensus 142 --kp~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 142 --KPHPETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMFAVAV 185 (185)
T ss_pred --CCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCeEeeC
Confidence 99999999999999999999999999999999999999999875
No 41
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.70 E-value=6.9e-17 Score=134.37 Aligned_cols=97 Identities=22% Similarity=0.341 Sum_probs=88.8
Q ss_pred CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403 54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 130 (224)
Q Consensus 54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (224)
.+.++||+.++|+.|+ ++++|+||++.. +...++++|+.++|+.++++++.+..
T Consensus 103 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~~~~~~---------------------- 159 (203)
T TIGR02252 103 PWQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSYEVGAE---------------------- 159 (203)
T ss_pred cceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeecccCCC----------------------
Confidence 4678999999999996 678999998875 57889999999999999999988764
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHHHcCCeEEE
Q 027403 131 CKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVI 174 (224)
Q Consensus 131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~~~G~~~v~ 174 (224)
||+|.+|..+++++|++|++|++|||+. +||++|+++|+++||
T Consensus 160 -KP~~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 160 -KPDPKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred -CCCHHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCeeeC
Confidence 9999999999999999999999999997 799999999999885
No 42
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.69 E-value=1.7e-16 Score=132.97 Aligned_cols=102 Identities=22% Similarity=0.270 Sum_probs=89.3
Q ss_pred CCCCChhHHHHHhcCC---CCeEEEeCCChHH--HHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccc
Q 027403 54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKH--AMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR 128 (224)
Q Consensus 54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~--~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (224)
.+.++||+.++|+.|+ ++++|+||++... ....+..+++.++||.++++++.+..
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~-------------------- 151 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGLR-------------------- 151 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCCC--------------------
Confidence 4778999999999996 6788999987643 33345567888999999999888764
Q ss_pred ccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCC
Q 027403 129 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS 178 (224)
Q Consensus 129 ~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~ 178 (224)
||+|.+|..+++++|++|++|+||||+..|+.+|+++|++++++.++
T Consensus 152 ---KP~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~i~v~~~ 198 (211)
T TIGR02247 152 ---KPDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTIKVSDE 198 (211)
T ss_pred ---CCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEEEEECCH
Confidence 99999999999999999999999999999999999999999999764
No 43
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.69 E-value=1.5e-16 Score=132.00 Aligned_cols=116 Identities=15% Similarity=0.152 Sum_probs=97.0
Q ss_pred CCCCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCcc----ccceeEeeccCCCCCCCCCCCCCcccccCCcc
Q 027403 53 EKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLED----CFEGIICFETINPRLQPADNTDGIENNSFSSN 126 (224)
Q Consensus 53 ~~~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~----~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (224)
....++||+.++|+.|+ ++++++||++.......++.+++.. +|+.++++++.
T Consensus 71 ~~~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~--------------------- 129 (197)
T PHA02597 71 RYLSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHD--------------------- 129 (197)
T ss_pred HhccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccC---------------------
Confidence 44679999999999997 5788999988776666777887765 45667777763
Q ss_pred ccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHc--CCeEEEECCCCC--CCCCceEeCCHhHHHH
Q 027403 127 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA--GLHTVIVGSSVP--VPPADHALNSIHNIKE 196 (224)
Q Consensus 127 ~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~--G~~~v~v~~~~~--~~~~d~~i~~~~dl~~ 196 (224)
||+|++|..+++++| |++++||||+..|+.+|+++ |++++++.++.. .+.++|.++|+.|+.+
T Consensus 130 -----~~kp~~~~~a~~~~~--~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (197)
T PHA02597 130 -----ESKEKLFIKAKEKYG--DRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGERDHIPKLAHRVKSWNDIEN 196 (197)
T ss_pred -----cccHHHHHHHHHHhC--CCcEEEeCCCHHHHHHHHHHHcCCcEEEecchhhccccchhhhhccHHHHhc
Confidence 778899999999999 89999999999999999999 999999999975 2346789999998864
No 44
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.68 E-value=5e-16 Score=158.00 Aligned_cols=118 Identities=19% Similarity=0.273 Sum_probs=108.4
Q ss_pred CCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCc-cccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403 55 LKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLE-DCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 130 (224)
Q Consensus 55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~-~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (224)
..++||+.++|+.|+ ++++|+||++...+...++++|+. .+|+.+++++++...
T Consensus 160 ~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~---------------------- 217 (1057)
T PLN02919 160 GIGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENL---------------------- 217 (1057)
T ss_pred CccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccC----------------------
Confidence 357999999999997 789999999999999999999995 799999999998764
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC-----CCCCceEeCCHhHHH
Q 027403 131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHALNSIHNIK 195 (224)
Q Consensus 131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~-----~~~~d~~i~~~~dl~ 195 (224)
||+|++|..++++++++|++|++|||+..|+++|+++|+++|++.++.. ..+++++++++.++.
T Consensus 218 -KP~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~ 286 (1057)
T PLN02919 218 -KPAPDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNIS 286 (1057)
T ss_pred -CCCHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCC
Confidence 9999999999999999999999999999999999999999999998753 456899999999974
No 45
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=99.65 E-value=4e-16 Score=124.67 Aligned_cols=101 Identities=22% Similarity=0.286 Sum_probs=82.7
Q ss_pred CCCChhHHHHHhcCC---CCeEEEeCCCh---------------HHHHHHHHHcCCccc--cceeEe-eccCCCCCCCCC
Q 027403 55 LKPDPVLRNLLLSMP---QRKIIFTNADQ---------------KHAMEVLGRLGLEDC--FEGIIC-FETINPRLQPAD 113 (224)
Q Consensus 55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~---------------~~~~~~l~~lgl~~~--fd~ii~-~~~~~~~~~~~~ 113 (224)
++++||+.++|+.|+ ++++|+||+++ ..+...++++|+... |..+.+ ++....
T Consensus 26 ~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~------ 99 (147)
T TIGR01656 26 WQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNCSC------ 99 (147)
T ss_pred eEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCCCC------
Confidence 578999999999996 78899999874 567778899998621 211111 333333
Q ss_pred CCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCC
Q 027403 114 NTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS 178 (224)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~ 178 (224)
.||+|++|..++++++++|++|+||||+..|+++|+++|++++||.+|
T Consensus 100 -----------------~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 100 -----------------RKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLVDG 147 (147)
T ss_pred -----------------CCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEEEecCC
Confidence 399999999999999999999999999999999999999999999865
No 46
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=99.64 E-value=8.1e-16 Score=125.41 Aligned_cols=101 Identities=18% Similarity=0.378 Sum_probs=88.3
Q ss_pred CCCCChhHHHHHhcCC---CCeEEEeCCC---------------hHHHHHHHHHcCCccccceeE-e----eccCCCCCC
Q 027403 54 KLKPDPVLRNLLLSMP---QRKIIFTNAD---------------QKHAMEVLGRLGLEDCFEGII-C----FETINPRLQ 110 (224)
Q Consensus 54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~---------------~~~~~~~l~~lgl~~~fd~ii-~----~~~~~~~~~ 110 (224)
.++++||+.++|+.|+ ++++|+||.+ ...+...++.+|+. |+.++ | +++...+
T Consensus 27 ~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~~~~-- 102 (161)
T TIGR01261 27 KLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDNCDCR-- 102 (161)
T ss_pred HeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCCCCCC--
Confidence 4789999999999996 6899999973 56788899999996 87665 4 3565554
Q ss_pred CCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCC
Q 027403 111 PADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 179 (224)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~ 179 (224)
||++.+|..++++++++|++++||||+.+|+.+|+++|+.++++.++-
T Consensus 103 ---------------------KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~~ 150 (161)
T TIGR01261 103 ---------------------KPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYDEEE 150 (161)
T ss_pred ---------------------CCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEEChhh
Confidence 999999999999999999999999999999999999999999998763
No 47
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=99.64 E-value=4.7e-16 Score=126.33 Aligned_cols=88 Identities=19% Similarity=0.262 Sum_probs=82.1
Q ss_pred CCCCChhHHHHHhcCCCCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCC
Q 027403 54 KLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 133 (224)
Q Consensus 54 ~~~~~~g~~~~L~~l~~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP 133 (224)
.+.++||+.++|+ +++|+||++...+...++++|+.++|+.++++++++.. ||
T Consensus 88 ~~~~~~g~~~~L~----~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~-----------------------KP 140 (175)
T TIGR01493 88 NLPPWPDSAAALA----RVAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVRAY-----------------------KP 140 (175)
T ss_pred cCCCCCchHHHHH----HHhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcCCC-----------------------CC
Confidence 4679999999999 47899999999999999999999999999999987764 99
Q ss_pred CHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHc
Q 027403 134 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA 168 (224)
Q Consensus 134 ~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~ 168 (224)
+|++|..+++++|++|++|+||||+.+|+.+|+++
T Consensus 141 ~p~~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 141 DPVVYELVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred CHHHHHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 99999999999999999999999999999999864
No 48
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=99.62 E-value=2.3e-15 Score=128.65 Aligned_cols=102 Identities=18% Similarity=0.220 Sum_probs=89.1
Q ss_pred CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHc---CCccccceeEeeccCCCCCCCCCCCCCcccccCCccc
Q 027403 54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRL---GLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQ 127 (224)
Q Consensus 54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~l---gl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (224)
...++||+.++|+.|+ ++++|+||++...+...++++ ++.++|+.++.. ..+
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~-~~g--------------------- 150 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDT-TVG--------------------- 150 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEe-Ccc---------------------
Confidence 4579999999999996 678999999999888888886 677788877643 222
Q ss_pred cccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC
Q 027403 128 RILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP 180 (224)
Q Consensus 128 ~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~ 180 (224)
+||+|++|..+++++|++|++|+||||+..|+.+|+++|++++++.++..
T Consensus 151 ---~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g~ 200 (220)
T TIGR01691 151 ---LKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQLVRPGN 200 (220)
T ss_pred ---cCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEEEECCCC
Confidence 39999999999999999999999999999999999999999999987753
No 49
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.61 E-value=1.1e-15 Score=126.32 Aligned_cols=104 Identities=17% Similarity=0.253 Sum_probs=93.0
Q ss_pred CCCCCChhHHHHHhcCC---CCeEEEeCC-ChHHHHHHHHHcCCc---------cccceeEeeccCCCCCCCCCCCCCcc
Q 027403 53 EKLKPDPVLRNLLLSMP---QRKIIFTNA-DQKHAMEVLGRLGLE---------DCFEGIICFETINPRLQPADNTDGIE 119 (224)
Q Consensus 53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~-~~~~~~~~l~~lgl~---------~~fd~ii~~~~~~~~~~~~~~~~~~~ 119 (224)
....++||+.++|+.|+ .+++|+||+ +...++..++.+|+. ++|+.++++++...
T Consensus 42 ~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~------------ 109 (174)
T TIGR01685 42 TEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNK------------ 109 (174)
T ss_pred CEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCch------------
Confidence 45789999999999997 578899998 888899999999998 99999999987554
Q ss_pred cccCCccccccCCCCHHHHHHHHHHh--CCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCC
Q 027403 120 NNSFSSNQRILCKPSLEAIETAIRIA--NVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 179 (224)
Q Consensus 120 ~~~~~~~~~~~~KP~~~~~~~al~~~--~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~ 179 (224)
.||.+.++..+.+.+ +++|++|+||||+..|+.+|+++|++++++.++.
T Consensus 110 -----------~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~g~ 160 (174)
T TIGR01685 110 -----------AKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPSGM 160 (174)
T ss_pred -----------HHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCCCc
Confidence 388888888888877 8999999999999999999999999999998875
No 50
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=99.58 E-value=1.1e-14 Score=113.52 Aligned_cols=95 Identities=21% Similarity=0.347 Sum_probs=82.1
Q ss_pred CCCChhHHHHHhcCC---CCeEEEeCCC--------hHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccC
Q 027403 55 LKPDPVLRNLLLSMP---QRKIIFTNAD--------QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSF 123 (224)
Q Consensus 55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~--------~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~ 123 (224)
..++|++.++|+.|+ ++++|+||++ ...+...++++|+. |+.++.+. ..
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~--~~---------------- 83 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP--IDVLYACP--HC---------------- 83 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC--EEEEEECC--CC----------------
Confidence 578999999999996 6899999999 88899999999986 33333333 23
Q ss_pred CccccccCCCCHHHHHHHHHHh-CCCCCcEEEEeC-ChhcHHHHHHcCCeEEEEC
Q 027403 124 SSNQRILCKPSLEAIETAIRIA-NVDPKKTIFFDD-SARNIASAKAAGLHTVIVG 176 (224)
Q Consensus 124 ~~~~~~~~KP~~~~~~~al~~~-~~~~~~~l~VgD-s~~Di~~A~~~G~~~v~v~ 176 (224)
+||+|++|..+++++ +++|++++|||| +..|+.+|+++|+.+|++.
T Consensus 84 -------~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~ 131 (132)
T TIGR01662 84 -------RKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAFILVA 131 (132)
T ss_pred -------CCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeEEEee
Confidence 399999999999999 599999999999 7899999999999999985
No 51
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.55 E-value=2.5e-14 Score=118.97 Aligned_cols=89 Identities=24% Similarity=0.294 Sum_probs=80.6
Q ss_pred CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403 56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 132 (224)
Q Consensus 56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K 132 (224)
++.+++.++|+.|+ .+++|+||+++..+...++++|+..+|+.+++++++.. |
T Consensus 106 ~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~------------------------K 161 (197)
T TIGR01548 106 ETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDCPP------------------------K 161 (197)
T ss_pred ccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecCCCC------------------------C
Confidence 45555688888876 68999999999999999999999999999999998763 9
Q ss_pred CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHc
Q 027403 133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA 168 (224)
Q Consensus 133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~ 168 (224)
|+|..|..++++++++|++|++|||+.+|+++|+++
T Consensus 162 P~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 162 PNPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred cCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 999999999999999999999999999999999874
No 52
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.53 E-value=1.3e-14 Score=124.71 Aligned_cols=102 Identities=22% Similarity=0.298 Sum_probs=90.6
Q ss_pred CCCCChhHHHHHhcCCC---CeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403 54 KLKPDPVLRNLLLSMPQ---RKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 130 (224)
Q Consensus 54 ~~~~~~g~~~~L~~l~~---~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (224)
.++..+++.++|+.++. .++++||.+.. ....+..+|+..+||.++.|+..+..
T Consensus 111 ~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r-~~~~l~~~~l~~~fD~vv~S~e~g~~---------------------- 167 (237)
T KOG3085|consen 111 AWKYLDGMQELLQKLRKKGTILGIISNFDDR-LRLLLLPLGLSAYFDFVVESCEVGLE---------------------- 167 (237)
T ss_pred CceeccHHHHHHHHHHhCCeEEEEecCCcHH-HHHHhhccCHHHhhhhhhhhhhhccC----------------------
Confidence 56777888899999983 45688888766 44888999999999999999998876
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCC
Q 027403 131 CKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSV 179 (224)
Q Consensus 131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~ 179 (224)
||+|.+|+.+++.+++.|++|+||||+. +|+++|+++||+++.+.++.
T Consensus 168 -KPDp~If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~~ 216 (237)
T KOG3085|consen 168 -KPDPRIFQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNSI 216 (237)
T ss_pred -CCChHHHHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEcccc
Confidence 9999999999999999999999999997 68999999999999998654
No 53
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=99.52 E-value=3.9e-14 Score=112.76 Aligned_cols=90 Identities=21% Similarity=0.266 Sum_probs=82.1
Q ss_pred CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403 54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 130 (224)
Q Consensus 54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (224)
....+||+.++|+.|+ .+++|+||+++..+...++++ +..+|+.++++++.. .
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~~~-~---------------------- 117 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDEFG-A---------------------- 117 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCCCC-C----------------------
Confidence 4556799999999995 678999999999999999998 888999999988876 4
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcC
Q 027403 131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAG 169 (224)
Q Consensus 131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G 169 (224)
||+|++|..++++++++| +|++|||+..|+.+|+++|
T Consensus 118 -Kp~~~~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 118 -KPEPEIFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred -CcCHHHHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 999999999999999999 9999999999999999987
No 54
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=99.50 E-value=2.5e-13 Score=111.29 Aligned_cols=96 Identities=19% Similarity=0.257 Sum_probs=82.0
Q ss_pred CCCCCChhHHHHHhcCC---CCeEEEeCCC-hHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccc
Q 027403 53 EKLKPDPVLRNLLLSMP---QRKIIFTNAD-QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR 128 (224)
Q Consensus 53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~-~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (224)
....++|++.++|+.|+ .+++|+||++ ...+...++.+|+..++ ..
T Consensus 40 ~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~~---------~~--------------------- 89 (170)
T TIGR01668 40 DHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVLP---------HA--------------------- 89 (170)
T ss_pred CCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEEc---------CC---------------------
Confidence 34689999999999996 6789999998 57677777787764321 12
Q ss_pred ccCCCCHHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCC
Q 027403 129 ILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP 180 (224)
Q Consensus 129 ~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~ 180 (224)
.||+|.+|..+++++++++++|+||||+. .|+.+|+++|+.++++.++..
T Consensus 90 --~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v~~g~~ 140 (170)
T TIGR01668 90 --VKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILVEPLVH 140 (170)
T ss_pred --CCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEEccCcC
Confidence 39999999999999999999999999998 699999999999999998864
No 55
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=99.48 E-value=4.1e-14 Score=123.19 Aligned_cols=122 Identities=14% Similarity=0.195 Sum_probs=97.6
Q ss_pred CChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCC
Q 027403 57 PDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 133 (224)
Q Consensus 57 ~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP 133 (224)
.++++.+++..|+ .+++|+||.+.......+..+|+..+|+.+.++..... ...+||
T Consensus 121 ~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~~~~~i~~~~~~~~--------------------~~~gKP 180 (257)
T TIGR01458 121 SYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGPFVTALEYATDTKA--------------------TVVGKP 180 (257)
T ss_pred CHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchHHHHHHHHHhCCCc--------------------eeecCC
Confidence 3567777777775 56789999887766666667788888887665543322 122599
Q ss_pred CHHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCC--------CCCCceEeCCHhHHHHHH
Q 027403 134 SLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNIKEAI 198 (224)
Q Consensus 134 ~~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~--------~~~~d~~i~~~~dl~~~i 198 (224)
+|.+|..++++++++|++++||||+. .||.+|+++|+++++|.+|.. ...++++++++.++.+++
T Consensus 181 ~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~~l 254 (257)
T TIGR01458 181 SKTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVDLI 254 (257)
T ss_pred CHHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHHHH
Confidence 99999999999999999999999996 899999999999999998841 345899999999998765
No 56
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.48 E-value=2.3e-13 Score=114.38 Aligned_cols=130 Identities=18% Similarity=0.226 Sum_probs=95.0
Q ss_pred CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403 54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 130 (224)
Q Consensus 54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (224)
.++++||+.++|+.|+ .+++|+||+....+..+++.+|+..+|+..+..++... .+ ...+ ....
T Consensus 83 ~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~--------~~----~~~~-~~~~ 149 (219)
T TIGR00338 83 NLPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKL--------TG----LVEG-PIVD 149 (219)
T ss_pred cCCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEE--------EE----EecC-cccC
Confidence 3678999999999996 67899999999999999999999888865332221100 00 0000 0011
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCCCCCCceEeC--CHhHHHH
Q 027403 131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALN--SIHNIKE 196 (224)
Q Consensus 131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~~~~d~~i~--~~~dl~~ 196 (224)
++|++.+|..++++++++|++|+||||+.+|+.+|+++|+..++-+.......+++++. ++.++..
T Consensus 150 ~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~~~~~~~~~a~~~i~~~~~~~~~~ 217 (219)
T TIGR00338 150 ASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFNAKPKLQQKADICINKKDLTDILP 217 (219)
T ss_pred CcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeCCCHHHHHhchhccCCCCHHHHHh
Confidence 37899999999999999999999999999999999999998654322212345788876 5566554
No 57
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=99.46 E-value=1.7e-13 Score=112.16 Aligned_cols=94 Identities=20% Similarity=0.183 Sum_probs=79.8
Q ss_pred CChhHHHHHhcCC---CCeEEEeCCChH------------HHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccc
Q 027403 57 PDPVLRNLLLSMP---QRKIIFTNADQK------------HAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENN 121 (224)
Q Consensus 57 ~~~g~~~~L~~l~---~~~~I~Tn~~~~------------~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~ 121 (224)
++||+.++|+.|+ ++++|+||++.. .+...++++|+. ++.+++++....
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~--~~~ii~~~~~~~-------------- 106 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP--IQVLAATHAGLY-------------- 106 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC--EEEEEecCCCCC--------------
Confidence 6899999999996 679999998763 567889999985 355666665443
Q ss_pred cCCccccccCCCCHHHHHHHHHHhC--CCCCcEEEEeCCh--------hcHHHHHHcCCeEEEE
Q 027403 122 SFSSNQRILCKPSLEAIETAIRIAN--VDPKKTIFFDDSA--------RNIASAKAAGLHTVIV 175 (224)
Q Consensus 122 ~~~~~~~~~~KP~~~~~~~al~~~~--~~~~~~l~VgDs~--------~Di~~A~~~G~~~v~v 175 (224)
.||+|.++..++++++ ++|++++||||+. .|+++|+++|+++++-
T Consensus 107 ---------~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~~ 161 (166)
T TIGR01664 107 ---------RKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKYP 161 (166)
T ss_pred ---------CCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcCCh
Confidence 3999999999999999 9999999999996 6999999999998763
No 58
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=99.44 E-value=4.6e-13 Score=95.36 Aligned_cols=64 Identities=31% Similarity=0.482 Sum_probs=59.2
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEeCC-hhcHHHHHHcCCeEEEECCCCC--------CCCCceEeCCHhHH
Q 027403 131 CKPSLEAIETAIRIANVDPKKTIFFDDS-ARNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNI 194 (224)
Q Consensus 131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs-~~Di~~A~~~G~~~v~v~~~~~--------~~~~d~~i~~~~dl 194 (224)
+||+|.+|..+++++++++++++||||+ ..||.+|+++|+.+++|.+|.. ...++++++++.|+
T Consensus 3 gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e~ 75 (75)
T PF13242_consen 3 GKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKEA 75 (75)
T ss_dssp STTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGGH
T ss_pred CCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHhC
Confidence 4999999999999999999999999999 7899999999999999999864 35799999999885
No 59
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=99.44 E-value=1e-12 Score=112.33 Aligned_cols=136 Identities=20% Similarity=0.208 Sum_probs=110.1
Q ss_pred CCCCHHHHHHHHhccCC--CCCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcC-CccccceeEe--eccCC
Q 027403 35 YEFDNDEFHAFVHGKLP--YEKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLG-LEDCFEGIIC--FETIN 106 (224)
Q Consensus 35 ~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lg-l~~~fd~ii~--~~~~~ 106 (224)
...+.++|.+..+.... .....++||+.+++..|+ .++.++|++++..+...+.+++ +...|+.+++ ..++.
T Consensus 69 dp~s~ee~~~e~~~~~~~~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~ 148 (222)
T KOG2914|consen 69 DPVSREEFNKEEEEILDRLFMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVK 148 (222)
T ss_pred CCCCHHHHHHHHHHHHHHhccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCcccc
Confidence 45667777766554322 345788999999999997 6788999999999999999888 7888998887 44455
Q ss_pred CCCCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCC-CcEEEEeCChhcHHHHHHcCCeEEEECCCCC----C
Q 027403 107 PRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDP-KKTIFFDDSARNIASAKAAGLHTVIVGSSVP----V 181 (224)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~-~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~----~ 181 (224)
. +||+|++|..+++.+|..| ++|++++|++.++++|+++|+.+|++.+... .
T Consensus 149 ~-----------------------gKP~Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~~~~~~~~ 205 (222)
T KOG2914|consen 149 N-----------------------GKPDPDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVATPDLSNLFS 205 (222)
T ss_pred C-----------------------CCCCchHHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEEecCCCcchhhh
Confidence 4 4999999999999999998 9999999999999999999999999998432 3
Q ss_pred CCCceEeCCHhH
Q 027403 182 PPADHALNSIHN 193 (224)
Q Consensus 182 ~~~d~~i~~~~d 193 (224)
..++.++.++.+
T Consensus 206 ~~~~~~~~~~~~ 217 (222)
T KOG2914|consen 206 AGATLILESLED 217 (222)
T ss_pred hccceecccccc
Confidence 446666665544
No 60
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=99.42 E-value=5.1e-13 Score=117.77 Aligned_cols=109 Identities=16% Similarity=0.114 Sum_probs=91.1
Q ss_pred CCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCcc-ccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403 55 LKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLED-CFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 130 (224)
Q Consensus 55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~-~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (224)
-.++|++.++|+.|+ .+++++||++.......++++++.+ +|+.+++.+....+ -|... .
T Consensus 186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~~--~~~~~--------------~ 249 (300)
T PHA02530 186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMHF--QREQG--------------D 249 (300)
T ss_pred CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhhh--cccCC--------------C
Confidence 368899999999996 5788999999999999999999987 99998888731100 00000 0
Q ss_pred CCCCHHHHHHHHHHhCC-CCCcEEEEeCChhcHHHHHHcCCeEEEECCCC
Q 027403 131 CKPSLEAIETAIRIANV-DPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 179 (224)
Q Consensus 131 ~KP~~~~~~~al~~~~~-~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~ 179 (224)
.||+|.++..++++++. ++++|++|||+.+|+.+|+++|+++++|.||.
T Consensus 250 ~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g~ 299 (300)
T PHA02530 250 KRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPGD 299 (300)
T ss_pred CCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEecCCC
Confidence 39999999999999988 67999999999999999999999999998873
No 61
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=99.40 E-value=1.5e-12 Score=118.31 Aligned_cols=100 Identities=17% Similarity=0.328 Sum_probs=84.7
Q ss_pred CCCCCChhHHHHHhcCC---CCeEEEeCC---------------ChHHHHHHHHHcCCccccceeEee-----ccCCCCC
Q 027403 53 EKLKPDPVLRNLLLSMP---QRKIIFTNA---------------DQKHAMEVLGRLGLEDCFEGIICF-----ETINPRL 109 (224)
Q Consensus 53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~---------------~~~~~~~~l~~lgl~~~fd~ii~~-----~~~~~~~ 109 (224)
+.+.++||+.++|..|+ ++++|+||+ +...+...++.+|+. |+.++.+ ++...
T Consensus 27 ~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~--fd~i~i~~~~~sd~~~~-- 102 (354)
T PRK05446 27 DKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK--FDEVLICPHFPEDNCSC-- 102 (354)
T ss_pred ccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc--eeeEEEeCCcCcccCCC--
Confidence 45789999999999996 679999996 355677788999984 7776533 33333
Q ss_pred CCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECC
Q 027403 110 QPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGS 177 (224)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~ 177 (224)
+||+|.++..+++.++++|++++||||+.+|+.+|+++|++++++..
T Consensus 103 ---------------------rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v~~ 149 (354)
T PRK05446 103 ---------------------RKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIRYAR 149 (354)
T ss_pred ---------------------CCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEC
Confidence 39999999999999999999999999999999999999999999943
No 62
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=99.39 E-value=3.1e-12 Score=108.35 Aligned_cols=125 Identities=12% Similarity=0.085 Sum_probs=93.9
Q ss_pred CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCcc--cc--ceeEeeccCCCCCCCCCCCCCcccccCCcc
Q 027403 54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLED--CF--EGIICFETINPRLQPADNTDGIENNSFSSN 126 (224)
Q Consensus 54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~--~f--d~ii~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (224)
..+++||+.++|+.++ .+++|+||+....+...++++ +.. ++ +..++.+....
T Consensus 72 ~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~------------------- 131 (219)
T PRK09552 72 TAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITI------------------- 131 (219)
T ss_pred CCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEE-------------------
Confidence 3689999999999986 688999999999999999998 643 11 22222222222
Q ss_pred ccccCCCCHHH----------HHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCC-C----CCCCCceEeCCH
Q 027403 127 QRILCKPSLEA----------IETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS-V----PVPPADHALNSI 191 (224)
Q Consensus 127 ~~~~~KP~~~~----------~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~-~----~~~~~d~~i~~~ 191 (224)
.||+|.. ...++++++.++++|+|||||.+|+.+|+++|+.++ ... . ...-+.+.++++
T Consensus 132 ----~kp~p~~~~~~~~~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a--~~~l~~~~~~~~~~~~~~~~f 205 (219)
T PRK09552 132 ----TWPHPCDEHCQNHCGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA--RDFLITKCEELGIPYTPFETF 205 (219)
T ss_pred ----eccCCccccccccCCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee--HHHHHHHHHHcCCCccccCCH
Confidence 3666543 247889999999999999999999999999999433 211 0 133477789999
Q ss_pred hHHHHHHHHHHhh
Q 027403 192 HNIKEAIPEIWEG 204 (224)
Q Consensus 192 ~dl~~~i~~~~~~ 204 (224)
.|+.+.+.++++.
T Consensus 206 ~ei~~~l~~~~~~ 218 (219)
T PRK09552 206 HDVQTELKHLLEV 218 (219)
T ss_pred HHHHHHHHHHhcc
Confidence 9999999988863
No 63
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.39 E-value=3.3e-13 Score=108.18 Aligned_cols=92 Identities=16% Similarity=0.081 Sum_probs=83.3
Q ss_pred CCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCcc-ccceeEeeccCCCCCCCCCCCCCcccccCCccccccC
Q 027403 55 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLED-CFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 131 (224)
Q Consensus 55 ~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~-~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (224)
+.++||+.++|+.|+ ++++|+||+++..+..+++++++.. +|+.|++++++...
T Consensus 44 v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~~----------------------- 100 (148)
T smart00577 44 VKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVFV----------------------- 100 (148)
T ss_pred EEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECcccccc-----------------------
Confidence 568999999999997 6789999999999999999999864 56999999988764
Q ss_pred CCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeE
Q 027403 132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT 172 (224)
Q Consensus 132 KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~ 172 (224)
||. |..++++++.+|++|++|||+..|+.+|.++|+..
T Consensus 101 KP~---~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i 138 (148)
T smart00577 101 KGK---YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPI 138 (148)
T ss_pred CCe---EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEe
Confidence 887 99999999999999999999999999999888864
No 64
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.37 E-value=2.9e-12 Score=97.21 Aligned_cols=116 Identities=27% Similarity=0.365 Sum_probs=94.3
Q ss_pred CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403 53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 129 (224)
Q Consensus 53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (224)
....+++++.++|+.|+ .+++|+||+.+..+...++.+|+..+|+.+++++..... ..............
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~~~~~~~~~~~~ 93 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIY-------YPKEGLFLGGGPFD 93 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhh-------cccccccccccccc
Confidence 34689999999999997 578899999999999999999998889988887765431 00001112333344
Q ss_pred cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEE
Q 027403 130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 175 (224)
Q Consensus 130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v 175 (224)
.+||++..+..+++.++..++++++|||+.+|+..|+++|+++++|
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~v 139 (139)
T cd01427 94 IGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139 (139)
T ss_pred cCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence 4599999999999999999999999999999999999999999875
No 65
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=99.36 E-value=4.7e-13 Score=117.61 Aligned_cols=118 Identities=21% Similarity=0.224 Sum_probs=88.8
Q ss_pred CChhHHHHHhcCC--CCeEEEeCCChHHHH-HHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCC
Q 027403 57 PDPVLRNLLLSMP--QRKIIFTNADQKHAM-EVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 133 (224)
Q Consensus 57 ~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~-~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP 133 (224)
.++++.++|..|+ ..++|+||.+..... ..+...|+..+|+.+.++.... ....+||
T Consensus 144 ~y~~i~~~l~~L~~~g~~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g~~--------------------~~~~gKP 203 (279)
T TIGR01452 144 SYAKLREACAHLREPGCLFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGRQ--------------------PLVVGKP 203 (279)
T ss_pred CHHHHHHHHHHHhcCCCEEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhCCc--------------------eeccCCC
Confidence 4789999999986 346799998875431 1233446666777654321111 1112599
Q ss_pred CHHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCC--------------CCCCceEeCCHhHH
Q 027403 134 SLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP--------------VPPADHALNSIHNI 194 (224)
Q Consensus 134 ~~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~--------------~~~~d~~i~~~~dl 194 (224)
+|.+|..++++++++|++|+||||+. .||++|+++|+++++|.+|.. ...+|++++++.++
T Consensus 204 ~p~~~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l 279 (279)
T TIGR01452 204 SPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL 279 (279)
T ss_pred CHHHHHHHHHHhCCChhhEEEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence 99999999999999999999999996 899999999999999999853 13589999998764
No 66
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.35 E-value=6.3e-12 Score=103.63 Aligned_cols=111 Identities=14% Similarity=0.115 Sum_probs=88.5
Q ss_pred CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccc--
Q 027403 54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR-- 128 (224)
Q Consensus 54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 128 (224)
.+.++||+.++|+.|+ ++++|+||+....+...++++|+..+|+..+.+++.+.. .|...
T Consensus 78 ~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~---------------~p~~~~~ 142 (201)
T TIGR01491 78 EISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFI---------------QPDGIVR 142 (201)
T ss_pred hCCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeE---------------ecceeeE
Confidence 3679999999999996 688999999999999999999998888776665443321 01111
Q ss_pred ccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCC
Q 027403 129 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 179 (224)
Q Consensus 129 ~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~ 179 (224)
+..++++.++..+++++++++++++|||||.+|+.+|+++|+.++..+.+.
T Consensus 143 ~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~ 193 (201)
T TIGR01491 143 VTFDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGH 193 (201)
T ss_pred EccccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCcc
Confidence 122455678999999999999999999999999999999999877766554
No 67
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.35 E-value=5e-12 Score=102.04 Aligned_cols=112 Identities=19% Similarity=0.266 Sum_probs=92.1
Q ss_pred HHHHhcCCCCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHHH
Q 027403 62 RNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETA 141 (224)
Q Consensus 62 ~~~L~~l~~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~a 141 (224)
.+.|+.-.++++|+||++...+...++++|+..+|+. .||++..+..+
T Consensus 37 i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~~--------------------------------~~~k~~~~~~~ 84 (154)
T TIGR01670 37 IRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLYQG--------------------------------QSNKLIAFSDI 84 (154)
T ss_pred HHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEEec--------------------------------ccchHHHHHHH
Confidence 3344444478999999999999999999999877752 18899999999
Q ss_pred HHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCCHhH---HHHHHHHHHhhcC
Q 027403 142 IRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN---IKEAIPEIWEGEG 206 (224)
Q Consensus 142 l~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~~~d---l~~~i~~~~~~~~ 206 (224)
++++++++++|+||||+.+|+.+++++|+. +.+.+... ...+++++.+... +.+++.++++..+
T Consensus 85 ~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~-~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~~~~~~~~~ 153 (154)
T TIGR01670 85 LEKLALAPENVAYIGDDLIDWPVMEKVGLS-VAVADAHPLLIPRADYVTRIAGGRGAVREVCELLLLAQG 153 (154)
T ss_pred HHHcCCCHHHEEEECCCHHHHHHHHHCCCe-EecCCcCHHHHHhCCEEecCCCCCcHHHHHHHHHHHhhC
Confidence 999999999999999999999999999997 77776644 4557888877654 7888888776543
No 68
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.34 E-value=2e-11 Score=101.47 Aligned_cols=140 Identities=12% Similarity=0.087 Sum_probs=97.1
Q ss_pred CCHHHHHHHHhccCCCCCCCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCC
Q 027403 37 FDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADN 114 (224)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~ 114 (224)
++.+++...+. .++++||+.++|..|+ ++++|+||+....+...++++|+..+|+..+..++-...
T Consensus 55 ~~~~~i~~~~~------~~~~~pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~i------ 122 (205)
T PRK13582 55 LGLADIQEVIA------TLDPLPGAVEFLDWLRERFQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGMI------ 122 (205)
T ss_pred CCHHHHHHHHH------hCCCCCCHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCeE------
Confidence 45555544433 3678999999999997 678899999999999999999999888765443221100
Q ss_pred CCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCce-EeCCH
Q 027403 115 TDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADH-ALNSI 191 (224)
Q Consensus 115 ~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~-~i~~~ 191 (224)
.+. .+|.|.....++++++..+++|++||||.+|+.+|+++|+.. .+..+.. ...+++ +++++
T Consensus 123 ---------~~~----~~~~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v-~~~~~~~~~~~~~~~~~~~~~ 188 (205)
T PRK13582 123 ---------TGY----DLRQPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGI-LFRPPANVIAEFPQFPAVHTY 188 (205)
T ss_pred ---------ECc----cccccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCE-EECCCHHHHHhCCcccccCCH
Confidence 000 022233345556666767799999999999999999999854 4443321 223454 89999
Q ss_pred hHHHHHHHHHH
Q 027403 192 HNIKEAIPEIW 202 (224)
Q Consensus 192 ~dl~~~i~~~~ 202 (224)
.+|.+++....
T Consensus 189 ~el~~~l~~~~ 199 (205)
T PRK13582 189 DELLAAIDKAS 199 (205)
T ss_pred HHHHHHHHHHH
Confidence 99988776543
No 69
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=99.32 E-value=3.2e-12 Score=112.20 Aligned_cols=149 Identities=19% Similarity=0.238 Sum_probs=110.0
Q ss_pred CCCCCChhHHHHHhcCC---CCeEEEeCCCh---HHHHHHHHH-cCCccccceeEeeccCCCCCC----C--C-------
Q 027403 53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQ---KHAMEVLGR-LGLEDCFEGIICFETINPRLQ----P--A------- 112 (224)
Q Consensus 53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~---~~~~~~l~~-lgl~~~fd~ii~~~~~~~~~~----~--~------- 112 (224)
.+-+++||+.++|++|+ .+++++||++. ..+...|.. .++....+.|++|........ | +
T Consensus 21 ~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~~at~~~l~~~~~~~kv~viG~~ 100 (269)
T COG0647 21 RGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSGDATADYLAKQKPGKKVYVIGEE 100 (269)
T ss_pred eCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHHHHHHHHHHhhCCCCEEEEECCc
Confidence 56789999999999886 67889999875 345566666 555566666766644322111 1 1
Q ss_pred -----------------------------------------------------------------CCCCCcc-----ccc
Q 027403 113 -----------------------------------------------------------------DNTDGIE-----NNS 122 (224)
Q Consensus 113 -----------------------------------------------------------------~~~~~~~-----~~~ 122 (224)
..++-|+ -+.
T Consensus 101 ~l~~~l~~~G~~~~~~~~~~~~d~Vv~g~d~~~~~e~l~~a~~~i~~g~~fI~tNpD~~~p~~~g~~pgaGai~~~~~~~ 180 (269)
T COG0647 101 GLKEELEGAGFELVDEEEPARVDAVVVGLDRTLTYEKLAEALLAIAAGAPFIATNPDLTVPTERGLRPGAGAIAALLEQA 180 (269)
T ss_pred chHHHHHhCCcEEeccCCCCcccEEEEecCCCCCHHHHHHHHHHHHcCCcEEEeCCCccccCCCCCccCcHHHHHHHHHh
Confidence 1111111 122
Q ss_pred CCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCC--------CCCCceEeCCHhH
Q 027403 123 FSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHN 193 (224)
Q Consensus 123 ~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~--------~~~~d~~i~~~~d 193 (224)
++......|||++.+|+.+++.++.++++++||||+. .||.+|+++|+.++.|.+|.. ...++|+++|+.+
T Consensus 181 tg~~~~~~GKP~~~i~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~~~~~~p~~v~~sl~~ 260 (269)
T COG0647 181 TGREPTVIGKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRAEVKPTYVVDSLAE 260 (269)
T ss_pred hCCcccccCCCCHHHHHHHHHHhCCCcccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhhhhhhccCCcchHhhHHH
Confidence 2333358899999999999999999999999999998 599999999999999999964 3458999999999
Q ss_pred HHHHHHHH
Q 027403 194 IKEAIPEI 201 (224)
Q Consensus 194 l~~~i~~~ 201 (224)
+...+..+
T Consensus 261 ~~~~~~~~ 268 (269)
T COG0647 261 LITALKEL 268 (269)
T ss_pred HHhhhhcc
Confidence 98776543
No 70
>PLN02954 phosphoserine phosphatase
Probab=99.32 E-value=1.6e-11 Score=103.47 Aligned_cols=131 Identities=15% Similarity=0.199 Sum_probs=93.1
Q ss_pred CCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCc--cccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403 55 LKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLE--DCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 129 (224)
Q Consensus 55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~--~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (224)
..++||+.++|+.++ .+++|+||+....+...++.+|+. .+|+..+..+.-+. ..+.+. .....
T Consensus 83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~--------~~g~~~---~~~~~ 151 (224)
T PLN02954 83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGE--------YAGFDE---NEPTS 151 (224)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCc--------EECccC---CCccc
Confidence 568999999999996 578899999999999999999996 46654222211000 000000 00001
Q ss_pred cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC-----CCCCceEeCCHhHHHHHH
Q 027403 130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHALNSIHNIKEAI 198 (224)
Q Consensus 130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~-----~~~~d~~i~~~~dl~~~i 198 (224)
.++|+|.++..+++.++. ++|++|||+.+|+.+|+++|+.++....+.. ..+++++++++.+|.+++
T Consensus 152 ~~~~K~~~i~~~~~~~~~--~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~~ 223 (224)
T PLN02954 152 RSGGKAEAVQHIKKKHGY--KTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDLIEVL 223 (224)
T ss_pred CCccHHHHHHHHHHHcCC--CceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHHHHhh
Confidence 237788999999998874 6899999999999999998888665433221 335899999999998754
No 71
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=99.32 E-value=2e-11 Score=105.46 Aligned_cols=109 Identities=17% Similarity=0.145 Sum_probs=86.5
Q ss_pred HHHHHHhccCCCCCCCCChhHHHHHhcCC---CCeEEEeCC----ChHHHHHHHHHcCCccccceeEeeccCCCCCCCCC
Q 027403 41 EFHAFVHGKLPYEKLKPDPVLRNLLLSMP---QRKIIFTNA----DQKHAMEVLGRLGLEDCFEGIICFETINPRLQPAD 113 (224)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~I~Tn~----~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~ 113 (224)
.++..+..... ....+.+++.++|+.++ .+++++||+ +...+..+++++|+.++|+.++++++....
T Consensus 100 ~~w~~~~~~~~-~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~----- 173 (237)
T TIGR01672 100 VFWEKVNNGWD-EFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQY----- 173 (237)
T ss_pred HHHHHHHHhcc-cCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCCC-----
Confidence 45555543332 33467788999999996 578899998 666888889999999999988888876543
Q ss_pred CCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC
Q 027403 114 NTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP 180 (224)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~ 180 (224)
||++. .++++.++ ++||||+.+|+.+|+++|++++.+.++..
T Consensus 174 ------------------Kp~~~---~~l~~~~i----~i~vGDs~~DI~aAk~AGi~~I~V~~g~~ 215 (237)
T TIGR01672 174 ------------------QYTKT---QWIQDKNI----RIHYGDSDNDITAAKEAGARGIRILRASN 215 (237)
T ss_pred ------------------CCCHH---HHHHhCCC----eEEEeCCHHHHHHHHHCCCCEEEEEecCC
Confidence 88775 35566665 79999999999999999999999988754
No 72
>PLN02645 phosphoglycolate phosphatase
Probab=99.31 E-value=3e-12 Score=114.39 Aligned_cols=110 Identities=17% Similarity=0.143 Sum_probs=86.6
Q ss_pred CCeEEEeCCChHH-HHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCC
Q 027403 70 QRKIIFTNADQKH-AMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVD 148 (224)
Q Consensus 70 ~~~~I~Tn~~~~~-~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~ 148 (224)
...+|+||.+... ....+...|...+|+.+.++..... ...+||+|.+|..++++++++
T Consensus 187 g~~~i~tn~d~~~~~~~~~~~~g~g~~~~~i~~~~~~~~--------------------~~~gKP~p~~~~~a~~~~~~~ 246 (311)
T PLN02645 187 GCLFIATNRDAVTHLTDAQEWAGAGSMVGAIKGSTEREP--------------------LVVGKPSTFMMDYLANKFGIE 246 (311)
T ss_pred CCEEEEeCCCCCCCCCCCCCccchHHHHHHHHHHhCCCc--------------------ccCCCChHHHHHHHHHHcCCC
Confidence 4577999988643 2233345677778887766554322 123599999999999999999
Q ss_pred CCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCC------C----CCCceEeCCHhHHHHHHH
Q 027403 149 PKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP------V----PPADHALNSIHNIKEAIP 199 (224)
Q Consensus 149 ~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~------~----~~~d~~i~~~~dl~~~i~ 199 (224)
+++++||||+. .||.+|+++|+++++|.+|.. . ..++++++++.+|.+++.
T Consensus 247 ~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~~~~~ 308 (311)
T PLN02645 247 KSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFLTLKA 308 (311)
T ss_pred cccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHHHHhh
Confidence 99999999997 899999999999999988853 1 468999999999987654
No 73
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=99.28 E-value=1e-11 Score=107.68 Aligned_cols=69 Identities=20% Similarity=0.328 Sum_probs=60.5
Q ss_pred cccccCCCCHHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCC------C--CCCceEeCCHhHH
Q 027403 126 NQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP------V--PPADHALNSIHNI 194 (224)
Q Consensus 126 ~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~------~--~~~d~~i~~~~dl 194 (224)
.....+||+|.+|+.+++.+++++++++||||+. .||.+|+++|+++++|.+|.. . ..++++++++.++
T Consensus 172 ~~~~~gKP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~~l~~~ 249 (249)
T TIGR01457 172 KPVYIGKPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEVAGLPIAPTHVVSSLAEW 249 (249)
T ss_pred CccccCCChHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcEEEEcCCCCCHHHHhcCCCCCCEEeCChhhC
Confidence 4455679999999999999999999999999997 799999999999999999853 1 4589999988764
No 74
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=99.27 E-value=9.9e-11 Score=97.13 Aligned_cols=125 Identities=19% Similarity=0.324 Sum_probs=100.8
Q ss_pred CCCCCChhHHHHHhcCC---CCeEEEeCCC---------------hHHHHHHHHHcCCccccceeEeeccCCCCCCCCCC
Q 027403 53 EKLKPDPVLRNLLLSMP---QRKIIFTNAD---------------QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADN 114 (224)
Q Consensus 53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~---------------~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~ 114 (224)
+.+...||+.++|+.++ ++++|+||.+ +..+...|+..|. .||.|..+-+.+.
T Consensus 28 ~~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv--~id~i~~Cph~p~------- 98 (181)
T COG0241 28 DDFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGV--KIDGILYCPHHPE------- 98 (181)
T ss_pred HHhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCC-------
Confidence 34778899999999985 8999999954 3467777888776 5898887766654
Q ss_pred CCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCCC-----CCCceEeC
Q 027403 115 TDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPV-----PPADHALN 189 (224)
Q Consensus 115 ~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~-----~~~d~~i~ 189 (224)
++|.| +||++.++..++++.++++++.++|||...|+++|.++|+..+.+.++... ...+..++
T Consensus 99 -----~~c~c------RKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~~~~~~~~~~~~~~~~~ 167 (181)
T COG0241 99 -----DNCDC------RKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTGIGVTTDGAGRAKWVFD 167 (181)
T ss_pred -----CCCcc------cCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEcCcccccccccccccccc
Confidence 23444 699999999999999999999999999999999999999998888777542 23567788
Q ss_pred CHhHHHHH
Q 027403 190 SIHNIKEA 197 (224)
Q Consensus 190 ~~~dl~~~ 197 (224)
++.++..+
T Consensus 168 ~~~~~~~~ 175 (181)
T COG0241 168 SLAEFANL 175 (181)
T ss_pred cHHHHHHH
Confidence 88777743
No 75
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=99.26 E-value=7.9e-12 Score=97.95 Aligned_cols=85 Identities=19% Similarity=0.182 Sum_probs=75.1
Q ss_pred CCChhHHHHHhcCC---CCeEEEeCC-ChHHHHHHHHHcC-------CccccceeEeeccCCCCCCCCCCCCCcccccCC
Q 027403 56 KPDPVLRNLLLSMP---QRKIIFTNA-DQKHAMEVLGRLG-------LEDCFEGIICFETINPRLQPADNTDGIENNSFS 124 (224)
Q Consensus 56 ~~~~g~~~~L~~l~---~~~~I~Tn~-~~~~~~~~l~~lg-------l~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~ 124 (224)
+++||+.++|+.|+ ++++|+||+ +...+...+++++ +.++|+.++++++
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~~-------------------- 88 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGYW-------------------- 88 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcCC--------------------
Confidence 47999999999996 678899999 8888888899998 7889998887753
Q ss_pred ccccccCCCCHHHHHHHHHHhC--CCCCcEEEEeCChhcHHHHHH
Q 027403 125 SNQRILCKPSLEAIETAIRIAN--VDPKKTIFFDDSARNIASAKA 167 (224)
Q Consensus 125 ~~~~~~~KP~~~~~~~al~~~~--~~~~~~l~VgDs~~Di~~A~~ 167 (224)
+|+|.+|..+++++| ++|++|+||||+..|+...++
T Consensus 89 -------~pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 89 -------LPKSPRLVEIALKLNGVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred -------CcHHHHHHHHHHHhcCCCCcceEEEECCCHhHHHHHHh
Confidence 789999999999999 999999999999999877654
No 76
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=99.26 E-value=9.6e-11 Score=101.26 Aligned_cols=110 Identities=16% Similarity=0.208 Sum_probs=86.9
Q ss_pred CHHHHHHHHhccCCCCCCCCChhHHHHHhcCC---CCeEEEeCCC----hHHHHHHHHHcCC--ccccceeEeeccCCCC
Q 027403 38 DNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP---QRKIIFTNAD----QKHAMEVLGRLGL--EDCFEGIICFETINPR 108 (224)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~I~Tn~~----~~~~~~~l~~lgl--~~~fd~ii~~~~~~~~ 108 (224)
+..+|+..+..... ....|+||+.++|+.++ .+++++||++ ...+..+++.+|+ .++|+.+++.++. .
T Consensus 97 ~~~~fw~~y~~~~~-~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--~ 173 (237)
T PRK11009 97 KNQKFWEKMNNGWD-EFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--G 173 (237)
T ss_pred ChHHHHHHHHhccc-ccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC--C
Confidence 46678887766432 34779999999999995 6789999965 3456666777999 8899888877653 2
Q ss_pred CCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC
Q 027403 109 LQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP 180 (224)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~ 180 (224)
||++.. .++++++ ++||||+.+|+.+|+++|++++.+.|+..
T Consensus 174 -----------------------K~~K~~---~l~~~~i----~I~IGDs~~Di~aA~~AGi~~I~v~~G~~ 215 (237)
T PRK11009 174 -----------------------QYTKTQ---WLKKKNI----RIFYGDSDNDITAAREAGARGIRILRAAN 215 (237)
T ss_pred -----------------------CCCHHH---HHHhcCC----eEEEcCCHHHHHHHHHcCCcEEEEecCCC
Confidence 777754 5556665 89999999999999999999999999854
No 77
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.22 E-value=1e-10 Score=98.81 Aligned_cols=141 Identities=10% Similarity=0.091 Sum_probs=99.4
Q ss_pred CCCHHHHHHHHhccCCCCCCCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCC
Q 027403 36 EFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPAD 113 (224)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~ 113 (224)
+.+.+++...+. .++++||+.++|..++ .+++|+||+....+..+++++|+..+|..-+..++.+..
T Consensus 54 g~~~~~i~~~~~------~i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~----- 122 (203)
T TIGR02137 54 GLKLGDIQEVIA------TLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRV----- 122 (203)
T ss_pred CCCHHHHHHHHH------hCCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCee-----
Confidence 455566655443 2678999999999886 688999999999999999999998888632211110000
Q ss_pred CCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCCC-CCCc-eEeCCH
Q 027403 114 NTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPV-PPAD-HALNSI 191 (224)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~-~~~d-~~i~~~ 191 (224)
.+. ....||.+..+...+++.+. ++++||||.+|+..+..+|...++...+.-. .-++ -++.++
T Consensus 123 ----------tG~-~~~~~~~K~~~l~~l~~~~~---~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~~~~~~ 188 (203)
T TIGR02137 123 ----------VGY-QLRQKDPKRQSVIAFKSLYY---RVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVHTY 188 (203)
T ss_pred ----------ECe-eecCcchHHHHHHHHHhhCC---CEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCCCcccCH
Confidence 000 00126666666666666663 7999999999999999999998888777542 2233 368889
Q ss_pred hHHHHHHHHH
Q 027403 192 HNIKEAIPEI 201 (224)
Q Consensus 192 ~dl~~~i~~~ 201 (224)
.+|.+.+.+.
T Consensus 189 ~~~~~~~~~~ 198 (203)
T TIGR02137 189 EDLKREFLKA 198 (203)
T ss_pred HHHHHHHHHH
Confidence 9998877654
No 78
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.21 E-value=5.4e-11 Score=107.08 Aligned_cols=121 Identities=15% Similarity=0.139 Sum_probs=93.4
Q ss_pred CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccce-------eEeeccCCCCCCCCCCCCCcccccC
Q 027403 54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEG-------IICFETINPRLQPADNTDGIENNSF 123 (224)
Q Consensus 54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~-------ii~~~~~~~~~~~~~~~~~~~~~~~ 123 (224)
.++++||+.++|+.|+ ++++|+||+....+...++++|+...+.. .+++...+.
T Consensus 179 ~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~---------------- 242 (322)
T PRK11133 179 NLPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLGD---------------- 242 (322)
T ss_pred hCCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecCc----------------
Confidence 4779999999999987 68899999999888899999998654432 222221110
Q ss_pred CccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCCCCCCceEeCCHhHHH
Q 027403 124 SSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIK 195 (224)
Q Consensus 124 ~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~~~~d~~i~~~~dl~ 195 (224)
...+||++..+..+++++|+++++|++|||+.||+..++++|+..++-..+.-...++++++ ..+|.
T Consensus 243 ----iv~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~nAkp~Vk~~Ad~~i~-~~~l~ 309 (322)
T PRK11133 243 ----IVDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAYHAKPKVNEQAQVTIR-HADLM 309 (322)
T ss_pred ----cCCcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEeCCCHHHHhhCCEEec-CcCHH
Confidence 01139999999999999999999999999999999999999998777334333667899886 44443
No 79
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.21 E-value=5.7e-11 Score=97.74 Aligned_cols=111 Identities=17% Similarity=0.190 Sum_probs=86.0
Q ss_pred HHHHhcCCCCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHHH
Q 027403 62 RNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETA 141 (224)
Q Consensus 62 ~~~L~~l~~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~a 141 (224)
...|++.+.+++|+||++...++..++++|+..+|+. .||+|..+..+
T Consensus 43 ~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~~--------------------------------~kpkp~~~~~~ 90 (169)
T TIGR02726 43 VIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHEG--------------------------------IKKKTEPYAQM 90 (169)
T ss_pred HHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEec--------------------------------CCCCHHHHHHH
Confidence 4566677789999999999999999999999988863 18899999999
Q ss_pred HHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCCHh---HHHHHHHHHHhhc
Q 027403 142 IRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIH---NIKEAIPEIWEGE 205 (224)
Q Consensus 142 l~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~~~---dl~~~i~~~~~~~ 205 (224)
++++++++++|++|||+.+|+.+++.+|+..+ +.+... ...++++..+-. -+.+++..++...
T Consensus 91 ~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~a-m~nA~~~lk~~A~~I~~~~~~~g~v~e~~e~il~~~ 158 (169)
T TIGR02726 91 LEEMNISDAEVCYVGDDLVDLSMMKRVGLAVA-VGDAVADVKEAAAYVTTARGGHGAVREVAELILKAQ 158 (169)
T ss_pred HHHcCcCHHHEEEECCCHHHHHHHHHCCCeEE-CcCchHHHHHhCCEEcCCCCCCCHHHHHHHHHHHhc
Confidence 99999999999999999999999999999744 444322 444677654311 1344444455443
No 80
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.19 E-value=8.4e-11 Score=97.42 Aligned_cols=104 Identities=18% Similarity=0.315 Sum_probs=84.0
Q ss_pred HHHhcCCCCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHHHH
Q 027403 63 NLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAI 142 (224)
Q Consensus 63 ~~L~~l~~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al 142 (224)
..|+.-..+++|+||++...+...++.+|+..+|++ +++++..+..++
T Consensus 58 ~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f~g--------------------------------~~~k~~~l~~~~ 105 (183)
T PRK09484 58 RCLLTSGIEVAIITGRKSKLVEDRMTTLGITHLYQG--------------------------------QSNKLIAFSDLL 105 (183)
T ss_pred HHHHHCCCEEEEEeCCCcHHHHHHHHHcCCceeecC--------------------------------CCcHHHHHHHHH
Confidence 344444578999999999999999999998877752 277889999999
Q ss_pred HHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeC------CHhHHHHHHH
Q 027403 143 RIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALN------SIHNIKEAIP 199 (224)
Q Consensus 143 ~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~------~~~dl~~~i~ 199 (224)
+++|+++++|+||||+.+|+.+|+++|+.+ .+.+... ...++++++ .+.++.++|.
T Consensus 106 ~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~-~v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~ 169 (183)
T PRK09484 106 EKLAIAPEQVAYIGDDLIDWPVMEKVGLSV-AVADAHPLLLPRADYVTRIAGGRGAVREVCDLLL 169 (183)
T ss_pred HHhCCCHHHEEEECCCHHHHHHHHHCCCeE-ecCChhHHHHHhCCEEecCCCCCCHHHHHHHHHH
Confidence 999999999999999999999999999984 4554332 345789886 5677766543
No 81
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=99.19 E-value=6e-11 Score=100.18 Aligned_cols=125 Identities=13% Similarity=0.107 Sum_probs=91.9
Q ss_pred CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCcccc---ceeEeeccCCCCCCCCCCCCCcccccCCccc
Q 027403 54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCF---EGIICFETINPRLQPADNTDGIENNSFSSNQ 127 (224)
Q Consensus 54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~f---d~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (224)
..++.||+.++|+.++ .+++|+||+....+..++++++..+.+ +.++..+....
T Consensus 68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~-------------------- 127 (214)
T TIGR03333 68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHI-------------------- 127 (214)
T ss_pred cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEE--------------------
Confidence 3689999999999996 678899999999999999987543333 12222222222
Q ss_pred cccCCCCHHHH----------HHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCC-----CCCCCceEeCCHh
Q 027403 128 RILCKPSLEAI----------ETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV-----PVPPADHALNSIH 192 (224)
Q Consensus 128 ~~~~KP~~~~~----------~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~-----~~~~~d~~i~~~~ 192 (224)
.||+|..+ ..++++++..+++++|||||.+|+.+|+.+|+ +++.... ....+.+.++++.
T Consensus 128 ---~~p~~~~~~~~~~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~--~~ar~~l~~~~~~~~~~~~~~~~f~ 202 (214)
T TIGR03333 128 ---DWPHPCDGTCQNQCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDL--CFARDYLLNECEELGLNHAPFQDFY 202 (214)
T ss_pred ---eCCCCCccccccCCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCe--eEehHHHHHHHHHcCCCccCcCCHH
Confidence 36766654 36777777788999999999999999999998 4443321 1233566789999
Q ss_pred HHHHHHHHHHh
Q 027403 193 NIKEAIPEIWE 203 (224)
Q Consensus 193 dl~~~i~~~~~ 203 (224)
|+.+.++++++
T Consensus 203 di~~~l~~~~~ 213 (214)
T TIGR03333 203 DVRKELENVKE 213 (214)
T ss_pred HHHHHHHHHhc
Confidence 99999988775
No 82
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=99.18 E-value=1.6e-10 Score=94.15 Aligned_cols=124 Identities=14% Similarity=0.138 Sum_probs=86.7
Q ss_pred CCCCHHHHHHHHhccCCCCCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCC
Q 027403 35 YEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQP 111 (224)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~ 111 (224)
.+.+.+++...+.. ++++||+.++|+.|+ ++++|+||++...+...++++|+.++|+.+++++.....
T Consensus 57 ~~~~~~~~~~~~~~------~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~--- 127 (188)
T TIGR01489 57 SGLKEDEILEVLKS------APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDN--- 127 (188)
T ss_pred cCCCHHHHHHHHHh------CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECC---
Confidence 34556666665442 688999999999996 678999999999999999999999999999987653321
Q ss_pred CCCCCCcc-cccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCe
Q 027403 112 ADNTDGIE-NNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLH 171 (224)
Q Consensus 112 ~~~~~~~~-~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~ 171 (224)
....++. .+|-.......+.+++.+++.+.+.. +++++||||+.+|+.+|+++++-
T Consensus 128 -~g~~~~~~~~~~~~~~~~~g~~K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~ 184 (188)
T TIGR01489 128 -DGRHIVWPHHCHGCCSCPCGCCKGKVIHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVV 184 (188)
T ss_pred -CCcEEEecCCCCccCcCCCCCCHHHHHHHHHhhc---CceEEEECCCcchhchHhcCCcc
Confidence 0000000 00000000112355688888887665 79999999999999999998654
No 83
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=99.11 E-value=2.7e-10 Score=92.79 Aligned_cols=94 Identities=19% Similarity=0.399 Sum_probs=81.1
Q ss_pred CCCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccc
Q 027403 52 YEKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR 128 (224)
Q Consensus 52 ~~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (224)
.+....-|.+++.+..++ .+++|+||+....+....+++|+.-.+- .
T Consensus 42 wd~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~fi~~---------A--------------------- 91 (175)
T COG2179 42 WDNPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVPFIYR---------A--------------------- 91 (175)
T ss_pred ccCCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCceeec---------c---------------------
Confidence 445567789999999997 5788999999999999999999642221 1
Q ss_pred ccCCCCHHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHHHcCCeEEEECC
Q 027403 129 ILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGS 177 (224)
Q Consensus 129 ~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~ 177 (224)
.||.+..|..|++++++++++|+||||.. .|+.+++.+|++||.|..
T Consensus 92 --~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~P 139 (175)
T COG2179 92 --KKPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILVEP 139 (175)
T ss_pred --cCccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEEEEE
Confidence 49999999999999999999999999998 599999999999999954
No 84
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=99.08 E-value=8.8e-11 Score=101.01 Aligned_cols=97 Identities=20% Similarity=0.166 Sum_probs=76.1
Q ss_pred ChhHHHHHhcCCC--CeEEEeCCChHHHHHHHHHcCCcccccee--EeeccCCCCCCCCCCCCCcccccCCccccccCCC
Q 027403 58 DPVLRNLLLSMPQ--RKIIFTNADQKHAMEVLGRLGLEDCFEGI--ICFETINPRLQPADNTDGIENNSFSSNQRILCKP 133 (224)
Q Consensus 58 ~~g~~~~L~~l~~--~~~I~Tn~~~~~~~~~l~~lgl~~~fd~i--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP 133 (224)
++++.++|+.+.. ...|+||.+.......+.++|...+|..+ ++.+.... +||
T Consensus 140 ~~~~~~~l~~l~~~g~~~i~tN~d~~~~~~~~~~~~~g~~~~~i~~~g~~~~~~-----------------------gKP 196 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPNICANPDRGINQHGIYRYGAGYYAELIKQLGGKVIYS-----------------------GKP 196 (242)
T ss_pred HHHHHHHHHHHHhCCCcEEEECCCEeccCCCceEecccHHHHHHHHhCCcEecC-----------------------CCC
Confidence 6888888887642 22488999887776667777777677654 34433222 599
Q ss_pred CHHHHHHHHHHhCCC-CCcEEEEeCC-hhcHHHHHHcCCeEEEECC
Q 027403 134 SLEAIETAIRIANVD-PKKTIFFDDS-ARNIASAKAAGLHTVIVGS 177 (224)
Q Consensus 134 ~~~~~~~al~~~~~~-~~~~l~VgDs-~~Di~~A~~~G~~~v~v~~ 177 (224)
+|.+|+.++++++.. +++++||||+ ..||.+|+++|+++++|.+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~t 242 (242)
T TIGR01459 197 YPAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDTALVLT 242 (242)
T ss_pred CHHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeEEEEeC
Confidence 999999999999975 6789999999 5899999999999999853
No 85
>PRK10444 UMP phosphatase; Provisional
Probab=99.00 E-value=1.4e-09 Score=94.41 Aligned_cols=70 Identities=24% Similarity=0.275 Sum_probs=62.6
Q ss_pred ccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCC--------CCCCceEeCCHhHH
Q 027403 125 SNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNI 194 (224)
Q Consensus 125 ~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~--------~~~~d~~i~~~~dl 194 (224)
......+||+|.+|..+++.+++++++|+||||+. .||.+|+++|+++++|.+|.. ...++++++|+.++
T Consensus 167 ~~~~~~gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el 245 (248)
T PRK10444 167 RKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVADI 245 (248)
T ss_pred CCccccCCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHh
Confidence 34455689999999999999999999999999997 799999999999999999853 25689999999887
No 86
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=98.99 E-value=8.5e-10 Score=91.26 Aligned_cols=87 Identities=23% Similarity=0.354 Sum_probs=75.0
Q ss_pred CCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccC
Q 027403 55 LKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 131 (224)
Q Consensus 55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (224)
-.+.|++.++|+.|+ .+++++||.+...+....+.+|+ ++.++.++.. .
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi---~~~~v~a~~~--~----------------------- 177 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGI---FDSIVFARVI--G----------------------- 177 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTS---CSEEEEESHE--T-----------------------
T ss_pred CcchhhhhhhhhhhhccCcceeeeecccccccccccccccc---cccccccccc--c-----------------------
Confidence 367899999999997 46889999999999999999998 3433444322 2
Q ss_pred CCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcC
Q 027403 132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAG 169 (224)
Q Consensus 132 KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G 169 (224)
||.+.+|..+++.+++++.+|+||||+.||+.+++++|
T Consensus 178 kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 178 KPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp TTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred cccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 99999999999999999999999999999999999987
No 87
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=98.96 E-value=1.8e-09 Score=96.89 Aligned_cols=88 Identities=16% Similarity=0.183 Sum_probs=79.1
Q ss_pred CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHH----cCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccc
Q 027403 56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGR----LGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR 128 (224)
Q Consensus 56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~----lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (224)
.+++|+.++|+.|+ ..++|+||++...+...+++ +++.++|+.+.++
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~-------------------------- 84 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSIN-------------------------- 84 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEe--------------------------
Confidence 46899999999997 56779999999999999999 9999999887544
Q ss_pred ccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCe
Q 027403 129 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLH 171 (224)
Q Consensus 129 ~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~ 171 (224)
+||+|..+..+++++|+.+++++||||++.|+.++++++-.
T Consensus 85 --~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 85 --WGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPV 125 (320)
T ss_pred --cCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCC
Confidence 29999999999999999999999999999999999997654
No 88
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=98.95 E-value=8.8e-09 Score=90.88 Aligned_cols=114 Identities=13% Similarity=0.077 Sum_probs=88.6
Q ss_pred cCCCCHHHHHHHHhccCCCCCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCC
Q 027403 34 GYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQ 110 (224)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~ 110 (224)
+..++.+++...+.+ +.+.+.||+.++++.|+ .+++|+|++....+..+++++|+.+.+..|++..-..
T Consensus 103 ~~~~~~e~i~~~v~~----~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f---- 174 (277)
T TIGR01544 103 QQAFPKAKIKEIVAE----SDVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDF---- 174 (277)
T ss_pred cCCCCHHHHHHHHhh----cCCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEE----
Confidence 566677777777653 45889999999999996 6799999999999999999999877777765433211
Q ss_pred CCCCCCCcccccCCccccccCCCCH---------HHHHHHHHHhC--CCCCcEEEEeCChhcHHHHHHc
Q 027403 111 PADNTDGIENNSFSSNQRILCKPSL---------EAIETAIRIAN--VDPKKTIFFDDSARNIASAKAA 168 (224)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~KP~~---------~~~~~al~~~~--~~~~~~l~VgDs~~Di~~A~~~ 168 (224)
...++..|||.| .++..+.+.++ .++++|++||||.+|+.+|.-.
T Consensus 175 -------------~~dGvltG~~~P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 175 -------------DEDGVLKGFKGPLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred -------------CCCCeEeCCCCCcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCC
Confidence 112233457777 77778888888 7899999999999999997644
No 89
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=98.93 E-value=2.4e-09 Score=102.01 Aligned_cols=89 Identities=26% Similarity=0.303 Sum_probs=76.5
Q ss_pred CChhHHHHHhcCC---CCeEEEeCCCh------------HHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccc
Q 027403 57 PDPVLRNLLLSMP---QRKIIFTNADQ------------KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENN 121 (224)
Q Consensus 57 ~~~g~~~~L~~l~---~~~~I~Tn~~~------------~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~ 121 (224)
++||+.+.|+.|+ ++++|+||.+. ..+..+++++|+. |+.+++.++...+
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdviia~~~~~~R------------- 262 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQVFIAIGAGFYR------------- 262 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEEEEeCCCCCCC-------------
Confidence 5899999999996 78999999876 4578899999985 8888877765554
Q ss_pred cCCccccccCCCCHHHHHHHHHHhC----CCCCcEEEEeCChhcHHHHHHcCC
Q 027403 122 SFSSNQRILCKPSLEAIETAIRIAN----VDPKKTIFFDDSARNIASAKAAGL 170 (224)
Q Consensus 122 ~~~~~~~~~~KP~~~~~~~al~~~~----~~~~~~l~VgDs~~Di~~A~~~G~ 170 (224)
||+|.++..++++++ +++++++||||+..|+.+|+++|-
T Consensus 263 ----------KP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaagr~~~g~~ag~ 305 (526)
T TIGR01663 263 ----------KPLTGMWDHLKEEANDGTEIQEDDCFFVGDAAGRPANGKAAGK 305 (526)
T ss_pred ----------CCCHHHHHHHHHhcCcccCCCHHHeEEeCCcccchHHHHhcCC
Confidence 999999999999995 899999999999988888776665
No 90
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.86 E-value=7.7e-09 Score=85.68 Aligned_cols=129 Identities=12% Similarity=0.090 Sum_probs=91.0
Q ss_pred CCCCHHHHHHHHhccCCC-CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccce-eEeeccCCCCC
Q 027403 35 YEFDNDEFHAFVHGKLPY-EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEG-IICFETINPRL 109 (224)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~-ii~~~~~~~~~ 109 (224)
.+.+.+++........+. -...++|++.++|+.++ .+++|+||++...+..+++++|+.++|.. +...++...
T Consensus 65 ~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~-- 142 (202)
T TIGR01490 65 AGLLEEDVRAIVEEFVNQKIESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIY-- 142 (202)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEE--
Confidence 355666665554433221 02468899999998885 57889999999999999999998877765 332222100
Q ss_pred CCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEEC
Q 027403 110 QPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG 176 (224)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~ 176 (224)
..+..+ ....++++...+...+++.++++++|+++|||.+|+..++.+|..++...
T Consensus 143 ----------~g~~~~-~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 143 ----------TGNIDG-NNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNP 198 (202)
T ss_pred ----------eCCccC-CCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCC
Confidence 000000 11124778888999999999999999999999999999999998765443
No 91
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=98.86 E-value=1.2e-08 Score=92.66 Aligned_cols=123 Identities=16% Similarity=0.206 Sum_probs=86.2
Q ss_pred CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHc-C-------CccccceeEeeccCCCCCCCCCCCCCccccc
Q 027403 54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRL-G-------LEDCFEGIICFETINPRLQPADNTDGIENNS 122 (224)
Q Consensus 54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~l-g-------l~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~ 122 (224)
.+.+.||+.++|+.|+ .+++|+||++...+...++.+ | +.++||.||++..-+..-...-.+--+ +.+
T Consensus 182 yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v-~~~ 260 (343)
T TIGR02244 182 YVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQV-DVE 260 (343)
T ss_pred HhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEE-eCC
Confidence 4678999999999996 678999999999999999996 7 889999998876543221100000000 000
Q ss_pred CCcc--cccc-CCCC----HHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHH-HcCCeEEEECC
Q 027403 123 FSSN--QRIL-CKPS----LEAIETAIRIANVDPKKTIFFDDSA-RNIASAK-AAGLHTVIVGS 177 (224)
Q Consensus 123 ~~~~--~~~~-~KP~----~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~-~~G~~~v~v~~ 177 (224)
.+.. .... -+|. ...+....+.+++++++++||||+. .||.+|+ .+||+|++|..
T Consensus 261 ~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~p 324 (343)
T TIGR02244 261 TGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIP 324 (343)
T ss_pred CCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEch
Confidence 0000 0000 0111 2456778889999999999999998 5999998 89999999954
No 92
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.77 E-value=2.7e-08 Score=80.43 Aligned_cols=104 Identities=16% Similarity=0.198 Sum_probs=76.4
Q ss_pred CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403 54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 130 (224)
Q Consensus 54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (224)
.+.+.||+.++|+.++ .+++|+|++....+...++++|+..+|...+..++-+.. .....+.....
T Consensus 71 ~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~-----------~g~~~~~~~~~ 139 (177)
T TIGR01488 71 QVALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLL-----------TGPIEGQVNPE 139 (177)
T ss_pred cCCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEE-----------eCccCCcccCC
Confidence 4567899999999886 678899999999999999999998777655444311110 00000001122
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHc
Q 027403 131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA 168 (224)
Q Consensus 131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~ 168 (224)
+..+...+...+++.+++++++++||||.+|+..++.+
T Consensus 140 ~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 140 GECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred cchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 46667888888999999999999999999999998753
No 93
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=98.73 E-value=3.9e-08 Score=88.30 Aligned_cols=71 Identities=17% Similarity=0.173 Sum_probs=60.2
Q ss_pred cccCCCCHHHHHHHHHHh--------CC-----CCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCC-------CCCCce
Q 027403 128 RILCKPSLEAIETAIRIA--------NV-----DPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP-------VPPADH 186 (224)
Q Consensus 128 ~~~~KP~~~~~~~al~~~--------~~-----~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~-------~~~~d~ 186 (224)
...|||++.+|+.+++.+ +. ++++++||||+. .||.+|+++||.+++|.+|.- ...+++
T Consensus 229 ~~~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~~~~~p~~ 308 (321)
T TIGR01456 229 YTLGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDLKECKPTL 308 (321)
T ss_pred EEcCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCCCCCCCCE
Confidence 466999999999999888 43 457999999998 799999999999999998732 234799
Q ss_pred EeCCHhHHHHHH
Q 027403 187 ALNSIHNIKEAI 198 (224)
Q Consensus 187 ~i~~~~dl~~~i 198 (224)
+++|+.|+...|
T Consensus 309 vv~~l~e~~~~i 320 (321)
T TIGR01456 309 IVNDVFDAVTKI 320 (321)
T ss_pred EECCHHHHHHHh
Confidence 999999998765
No 94
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=98.67 E-value=2e-08 Score=88.74 Aligned_cols=71 Identities=27% Similarity=0.326 Sum_probs=62.1
Q ss_pred cccCCCCHHHHHHHHHHhCCCCCcEEEEeCChh-cHHHHHHcCCeEEEECCCCC------------CCCCceEeCCHhHH
Q 027403 128 RILCKPSLEAIETAIRIANVDPKKTIFFDDSAR-NIASAKAAGLHTVIVGSSVP------------VPPADHALNSIHNI 194 (224)
Q Consensus 128 ~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~-Di~~A~~~G~~~v~v~~~~~------------~~~~d~~i~~~~dl 194 (224)
...|||++.+++.++++.+++|++++||||+.+ ||+-+++.|+.++++.+|.. ...+||+++++.++
T Consensus 220 ~v~GKP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~~~~~~~~~PDyy~~~l~d~ 299 (306)
T KOG2882|consen 220 IVLGKPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILEAQGDNKMVPDYYADSLGDL 299 (306)
T ss_pred eecCCCCHHHHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHHhcccccCCCCchHHhhHHHH
Confidence 445699999999999999999999999999996 99999999999999998853 23389999998888
Q ss_pred HHHH
Q 027403 195 KEAI 198 (224)
Q Consensus 195 ~~~i 198 (224)
...+
T Consensus 300 ~~~~ 303 (306)
T KOG2882|consen 300 LPLL 303 (306)
T ss_pred hhhc
Confidence 7654
No 95
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=98.64 E-value=1.4e-07 Score=90.31 Aligned_cols=109 Identities=17% Similarity=0.320 Sum_probs=83.7
Q ss_pred CCCChhHHHHHhcCC---C-CeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403 55 LKPDPVLRNLLLSMP---Q-RKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 130 (224)
Q Consensus 55 ~~~~~g~~~~L~~l~---~-~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (224)
-+++||+.++|+.|+ . +++++||.+...+...++++|+.++|..+. +
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~~~~------p----------------------- 411 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAELL------P----------------------- 411 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhhccC------c-----------------------
Confidence 368899999999996 5 788999999999999999999988775321 1
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEEC-CCCC--CCCCceEe--CCHhHHHHHH
Q 027403 131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG-SSVP--VPPADHAL--NSIHNIKEAI 198 (224)
Q Consensus 131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~-~~~~--~~~~d~~i--~~~~dl~~~i 198 (224)
+++. ..+++++...++++||||+.+|+.+++++|+ .+.++ .+.. ...+|+++ +++.+|.+++
T Consensus 412 -~~K~----~~i~~l~~~~~~v~~vGDg~nD~~al~~A~v-gia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i 478 (536)
T TIGR01512 412 -EDKL----EIVKELREKYGPVAMVGDGINDAPALAAADV-GIAMGASGSDVAIETADVVLLNDDLSRLPQAI 478 (536)
T ss_pred -HHHH----HHHHHHHhcCCEEEEEeCCHHHHHHHHhCCE-EEEeCCCccHHHHHhCCEEEECCCHHHHHHHH
Confidence 2233 3556666667899999999999999999996 23333 2211 34589988 8999998766
No 96
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=98.64 E-value=1.2e-08 Score=83.13 Aligned_cols=96 Identities=16% Similarity=0.104 Sum_probs=82.2
Q ss_pred CCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCcc-ccceeEeeccCCCCCCCCCCCCCcccccCCccccccC
Q 027403 55 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLED-CFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 131 (224)
Q Consensus 55 ~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~-~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (224)
+..-||+.++|+.|. +.++|.|++++.++..++++++... +|+.+++.++....
T Consensus 41 v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~~----------------------- 97 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDILDRGGKVISRRLYRESCVFT----------------------- 97 (162)
T ss_pred EEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEEe-----------------------
Confidence 467799999999997 7899999999999999999999875 89998887776542
Q ss_pred CCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEEC
Q 027403 132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG 176 (224)
Q Consensus 132 KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~ 176 (224)
+|+ |...++.+|.++++|++|||++.++..+..+|+.+....
T Consensus 98 ~~~---~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~~f~ 139 (162)
T TIGR02251 98 NGK---YVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIKSWF 139 (162)
T ss_pred CCC---EEeEchhcCCChhhEEEEeCChhhhccCccCEeecCCCC
Confidence 555 677788899999999999999999999999998765443
No 97
>PTZ00445 p36-lilke protein; Provisional
Probab=98.63 E-value=1.3e-07 Score=80.23 Aligned_cols=110 Identities=15% Similarity=0.115 Sum_probs=77.7
Q ss_pred CChhHHHHHhcCC---CCeEEEeCCChH---------------HHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCc
Q 027403 57 PDPVLRNLLLSMP---QRKIIFTNADQK---------------HAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGI 118 (224)
Q Consensus 57 ~~~g~~~~L~~l~---~~~~I~Tn~~~~---------------~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~ 118 (224)
.-|+...++.+|+ .+++|+|=+++. .+...++..+-.--.+.+++..-...
T Consensus 76 ~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w----------- 144 (219)
T PTZ00445 76 VTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFW----------- 144 (219)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCccc-----------
Confidence 4577888888885 789999988874 46666776554322333433221100
Q ss_pred ccccCCccccccCCCCHHH--H--HHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCC
Q 027403 119 ENNSFSSNQRILCKPSLEA--I--ETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS 178 (224)
Q Consensus 119 ~~~~~~~~~~~~~KP~~~~--~--~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~ 178 (224)
.+-.-=.+.-+.||.|.+ | +.++++.|++|++++||+|+..++.+|++.|+.++.+..+
T Consensus 145 -~~p~~y~~~gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~~ 207 (219)
T PTZ00445 145 -QEPSDYRPLGLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTGN 207 (219)
T ss_pred -CChhhhhhhcccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCCh
Confidence 000000112334999999 9 9999999999999999999999999999999999999754
No 98
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=98.61 E-value=2.5e-07 Score=79.55 Aligned_cols=90 Identities=13% Similarity=0.078 Sum_probs=73.2
Q ss_pred CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHH--HHHHHcCCcc-ccceeEeeccCCCCCCCCCCCCCcccccCCcc
Q 027403 53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAM--EVLGRLGLED-CFEGIICFETINPRLQPADNTDGIENNSFSSN 126 (224)
Q Consensus 53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~--~~l~~lgl~~-~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (224)
....++||+.++|+.|+ ++++++||+++.... ..++++|+.. +|+.|+++++..
T Consensus 21 ~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~-------------------- 80 (242)
T TIGR01459 21 DGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEIA-------------------- 80 (242)
T ss_pred cCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHHH--------------------
Confidence 34678999999999997 578899999887655 7899999987 999999988653
Q ss_pred ccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCC
Q 027403 127 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGL 170 (224)
Q Consensus 127 ~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~ 170 (224)
...+..++++++.+++++++|||+..|+......|.
T Consensus 81 --------~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 81 --------VQMILESKKRFDIRNGIIYLLGHLENDIINLMQCYT 116 (242)
T ss_pred --------HHHHHhhhhhccCCCceEEEeCCcccchhhhcCCCc
Confidence 135666677888889999999999999887755544
No 99
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=98.58 E-value=9.2e-08 Score=80.80 Aligned_cols=73 Identities=22% Similarity=0.402 Sum_probs=63.3
Q ss_pred cccCCCCHHHHHHHHHHhCCCCCcEEEEeCChh-cHHHHHHcCCeEEEECCCCC--------CCCCceEeCCHhHHHHHH
Q 027403 128 RILCKPSLEAIETAIRIANVDPKKTIFFDDSAR-NIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNIKEAI 198 (224)
Q Consensus 128 ~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~-Di~~A~~~G~~~v~v~~~~~--------~~~~d~~i~~~~dl~~~i 198 (224)
..-+||+|..|+.+++.+|++|++++||||..+ |+-+|.++||+.+.|.+|.- ...+|.++++|.|..++|
T Consensus 177 ~vvGKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~k~~~~p~~~~d~f~~AVd~I 256 (262)
T KOG3040|consen 177 TVVGKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEEKPPVPPDLTADNFADAVDLI 256 (262)
T ss_pred EEecCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeeccccCCcccccCCCCcchhhhhHHHHHHHH
Confidence 334699999999999999999999999999996 99999999999999988732 445788899998888877
Q ss_pred HH
Q 027403 199 PE 200 (224)
Q Consensus 199 ~~ 200 (224)
.+
T Consensus 257 ~q 258 (262)
T KOG3040|consen 257 IQ 258 (262)
T ss_pred Hh
Confidence 54
No 100
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=98.53 E-value=5.3e-07 Score=86.62 Aligned_cols=107 Identities=15% Similarity=0.274 Sum_probs=81.3
Q ss_pred CCCChhHHHHHhcCC----CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403 55 LKPDPVLRNLLLSMP----QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 130 (224)
Q Consensus 55 ~~~~~g~~~~L~~l~----~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (224)
-.++||+.++|+.|+ ++++|+||.+...+...++++|+.++|..+. +
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~~~~------p----------------------- 433 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHAELL------P----------------------- 433 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCeeeccCC------H-----------------------
Confidence 468999999999995 4678999999999999999999987776421 1
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC----CCCCceEeC--CHhHHHHHH
Q 027403 131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALN--SIHNIKEAI 198 (224)
Q Consensus 131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~----~~~~d~~i~--~~~dl~~~i 198 (224)
++++. ++++++..+.+|+||||+.+|+.+++++|+ ++.++.. ...+|+++. ++..+.+++
T Consensus 434 -~~K~~----~v~~l~~~~~~v~~vGDg~nD~~al~~A~v---gia~g~~~~~~~~~Ad~vi~~~~~~~l~~~i 499 (556)
T TIGR01525 434 -EDKLA----IVKELQEEGGVVAMVGDGINDAPALAAADV---GIAMGAGSDVAIEAADIVLLNDDLSSLPTAI 499 (556)
T ss_pred -HHHHH----HHHHHHHcCCEEEEEECChhHHHHHhhCCE---eEEeCCCCHHHHHhCCEEEeCCCHHHHHHHH
Confidence 22333 444455467899999999999999999994 4444422 345888887 677777765
No 101
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=98.49 E-value=2.1e-07 Score=79.99 Aligned_cols=50 Identities=26% Similarity=0.476 Sum_probs=46.3
Q ss_pred ccCCCCHHHHHHHHHHhCCCCCcE-EEEeCCh-hcHHHHHHcCCeEEEECCC
Q 027403 129 ILCKPSLEAIETAIRIANVDPKKT-IFFDDSA-RNIASAKAAGLHTVIVGSS 178 (224)
Q Consensus 129 ~~~KP~~~~~~~al~~~~~~~~~~-l~VgDs~-~Di~~A~~~G~~~v~v~~~ 178 (224)
..+||++.+|+.++++++++++++ +||||+. .||.+|+++|+++++|.+|
T Consensus 185 ~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G 236 (236)
T TIGR01460 185 VVGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLTG 236 (236)
T ss_pred eecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence 356999999999999999998887 9999998 7999999999999999875
No 102
>PRK08238 hypothetical protein; Validated
Probab=98.45 E-value=1.2e-06 Score=82.89 Aligned_cols=100 Identities=21% Similarity=0.297 Sum_probs=79.3
Q ss_pred CCCCCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcc
Q 027403 50 LPYEKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSN 126 (224)
Q Consensus 50 ~~~~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (224)
++.+.++..|++.++|+.++ .+++|+||+++..++..++++|+ ||.++++++...
T Consensus 66 ~d~~~lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl---Fd~Vigsd~~~~------------------- 123 (479)
T PRK08238 66 LDVATLPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL---FDGVFASDGTTN------------------- 123 (479)
T ss_pred CChhhCCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC---CCEEEeCCCccc-------------------
Confidence 34456778899999999996 57889999999999999999997 899999987654
Q ss_pred ccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCC
Q 027403 127 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 179 (224)
Q Consensus 127 ~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~ 179 (224)
+||++... .+.+.++ .++++++|||.+|+..++.+| +.+.|+.+.
T Consensus 124 ----~kg~~K~~-~l~~~l~--~~~~~yvGDS~~Dlp~~~~A~-~av~Vn~~~ 168 (479)
T PRK08238 124 ----LKGAAKAA-ALVEAFG--ERGFDYAGNSAADLPVWAAAR-RAIVVGASP 168 (479)
T ss_pred ----cCCchHHH-HHHHHhC--ccCeeEecCCHHHHHHHHhCC-CeEEECCCH
Confidence 26655432 3445555 356899999999999999999 678887553
No 103
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=98.42 E-value=1.4e-06 Score=84.05 Aligned_cols=107 Identities=17% Similarity=0.298 Sum_probs=79.4
Q ss_pred CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403 56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 132 (224)
Q Consensus 56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K 132 (224)
+++||+.++++.|+ ++++++||.+...+....+++|+. +|. + .. ++
T Consensus 405 ~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-~~~-----~-~~------------------------p~ 453 (562)
T TIGR01511 405 QLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-VRA-----E-VL------------------------PD 453 (562)
T ss_pred cccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-EEc-----c-CC------------------------hH
Confidence 68899999999986 678899999999999999999984 221 1 11 13
Q ss_pred CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEe--CCHhHHHHHH
Q 027403 133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAI 198 (224)
Q Consensus 133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i--~~~~dl~~~i 198 (224)
++... +++++.++++|+||||+.+|+.+++++|+. +.++.+.. ...+|+++ +++..|.+++
T Consensus 454 ~K~~~----v~~l~~~~~~v~~VGDg~nD~~al~~A~vg-ia~g~g~~~a~~~Advvl~~~~l~~l~~~i 518 (562)
T TIGR01511 454 DKAAL----IKELQEKGRVVAMVGDGINDAPALAQADVG-IAIGAGTDVAIEAADVVLMRNDLNDVATAI 518 (562)
T ss_pred HHHHH----HHHHHHcCCEEEEEeCCCccHHHHhhCCEE-EEeCCcCHHHHhhCCEEEeCCCHHHHHHHH
Confidence 34444 444444678999999999999999999973 44444332 34589988 4788887766
No 104
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=98.41 E-value=1e-06 Score=72.54 Aligned_cols=99 Identities=20% Similarity=0.323 Sum_probs=69.8
Q ss_pred CCCCCChhHHHHHhcCC---CCeEEEeCC-ChHHHHHHHHHcCCc----------cccceeEeeccCCCCCCCCCCCCCc
Q 027403 53 EKLKPDPVLRNLLLSMP---QRKIIFTNA-DQKHAMEVLGRLGLE----------DCFEGIICFETINPRLQPADNTDGI 118 (224)
Q Consensus 53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~-~~~~~~~~l~~lgl~----------~~fd~ii~~~~~~~~~~~~~~~~~~ 118 (224)
+.+.++|++.++|+.|+ .+++++|-+ ..+.++..|+.+++. ++|+. -.+.
T Consensus 42 ~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~----~eI~------------ 105 (169)
T PF12689_consen 42 EEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDY----LEIY------------ 105 (169)
T ss_dssp -EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECE----EEES------------
T ss_pred CEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcch----hhee------------
Confidence 35789999999999997 678899954 467999999999998 56654 1122
Q ss_pred ccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCC
Q 027403 119 ENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 179 (224)
Q Consensus 119 ~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~ 179 (224)
+-.+...|..+.++.|++.++.+|++|-.+++....+.|..++.+.+|.
T Consensus 106 ------------~gsK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~Gl 154 (169)
T PF12689_consen 106 ------------PGSKTTHFRRIHRKTGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPDGL 154 (169)
T ss_dssp ------------SS-HHHHHHHHHHHH---GGGEEEEES-HHHHHHHHTTT-EEEE-SSS-
T ss_pred ------------cCchHHHHHHHHHhcCCChhHEEEecCchhcceeeEecCcEEEEeCCCC
Confidence 2468999999999999999999999999999999999999999998864
No 105
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=98.38 E-value=1e-05 Score=67.22 Aligned_cols=113 Identities=18% Similarity=0.221 Sum_probs=90.5
Q ss_pred CCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHc---CCccccceeEeeccCCCCCCCCCCCCCcccccCCcccc
Q 027403 55 LKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRL---GLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR 128 (224)
Q Consensus 55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~l---gl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (224)
-.++|++.+.|++.+ .+++|.|+++.......+.+. .|..+|++.+-.. ++
T Consensus 102 ahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGyfDtt-iG---------------------- 158 (229)
T COG4229 102 AHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDTT-IG---------------------- 158 (229)
T ss_pred cccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcceeecc-cc----------------------
Confidence 468999999999987 689999999988777777654 2456677655442 22
Q ss_pred ccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCCCCCCc----eEeCCHh
Q 027403 129 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPAD----HALNSIH 192 (224)
Q Consensus 129 ~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~~~~d----~~i~~~~ 192 (224)
.|.....|..+++..|++|.+++|+.|.+..+.+|+.+|+.++.+.++...+-+| .+++|+.
T Consensus 159 --~KrE~~SY~kIa~~iGl~p~eilFLSDn~~EL~AA~~vGl~t~l~~R~g~~P~~d~~~~~~~~sf~ 224 (229)
T COG4229 159 --KKRESQSYAKIAGDIGLPPAEILFLSDNPEELKAAAGVGLATGLAVRPGNAPVPDGQGFLVYKSFE 224 (229)
T ss_pred --ccccchhHHHHHHhcCCCchheEEecCCHHHHHHHHhcchheeeeecCCCCCCCCCcCceeeechh
Confidence 3889999999999999999999999999999999999999999998876544443 3556655
No 106
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.37 E-value=1.6e-06 Score=73.78 Aligned_cols=123 Identities=15% Similarity=0.171 Sum_probs=91.5
Q ss_pred CCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccC
Q 027403 55 LKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 131 (224)
Q Consensus 55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (224)
.+++||+.++++.++ .+++|+|+++...+..+.+.+|+...+......++ +.. -| . ..-....+
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~d-G~l-------tG----~-v~g~~~~~ 142 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDD-GKL-------TG----R-VVGPICDG 142 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeC-CEE-------ec----e-eeeeecCc
Confidence 688999999999997 78999999999999999999999888876655554 110 00 0 00001112
Q ss_pred CCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCCCCCCceEeCC
Q 027403 132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNS 190 (224)
Q Consensus 132 KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~~~~d~~i~~ 190 (224)
+-+.......++++|+++++++.+|||.||+-.-..+|.+.++-+.+.....++..+..
T Consensus 143 ~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~l~~~a~~~~~~ 201 (212)
T COG0560 143 EGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPKLRALADVRIWP 201 (212)
T ss_pred chHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHHHHHHHHHhcCh
Confidence 56788889999999999999999999999999999999986666555433334444333
No 107
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=98.36 E-value=9.8e-06 Score=70.04 Aligned_cols=132 Identities=18% Similarity=0.247 Sum_probs=92.2
Q ss_pred CCCHHHHHHHHhccCCCCCCCCChhHHHHHhcC--C---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCC
Q 027403 36 EFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM--P---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQ 110 (224)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l--~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~ 110 (224)
+.+++++.+.+.. +++.||+.++++.+ + ..++|+|++..-.+...|++.|+.+.|+.|+|....... .
T Consensus 57 gvt~~~I~~~l~~------ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~-~ 129 (234)
T PF06888_consen 57 GVTPEDIRDALRS------IPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDA-D 129 (234)
T ss_pred CCCHHHHHHHHHc------CCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecC-C
Confidence 4677777776654 78999999999999 3 568899999999999999999999999998875321110 0
Q ss_pred CCCCCCCcccccCCccccccCCC---CHHHHHHHHHHh---CCCCCcEEEEeCChhcHHHHHHcCC-eEEEECCCC
Q 027403 111 PADNTDGIENNSFSSNQRILCKP---SLEAIETAIRIA---NVDPKKTIFFDDSARNIASAKAAGL-HTVIVGSSV 179 (224)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~KP---~~~~~~~al~~~---~~~~~~~l~VgDs~~Di~~A~~~G~-~~v~v~~~~ 179 (224)
-++. ...++. |.|..|-| +..+.+..++.. |+..++++||||+.+|+.++.+.+- +.++...++
T Consensus 130 G~l~--v~pyh~---h~C~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~R~~~ 200 (234)
T PF06888_consen 130 GRLR--VRPYHS---HGCSLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFPRKGY 200 (234)
T ss_pred ceEE--EeCccC---CCCCcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEecCCCC
Confidence 0000 001111 22333322 356666666663 6788999999999999999998765 456665554
No 108
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=98.22 E-value=2.3e-06 Score=69.66 Aligned_cols=95 Identities=19% Similarity=0.183 Sum_probs=65.3
Q ss_pred CCCCC-hhHHHHHhcCC---CCeEEEeCCC--------------hHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCC
Q 027403 54 KLKPD-PVLRNLLLSMP---QRKIIFTNAD--------------QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNT 115 (224)
Q Consensus 54 ~~~~~-~g~~~~L~~l~---~~~~I~Tn~~--------------~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~ 115 (224)
.++.+ |++.+.|+.+. ++++|+||.. ...+..+++.+++. +...++...-..
T Consensus 26 D~~~~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip--~~~~~a~~~d~~-------- 95 (159)
T PF08645_consen 26 DWKFFPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIP--IQVYAAPHKDPC-------- 95 (159)
T ss_dssp GGEEC-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS---EEEEECGCSSTT--------
T ss_pred HhhhcchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCc--eEEEecCCCCCC--------
Confidence 35554 47999998885 8899999962 13556677777764 332333333233
Q ss_pred CCcccccCCccccccCCCCHHHHHHHHHHhCC----CCCcEEEEeCC-----------hhcHHHHHHcCCeEE
Q 027403 116 DGIENNSFSSNQRILCKPSLEAIETAIRIANV----DPKKTIFFDDS-----------ARNIASAKAAGLHTV 173 (224)
Q Consensus 116 ~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~----~~~~~l~VgDs-----------~~Di~~A~~~G~~~v 173 (224)
+||.+.+++.+++.++. +.++.+||||. -.|..-|.++|+++.
T Consensus 96 ---------------RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f~ 153 (159)
T PF08645_consen 96 ---------------RKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKFY 153 (159)
T ss_dssp ---------------STTSSHHHHHHCCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--EE
T ss_pred ---------------CCCchhHHHHHHHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCccc
Confidence 49999999999999985 89999999996 468999999999854
No 109
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=98.20 E-value=7.1e-06 Score=67.52 Aligned_cols=94 Identities=17% Similarity=0.256 Sum_probs=71.0
Q ss_pred CCCCCChhHHHHHhcCC---C--CeEEEeCCC-------hHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCccc
Q 027403 53 EKLKPDPVLRNLLLSMP---Q--RKIIFTNAD-------QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIEN 120 (224)
Q Consensus 53 ~~~~~~~g~~~~L~~l~---~--~~~I~Tn~~-------~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~ 120 (224)
..-++.|.+.+.++.++ . +++|+||+. ...+...-+.+|+. .| ... .
T Consensus 56 ~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp-vl----~h~---~------------- 114 (168)
T PF09419_consen 56 YEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP-VL----RHR---A------------- 114 (168)
T ss_pred CcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc-EE----EeC---C-------------
Confidence 34577888999999887 2 488999984 66777777888853 11 111 1
Q ss_pred ccCCccccccCCCCHHHHHHHHHHhCC-----CCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCC
Q 027403 121 NSFSSNQRILCKPSLEAIETAIRIANV-----DPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSV 179 (224)
Q Consensus 121 ~~~~~~~~~~~KP~~~~~~~al~~~~~-----~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~ 179 (224)
.|| ..+..+++.++. +|+++++|||.. .|+..|+.+|+.+||+..|.
T Consensus 115 ----------kKP--~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~gv 167 (168)
T PF09419_consen 115 ----------KKP--GCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDGV 167 (168)
T ss_pred ----------CCC--ccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEEEecCc
Confidence 177 555666666654 499999999998 59999999999999999875
No 110
>PRK10671 copA copper exporting ATPase; Provisional
Probab=98.19 E-value=1e-05 Score=81.29 Aligned_cols=109 Identities=13% Similarity=0.231 Sum_probs=83.2
Q ss_pred CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403 56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 132 (224)
Q Consensus 56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K 132 (224)
++.||+.+.|+.|+ ++++++|+.+...+....+++|+.++|..+ .
T Consensus 650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~~~~~~--------------------------------~ 697 (834)
T PRK10671 650 PLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIAGV--------------------------------L 697 (834)
T ss_pred cchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCEEEeCC--------------------------------C
Confidence 57889999999886 678899999999999999999997655431 2
Q ss_pred CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC----CCCCceEeCCHhHHHHHHH
Q 027403 133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNIKEAIP 199 (224)
Q Consensus 133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~----~~~~d~~i~~~~dl~~~i~ 199 (224)
|. --..++++++.++++++||||+.||+.+++++|+ .+.++.+.. ...+....+++..|.+++.
T Consensus 698 p~--~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agv-gia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~ 765 (834)
T PRK10671 698 PD--GKAEAIKRLQSQGRQVAMVGDGINDAPALAQADV-GIAMGGGSDVAIETAAITLMRHSLMGVADALA 765 (834)
T ss_pred HH--HHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCe-eEEecCCCHHHHHhCCEEEecCCHHHHHHHHH
Confidence 22 1235777777788899999999999999999999 455554433 2334455678888888875
No 111
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=98.19 E-value=8.5e-06 Score=82.43 Aligned_cols=134 Identities=18% Similarity=0.228 Sum_probs=94.0
Q ss_pred CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403 56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 132 (224)
Q Consensus 56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K 132 (224)
++.||++++++.|+ .+++++||.+...+....+.+|+...++.++++.+.... +.-+-.....+...-+.
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~-------~~~~l~~~~~~~~Vfar 600 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAM-------DDQQLSQIVPKVAVFAR 600 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhC-------CHHHHHHHhhcCeEEEE
Confidence 67899999999996 688899999999999999999998877777766554321 00000000001111124
Q ss_pred CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCC---CC--CCCCceEe--CCHhHHHHHHH
Q 027403 133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS---VP--VPPADHAL--NSIHNIKEAIP 199 (224)
Q Consensus 133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~---~~--~~~~d~~i--~~~~dl~~~i~ 199 (224)
+.|+--..+++.++...+.|.||||+.||+.+.+++++ ++..| .. ...+|+++ +++..+...+.
T Consensus 601 ~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdV---Gia~g~~g~~va~~aaDivl~dd~~~~i~~~i~ 671 (884)
T TIGR01522 601 ASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADI---GVAMGQTGTDVAKEAADMILTDDDFATILSAIE 671 (884)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCe---eEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHH
Confidence 55555566667676666889999999999999999995 44443 22 34589998 66999888774
No 112
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.14 E-value=4.4e-06 Score=67.68 Aligned_cols=94 Identities=24% Similarity=0.368 Sum_probs=79.0
Q ss_pred HHHHhcCCCCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHHH
Q 027403 62 RNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETA 141 (224)
Q Consensus 62 ~~~L~~l~~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~a 141 (224)
..+|..+..+++|+|++....+....+.||+.++|.+ .+-+...|+.+
T Consensus 44 ik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~~qG--------------------------------~~dK~~a~~~L 91 (170)
T COG1778 44 IKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHLYQG--------------------------------ISDKLAAFEEL 91 (170)
T ss_pred HHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCceeeec--------------------------------hHhHHHHHHHH
Confidence 4578888899999999999999999999999888865 26688999999
Q ss_pred HHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEe
Q 027403 142 IRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL 188 (224)
Q Consensus 142 l~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i 188 (224)
++++++++++|.||||-.+|+-.-.+.|+. +.+.+.++ ...++|+.
T Consensus 92 ~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls-~a~~dAh~~v~~~a~~Vt 139 (170)
T COG1778 92 LKKLNLDPEEVAYVGDDLVDLPVMEKVGLS-VAVADAHPLLKQRADYVT 139 (170)
T ss_pred HHHhCCCHHHhhhhcCccccHHHHHHcCCc-ccccccCHHHHHhhHhhh
Confidence 999999999999999999999999999997 44544443 33355554
No 113
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.13 E-value=1.5e-05 Score=68.81 Aligned_cols=69 Identities=22% Similarity=0.233 Sum_probs=52.9
Q ss_pred CCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCCHhH--HHHHHHHH
Q 027403 132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEI 201 (224)
Q Consensus 132 KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~~~d--l~~~i~~~ 201 (224)
-.++..+..+++.+|+++++|++|||+.||+..++.+|+ .+.+.++.+ ...+++++.+-.+ +.++|.++
T Consensus 198 ~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~-~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~~~ 270 (272)
T PRK10530 198 NSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGL-GVAMGNADDAVKARADLVIGDNTTPSIAEFIYSH 270 (272)
T ss_pred CChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCc-eEEecCchHHHHHhCCEEEecCCCCcHHHHHHHH
Confidence 457789999999999999999999999999999999997 455555433 3457888765433 55555443
No 114
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=97.92 E-value=3.3e-05 Score=66.55 Aligned_cols=67 Identities=13% Similarity=0.164 Sum_probs=60.1
Q ss_pred HHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHc-------CCeEEEECCCCCCCCCceEeCCHhHHHHHHHHH
Q 027403 135 LEAIETAIRIANVDPKKTIFFDDSARNIASAKAA-------GLHTVIVGSSVPVPPADHALNSIHNIKEAIPEI 201 (224)
Q Consensus 135 ~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~-------G~~~v~v~~~~~~~~~d~~i~~~~dl~~~i~~~ 201 (224)
..++..+++.++.++++++||||+.+|+.+++.+ |..++.|.++.....+++++++..++.+++..+
T Consensus 169 g~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~~~~~A~~~~~~~~~v~~~L~~l 242 (244)
T TIGR00685 169 GEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGSKKTVAKFHLTGPQQVLEFLGLL 242 (244)
T ss_pred HHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCCcCCCceEeCCCHHHHHHHHHHH
Confidence 5899999999999999999999999999999988 778899977766778999999999999888654
No 115
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=97.87 E-value=0.00012 Score=64.55 Aligned_cols=98 Identities=13% Similarity=0.203 Sum_probs=69.1
Q ss_pred CCCCHHHHHHHHhccCCCCCCCCChhHHHHHhcCC---CCeEEEeCCCh---HHHHHHHHHcCCccc-cceeEeeccCCC
Q 027403 35 YEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP---QRKIIFTNADQ---KHAMEVLGRLGLEDC-FEGIICFETINP 107 (224)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~---~~~~~~l~~lgl~~~-fd~ii~~~~~~~ 107 (224)
..++.+.+.+.+.. ....++||+.++|+.++ .+++++||++. ..+...|+.+|+..+ ++.++.-++.
T Consensus 101 ~~~~~~~w~~wv~~----~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~~-- 174 (266)
T TIGR01533 101 KPFDPETWDKWVQA----AQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKDK-- 174 (266)
T ss_pred CcCCHHHHHHHHHc----CCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCCC--
Confidence 34445444444443 34678999999999885 67889999874 456688889999754 4556655431
Q ss_pred CCCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHH
Q 027403 108 RLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAK 166 (224)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~ 166 (224)
++++.-...+.+..++ +++|||..+|+.++.
T Consensus 175 ------------------------~~K~~rr~~I~~~y~I----vl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 175 ------------------------SSKESRRQKVQKDYEI----VLLFGDNLLDFDDFF 205 (266)
T ss_pred ------------------------CCcHHHHHHHHhcCCE----EEEECCCHHHhhhhh
Confidence 5566777777776665 899999999997643
No 116
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=97.80 E-value=9.1e-05 Score=62.42 Aligned_cols=69 Identities=19% Similarity=0.237 Sum_probs=53.6
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCCHhH--HHHHHHH
Q 027403 131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPE 200 (224)
Q Consensus 131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~~~d--l~~~i~~ 200 (224)
+..+...+..+++.+|++++++++|||+.||+..++.+|+. +.+.++.+ ...++++..+-.+ +.+.|..
T Consensus 155 ~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~-vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~~ 227 (230)
T PRK01158 155 GVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFG-VAVANADEELKEAADYVTEKSYGEGVAEAIEH 227 (230)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCce-EEecCccHHHHHhcceEecCCCcChHHHHHHH
Confidence 47789999999999999999999999999999999999995 66766654 3457777654332 4444443
No 117
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=97.72 E-value=0.00012 Score=61.43 Aligned_cols=59 Identities=22% Similarity=0.216 Sum_probs=49.5
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCC
Q 027403 131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNS 190 (224)
Q Consensus 131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~ 190 (224)
+.++...+..+++.+|++++++++|||+.||+..++.+|.. +.+.+..+ ...++++..+
T Consensus 147 ~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~-vam~Na~~~~k~~A~~vt~~ 207 (225)
T TIGR01482 147 GVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFG-VAVANAQPELKEWADYVTES 207 (225)
T ss_pred CCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCce-EEcCChhHHHHHhcCeecCC
Confidence 47888899999999999999999999999999999999995 77776654 4457777644
No 118
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=97.58 E-value=0.00012 Score=68.94 Aligned_cols=126 Identities=17% Similarity=0.140 Sum_probs=70.5
Q ss_pred CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHc---------CCccccceeEeeccCCCCCC-CCCCCCCcc
Q 027403 53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRL---------GLEDCFEGIICFETINPRLQ-PADNTDGIE 119 (224)
Q Consensus 53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~l---------gl~~~fd~ii~~~~~~~~~~-~~~~~~~~~ 119 (224)
..+.+.|.+..+|++|+ .++.++|||+...+...+..+ ...++||-||+...-+..-. .+--+....
T Consensus 180 kYi~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~ 259 (448)
T PF05761_consen 180 KYIHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDT 259 (448)
T ss_dssp CCEE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEET
T ss_pred HHccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEEC
Confidence 34566789999999997 578899999999988888854 23578998887543221100 000000000
Q ss_pred cccCCccc---cccCCC---CHHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHHHc-CCeEEEECCC
Q 027403 120 NNSFSSNQ---RILCKP---SLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAA-GLHTVIVGSS 178 (224)
Q Consensus 120 ~~~~~~~~---~~~~KP---~~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~~~-G~~~v~v~~~ 178 (224)
+.+..... ..+.|. .........+-+|+..++|++|||+. .||..+++. ||+|+.|-..
T Consensus 260 ~~g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~E 326 (448)
T PF05761_consen 260 ETGKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIPE 326 (448)
T ss_dssp TTSSEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-TT
T ss_pred CCCccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEehh
Confidence 00010000 011111 23455677788899999999999998 699888877 9999999554
No 119
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=97.56 E-value=0.00018 Score=61.48 Aligned_cols=133 Identities=15% Similarity=0.180 Sum_probs=85.6
Q ss_pred CCCCHHHHHHHHhccCCCCCCCCChhHHHHHhcCC----CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCC--
Q 027403 35 YEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP----QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPR-- 108 (224)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~----~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~-- 108 (224)
.+.+.+++.+.+.. ++..||+.++++.+. +.++|+|.++.-.+...|+++|+.++|..|.|.-.....
T Consensus 69 qgv~~~~ik~~~r~------iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G 142 (256)
T KOG3120|consen 69 QGVRIAEIKQVLRS------IPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASG 142 (256)
T ss_pred cCCCHHHHHHHHhc------CCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCC
Confidence 45577777776664 788899999998886 468899999999999999999999999988774322110
Q ss_pred CCCCCCCCCcccccCCccccccCCC---CHHHHHHHHH---HhCCCCCcEEEEeCChhcHHHHHHcCC-eEEEECCCCC
Q 027403 109 LQPADNTDGIENNSFSSNQRILCKP---SLEAIETAIR---IANVDPKKTIFFDDSARNIASAKAAGL-HTVIVGSSVP 180 (224)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~KP---~~~~~~~al~---~~~~~~~~~l~VgDs~~Di~~A~~~G~-~~v~v~~~~~ 180 (224)
++.-.. |+. ++.|-++-| +....+.... +-|+..++.+||||+.+|+.+-..... +.+...+|++
T Consensus 143 ~L~v~p-----yH~--~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfp 214 (256)
T KOG3120|consen 143 RLLVRP-----YHT--QHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFP 214 (256)
T ss_pred cEEeec-----CCC--CCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCc
Confidence 000000 110 111111211 1223332222 236777899999999999988776644 4455555544
No 120
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=97.55 E-value=0.00067 Score=53.67 Aligned_cols=116 Identities=15% Similarity=0.153 Sum_probs=88.5
Q ss_pred CCCCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403 53 EKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 130 (224)
Q Consensus 53 ~~~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (224)
..-++++.+.+.++.|. .+++|+|+-....+....+-.|+. .+.+..
T Consensus 27 tgGklf~ev~e~iqeL~d~V~i~IASgDr~gsl~~lae~~gi~--~~rv~a----------------------------- 75 (152)
T COG4087 27 TGGKLFSEVSETIQELHDMVDIYIASGDRKGSLVQLAEFVGIP--VERVFA----------------------------- 75 (152)
T ss_pred cCcEEcHhhHHHHHHHHHhheEEEecCCcchHHHHHHHHcCCc--eeeeec-----------------------------
Confidence 34578888888888887 788899998888888888888864 121111
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC----CCCCceEeCCHhHHHHHHHH
Q 027403 131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNIKEAIPE 200 (224)
Q Consensus 131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~----~~~~d~~i~~~~dl~~~i~~ 200 (224)
-.+++.=..+++.++-+-+.|++|||+.||+.+-+++.+-.+-+.+... ...+|+++.++.++.+++..
T Consensus 76 -~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~~ 148 (152)
T COG4087 76 -GADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLLKD 148 (152)
T ss_pred -ccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHhhc
Confidence 2356666788888887678999999999999999999887666665432 24489999999998887653
No 121
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=97.55 E-value=0.00058 Score=68.07 Aligned_cols=104 Identities=20% Similarity=0.324 Sum_probs=74.5
Q ss_pred CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403 56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 132 (224)
Q Consensus 56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K 132 (224)
++.|++.+.++.|+ .+++++|+.+...+..+.+.+|+..++. . .
T Consensus 568 ~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~~~~------~---------------------------~ 614 (741)
T PRK11033 568 TLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDFRAG------L---------------------------L 614 (741)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCeecC------C---------------------------C
Confidence 68899999999986 7788999999999999999999853221 1 2
Q ss_pred C--CHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEe--CCHhHHHHHH
Q 027403 133 P--SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAI 198 (224)
Q Consensus 133 P--~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i--~~~~dl~~~i 198 (224)
| ++. ++++++ .+..|+||||+.||..+.+.+++. +.++.+.. ...+|+++ +++..|.+++
T Consensus 615 p~~K~~----~v~~l~-~~~~v~mvGDgiNDapAl~~A~vg-ia~g~~~~~a~~~adivl~~~~l~~l~~~i 680 (741)
T PRK11033 615 PEDKVK----AVTELN-QHAPLAMVGDGINDAPAMKAASIG-IAMGSGTDVALETADAALTHNRLRGLAQMI 680 (741)
T ss_pred HHHHHH----HHHHHh-cCCCEEEEECCHHhHHHHHhCCee-EEecCCCHHHHHhCCEEEecCCHHHHHHHH
Confidence 2 222 444454 346899999999999999999953 34444432 23356654 6777777665
No 122
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=97.54 E-value=0.00022 Score=57.92 Aligned_cols=79 Identities=18% Similarity=0.263 Sum_probs=60.8
Q ss_pred CCCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCc-ccc-ceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403 54 KLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLE-DCF-EGIICFETINPRLQPADNTDGIENNSFSSNQRI 129 (224)
Q Consensus 54 ~~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~-~~f-d~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (224)
.+++.||+.++|+.++ ++++|+||+++..+..+++.++.. .+| +.+++.++.... +
T Consensus 56 ~v~~rPgv~efL~~l~~~yel~I~T~~~~~yA~~vl~~ldp~~~~F~~ri~~rd~~~~~-----------------~--- 115 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKLYEMHVYTMGTRAYAQAIAKLIDPDGKYFGDRIISRDESGSP-----------------H--- 115 (156)
T ss_pred EEEECCCHHHHHHHHHhhcEEEEEeCCcHHHHHHHHHHhCcCCCeeccEEEEeccCCCC-----------------c---
Confidence 3678999999999997 789999999999999999999988 488 566776653211 0
Q ss_pred cCCCCHHHHHHHHHHhCCCCCcEEEEeCChh
Q 027403 130 LCKPSLEAIETAIRIANVDPKKTIFFDDSAR 160 (224)
Q Consensus 130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~ 160 (224)
.|- +-+.++.+.+.+++|+|++.
T Consensus 116 -~Kd-------L~~i~~~d~~~vvivDd~~~ 138 (156)
T TIGR02250 116 -TKS-------LLRLFPADESMVVIIDDRED 138 (156)
T ss_pred -ccc-------HHHHcCCCcccEEEEeCCHH
Confidence 121 11345778899999999984
No 123
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=97.47 E-value=0.00036 Score=58.52 Aligned_cols=57 Identities=18% Similarity=0.206 Sum_probs=47.1
Q ss_pred CCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeC
Q 027403 132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALN 189 (224)
Q Consensus 132 KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~ 189 (224)
-.+...+..+++.+|++++++++|||+.||+..++.+|+. +.+.++.+ ...++++..
T Consensus 146 ~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~-vam~na~~~~k~~A~~v~~ 204 (215)
T TIGR01487 146 VDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFK-VAVANADDQLKEIADYVTS 204 (215)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCe-EEcCCccHHHHHhCCEEcC
Confidence 5677899999999999999999999999999999999986 66666543 344677664
No 124
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=97.46 E-value=0.00044 Score=70.44 Aligned_cols=136 Identities=13% Similarity=0.167 Sum_probs=84.3
Q ss_pred CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccc----cceeEeeccCCCCCCCCCCCCCcccccCCcccc
Q 027403 56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDC----FEGIICFETINPRLQPADNTDGIENNSFSSNQR 128 (224)
Q Consensus 56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~----fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (224)
++.+++.+.++.|+ .+++++|+.....+....+.+|+..- ....+++.+.... +.-+-.....+.+
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~-------~~~~~~~~~~~~~ 609 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEM-------GPAKQRAACRSAV 609 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhC-------CHHHHHHhhhcCe
Confidence 57889999999997 78889999998999999999998531 1112222111100 0000000000001
Q ss_pred ccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCC--HhHHHHHHH
Q 027403 129 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNS--IHNIKEAIP 199 (224)
Q Consensus 129 ~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~--~~dl~~~i~ 199 (224)
.-+.-.|.-=..+++.++...+.|.|+||+.||+.+.+.+++. +.++.+.. ...+|+++.+ +..+.+++.
T Consensus 610 v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVG-ia~g~g~~~ak~aAD~vl~dd~f~~i~~~i~ 683 (917)
T TIGR01116 610 LFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIG-IAMGSGTEVAKEASDMVLADDNFATIVAAVE 683 (917)
T ss_pred EEEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCee-EECCCCcHHHHHhcCeEEccCCHHHHHHHHH
Confidence 1112223333455556665567899999999999999999994 55555433 3458999877 888877663
No 125
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=97.44 E-value=0.00076 Score=56.30 Aligned_cols=138 Identities=13% Similarity=0.106 Sum_probs=91.0
Q ss_pred CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccce--eEeeccC-CCCCCCCCCCCCcccccCCcc
Q 027403 53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEG--IICFETI-NPRLQPADNTDGIENNSFSSN 126 (224)
Q Consensus 53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~--ii~~~~~-~~~~~~~~~~~~~~~~~~~~~ 126 (224)
..+++.||.+++.+.++ .+.+|+|++....+..++++++=.+-.+. +++.++. ..--| -.+..-+++
T Consensus 70 k~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~---h~i~~~~ds---- 142 (220)
T COG4359 70 KDIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQ---HSIKYTDDS---- 142 (220)
T ss_pred hhcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCc---eeeecCCcc----
Confidence 34788999999999997 78999999999999999999874333332 2222211 11000 011111222
Q ss_pred ccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCC-----CCCCCCceEeCCHhHHHHHHHHH
Q 027403 127 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS-----VPVPPADHALNSIHNIKEAIPEI 201 (224)
Q Consensus 127 ~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~-----~~~~~~d~~i~~~~dl~~~i~~~ 201 (224)
+....|| ..++.+.-+++.++|+|||..|+.+|+...+- +..+. ..+.-...-+.++.|+..-+.++
T Consensus 143 ~fG~dK~------~vI~~l~e~~e~~fy~GDsvsDlsaaklsDll--FAK~~L~nyc~eqn~~f~~fe~F~eIlk~iekv 214 (220)
T COG4359 143 QFGHDKS------SVIHELSEPNESIFYCGDSVSDLSAAKLSDLL--FAKDDLLNYCREQNLNFLEFETFYEILKEIEKV 214 (220)
T ss_pred ccCCCcc------hhHHHhhcCCceEEEecCCcccccHhhhhhhH--hhHHHHHHHHHHcCCCCcccccHHHHHHHHHHH
Confidence 2333566 35667777788899999999999999987653 22221 11344566788999999988888
Q ss_pred Hhhc
Q 027403 202 WEGE 205 (224)
Q Consensus 202 ~~~~ 205 (224)
++..
T Consensus 215 l~~~ 218 (220)
T COG4359 215 LEVQ 218 (220)
T ss_pred Hhhh
Confidence 8764
No 126
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=97.39 E-value=0.00041 Score=56.36 Aligned_cols=95 Identities=19% Similarity=0.274 Sum_probs=59.1
Q ss_pred hhHHHHHhcC---CCCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCH
Q 027403 59 PVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSL 135 (224)
Q Consensus 59 ~g~~~~L~~l---~~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~ 135 (224)
|++.++|+.+ +.+++|+|+++...+..+++.+|+...+ +++++. ... -.+.......+.. .+ -+.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~--v~~~~~-~~~------~~~~~~~~~~~~~--~~-~K~ 159 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN--VIGNEL-FDN------GGGIFTGRITGSN--CG-GKA 159 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG--EEEEEE-ECT------TCCEEEEEEEEEE--ES-HHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE--EEEEee-eec------ccceeeeeECCCC--CC-cHH
Confidence 6677999776 4889999999999999999999975322 343332 100 0000000001000 00 145
Q ss_pred HHHHHH---HHHhCCCCCcEEEEeCChhcHHHHH
Q 027403 136 EAIETA---IRIANVDPKKTIFFDDSARNIASAK 166 (224)
Q Consensus 136 ~~~~~a---l~~~~~~~~~~l~VgDs~~Di~~A~ 166 (224)
.....+ ... +..+..+++||||.+|+..++
T Consensus 160 ~~l~~~~~~~~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 160 EALKELYIRDEE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHH-THTCCEEEEEESSGGGHHHHH
T ss_pred HHHHHHHHHhhc-CCCCCeEEEEECCHHHHHHhC
Confidence 555555 333 788999999999999998764
No 127
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=97.37 E-value=0.00027 Score=62.94 Aligned_cols=101 Identities=21% Similarity=0.251 Sum_probs=70.2
Q ss_pred ChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCC----cc-cccCCccc--
Q 027403 58 DPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDG----IE-NNSFSSNQ-- 127 (224)
Q Consensus 58 ~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~----~~-~~~~~~~~-- 127 (224)
.||+.++|+.|+ .+++|+||+++.++...++++|+..+|+.|+++++....+..+..-|- ++ ...|.-..
T Consensus 148 dPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~~kp~~e~~d~~~~~~~~~~~f~~d~~~ 227 (301)
T TIGR01684 148 DPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAEEYSTMSTEDRQYRYVFTKTPFYLNTTD 227 (301)
T ss_pred CHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccccCCCCccccccccceEEecCCeEEeCCC
Confidence 499999999997 467899999999999999999999999999999988765432211111 11 11111110
Q ss_pred -cccCCCCHHHHHHHHHHhCCC-CCcEEEEeCCh
Q 027403 128 -RILCKPSLEAIETAIRIANVD-PKKTIFFDDSA 159 (224)
Q Consensus 128 -~~~~KP~~~~~~~al~~~~~~-~~~~l~VgDs~ 159 (224)
.-++| +|......+++.|+. .+.+-.|+|-.
T Consensus 228 ~~~lPK-Sprvvl~yL~~~gvn~~KtitLVDDl~ 260 (301)
T TIGR01684 228 GKRLPK-SPRVVLWYLYDLGVNYFKSITLVDDLA 260 (301)
T ss_pred CCcCCC-CCeehHHHHHHcCCceeeeEEEeccCc
Confidence 01112 477778888888886 46677888876
No 128
>PLN02645 phosphoglycolate phosphatase
Probab=97.28 E-value=0.0008 Score=60.18 Aligned_cols=88 Identities=15% Similarity=0.108 Sum_probs=66.3
Q ss_pred CCCChhHHHHHhcCC---CCeEEEeCCC---hHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccc
Q 027403 55 LKPDPVLRNLLLSMP---QRKIIFTNAD---QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR 128 (224)
Q Consensus 55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~---~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (224)
-.++||+.++|+.|+ ++++++||++ ...+...++.+|+...++.|+++...
T Consensus 43 ~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I~ts~~~----------------------- 99 (311)
T PLN02645 43 DKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIFSSSFA----------------------- 99 (311)
T ss_pred CccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEeehHHH-----------------------
Confidence 368899999999886 7788999988 45555667889987777777766532
Q ss_pred ccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEE
Q 027403 129 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVI 174 (224)
Q Consensus 129 ~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~ 174 (224)
....++..+....+.+||+++..+...+.++|+.++.
T Consensus 100 ---------~~~~l~~~~~~~~~~V~viG~~~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 100 ---------AAAYLKSINFPKDKKVYVIGEEGILEELELAGFQYLG 136 (311)
T ss_pred ---------HHHHHHhhccCCCCEEEEEcCHHHHHHHHHCCCEEec
Confidence 2345555565445568888888999999999998754
No 129
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=97.21 E-value=0.0022 Score=55.16 Aligned_cols=49 Identities=18% Similarity=0.276 Sum_probs=45.0
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCC
Q 027403 131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 179 (224)
Q Consensus 131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~ 179 (224)
+.++..+...+++.+++++++|++|||+.||+..++.++..++.+.++.
T Consensus 165 ~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~ 213 (249)
T TIGR01485 165 GSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQ 213 (249)
T ss_pred CCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCCH
Confidence 4899999999999999999999999999999999999787788887764
No 130
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=97.21 E-value=0.00095 Score=56.17 Aligned_cols=102 Identities=18% Similarity=0.204 Sum_probs=68.3
Q ss_pred CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCcc--ccceeEeeccCCCCCCCCCCCCCcccccCCccc
Q 027403 53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLED--CFEGIICFETINPRLQPADNTDGIENNSFSSNQ 127 (224)
Q Consensus 53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~--~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (224)
....+-||++++..+|+ .+++++|++.+..+..+-+.||+.- .|....-.+..+.+ +-+|.-..-+.+
T Consensus 85 ~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~----~gfd~~~ptsds--- 157 (227)
T KOG1615|consen 85 QKPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKY----LGFDTNEPTSDS--- 157 (227)
T ss_pred CCCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcc----cccccCCccccC---
Confidence 45678899999999997 6788999999999999999999863 44443333332221 111111111111
Q ss_pred cccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHH
Q 027403 128 RILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKA 167 (224)
Q Consensus 128 ~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~ 167 (224)
--++.......+ +.+-+.+.||||+.+|+.+..-
T Consensus 158 ----ggKa~~i~~lrk--~~~~~~~~mvGDGatDlea~~p 191 (227)
T KOG1615|consen 158 ----GGKAEVIALLRK--NYNYKTIVMVGDGATDLEAMPP 191 (227)
T ss_pred ----CccHHHHHHHHh--CCChheeEEecCCccccccCCc
Confidence 224455555544 8888999999999999987655
No 131
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.17 E-value=0.0019 Score=54.18 Aligned_cols=40 Identities=15% Similarity=0.043 Sum_probs=35.9
Q ss_pred CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeE
Q 027403 133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT 172 (224)
Q Consensus 133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~ 172 (224)
.+......+++.+|+++++|++|||+.||+...+.+|...
T Consensus 179 ~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~v 218 (221)
T TIGR02463 179 SKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAV 218 (221)
T ss_pred CHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceE
Confidence 3555789999999999999999999999999999999864
No 132
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=96.98 E-value=0.0025 Score=56.88 Aligned_cols=101 Identities=21% Similarity=0.223 Sum_probs=70.0
Q ss_pred ChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCC----Ccc-cccCCcccc-
Q 027403 58 DPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTD----GIE-NNSFSSNQR- 128 (224)
Q Consensus 58 ~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~- 128 (224)
.|++.++|+.|+ .+++|+||+++.++...++.+|+.++|+.++|+++.......+...| .++ ...|+-..-
T Consensus 150 dp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~~~ 229 (303)
T PHA03398 150 DPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDVTD 229 (303)
T ss_pred ChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCcccccccceeecccceeEEecCceeEeCCc
Confidence 489999999997 56789999999999999999999999999999887654321121111 111 111111000
Q ss_pred --ccCCCCHHHHHHHHHHhCCC-CCcEEEEeCCh
Q 027403 129 --ILCKPSLEAIETAIRIANVD-PKKTIFFDDSA 159 (224)
Q Consensus 129 --~~~KP~~~~~~~al~~~~~~-~~~~l~VgDs~ 159 (224)
-++| +|......+++.|+. .+.+-.|+|-.
T Consensus 230 ~~~lPK-SprvVl~yL~~~gvn~~KtiTLVDDl~ 262 (303)
T PHA03398 230 VKNLPK-SPRVVLWYLRKKGVNYFKTITLVDDLK 262 (303)
T ss_pred ccCCCC-CCeehHHHHHHcCcceeccEEEeccCc
Confidence 1112 578888899999986 46688899886
No 133
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.93 E-value=0.0082 Score=52.34 Aligned_cols=70 Identities=19% Similarity=0.185 Sum_probs=50.7
Q ss_pred CCHHHHHHHHHHhCCCC-CcEEEEeCChhcHHHHHHcCCeEEEECCCCCC-C----CC--ceEe--CC--HhHHHHHHHH
Q 027403 133 PSLEAIETAIRIANVDP-KKTIFFDDSARNIASAKAAGLHTVIVGSSVPV-P----PA--DHAL--NS--IHNIKEAIPE 200 (224)
Q Consensus 133 P~~~~~~~al~~~~~~~-~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~-~----~~--d~~i--~~--~~dl~~~i~~ 200 (224)
.+......+++.+++++ +++++|||+.||+..++.+|.. +.+.++.+. . .. +++. ++ =.-+.+.|..
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~-vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~ 268 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIA-VVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAINK 268 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCee-EEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHHH
Confidence 45668899999999999 9999999999999999999975 666665432 2 22 3544 22 3356666665
Q ss_pred HHh
Q 027403 201 IWE 203 (224)
Q Consensus 201 ~~~ 203 (224)
++.
T Consensus 269 ~~~ 271 (273)
T PRK00192 269 LLS 271 (273)
T ss_pred HHh
Confidence 554
No 134
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=96.92 E-value=0.0013 Score=54.42 Aligned_cols=118 Identities=17% Similarity=0.227 Sum_probs=71.1
Q ss_pred HHHHHHhccCCCCCCCCChhHHHHHhcCCC---CeEEEeCCChH-------HHHHHHHHc-CCccccceeEeeccCCCCC
Q 027403 41 EFHAFVHGKLPYEKLKPDPVLRNLLLSMPQ---RKIIFTNADQK-------HAMEVLGRL-GLEDCFEGIICFETINPRL 109 (224)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~g~~~~L~~l~~---~~~I~Tn~~~~-------~~~~~l~~l-gl~~~fd~ii~~~~~~~~~ 109 (224)
.+...+...--+..++|.||+.++|++|.. ..+++|.++.. .....+++. |. .+++.++.+.+
T Consensus 58 ~~~~~~~~~~~f~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~-i~~~~~~~~~~----- 131 (191)
T PF06941_consen 58 KLWRFYEEPGFFSNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPF-IPYDNLIFTGD----- 131 (191)
T ss_dssp HHHHHHTSTTTTTT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTH-HHHCCEEEESS-----
T ss_pred HHHHHHhChhhhcCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCC-CchheEEEecC-----
Confidence 344444433335678999999999999972 57777776543 334445443 32 12344444322
Q ss_pred CCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCCCCC-CceEe
Q 027403 110 QPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPP-ADHAL 188 (224)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~~~-~d~~i 188 (224)
|- .++. + ++|+|++.++..+...|++.+.+.++..+.. .-..+
T Consensus 132 ----------------------K~----------~v~~--D--vlIDD~~~n~~~~~~~g~~~iLfd~p~Nr~~~~~~Rv 175 (191)
T PF06941_consen 132 ----------------------KT----------LVGG--D--VLIDDRPHNLEQFANAGIPVILFDQPYNRDESNFPRV 175 (191)
T ss_dssp ----------------------GG----------GC----S--EEEESSSHHHSS-SSESSEEEEE--GGGTT--TSEEE
T ss_pred ----------------------CC----------eEec--c--EEecCChHHHHhccCCCceEEEEcCCCCCCCCCCccC
Confidence 31 1122 2 8999999999999999999999998866433 46789
Q ss_pred CCHhHHHHHHHH
Q 027403 189 NSIHNIKEAIPE 200 (224)
Q Consensus 189 ~~~~dl~~~i~~ 200 (224)
+|..|+.+.|..
T Consensus 176 ~~W~ei~~~i~~ 187 (191)
T PF06941_consen 176 NNWEEIEDLILS 187 (191)
T ss_dssp -STTSHHHHHHH
T ss_pred CCHHHHHHHHHh
Confidence 999999988754
No 135
>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]
Probab=96.81 E-value=0.0056 Score=52.72 Aligned_cols=115 Identities=17% Similarity=0.208 Sum_probs=87.0
Q ss_pred CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCC---ccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403 56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGL---EDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 129 (224)
Q Consensus 56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl---~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (224)
..++++.+++++.+ .+++|.|.++......++.+-+- ..++++.+-. .++
T Consensus 123 ~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~~gdl~~y~~gyfDt-~iG----------------------- 178 (254)
T KOG2630|consen 123 HVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSDAGDLRKYISGYFDT-TIG----------------------- 178 (254)
T ss_pred cccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccCcchHHHHhhhhhhc-ccc-----------------------
Confidence 67899999999997 67889999998877777776532 2223222111 222
Q ss_pred cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCCCCC---C---ceEeCCHhHHH
Q 027403 130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPP---A---DHALNSIHNIK 195 (224)
Q Consensus 130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~~~---~---d~~i~~~~dl~ 195 (224)
.|-...+|..+.+..+.++.+++|.-|-++-..+|+++|+.+..+.+|...+- + --++.+|..|.
T Consensus 179 -~K~e~~sy~~I~~~Ig~s~~eiLfLTd~~~Ea~aa~~aGl~a~l~~rPgna~l~dd~~~~y~~i~~F~~l~ 249 (254)
T KOG2630|consen 179 -LKVESQSYKKIGHLIGKSPREILFLTDVPREAAAARKAGLQAGLVSRPGNAPLPDDAKVEYCVIWSFEILE 249 (254)
T ss_pred -ceehhHHHHHHHHHhCCChhheEEeccChHHHHHHHhcccceeeeecCCCCCCCcccccceeeeccchhhh
Confidence 28899999999999999999999999999999999999999999988865211 1 22566776654
No 136
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=96.65 E-value=0.0035 Score=54.13 Aligned_cols=71 Identities=18% Similarity=0.239 Sum_probs=55.8
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCCHh--HHHHHHHHHH
Q 027403 131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIH--NIKEAIPEIW 202 (224)
Q Consensus 131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~~~--dl~~~i~~~~ 202 (224)
+-.+......+++.+|+++++++.|||+.||+..-+.+|. .+.+.++.+ ...++++..+-. -+.+.|..++
T Consensus 194 gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~-~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~~~ 268 (270)
T PRK10513 194 RVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGV-GVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEKYV 268 (270)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCc-eEEecCccHHHHHhcCeeccCCCcchHHHHHHHHh
Confidence 4678899999999999999999999999999999999998 477777654 455788775532 2555555443
No 137
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=96.57 E-value=0.013 Score=58.00 Aligned_cols=108 Identities=14% Similarity=0.182 Sum_probs=74.4
Q ss_pred CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403 56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 132 (224)
Q Consensus 56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K 132 (224)
++.|++++.++.|+ .+++++|+.....+...-+.+|+.++|.. ..
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~v~a~--------------------------------~~ 493 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDDFIAE--------------------------------AT 493 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCEEEcC--------------------------------CC
Confidence 57789999999996 67889999999999999999998654421 13
Q ss_pred CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEe--CCHhHHHHHH
Q 027403 133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAI 198 (224)
Q Consensus 133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i--~~~~dl~~~i 198 (224)
|.. =...++.++-....|.|+||+.||..+-+.++.. +.++.+.. ..-+|+++ +|+..|.+++
T Consensus 494 Ped--K~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvG-iAm~~gt~~akeaadivLldd~~s~Iv~av 560 (675)
T TIGR01497 494 PED--KIALIRQEQAEGKLVAMTGDGTNDAPALAQADVG-VAMNSGTQAAKEAANMVDLDSDPTKLIEVV 560 (675)
T ss_pred HHH--HHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEe-EEeCCCCHHHHHhCCEEECCCCHHHHHHHH
Confidence 331 1122233332345799999999999999999885 55655543 33356654 3455555554
No 138
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=96.56 E-value=0.016 Score=50.82 Aligned_cols=72 Identities=19% Similarity=0.191 Sum_probs=58.9
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHc---CCeEEEECCCCCCCCCceEeCCHhHHHHHHHHHHhh
Q 027403 131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA---GLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEG 204 (224)
Q Consensus 131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~---G~~~v~v~~~~~~~~~d~~i~~~~dl~~~i~~~~~~ 204 (224)
+--+......+++.++++.++++++||+.+|+..-+.+ +-.+|.|+.+ ...+.+.+++..++..++..+...
T Consensus 172 g~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a--~~~A~~~l~~~~~v~~~L~~l~~~ 246 (266)
T PRK10187 172 GTNKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTG--ATQASWRLAGVPDVWSWLEMITTA 246 (266)
T ss_pred CCCHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEECCC--CCcCeEeCCCHHHHHHHHHHHHHh
Confidence 34567888889999999999999999999998777666 4566778655 477999999999999999887743
No 139
>PRK11590 hypothetical protein; Provisional
Probab=96.52 E-value=0.02 Score=48.13 Aligned_cols=100 Identities=11% Similarity=-0.016 Sum_probs=66.3
Q ss_pred CCCChhHHHHH-hcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcc--cccCCcccc
Q 027403 55 LKPDPVLRNLL-LSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIE--NNSFSSNQR 128 (224)
Q Consensus 55 ~~~~~g~~~~L-~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 128 (224)
..++||+.+.| +.++ .+++|+||++...+...+..+|+.. .+.+++++-... +.|-. .+|.+
T Consensus 94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~~~-------~tg~~~g~~c~g---- 161 (211)
T PRK11590 94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQRR-------YGGWVLTLRCLG---- 161 (211)
T ss_pred CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEEEE-------EccEECCccCCC----
Confidence 56799999999 4554 5889999999999999999999633 456666652111 00000 11111
Q ss_pred ccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeE
Q 027403 129 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT 172 (224)
Q Consensus 129 ~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~ 172 (224)
.-+. ..+.+.++.+.+.+.+-|||.+|+.....+|-+.
T Consensus 162 ---~~K~---~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~ 199 (211)
T PRK11590 162 ---HEKV---AQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRW 199 (211)
T ss_pred ---hHHH---HHHHHHhCCCcceEEEecCCcccHHHHHhCCCCE
Confidence 1112 2333334667778899999999999998888763
No 140
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=96.50 E-value=0.02 Score=56.59 Aligned_cols=108 Identities=14% Similarity=0.172 Sum_probs=76.5
Q ss_pred CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403 56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 132 (224)
Q Consensus 56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K 132 (224)
++.|++++.++.|+ .+++++|+-+..-+..+-+.+|+.++|.. .+
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~v~A~--------------------------------~~ 488 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDRFVAE--------------------------------CK 488 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCceEEcC--------------------------------CC
Confidence 57789999999886 67889999999999999999999765432 13
Q ss_pred CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEe--CCHhHHHHHH
Q 027403 133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAI 198 (224)
Q Consensus 133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i--~~~~dl~~~i 198 (224)
| +-=...++.++-.-+.|.|+||+.||.-+-+++.+- +.+++|.. ..-+|.++ +++..|.+.+
T Consensus 489 P--edK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVG-IAMgsGTdvAkeAADiVLldd~ls~Iv~av 555 (673)
T PRK14010 489 P--EDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVG-LAMNSGTMSAKEAANLIDLDSNPTKLMEVV 555 (673)
T ss_pred H--HHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEE-EEeCCCCHHHHHhCCEEEcCCCHHHHHHHH
Confidence 3 222344444444446799999999999999888874 66665543 33456654 4566666655
No 141
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=96.41 E-value=0.0085 Score=50.95 Aligned_cols=49 Identities=16% Similarity=0.108 Sum_probs=43.0
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC
Q 027403 131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP 180 (224)
Q Consensus 131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~ 180 (224)
++++..+...++++++++++++++|||+.||+.....+|.. +.+.+..+
T Consensus 157 ~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~-iav~na~~ 205 (236)
T TIGR02471 157 RASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLG-VVVGNHDP 205 (236)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcE-EEEcCCcH
Confidence 58999999999999999999999999999999999988864 56766543
No 142
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=96.41 E-value=0.015 Score=57.78 Aligned_cols=108 Identities=19% Similarity=0.341 Sum_probs=76.3
Q ss_pred CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403 56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 132 (224)
Q Consensus 56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K 132 (224)
++.|++++.+++|+ .+++++|+-++.-++.+-+.+|+++++.. .+
T Consensus 537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~v~Ae--------------------------------ll 584 (713)
T COG2217 537 ELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDEVRAE--------------------------------LL 584 (713)
T ss_pred CCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHhhecc--------------------------------CC
Confidence 46678888888886 67889999999999999999998766653 14
Q ss_pred CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEe--CCHhHHHHHH
Q 027403 133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAI 198 (224)
Q Consensus 133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i--~~~~dl~~~i 198 (224)
|.... ..+++++-.-..|.||||+.||--+-..+..- +.++.|.. ..-+|.++ +++..+.+.+
T Consensus 585 PedK~--~~V~~l~~~g~~VamVGDGINDAPALA~AdVG-iAmG~GtDvA~eaADvvL~~~dL~~v~~ai 651 (713)
T COG2217 585 PEDKA--EIVRELQAEGRKVAMVGDGINDAPALAAADVG-IAMGSGTDVAIEAADVVLMRDDLSAVPEAI 651 (713)
T ss_pred cHHHH--HHHHHHHhcCCEEEEEeCCchhHHHHhhcCee-EeecCCcHHHHHhCCEEEecCCHHHHHHHH
Confidence 43322 34445544447899999999997776666553 55555543 44467754 4577777766
No 143
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=96.38 E-value=0.005 Score=50.95 Aligned_cols=45 Identities=18% Similarity=0.144 Sum_probs=40.8
Q ss_pred cccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeE
Q 027403 128 RILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT 172 (224)
Q Consensus 128 ~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~ 172 (224)
.+.+.+++...+.++++++++++++++|||+.+|+..++.+|+..
T Consensus 158 ~p~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~v 202 (204)
T TIGR01484 158 LPAGVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAV 202 (204)
T ss_pred ecCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCce
Confidence 344688999999999999999999999999999999999999864
No 144
>PRK10976 putative hydrolase; Provisional
Probab=96.35 E-value=0.007 Score=52.20 Aligned_cols=70 Identities=16% Similarity=0.172 Sum_probs=52.9
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCc--eEeCCHhH--HHHHHHHH
Q 027403 131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPAD--HALNSIHN--IKEAIPEI 201 (224)
Q Consensus 131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d--~~i~~~~d--l~~~i~~~ 201 (224)
+-.+....+.+++.+|+++++++.|||+.||+..-..+|. .+.+.++.+ ...++ ++..+-.+ +...|.++
T Consensus 188 gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~-~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~~~ 263 (266)
T PRK10976 188 GVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGK-GCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLRKL 263 (266)
T ss_pred CCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCC-CeeecCCcHHHHHhCCCCeecccCchHHHHHHHHHH
Confidence 3567889999999999999999999999999999999998 477777754 33344 55544322 55555443
No 145
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=96.12 E-value=0.007 Score=45.40 Aligned_cols=52 Identities=19% Similarity=0.178 Sum_probs=37.9
Q ss_pred CCCCChhHHHHHhcCC---CCeEEEeCCCh---HHHHHHHHHcCCccccceeEeeccC
Q 027403 54 KLKPDPVLRNLLLSMP---QRKIIFTNADQ---KHAMEVLGRLGLEDCFEGIICFETI 105 (224)
Q Consensus 54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~---~~~~~~l~~lgl~~~fd~ii~~~~~ 105 (224)
.-.++||+.++|+.|+ .+++++||++. ......|+.+|+.---+.|+++...
T Consensus 12 g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~ts~~~ 69 (101)
T PF13344_consen 12 GNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIITSGMA 69 (101)
T ss_dssp TTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEEHHHH
T ss_pred CCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEEChHHH
Confidence 4578999999999996 67889999863 5677778999987555677776653
No 146
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=96.07 E-value=0.008 Score=52.16 Aligned_cols=71 Identities=11% Similarity=0.184 Sum_probs=55.7
Q ss_pred CCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCce--EeCCH--hHHHHHHHHHHh
Q 027403 132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADH--ALNSI--HNIKEAIPEIWE 203 (224)
Q Consensus 132 KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~--~i~~~--~dl~~~i~~~~~ 203 (224)
-.+....+.+++.+|+++++++.|||+.||+..-+.+|. .+.+.++.+ ...+++ ++.+- .-+..+|..++.
T Consensus 187 ~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~-~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~~~~~ 263 (272)
T PRK15126 187 CNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGR-GFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLD 263 (272)
T ss_pred CChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCC-ceeccCChHHHHHhCCCCeecCCCcchHHHHHHHHHhc
Confidence 568899999999999999999999999999999999998 577777654 333554 44432 347777777764
No 147
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=95.96 E-value=0.05 Score=53.94 Aligned_cols=108 Identities=12% Similarity=0.210 Sum_probs=75.6
Q ss_pred CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403 56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 132 (224)
Q Consensus 56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K 132 (224)
++.||+++.++.|+ .+++++|+-...-+...-+.+|+.++|.. ..
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~v~A~--------------------------------~~ 492 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFLAE--------------------------------AT 492 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcEEEcc--------------------------------CC
Confidence 46789999998886 68889999999999999999998654321 13
Q ss_pred CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEe--CCHhHHHHHH
Q 027403 133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAI 198 (224)
Q Consensus 133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i--~~~~dl~~~i 198 (224)
|. -=...+++++-.-+-|.|+||+.||.-+-+++..- +.++.|.. ..-+|.++ +|+..|.+.+
T Consensus 493 Pe--dK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVG-IAMgsGTdvAkeAADiVLldd~~s~Iv~av 559 (679)
T PRK01122 493 PE--DKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVG-VAMNSGTQAAKEAGNMVDLDSNPTKLIEVV 559 (679)
T ss_pred HH--HHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEe-EEeCCCCHHHHHhCCEEEeCCCHHHHHHHH
Confidence 32 22233444443346699999999999998888774 56666544 34466664 3466666655
No 148
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=95.92 E-value=0.078 Score=44.82 Aligned_cols=99 Identities=10% Similarity=-0.033 Sum_probs=64.5
Q ss_pred CCCChhHHHHHh-cCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcc---cccCCccc
Q 027403 55 LKPDPVLRNLLL-SMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIE---NNSFSSNQ 127 (224)
Q Consensus 55 ~~~~~g~~~~L~-~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 127 (224)
..++|++.+.|+ .++ .+++|+||++...+..+.+..++.+ .+.+++++-... +|+. .+|.+
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~-~~~~i~t~le~~--------~gg~~~g~~c~g--- 160 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIH-RLNLIASQIERG--------NGGWVLPLRCLG--- 160 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccc-cCcEEEEEeEEe--------CCceEcCccCCC---
Confidence 467999999995 554 6899999999999999998877543 245665541110 1111 11222
Q ss_pred cccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeE
Q 027403 128 RILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT 172 (224)
Q Consensus 128 ~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~ 172 (224)
.-+.. .+.+.++.+.+.+.+-|||.+|+..-..+|-+.
T Consensus 161 ----~~Kv~---rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~ 198 (210)
T TIGR01545 161 ----HEKVA---QLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRW 198 (210)
T ss_pred ----hHHHH---HHHHHhCCChhheEEecCCcccHHHHHhCCCcE
Confidence 11222 233334556677899999999999988888763
No 149
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=95.92 E-value=0.0023 Score=51.09 Aligned_cols=81 Identities=21% Similarity=0.228 Sum_probs=57.2
Q ss_pred CCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCC-ccccceeEeeccCCCCCCCCCCCCCcccccCCccccccC
Q 027403 55 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGL-EDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 131 (224)
Q Consensus 55 ~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl-~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (224)
+...||+.++|+.+. +.++|.|.+.+.++..+++.+.. ..+|+.+++.++.... .
T Consensus 35 v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~ldp~~~~~~~~~~r~~~~~~----------------------~ 92 (159)
T PF03031_consen 35 VKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDALDPNGKLFSRRLYRDDCTFD----------------------K 92 (159)
T ss_dssp EEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHHHTTTTSSEEEEEEGGGSEEE----------------------T
T ss_pred EeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHhhhhhcccccccccccccccc----------------------c
Confidence 456799999999997 89999999999999999999987 5689988877654321 0
Q ss_pred CCCHHHHHHHHHHhCCCCCcEEEEeCChhc
Q 027403 132 KPSLEAIETAIRIANVDPKKTIFFDDSARN 161 (224)
Q Consensus 132 KP~~~~~~~al~~~~~~~~~~l~VgDs~~D 161 (224)
+.. ..-++.++.+.+++++|+|++.-
T Consensus 93 ~~~----~KdL~~l~~~~~~vvivDD~~~~ 118 (159)
T PF03031_consen 93 GSY----IKDLSKLGRDLDNVVIVDDSPRK 118 (159)
T ss_dssp TEE----E--GGGSSS-GGGEEEEES-GGG
T ss_pred ccc----ccchHHHhhccccEEEEeCCHHH
Confidence 101 13445557678999999999874
No 150
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=95.91 E-value=0.0094 Score=51.18 Aligned_cols=59 Identities=22% Similarity=0.244 Sum_probs=46.9
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCC
Q 027403 131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNS 190 (224)
Q Consensus 131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~ 190 (224)
+-.+....+.+++.++++++++++|||+.||+..+..+|+. +.+.++.+ ...++++..+
T Consensus 186 ~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~-~a~~na~~~~k~~a~~~~~~ 246 (256)
T TIGR00099 186 GVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYG-VAMGNADEELKALADYVTDS 246 (256)
T ss_pred CCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCce-eEecCchHHHHHhCCEEecC
Confidence 36688999999999999999999999999999999999986 44444432 3346666554
No 151
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=95.80 E-value=0.029 Score=56.18 Aligned_cols=139 Identities=17% Similarity=0.104 Sum_probs=80.0
Q ss_pred CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403 56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 132 (224)
Q Consensus 56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K 132 (224)
++.|+++++++.|+ .+++++|+-...-+..+-+.+|+.+. ++++++.....+ ....+..+-.....+...-+.
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~---~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~vfAr 517 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTN---IYTADVLLKGDN-RDDLPSGELGEMVEDADGFAE 517 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC---CcCHHHhcCCcc-hhhCCHHHHHHHHHhCCEEEe
Confidence 57789999998887 68889999999999999999998541 233222211000 000000000000000000011
Q ss_pred CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEe--CCHhHHHHHHH
Q 027403 133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAIP 199 (224)
Q Consensus 133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i--~~~~dl~~~i~ 199 (224)
-.|+-=..+.+.++-.-..|.|+||+.||.-+-+++.+- +.+..+.. ..-+|.++ +++..+...+.
T Consensus 518 ~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVG-IAm~~gtdvAkeaADivLl~d~l~~I~~ai~ 587 (755)
T TIGR01647 518 VFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVG-IAVAGATDAARSAADIVLTEPGLSVIVDAIL 587 (755)
T ss_pred cCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCee-EEecCCcHHHHHhCCEEEEcCChHHHHHHHH
Confidence 222222334444444446799999999999999988875 55665543 44477765 45777766663
No 152
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=95.75 E-value=0.027 Score=57.53 Aligned_cols=134 Identities=16% Similarity=0.205 Sum_probs=82.1
Q ss_pred CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403 56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 132 (224)
Q Consensus 56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K 132 (224)
+|.|++++.++.|+ .+++++|+-...-+..+-+.+|+.+ +.++++.+.... +.-+-.....+...-+.
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~--~~v~~G~el~~l-------~~~el~~~~~~~~VfAr 620 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA--GEVLIGSDIETL-------SDDELANLAERTTLFAR 620 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc--cCceeHHHHHhC-------CHHHHHHHHhhCcEEEE
Confidence 56788999988886 6788999999999999999999852 345554433210 00000000000000012
Q ss_pred CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEe--CCHhHHHHHHH
Q 027403 133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAIP 199 (224)
Q Consensus 133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i--~~~~dl~~~i~ 199 (224)
-.|+-=..+.+.++-.-.-|.|+||+.||.-+-+++.+- |.++.+.. ..-+|.++ +|+..+.+.+.
T Consensus 621 ~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVG-IAmg~gtdvAkeaADiVLldd~~~~I~~ai~ 690 (902)
T PRK10517 621 LTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIG-ISVDGAVDIAREAADIILLEKSLMVLEEGVI 690 (902)
T ss_pred cCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEE-EEeCCcCHHHHHhCCEEEecCChHHHHHHHH
Confidence 233333334444443346799999999999999998874 56665543 44578876 56777776664
No 153
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=95.70 E-value=0.029 Score=57.30 Aligned_cols=134 Identities=13% Similarity=0.160 Sum_probs=82.6
Q ss_pred CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403 56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 132 (224)
Q Consensus 56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K 132 (224)
++.|+++++++.|+ .+++++|+-...-+..+-+.+|+.+ +.++++.+.... +.-+-.....+...-+.
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--~~vi~G~el~~~-------~~~el~~~v~~~~VfAr 620 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--GEPLLGTEIEAM-------DDAALAREVEERTVFAK 620 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--CCccchHhhhhC-------CHHHHHHHhhhCCEEEE
Confidence 57789999999987 6888999999999999999999852 234444333210 00000000000000012
Q ss_pred CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEe--CCHhHHHHHHH
Q 027403 133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAIP 199 (224)
Q Consensus 133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i--~~~~dl~~~i~ 199 (224)
-.|+-=..+.+.++-.-.-|.|+||+.||.-+-+++.+- |.++.|.. ..-+|.++ ++|..+.+.+.
T Consensus 621 ~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVG-IAmg~gtdvAkeaADiVLldd~f~~Iv~ai~ 690 (903)
T PRK15122 621 LTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVG-ISVDSGADIAKESADIILLEKSLMVLEEGVI 690 (903)
T ss_pred eCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEE-EEeCcccHHHHHhcCEEEecCChHHHHHHHH
Confidence 233333334444443446799999999999999998875 66665544 45578876 56877777664
No 154
>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=95.70 E-value=0.026 Score=53.18 Aligned_cols=116 Identities=21% Similarity=0.192 Sum_probs=85.8
Q ss_pred CCHHHHHHHHhccCCCCC--CCCChhHHHHHhcCC---CCeEEEeCC--ChHHHHHHHHHcCCccccceeEeeccCCCCC
Q 027403 37 FDNDEFHAFVHGKLPYEK--LKPDPVLRNLLLSMP---QRKIIFTNA--DQKHAMEVLGRLGLEDCFEGIICFETINPRL 109 (224)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~--~~~~~g~~~~L~~l~---~~~~I~Tn~--~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~ 109 (224)
..+..|.+.+.-.+..+. +-|.....++.+.+. .+++++|.- |.+-++..|...|.+..--.+..|.+...
T Consensus 78 ~~p~~f~~~~~lEI~tEKevLypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~g~d~~nipiY~S~e~rl-- 155 (635)
T COG5610 78 NFPLSFQELMKLEINTEKEVLYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSFGPDFNNIPIYMSSEFRL-- 155 (635)
T ss_pred hCcHHHHHHhceeeccceeEeeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhcCCCccCceeeecceeeh--
Confidence 344556655544444443 334444455666663 788899984 67888999999997644445666665544
Q ss_pred CCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChh-cHHHHHHcCCeEEEE
Q 027403 110 QPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSAR-NIASAKAAGLHTVIV 175 (224)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~-Di~~A~~~G~~~v~v 175 (224)
.|.+...|..+++.-+++|.+.++|||..+ |+..+++.|+.|.+.
T Consensus 156 ---------------------~KnSg~LFk~Vlk~EnVd~~~w~H~GDN~~aD~l~pk~LgI~Tlf~ 201 (635)
T COG5610 156 ---------------------KKNSGNLFKAVLKLENVDPKKWIHCGDNWVADYLKPKNLGISTLFY 201 (635)
T ss_pred ---------------------hcccchHHHHHHhhcCCChhheEEecCchhhhhcCccccchhHHHH
Confidence 399999999999999999999999999985 999999999998776
No 155
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=95.67 E-value=0.067 Score=54.45 Aligned_cols=134 Identities=11% Similarity=0.151 Sum_probs=80.3
Q ss_pred CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403 56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 132 (224)
Q Consensus 56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K 132 (224)
++.|++++.++.|+ .+++++|+-...-+..+-+.+|+.. +.++++.+.... +.-+-.....+...-+.
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~--~~v~~g~~l~~~-------~~~el~~~~~~~~vfAr 585 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA--NDFLLGADIEEL-------SDEELARELRKYHIFAR 585 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC--CCeeecHhhhhC-------CHHHHHHHhhhCeEEEE
Confidence 56789999999887 6788999999999999999999852 234444332210 00000000000000011
Q ss_pred CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEe--CCHhHHHHHHH
Q 027403 133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAIP 199 (224)
Q Consensus 133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i--~~~~dl~~~i~ 199 (224)
-.|+-=..+.+.++-.-..|.|+||+.||.-+-+.+.+- +.++.|.. ..-+|.++ +++..+...+.
T Consensus 586 ~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVG-IAmg~gtdvAk~aADiVLldd~~~~I~~ai~ 655 (867)
T TIGR01524 586 LTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVG-ISVDTAADIAKEASDIILLEKSLMVLEEGVI 655 (867)
T ss_pred CCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEE-EEeCCccHHHHHhCCEEEecCChHHHHHHHH
Confidence 122222233333333336799999999999999999885 55665544 44478876 55777766664
No 156
>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=95.66 E-value=0.018 Score=52.55 Aligned_cols=121 Identities=13% Similarity=0.168 Sum_probs=71.5
Q ss_pred CCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHc-C--CccccceeEeeccCCCCCC-C-CCCCCCcccccCCcc
Q 027403 55 LKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRL-G--LEDCFEGIICFETINPRLQ-P-ADNTDGIENNSFSSN 126 (224)
Q Consensus 55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~l-g--l~~~fd~ii~~~~~~~~~~-~-~~~~~~~~~~~~~~~ 126 (224)
+.-.|....+|.+|+ +++.++||+|.+.++.-...+ | ..++||.||.--+-+..-- . |-.-+ +|+++.+.
T Consensus 239 i~r~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~--~dek~~sl 316 (510)
T KOG2470|consen 239 IERNPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRK--YDEKRGSL 316 (510)
T ss_pred hhccHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCCcccccccCcchh--hcccccch
Confidence 445567778888886 789999999999877655433 2 3578998775433221100 0 00000 12222221
Q ss_pred cc---ccCCCC----HHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHH-HcCCeEEEECC
Q 027403 127 QR---ILCKPS----LEAIETAIRIANVDPKKTIFFDDSA-RNIASAK-AAGLHTVIVGS 177 (224)
Q Consensus 127 ~~---~~~KP~----~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~-~~G~~~v~v~~ 177 (224)
.- .+-.|. ..-....++-.++.-.+|+++||++ +|+..-- ++||++-.|-.
T Consensus 317 ~wdkv~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAII~ 376 (510)
T KOG2470|consen 317 LWDKVDKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAIIP 376 (510)
T ss_pred hhhhhhhcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccchH
Confidence 10 000111 1122345666688889999999997 6988776 99999877743
No 157
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=95.52 E-value=0.12 Score=44.71 Aligned_cols=100 Identities=10% Similarity=0.051 Sum_probs=61.9
Q ss_pred CCCCCChhHHHHHhcCC---CCeEEEeCCChHH---HHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcc
Q 027403 53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKH---AMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSN 126 (224)
Q Consensus 53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~---~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (224)
...++.|++.++++.++ .+++++||++... +...|...|+..+ +.++.-.....
T Consensus 117 ~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~-~~LiLR~~~d~------------------- 176 (229)
T TIGR01675 117 GAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW-KHLILRGLEDS------------------- 176 (229)
T ss_pred CCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc-CeeeecCCCCC-------------------
Confidence 44678999999999986 6788999999655 7788888897654 66554321111
Q ss_pred ccccCCCCHHHHHHHHH-HhCC-CCCcEEEEeCChhcHHHHHHcCCeEEEECCC
Q 027403 127 QRILCKPSLEAIETAIR-IANV-DPKKTIFFDDSARNIASAKAAGLHTVIVGSS 178 (224)
Q Consensus 127 ~~~~~KP~~~~~~~al~-~~~~-~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~ 178 (224)
.| +.-.|....+ ++-- .-.=+..|||..+|+.+. -+|.++.-.++|
T Consensus 177 ----~~-~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~G~-~~~~RtFKLPNP 224 (229)
T TIGR01675 177 ----NK-TVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLLGS-PPGRRTFKLPNP 224 (229)
T ss_pred ----Cc-hHhHHHHHHHHHHHhCCceEEEEECCChHHhcCC-CccCceeeCCCC
Confidence 02 2222332222 1110 123368899999999775 445565555443
No 158
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=95.38 E-value=0.08 Score=54.32 Aligned_cols=136 Identities=12% Similarity=0.051 Sum_probs=80.1
Q ss_pred CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403 56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 132 (224)
Q Consensus 56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K 132 (224)
++.|+++++++.|+ .+++++|+-...-+..+-+.+|+.+-=..++++.+.....+.. ....+.. .....| ..
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~e-l~~~i~~--~~Vfar--~s 653 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEE-MDPILPK--LRVLAR--SS 653 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHH-HHHHhcc--CeEEEE--CC
Confidence 56788999998886 6788999999999999999999853222344443322100000 0000000 000011 12
Q ss_pred CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEEC-CCCC--CCCCceEeC--CHhHHHHHHH
Q 027403 133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG-SSVP--VPPADHALN--SIHNIKEAIP 199 (224)
Q Consensus 133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~-~~~~--~~~~d~~i~--~~~dl~~~i~ 199 (224)
|. -=..+.+.++-.-..|.|+||+.||.-+-+++.+- |.++ .|.. ..-+|+++. +|..+..++.
T Consensus 654 Pe--~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVG-IAmg~~gtdvAk~aADivL~dd~f~~I~~~i~ 722 (941)
T TIGR01517 654 PL--DKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVG-FSMGISGTEVAKEASDIILLDDNFASIVRAVK 722 (941)
T ss_pred HH--HHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcc-eecCCCccHHHHHhCCEEEecCCHHHHHHHHH
Confidence 22 22223333332335799999999999999888764 4444 4433 445788876 7888877773
No 159
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=95.31 E-value=0.024 Score=47.15 Aligned_cols=61 Identities=26% Similarity=0.354 Sum_probs=49.5
Q ss_pred CCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCCHhH
Q 027403 132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN 193 (224)
Q Consensus 132 KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~~~d 193 (224)
=.+..+...+++.+|+++++++.|||+.||+.....+|.. +.+.+..+ ...++++..+-.+
T Consensus 185 vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~-~am~na~~~~k~~a~~i~~~~~~ 247 (254)
T PF08282_consen 185 VSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYS-VAMGNATPELKKAADYITPSNND 247 (254)
T ss_dssp SSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEE-EEETTS-HHHHHHSSEEESSGTC
T ss_pred CCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeE-EEEcCCCHHHHHhCCEEecCCCC
Confidence 4577888999999999999999999999999999999885 77776654 4447777766655
No 160
>PLN02887 hydrolase family protein
Probab=95.24 E-value=0.037 Score=53.88 Aligned_cols=57 Identities=18% Similarity=0.186 Sum_probs=46.7
Q ss_pred CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCC
Q 027403 133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNS 190 (224)
Q Consensus 133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~ 190 (224)
.+......+++.+|+++++|+.|||+.||+..-..+|. .|.+.++.+ ...++++..+
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~-gVAMgNA~eeVK~~Ad~VT~s 565 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASL-GVALSNGAEKTKAVADVIGVS 565 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCC-EEEeCCCCHHHHHhCCEEeCC
Confidence 44566778888999999999999999999999999998 477877755 4557887654
No 161
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=95.22 E-value=0.14 Score=44.83 Aligned_cols=86 Identities=19% Similarity=0.205 Sum_probs=56.5
Q ss_pred CCCChhHHHHHhcCC---CCeEEEeCCC---hHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccc
Q 027403 55 LKPDPVLRNLLLSMP---QRKIIFTNAD---QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR 128 (224)
Q Consensus 55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~---~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (224)
-.++||+.++|+.|+ .+++++||++ +......++.+|+..-.+.|+++...
T Consensus 17 ~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~ts~~~----------------------- 73 (279)
T TIGR01452 17 ERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFSSALC----------------------- 73 (279)
T ss_pred CeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEecHHHH-----------------------
Confidence 357889999999886 5788999965 44555678889986445556655432
Q ss_pred ccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEE
Q 027403 129 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTV 173 (224)
Q Consensus 129 ~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v 173 (224)
....+++......+++++|+.. -.......|+..+
T Consensus 74 ---------~~~~l~~~~~~~~~v~~iG~~~-~~~~l~~~g~~~~ 108 (279)
T TIGR01452 74 ---------AARLLRQPPDAPKAVYVIGEEG-LRAELDAAGIRLA 108 (279)
T ss_pred ---------HHHHHHhhCcCCCEEEEEcCHH-HHHHHHHCCCEEe
Confidence 2244555444456799999862 2334456787754
No 162
>COG4996 Predicted phosphatase [General function prediction only]
Probab=95.10 E-value=0.03 Score=44.49 Aligned_cols=82 Identities=20% Similarity=0.274 Sum_probs=58.6
Q ss_pred CCCChhHHHHHhcCCCCeEEEeCCCh---HHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccC
Q 027403 55 LKPDPVLRNLLLSMPQRKIIFTNADQ---KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 131 (224)
Q Consensus 55 ~~~~~g~~~~L~~l~~~~~I~Tn~~~---~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (224)
+.++|.++++|+.++-.+.|+|..+. .-+.+.|..+++..||+-++.
T Consensus 40 v~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~~yFhy~Vi------------------------------ 89 (164)
T COG4996 40 VHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLLQYFHYIVI------------------------------ 89 (164)
T ss_pred EEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchhhhEEEEEe------------------------------
Confidence 56899999999999977776666544 566778888999999997552
Q ss_pred CCCHH---HHHHHHHHhC------CCCCcEEEEeCChhcHHHHH
Q 027403 132 KPSLE---AIETAIRIAN------VDPKKTIFFDDSARNIASAK 166 (224)
Q Consensus 132 KP~~~---~~~~al~~~~------~~~~~~l~VgDs~~Di~~A~ 166 (224)
+|+|. +..++++..+ ++|.+++|++|..-.+.--+
T Consensus 90 ePhP~K~~ML~~llr~i~~er~~~ikP~~Ivy~DDR~iH~~~Iw 133 (164)
T COG4996 90 EPHPYKFLMLSQLLREINTERNQKIKPSEIVYLDDRRIHFGNIW 133 (164)
T ss_pred cCCChhHHHHHHHHHHHHHhhccccCcceEEEEecccccHHHHH
Confidence 44433 3344555543 58999999999875544433
No 163
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=95.09 E-value=0.11 Score=42.28 Aligned_cols=97 Identities=19% Similarity=0.255 Sum_probs=63.3
Q ss_pred CCCCCChhHHHHHhcCC-----CCeEEEeCCCh--------HHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcc
Q 027403 53 EKLKPDPVLRNLLLSMP-----QRKIIFTNADQ--------KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIE 119 (224)
Q Consensus 53 ~~~~~~~g~~~~L~~l~-----~~~~I~Tn~~~--------~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~ 119 (224)
.....+|....-+++++ ..++++||+.- +.+...-...|+. |+- ....
T Consensus 58 ~~~~Iwp~~l~~ie~~~~vygek~i~v~SNsaG~~~~D~d~s~Ak~le~k~gIp-----VlR-Hs~k------------- 118 (190)
T KOG2961|consen 58 YSLAIWPPLLPSIERCKAVYGEKDIAVFSNSAGLTEYDHDDSKAKALEAKIGIP-----VLR-HSVK------------- 118 (190)
T ss_pred cccccCchhHHHHHHHHHHhCcccEEEEecCcCccccCCchHHHHHHHHhhCCc-----eEe-eccc-------------
Confidence 34677888777777776 56889999742 2222222233432 111 1111
Q ss_pred cccCCccccccCCCC--HHHHHHHHHHhC-CCCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCC
Q 027403 120 NNSFSSNQRILCKPS--LEAIETAIRIAN-VDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP 180 (224)
Q Consensus 120 ~~~~~~~~~~~~KP~--~~~~~~al~~~~-~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~ 180 (224)
||. .+.++....... .++++++||||.. .||.-|+.+|--.||+..|..
T Consensus 119 ------------KP~ct~E~~~y~~~Nshv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv~ 171 (190)
T KOG2961|consen 119 ------------KPACTAEEVEYHFGNSHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGVR 171 (190)
T ss_pred ------------CCCccHHHHHHHhCCcccCChhHeEEEccchhhhHhhhhhccceeEEeccccc
Confidence 443 555555443333 4789999999998 599999999999999999875
No 164
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=94.93 E-value=0.15 Score=53.09 Aligned_cols=135 Identities=13% Similarity=0.090 Sum_probs=79.8
Q ss_pred CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccc-c---------ceeEeeccCCCCCCCCCCCCCccccc
Q 027403 56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDC-F---------EGIICFETINPRLQPADNTDGIENNS 122 (224)
Q Consensus 56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~-f---------d~ii~~~~~~~~~~~~~~~~~~~~~~ 122 (224)
++.|+++++++.|+ .+++++|+-...-+..+-+.+|+.+- + ..++++.+...... ........
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~-~~l~~~~~--- 721 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSD-EEVDDLKA--- 721 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCH-HHHHHHhh---
Confidence 57789999999886 78889999999999999999998531 1 12444433221000 00000000
Q ss_pred CCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEEC-CCCC--CCCCceEeC--CHhHHHHH
Q 027403 123 FSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG-SSVP--VPPADHALN--SIHNIKEA 197 (224)
Q Consensus 123 ~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~-~~~~--~~~~d~~i~--~~~dl~~~ 197 (224)
+...-+.-.|+-=..+.+.++-.-..|.|+||+.||.-+-+.+.+- |.++ .|.. ..-+|+++. +|..+...
T Consensus 722 ---~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVG-IAmg~~gt~vak~aADivl~dd~f~~I~~~ 797 (1053)
T TIGR01523 722 ---LCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVG-IAMGINGSDVAKDASDIVLSDDNFASILNA 797 (1053)
T ss_pred ---cCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCcc-EecCCCccHHHHHhcCEEEecCCHHHHHHH
Confidence 0000012222222233333333346799999999999999998875 4444 3333 345788874 47777776
Q ss_pred H
Q 027403 198 I 198 (224)
Q Consensus 198 i 198 (224)
+
T Consensus 798 i 798 (1053)
T TIGR01523 798 I 798 (1053)
T ss_pred H
Confidence 5
No 165
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=94.68 E-value=0.097 Score=52.14 Aligned_cols=67 Identities=16% Similarity=0.100 Sum_probs=51.4
Q ss_pred CCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcC--CeEEEECCCCCCCCCceEeCCHhHHHHHHHHHH
Q 027403 132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAG--LHTVIVGSSVPVPPADHALNSIHNIKEAIPEIW 202 (224)
Q Consensus 132 KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G--~~~v~v~~~~~~~~~d~~i~~~~dl~~~i~~~~ 202 (224)
-.|..+...+++ +.+++.++++||+.+|+..-+.++ ..+|.++. ....++|++++..++.++|..+.
T Consensus 656 vnKG~al~~ll~--~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~--~~s~A~~~l~~~~eV~~~L~~l~ 724 (726)
T PRK14501 656 VNKGRAVRRLLE--AGPYDFVLAIGDDTTDEDMFRALPETAITVKVGP--GESRARYRLPSQREVRELLRRLL 724 (726)
T ss_pred CCHHHHHHHHHh--cCCCCEEEEECCCCChHHHHHhcccCceEEEECC--CCCcceEeCCCHHHHHHHHHHHh
Confidence 345566666666 677899999999999999998874 34455544 46779999999999888887765
No 166
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=94.59 E-value=0.17 Score=44.01 Aligned_cols=71 Identities=11% Similarity=0.040 Sum_probs=52.2
Q ss_pred CCCCHHHHHHHHHHhCC---CCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--------CCCCceEeCCHh--HHHHH
Q 027403 131 CKPSLEAIETAIRIANV---DPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIH--NIKEA 197 (224)
Q Consensus 131 ~KP~~~~~~~al~~~~~---~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--------~~~~d~~i~~~~--dl~~~ 197 (224)
+-.+....+.+++.+|+ ++++++.|||+.||+..-+.+|.. |.+.+... ...++|+.+... .+.+.
T Consensus 185 g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~g-vAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~ 263 (271)
T PRK03669 185 SAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYA-VVVKGLNREGVHLQDDDPARVYRTQREGPEGWREG 263 (271)
T ss_pred CCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEE-EEecCCCCCCcccccccCCceEeccCCCcHHHHHH
Confidence 36678889999999999 999999999999999999999974 66654331 224666655533 45555
Q ss_pred HHHHH
Q 027403 198 IPEIW 202 (224)
Q Consensus 198 i~~~~ 202 (224)
+..++
T Consensus 264 l~~~~ 268 (271)
T PRK03669 264 LDHFF 268 (271)
T ss_pred HHHHH
Confidence 44443
No 167
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=94.07 E-value=0.33 Score=42.43 Aligned_cols=81 Identities=10% Similarity=0.056 Sum_probs=62.4
Q ss_pred eEEEeCCChHHHHHHHHHcCCccccc--eeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCC
Q 027403 72 KIIFTNADQKHAMEVLGRLGLEDCFE--GIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDP 149 (224)
Q Consensus 72 ~~I~Tn~~~~~~~~~l~~lgl~~~fd--~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~ 149 (224)
.+++|++.---....+--+||.++|. .|+++..++ +..-|+.+.+++|-+.
T Consensus 178 NvLVTs~qLVPaLaKcLLy~L~~~f~ieNIYSa~kvG---------------------------K~~cFe~I~~Rfg~p~ 230 (274)
T TIGR01658 178 NVLVTSGQLIPSLAKCLLFRLDTIFRIENVYSSIKVG---------------------------KLQCFKWIKERFGHPK 230 (274)
T ss_pred EEEEEcCccHHHHHHHHHhccCCccccccccchhhcc---------------------------hHHHHHHHHHHhCCCC
Confidence 45777766433333444567878876 477766654 6789999999999877
Q ss_pred CcEEEEeCChhcHHHHHHcCCeEEEECCCC
Q 027403 150 KKTIFFDDSARNIASAKAAGLHTVIVGSSV 179 (224)
Q Consensus 150 ~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~ 179 (224)
-.-+.|||+..--.+|+..+++++-|....
T Consensus 231 ~~f~~IGDG~eEe~aAk~l~wPFw~I~~h~ 260 (274)
T TIGR01658 231 VRFCAIGDGWEECTAAQAMNWPFVKIDLHP 260 (274)
T ss_pred ceEEEeCCChhHHHHHHhcCCCeEEeecCC
Confidence 788999999999999999999999997654
No 168
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=94.02 E-value=1.1 Score=39.12 Aligned_cols=120 Identities=18% Similarity=0.202 Sum_probs=72.0
Q ss_pred CChhHHHHHhcCC---CCeEEEeCCCh---HHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403 57 PDPVLRNLLLSMP---QRKIIFTNADQ---KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 130 (224)
Q Consensus 57 ~~~g~~~~L~~l~---~~~~I~Tn~~~---~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (224)
.-+++.++++.|+ .+++.+|.++. .+..+.|+.+|+. |..-...++....+. ...+.....-++-.|++.
T Consensus 82 ie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~--fs~~~~~~~~~~~~~--~~~~~~~~~~~~~~GIlf 157 (252)
T PF11019_consen 82 IESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGID--FSSSSFPEDGIISFP--VFDSALSRAPSFYDGILF 157 (252)
T ss_pred cchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCC--ccccccccCcceecc--cccCCCCCCceeecCeEE
Confidence 3456777777775 66888998875 5666777788874 332111111000000 000000011111111111
Q ss_pred --CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHH----HHHcCCeEEEECCCCC
Q 027403 131 --CKPSLEAIETAIRIANVDPKKTIFFDDSARNIAS----AKAAGLHTVIVGSSVP 180 (224)
Q Consensus 131 --~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~----A~~~G~~~v~v~~~~~ 180 (224)
+-++..++...+.+.|..|+.++||+|+..++.+ +++.|+.++++.....
T Consensus 158 t~~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt~~ 213 (252)
T PF11019_consen 158 TGGQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYTGA 213 (252)
T ss_pred eCCCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEcch
Confidence 3667799999999999999999999999977654 4556889888876644
No 169
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=94.02 E-value=0.25 Score=51.04 Aligned_cols=138 Identities=11% Similarity=0.098 Sum_probs=77.8
Q ss_pred CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccc------------------------eeEeeccCCCC
Q 027403 56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFE------------------------GIICFETINPR 108 (224)
Q Consensus 56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd------------------------~ii~~~~~~~~ 108 (224)
++.+++++.++.++ .+++++|+.+...+....+.+|+.+--. .++++.+....
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l 647 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDM 647 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhC
Confidence 57789999999986 6788999999999999999999842100 12332222110
Q ss_pred CCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEEC-CCCC--CCCCc
Q 027403 109 LQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG-SSVP--VPPAD 185 (224)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~-~~~~--~~~~d 185 (224)
.. ....... .++ .. +.-+.-.|+-=..+.+.++-...-|.++||+.||+-+-+.+.+- +.++ .|.. ..-+|
T Consensus 648 ~~-~el~~~~-~~~--~~-~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVG-iamg~~G~~vak~aAD 721 (997)
T TIGR01106 648 TS-EQLDEIL-KYH--TE-IVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIG-VAMGIAGSDVSKQAAD 721 (997)
T ss_pred CH-HHHHHHH-Hhc--CC-EEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcc-eecCCcccHHHHHhhc
Confidence 00 0000000 000 00 01112222222233333332335799999999999999988774 4433 2332 34478
Q ss_pred eEeCC--HhHHHHHHH
Q 027403 186 HALNS--IHNIKEAIP 199 (224)
Q Consensus 186 ~~i~~--~~dl~~~i~ 199 (224)
+++.+ |..+.+.+.
T Consensus 722 ivL~dd~f~~Iv~ai~ 737 (997)
T TIGR01106 722 MILLDDNFASIVTGVE 737 (997)
T ss_pred eEEecCCHHHHHHHHH
Confidence 88765 777777663
No 170
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=94.02 E-value=0.075 Score=44.44 Aligned_cols=43 Identities=28% Similarity=0.375 Sum_probs=33.5
Q ss_pred CCCHHHH--HHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCC
Q 027403 132 KPSLEAI--ETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS 178 (224)
Q Consensus 132 KP~~~~~--~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~ 178 (224)
||+|.-| ...++..++. ++-|||-+||.+|+.+|++.+.+.+.
T Consensus 169 k~k~~qy~Kt~~i~~~~~~----IhYGDSD~Di~AAkeaG~RgIRilRA 213 (237)
T COG3700 169 KPKPGQYTKTQWIQDKNIR----IHYGDSDNDITAAKEAGARGIRILRA 213 (237)
T ss_pred CCCcccccccHHHHhcCce----EEecCCchhhhHHHhcCccceeEEec
Confidence 5555544 3466666654 99999999999999999999988654
No 171
>PLN02580 trehalose-phosphatase
Probab=93.81 E-value=0.3 Score=45.26 Aligned_cols=70 Identities=16% Similarity=0.152 Sum_probs=54.9
Q ss_pred CCHHHHHHHHHHhCCCCCc---EEEEeCChhcHHHHHH-----cCCeEEEECCCCCCCCCceEeCCHhHHHHHHHHHHh
Q 027403 133 PSLEAIETAIRIANVDPKK---TIFFDDSARNIASAKA-----AGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWE 203 (224)
Q Consensus 133 P~~~~~~~al~~~~~~~~~---~l~VgDs~~Di~~A~~-----~G~~~v~v~~~~~~~~~d~~i~~~~dl~~~i~~~~~ 203 (224)
-+-.+.+.+++.++++..+ .+||||..+|..+-+. .| ..|.|..+.....+.|.+++..++.++|..+..
T Consensus 301 ~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G-~~I~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~~ 378 (384)
T PLN02580 301 NKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRG-YGILVSSVPKESNAFYSLRDPSEVMEFLKSLVT 378 (384)
T ss_pred CHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCc-eEEEEecCCCCccceEEcCCHHHHHHHHHHHHH
Confidence 4567778888888887553 3899999999888775 24 357777766677899999999999999987654
No 172
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=93.69 E-value=0.17 Score=43.52 Aligned_cols=72 Identities=22% Similarity=0.275 Sum_probs=52.4
Q ss_pred cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEe--CCHhHHHHHHHHHH
Q 027403 130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAIPEIW 202 (224)
Q Consensus 130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i--~~~~dl~~~i~~~~ 202 (224)
.+-.+......+++.+|+++++++.|||+.||+..-..+|.. |.+.+..+ ...++++. ++=.-+.+.|..++
T Consensus 186 ~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~g-vam~Na~~~~k~~A~~vt~~n~~~Gv~~~l~~~~ 261 (264)
T COG0561 186 KGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLG-VAMGNADEELKELADYVTTSNDEDGVAEALEKLL 261 (264)
T ss_pred CCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCee-eeccCCCHHHHhhCCcccCCccchHHHHHHHHHh
Confidence 356678899999999999999999999999999999988885 66766643 33345432 23344555555443
No 173
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=93.44 E-value=0.14 Score=44.08 Aligned_cols=48 Identities=17% Similarity=0.131 Sum_probs=41.6
Q ss_pred CCCCHHHHHHHHHHhCCC--CCcEEEEeCChhcHHHHHHcCCeEEEECCCC
Q 027403 131 CKPSLEAIETAIRIANVD--PKKTIFFDDSARNIASAKAAGLHTVIVGSSV 179 (224)
Q Consensus 131 ~KP~~~~~~~al~~~~~~--~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~ 179 (224)
+-.+......+++.++++ ++++++|||+.||+...+.+|.. +.+.+..
T Consensus 174 ~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~-vam~Na~ 223 (256)
T TIGR01486 174 GSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLA-VVVPGPN 223 (256)
T ss_pred CCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEE-EEeCCCC
Confidence 366788899999999999 99999999999999999999986 6666654
No 174
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=92.59 E-value=0.95 Score=40.13 Aligned_cols=102 Identities=10% Similarity=0.076 Sum_probs=62.1
Q ss_pred CCCCCChhHHHHHhcCC---CCeEEEeCCCh---HHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcc
Q 027403 53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQ---KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSN 126 (224)
Q Consensus 53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~---~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (224)
...++.|++.++++.++ .+++++||++. +.....|...|+.. ++.++.-.....+
T Consensus 142 ~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~-~~~LiLR~~~D~~------------------ 202 (275)
T TIGR01680 142 GEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHT-WEKLILKDPQDNS------------------ 202 (275)
T ss_pred ccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCC-cceeeecCCCCCc------------------
Confidence 35678899999998886 67889999985 45667777778754 3655543221111
Q ss_pred ccccCCCCHHHHHHHHHHhCC--CCCcEEEEeCChhcHHHHHHcCCeEEEECCC
Q 027403 127 QRILCKPSLEAIETAIRIANV--DPKKTIFFDDSARNIASAKAAGLHTVIVGSS 178 (224)
Q Consensus 127 ~~~~~KP~~~~~~~al~~~~~--~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~ 178 (224)
+.+.-.|+...++--+ .-.=+..|||..+|+.+....+-++.-.++|
T Consensus 203 -----~~~av~yKs~~R~~li~eGYrIv~~iGDq~sDl~G~~~g~~RtFKLPNP 251 (275)
T TIGR01680 203 -----AENAVEYKTAARAKLIQEGYNIVGIIGDQWNDLKGEHRGAIRSFKLPNP 251 (275)
T ss_pred -----cchhHHHHHHHHHHHHHcCceEEEEECCCHHhccCCCccCcceecCCCc
Confidence 3333334333222111 1233688999999997765333566666555
No 175
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=92.52 E-value=0.63 Score=40.67 Aligned_cols=96 Identities=19% Similarity=0.261 Sum_probs=62.6
Q ss_pred cCCCCHHHHHHHHhccCCCCCCCCChhHHHHHhcCC---CCeEEEeCCChHH----HHHHHHHcCCccccce-eEeeccC
Q 027403 34 GYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP---QRKIIFTNADQKH----AMEVLGRLGLEDCFEG-IICFETI 105 (224)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~----~~~~l~~lgl~~~fd~-ii~~~~~ 105 (224)
+.+++++....++.. ...++.||+.++|.... ..+.-+||+.++. ...-|.++|+...-+. ++.-.+
T Consensus 104 nk~f~pe~Wd~wV~a----~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~~llkk~- 178 (274)
T COG2503 104 NKGFTPETWDKWVQA----KKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESHLLLKKD- 178 (274)
T ss_pred CCCCCccchHHHHhh----cccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccceEEeeC-
Confidence 455666666665554 45689999999999997 5677999988754 6677788887654432 222211
Q ss_pred CCCCCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHH
Q 027403 106 NPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIA 163 (224)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~ 163 (224)
.||+..=+..+.+ +-+=|++|||...|..
T Consensus 179 -------------------------~k~Ke~R~~~v~k----~~~iVm~vGDNl~DF~ 207 (274)
T COG2503 179 -------------------------KKSKEVRRQAVEK----DYKIVMLVGDNLDDFG 207 (274)
T ss_pred -------------------------CCcHHHHHHHHhh----ccceeeEecCchhhhc
Confidence 1444444444444 4456899999987654
No 176
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=92.50 E-value=0.94 Score=46.09 Aligned_cols=103 Identities=18% Similarity=0.275 Sum_probs=64.7
Q ss_pred HHHHHhcCCCCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHH
Q 027403 61 LRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIET 140 (224)
Q Consensus 61 ~~~~L~~l~~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~ 140 (224)
+...|+++..+++++|+-.+..++.+-+++| ++.|++ +- +|.... .
T Consensus 731 av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VG----i~~V~a-ev---------------------------~P~~K~--~ 776 (951)
T KOG0207|consen 731 AVAELKSMGIKVVMLTGDNDAAARSVAQQVG----IDNVYA-EV---------------------------LPEQKA--E 776 (951)
T ss_pred HHHHHHhcCceEEEEcCCCHHHHHHHHHhhC----cceEEe-cc---------------------------CchhhH--H
Confidence 3445566668999999999999999999999 444332 21 443321 3
Q ss_pred HHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceE--eCCHhHHHHHH
Q 027403 141 AIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHA--LNSIHNIKEAI 198 (224)
Q Consensus 141 al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~--i~~~~dl~~~i 198 (224)
.+++++.....+.||||+.||--+-..+.+- +.+..|.. ..-+|++ -+++.++...+
T Consensus 777 ~Ik~lq~~~~~VaMVGDGINDaPALA~AdVG-Iaig~gs~vAieaADIVLmrn~L~~v~~ai 837 (951)
T KOG0207|consen 777 KIKEIQKNGGPVAMVGDGINDAPALAQADVG-IAIGAGSDVAIEAADIVLMRNDLRDVPFAI 837 (951)
T ss_pred HHHHHHhcCCcEEEEeCCCCccHHHHhhccc-eeeccccHHHHhhCCEEEEccchhhhHHHH
Confidence 3445554557799999999985544444332 33444432 3345664 46677776655
No 177
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=92.18 E-value=0.63 Score=47.45 Aligned_cols=72 Identities=11% Similarity=0.073 Sum_probs=54.4
Q ss_pred CCCHHHHHHHHHH---hCCCCCcEEEEeCChhcHHHHHHcC-------------CeEEEECCCCCCCCCceEeCCHhHHH
Q 027403 132 KPSLEAIETAIRI---ANVDPKKTIFFDDSARNIASAKAAG-------------LHTVIVGSSVPVPPADHALNSIHNIK 195 (224)
Q Consensus 132 KP~~~~~~~al~~---~~~~~~~~l~VgDs~~Di~~A~~~G-------------~~~v~v~~~~~~~~~d~~i~~~~dl~ 195 (224)
-.|..+.+.+++. .|..++.+++|||..+|...-+.++ ..+|.|+. ....|.|.+++..++.
T Consensus 761 vnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG~--~~S~A~y~L~d~~eV~ 838 (854)
T PLN02205 761 VSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQ--KPSKAKYYLDDTAEIV 838 (854)
T ss_pred CCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEECC--CCccCeEecCCHHHHH
Confidence 3455666666643 5888999999999999988777665 34556654 4577999999999999
Q ss_pred HHHHHHHhhc
Q 027403 196 EAIPEIWEGE 205 (224)
Q Consensus 196 ~~i~~~~~~~ 205 (224)
+++..+....
T Consensus 839 ~lL~~L~~~~ 848 (854)
T PLN02205 839 RLMQGLASVS 848 (854)
T ss_pred HHHHHHHhcc
Confidence 9998877543
No 178
>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]
Probab=92.06 E-value=1.3 Score=41.02 Aligned_cols=79 Identities=16% Similarity=0.135 Sum_probs=59.2
Q ss_pred eEEEeCCChHHHHHHHHHcCCccccc--eeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCC
Q 027403 72 KIIFTNADQKHAMEVLGRLGLEDCFE--GIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDP 149 (224)
Q Consensus 72 ~~I~Tn~~~~~~~~~l~~lgl~~~fd--~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~ 149 (224)
.+++|+..---....+--+||...|. .|.++..++ +..-|+.+.+++|- .
T Consensus 373 nVlvTttqLipalaKvLL~gLg~~fpiENIYSa~kiG---------------------------KescFerI~~RFg~-K 424 (468)
T KOG3107|consen 373 NVLVTTTQLIPALAKVLLYGLGSSFPIENIYSATKIG---------------------------KESCFERIQSRFGR-K 424 (468)
T ss_pred EEEEeccchhHHHHHHHHHhcCCcccchhhhhhhhcc---------------------------HHHHHHHHHHHhCC-c
Confidence 56888876543444444567766665 477777665 56789999999996 4
Q ss_pred CcEEEEeCChhcHHHHHHcCCeEEEECCC
Q 027403 150 KKTIFFDDSARNIASAKAAGLHTVIVGSS 178 (224)
Q Consensus 150 ~~~l~VgDs~~Di~~A~~~G~~~v~v~~~ 178 (224)
-.-++|||+..--.+|++.+|++.-|...
T Consensus 425 ~~yvvIgdG~eee~aAK~ln~PfwrI~~h 453 (468)
T KOG3107|consen 425 VVYVVIGDGVEEEQAAKALNMPFWRISSH 453 (468)
T ss_pred eEEEEecCcHHHHHHHHhhCCceEeeccC
Confidence 55678999999999999999998888654
No 179
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=91.62 E-value=0.29 Score=41.68 Aligned_cols=39 Identities=13% Similarity=0.167 Sum_probs=31.0
Q ss_pred CHHHHHHHHHHhCC--CCCcEEEEeCChhcHHHHHHcCCeE
Q 027403 134 SLEAIETAIRIANV--DPKKTIFFDDSARNIASAKAAGLHT 172 (224)
Q Consensus 134 ~~~~~~~al~~~~~--~~~~~l~VgDs~~Di~~A~~~G~~~ 172 (224)
+.......++.+++ ++.+|++|||+.||+.....+|+..
T Consensus 182 K~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v 222 (225)
T TIGR02461 182 KGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAF 222 (225)
T ss_pred HHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcE
Confidence 45555666666654 7779999999999999999999864
No 180
>PLN02382 probable sucrose-phosphatase
Probab=91.16 E-value=0.4 Score=44.80 Aligned_cols=49 Identities=14% Similarity=0.158 Sum_probs=42.6
Q ss_pred CCCHHHHHHHHHHh---CCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC
Q 027403 132 KPSLEAIETAIRIA---NVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP 180 (224)
Q Consensus 132 KP~~~~~~~al~~~---~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~ 180 (224)
--+..+...+++.+ |+++++++.+||+.||+..-..+|...|.+.++.+
T Consensus 174 ~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~ 225 (413)
T PLN02382 174 AGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQE 225 (413)
T ss_pred CCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcH
Confidence 45788889999999 99999999999999999999999976788877643
No 181
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=90.94 E-value=1 Score=40.23 Aligned_cols=103 Identities=22% Similarity=0.246 Sum_probs=68.8
Q ss_pred CCChhHHHHHhcCCC---CeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCC----Ccc-cccCCccc
Q 027403 56 KPDPVLRNLLLSMPQ---RKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTD----GIE-NNSFSSNQ 127 (224)
Q Consensus 56 ~~~~g~~~~L~~l~~---~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~----~~~-~~~~~~~~ 127 (224)
.+.|.+.+.|..|+. -+++=|-+.++++...++.+++.++||.|+|.+........+...| .++ ...|+-..
T Consensus 142 Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd~ii~~G~~~~~~~~~~~~d~~~~~~f~~~~FylDv 221 (297)
T PF05152_consen 142 IRDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELKLEGYFDIIICGGNKAGEYNSRVIVDRQYKVIFVSKPFYLDV 221 (297)
T ss_pred cCChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhCCccccEEEEeCCccCCcCCccceeecccceEEeccceEEeC
Confidence 367899999999983 3568899999999999999999999999999765443211121111 111 01111000
Q ss_pred cc---cCCCCHHHHHHHHHHhCCC-CCcEEEEeCCh
Q 027403 128 RI---LCKPSLEAIETAIRIANVD-PKKTIFFDDSA 159 (224)
Q Consensus 128 ~~---~~KP~~~~~~~al~~~~~~-~~~~l~VgDs~ 159 (224)
-. ++| +|......+++.|+. .+.+-.|+|-.
T Consensus 222 ~~~~~LPK-SPrVVL~yL~k~gvny~KtiTLVDDL~ 256 (297)
T PF05152_consen 222 TNVNNLPK-SPRVVLWYLRKKGVNYFKTITLVDDLK 256 (297)
T ss_pred CcCCCCCC-CCeehHHHHHHcCCceeeeEEEeccCc
Confidence 00 122 578888899999986 46678888886
No 182
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=90.94 E-value=0.39 Score=41.51 Aligned_cols=48 Identities=19% Similarity=0.293 Sum_probs=37.8
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCC
Q 027403 131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 179 (224)
Q Consensus 131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~ 179 (224)
+--+..+...+++++++++++++.+|||.||+..- ..+...|.|.+..
T Consensus 163 ~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~Na~ 210 (247)
T PF05116_consen 163 GASKGAALRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGNAQ 210 (247)
T ss_dssp T-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TTS-
T ss_pred CCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcCCC
Confidence 35578899999999999999999999999999766 7788889887754
No 183
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=90.27 E-value=0.95 Score=46.52 Aligned_cols=136 Identities=15% Similarity=0.154 Sum_probs=79.2
Q ss_pred CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccc--eeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403 56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFE--GIICFETINPRLQPADNTDGIENNSFSSNQRIL 130 (224)
Q Consensus 56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd--~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (224)
+|-++++++++.|+ .++.++|+-...-+..+-+.+|+..--+ -++++.+....... .-.+.+..-+ .-
T Consensus 547 ppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~-el~~~~~~~~------Vf 619 (917)
T COG0474 547 PPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDE-ELAELVEELS------VF 619 (917)
T ss_pred CCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHH-HHHHHhhhCc------EE
Confidence 57788999888886 7899999999999999999999864432 25555543321000 0000000000 11
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceE--eCCHhHHHHHH
Q 027403 131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHA--LNSIHNIKEAI 198 (224)
Q Consensus 131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~--i~~~~dl~~~i 198 (224)
+.=+|+-=..+.+.++-.-.-|.|+||+.||.-+-++|.+-......|.+ ..-+|.+ -+++.-+...+
T Consensus 620 ARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av 691 (917)
T COG0474 620 ARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAV 691 (917)
T ss_pred EEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHH
Confidence 12233333333333333347799999999999999999886433334433 2335554 33455555444
No 184
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=90.22 E-value=1.8 Score=41.10 Aligned_cols=102 Identities=17% Similarity=0.257 Sum_probs=66.5
Q ss_pred CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403 56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 132 (224)
Q Consensus 56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K 132 (224)
++.+++.+.++.|+ .+++++|+.+...+...-+.+|+ + ++ . .
T Consensus 347 ~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi---~-----~~-~--------------------------~ 391 (499)
T TIGR01494 347 PLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI---F-----AR-V--------------------------T 391 (499)
T ss_pred CCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc---e-----ec-c--------------------------C
Confidence 56677888777775 67889999999999999999886 1 11 1 2
Q ss_pred CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCCCCCCceEeCC--HhHHHHHH
Q 027403 133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNS--IHNIKEAI 198 (224)
Q Consensus 133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~~~~d~~i~~--~~dl~~~i 198 (224)
|. --...++.+.-....+.||||+.||..+-+.++.- +.+. ...-+|.++.+ +..+..++
T Consensus 392 p~--~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advg-ia~~---a~~~adivl~~~~l~~i~~~~ 453 (499)
T TIGR01494 392 PE--EKAALVEALQKKGRVVAMTGDGVNDAPALKKADVG-IAMG---AKAAADIVLLDDNLSTIVDAL 453 (499)
T ss_pred HH--HHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCc-cccc---hHHhCCeEEecCCHHHHHHHH
Confidence 22 22234444433336799999999999888888754 3333 23347777654 44444433
No 185
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=89.88 E-value=0.38 Score=39.82 Aligned_cols=135 Identities=19% Similarity=0.242 Sum_probs=84.7
Q ss_pred CCCHHHHHHHHhccC--CCCCCCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCc-cccceeEeeccCCCCCC
Q 027403 36 EFDNDEFHAFVHGKL--PYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLE-DCFEGIICFETINPRLQ 110 (224)
Q Consensus 36 ~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~-~~fd~ii~~~~~~~~~~ 110 (224)
.++-++|++++.... -+.....-.++...|..++ .+++-+|...+...+.--..+... -.+|.+--.+
T Consensus 50 ~i~~ee~~k~~e~~ea~l~ke~l~~q~v~~~L~~~~e~~~L~~itar~~dl~~iT~~~l~~q~ih~~~l~i~g------- 122 (194)
T COG5663 50 NITTEEFWKWMEQTEAWLYKEALLAQLVKQVLPSLKEEHRLIYITARKADLTRITYAWLFIQNIHYDHLEIVG------- 122 (194)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhceeeeeehhhHHHHHHHHHHHHHhccchhhhhhhc-------
Confidence 456677777655321 1122445567777888887 778888887766554443333222 2344422111
Q ss_pred CCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCCCCCC---ce
Q 027403 111 PADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVPVPPA---DH 186 (224)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~~~~~---d~ 186 (224)
+..+ -.+.+..+++ +|+.|+. +-.+.|+++|++.+.+.++..+.++ -.
T Consensus 123 ---------------------~h~K---V~~vrth~id----lf~ed~~~na~~iAk~~~~~vilins~ynRkp~~~nii 174 (194)
T COG5663 123 ---------------------LHHK---VEAVRTHNID----LFFEDSHDNAGQIAKNAGIPVILINSPYNRKPAAKNII 174 (194)
T ss_pred ---------------------cccc---chhhHhhccC----ccccccCchHHHHHHhcCCcEEEecCcccccchHHHHH
Confidence 1111 2567778887 8999997 6788899999999999998765443 33
Q ss_pred EeCCHhHHHHHHHHHHhhc
Q 027403 187 ALNSIHNIKEAIPEIWEGE 205 (224)
Q Consensus 187 ~i~~~~dl~~~i~~~~~~~ 205 (224)
.+++..+..+.+...++.+
T Consensus 175 R~~~w~e~y~~vd~~~kR~ 193 (194)
T COG5663 175 RANNWAEAYEWVDSRLKRS 193 (194)
T ss_pred HHHhHHHHHHHHHHHhccC
Confidence 5677777777777666543
No 186
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=89.74 E-value=3.3 Score=43.28 Aligned_cols=38 Identities=16% Similarity=0.293 Sum_probs=32.7
Q ss_pred CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCc
Q 027403 56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLE 93 (224)
Q Consensus 56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~ 93 (224)
++.|++.+.++.|+ .+++++|+-+..-+..+-+.+|+-
T Consensus 656 ~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii 696 (1054)
T TIGR01657 656 PLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIV 696 (1054)
T ss_pred CCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence 46778888888886 788999999999899999999984
No 187
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=88.91 E-value=0.16 Score=43.61 Aligned_cols=92 Identities=13% Similarity=0.107 Sum_probs=55.9
Q ss_pred CCCChhHHHHHhcCC---CCeEEEeCCCh---HHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccc
Q 027403 55 LKPDPVLRNLLLSMP---QRKIIFTNADQ---KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR 128 (224)
Q Consensus 55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~---~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (224)
-++.|++.++++.+. .+++++||++. ......|...|+.. ++.++....-... .
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~-~~~l~lr~~~~~~------------~------- 173 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPG-WDHLILRPDKDPS------------K------- 173 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTST-BSCGEEEEESSTS------------S-------
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCc-cchhccccccccc------------c-------
Confidence 378888999998886 67889999764 57777888889653 3554433221110 0
Q ss_pred ccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHc
Q 027403 129 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA 168 (224)
Q Consensus 129 ~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~ 168 (224)
......+..-...+++-|. +=+++|||..+|+.+++..
T Consensus 174 ~~~~~yK~~~r~~i~~~Gy--~Ii~~iGD~~~D~~~~~~~ 211 (229)
T PF03767_consen 174 KSAVEYKSERRKEIEKKGY--RIIANIGDQLSDFSGAKTA 211 (229)
T ss_dssp ------SHHHHHHHHHTTE--EEEEEEESSGGGCHCTHHH
T ss_pred ccccccchHHHHHHHHcCC--cEEEEeCCCHHHhhccccc
Confidence 0012223333344444442 2289999999999995444
No 188
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=88.71 E-value=1.5 Score=36.91 Aligned_cols=39 Identities=21% Similarity=0.192 Sum_probs=34.6
Q ss_pred CCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCc
Q 027403 55 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLE 93 (224)
Q Consensus 55 ~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~ 93 (224)
...-|++.++|+.+. +.++|.|.+...++..+++.+|+.
T Consensus 44 ~~kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~l~~~ 84 (195)
T TIGR02245 44 ELMRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTELGVL 84 (195)
T ss_pred EEeCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHHhccc
Confidence 346689999999996 899999999999999999998864
No 189
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=87.53 E-value=1.4 Score=46.02 Aligned_cols=49 Identities=18% Similarity=0.274 Sum_probs=36.7
Q ss_pred CCcEEEEeCChhcHHHHHHcCCeEEEECCCC--C-CCCCceEeCCHhHHHHHH
Q 027403 149 PKKTIFFDDSARNIASAKAAGLHTVIVGSSV--P-VPPADHALNSIHNIKEAI 198 (224)
Q Consensus 149 ~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~--~-~~~~d~~i~~~~dl~~~i 198 (224)
..-|+++||+.||+.+-++|.+- |++.... . ..-+|+++.++..|..++
T Consensus 768 ~~~vl~iGDG~ND~~mlk~AdVG-Igi~g~eg~qA~~aaD~~i~~F~~L~~ll 819 (1057)
T TIGR01652 768 GKTTLAIGDGANDVSMIQEADVG-VGISGKEGMQAVMASDFAIGQFRFLTKLL 819 (1057)
T ss_pred CCeEEEEeCCCccHHHHhhcCee-eEecChHHHHHHHhhhhhhhhHHHHHHHH
Confidence 36799999999999999988775 3543221 1 334899999988888776
No 190
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=87.29 E-value=5.7 Score=31.91 Aligned_cols=102 Identities=13% Similarity=0.108 Sum_probs=58.2
Q ss_pred CCChhHHHHHhcCC---CCeEEEeCCChHHH---HHHHHHc---CCcccc-ceeEeeccCCCCCCCCCCCCCcccccCCc
Q 027403 56 KPDPVLRNLLLSMP---QRKIIFTNADQKHA---MEVLGRL---GLEDCF-EGIICFETINPRLQPADNTDGIENNSFSS 125 (224)
Q Consensus 56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~---~~~l~~l---gl~~~f-d~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (224)
...|++.+++++++ ++++++|+++...+ +..++.+ |. +.. ..++++...... + ..
T Consensus 27 ~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~-~lp~g~li~~~g~~~~-------~-------~~ 91 (157)
T smart00775 27 WTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGH-NLPHGPVLLSPDRLFA-------A-------LH 91 (157)
T ss_pred cCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccc-cCCCceEEEcCCcchh-------h-------hh
Confidence 45789999999886 78889999998766 4666662 32 122 345655432110 0 00
Q ss_pred cccccCCC---CHHHHHHHHHHhCCCCCcE-EEEeCChhcHHHHHHcCCeE
Q 027403 126 NQRILCKP---SLEAIETAIRIANVDPKKT-IFFDDSARNIASAKAAGLHT 172 (224)
Q Consensus 126 ~~~~~~KP---~~~~~~~al~~~~~~~~~~-l~VgDs~~Di~~A~~~G~~~ 172 (224)
+.....+| +.+....+.+.+.-..-.. .-+||+..|+.+=.++|++.
T Consensus 92 ~e~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~~ 142 (157)
T smart00775 92 REVISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIPP 142 (157)
T ss_pred cccccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCCh
Confidence 01111244 3333444443333111223 34778899999999999965
No 191
>PLN03017 trehalose-phosphatase
Probab=86.21 E-value=4.1 Score=37.62 Aligned_cols=72 Identities=13% Similarity=0.114 Sum_probs=52.1
Q ss_pred CHHHHHHHHHHhCCC---CCcEEEEeCChhcHHHHHHc---C-CeEEEECCCCCCCCCceEeCCHhHHHHHHHHHHhhc
Q 027403 134 SLEAIETAIRIANVD---PKKTIFFDDSARNIASAKAA---G-LHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEGE 205 (224)
Q Consensus 134 ~~~~~~~al~~~~~~---~~~~l~VgDs~~Di~~A~~~---G-~~~v~v~~~~~~~~~d~~i~~~~dl~~~i~~~~~~~ 205 (224)
+-.+.+.+++.++.. ..-.+|+||...|-.+-+.. | -..|.|+.......+.|.+++..++.++|..+.+-.
T Consensus 284 KG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k~T~A~y~L~dp~eV~~fL~~L~~~~ 362 (366)
T PLN03017 284 KGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPKDTDASYSLQDPSEVMDFLARLVEWK 362 (366)
T ss_pred HHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCCCCcceEeCCCHHHHHHHHHHHHHHH
Confidence 356667777777754 23589999999875554433 2 346778754446779999999999999998886653
No 192
>PLN02151 trehalose-phosphatase
Probab=85.17 E-value=3.9 Score=37.61 Aligned_cols=69 Identities=17% Similarity=0.183 Sum_probs=48.6
Q ss_pred CHHHHHHHHHHhCCCCC---cEEEEeCChhcHHHHHHc-----CCeEEEECCCCCCCCCceEeCCHhHHHHHHHHHHh
Q 027403 134 SLEAIETAIRIANVDPK---KTIFFDDSARNIASAKAA-----GLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWE 203 (224)
Q Consensus 134 ~~~~~~~al~~~~~~~~---~~l~VgDs~~Di~~A~~~-----G~~~v~v~~~~~~~~~d~~i~~~~dl~~~i~~~~~ 203 (224)
+-.+...+++.++..-. -++|+||-..|-.+-+.. |+ .|.|..+.....+.|.+++..++.+++..+.+
T Consensus 270 KG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~-gI~Vg~~~k~T~A~y~L~dp~eV~~~L~~L~~ 346 (354)
T PLN02151 270 KGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGL-GILVSKYAKETNASYSLQEPDEVMEFLERLVE 346 (354)
T ss_pred HHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCc-cEEeccCCCCCcceEeCCCHHHHHHHHHHHHH
Confidence 35566777777665422 389999999775554432 43 46676544567799999999999999987754
No 193
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=85.01 E-value=2.7 Score=42.70 Aligned_cols=133 Identities=14% Similarity=0.200 Sum_probs=80.3
Q ss_pred CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccce----eEeeccCCCCCCCCCCCCCcccc---cCCc
Q 027403 56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEG----IICFETINPRLQPADNTDGIENN---SFSS 125 (224)
Q Consensus 56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~----ii~~~~~~~~~~~~~~~~~~~~~---~~~~ 125 (224)
+|.+++++.++.+. .++.++|+-...-+.....+.|+.+.=+. ..++... |...++ ....
T Consensus 584 PPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~ef----------D~ls~~~~~~~~~ 653 (972)
T KOG0202|consen 584 PPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEF----------DDLSDEELDDAVR 653 (972)
T ss_pred CCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhh----------hcCCHHHHHHHhh
Confidence 57788988888886 78889999999999999999998655443 2222211 111111 0111
Q ss_pred cccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEEC-CCCC--CCCCceEe--CCHhHHHHHHH
Q 027403 126 NQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG-SSVP--VPPADHAL--NSIHNIKEAIP 199 (224)
Q Consensus 126 ~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~-~~~~--~~~~d~~i--~~~~dl~~~i~ 199 (224)
+...-..-.|..=..+.+.++-..+=|.|-||++||--+-+.+.+- |.++ +|.. ..-+|.++ +||..+...+.
T Consensus 654 ~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIG-IAMG~~GTdVaKeAsDMVL~DDnFstIvaAVE 731 (972)
T KOG0202|consen 654 RVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIG-IAMGISGTDVAKEASDMVLADDNFSTIVAAVE 731 (972)
T ss_pred cceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccc-eeecCCccHhhHhhhhcEEecCcHHHHHHHHH
Confidence 1111112234444445555554557799999999999998888764 4444 3322 33356654 44666655554
No 194
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=82.69 E-value=4.5 Score=37.79 Aligned_cols=117 Identities=15% Similarity=0.083 Sum_probs=72.6
Q ss_pred HHHHhcCCCCeEEEeCCChHHHHHHHHHc---CCccccceeEeeccCCCCCCCC-----CCCCCcc--cccCCccccccC
Q 027403 62 RNLLLSMPQRKIIFTNADQKHAMEVLGRL---GLEDCFEGIICFETINPRLQPA-----DNTDGIE--NNSFSSNQRILC 131 (224)
Q Consensus 62 ~~~L~~l~~~~~I~Tn~~~~~~~~~l~~l---gl~~~fd~ii~~~~~~~~~~~~-----~~~~~~~--~~~~~~~~~~~~ 131 (224)
...++....+..+.||+..........++ +...+||-+++...-+....-. -+++.+. ..--.+-..-.+
T Consensus 207 l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~~~~p~e~~~ 286 (424)
T KOG2469|consen 207 LSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGDNTGPLEQGG 286 (424)
T ss_pred hHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeeccccccccccccCCcchhcc
Confidence 33444445788999999987766665542 3456788776653222111100 1111111 000011122234
Q ss_pred CCCHHHHHHHHHHhCCCCCcEEEEeCChh-c-HHHHHHcCCeEEEECCC
Q 027403 132 KPSLEAIETAIRIANVDPKKTIFFDDSAR-N-IASAKAAGLHTVIVGSS 178 (224)
Q Consensus 132 KP~~~~~~~al~~~~~~~~~~l~VgDs~~-D-i~~A~~~G~~~v~v~~~ 178 (224)
+++...-+.+...+++...+++++||+.. | +.+-+..|++++.|...
T Consensus 287 ~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~pe 335 (424)
T KOG2469|consen 287 VYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLVAPE 335 (424)
T ss_pred cCCcchHHHHHHHhcccccceeecccceeeeEEecceecceEEEEEehh
Confidence 77889999999999999999999999985 6 45667789999988654
No 195
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=81.81 E-value=16 Score=32.00 Aligned_cols=39 Identities=8% Similarity=0.132 Sum_probs=34.2
Q ss_pred CCCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCC
Q 027403 54 KLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGL 92 (224)
Q Consensus 54 ~~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl 92 (224)
..++.||+.+.++.+. ..-+|+|-+-..+++....++|+
T Consensus 81 sa~lvPgA~etm~~l~~~~tp~v~STSY~qy~~r~a~~ig~ 121 (315)
T COG4030 81 SAKLVPGAEETMATLQERWTPVVISTSYTQYLRRTASMIGV 121 (315)
T ss_pred hcccCCChHHHHHHHhccCCceEEeccHHHHHHHHHHhcCC
Confidence 4678899999999998 57789998888999999999987
No 196
>PRK10444 UMP phosphatase; Provisional
Probab=81.76 E-value=2 Score=37.17 Aligned_cols=49 Identities=10% Similarity=0.030 Sum_probs=36.5
Q ss_pred CCChhHHHHHhcCC---CCeEEEeCCCh---HHHHHHHHHcCCccccceeEeecc
Q 027403 56 KPDPVLRNLLLSMP---QRKIIFTNADQ---KHAMEVLGRLGLEDCFEGIICFET 104 (224)
Q Consensus 56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~---~~~~~~l~~lgl~~~fd~ii~~~~ 104 (224)
.+.|++.++|++|+ .+++++||++. ..+...|..+|+.---+.|+++..
T Consensus 17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~ts~~ 71 (248)
T PRK10444 17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTSAM 71 (248)
T ss_pred eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEecHHH
Confidence 67899999998886 67889999876 456666777887533456777643
No 197
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=81.15 E-value=1.3 Score=38.36 Aligned_cols=49 Identities=16% Similarity=0.208 Sum_probs=38.3
Q ss_pred CChhHHHHHhcCC---CCeEEEeCCCh---HHHHHHHHHcCCccccceeEeeccC
Q 027403 57 PDPVLRNLLLSMP---QRKIIFTNADQ---KHAMEVLGRLGLEDCFEGIICFETI 105 (224)
Q Consensus 57 ~~~g~~~~L~~l~---~~~~I~Tn~~~---~~~~~~l~~lgl~~~fd~ii~~~~~ 105 (224)
+.|++.++|+.|+ .+++++||++. ..+...++.+|+.--.+.|+++...
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~~i~ts~~~ 76 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDEVFTPAPA 76 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHHHeEcHHHH
Confidence 7899999999986 67889999765 3577788889986445678887543
No 198
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=80.78 E-value=1.2 Score=40.53 Aligned_cols=50 Identities=22% Similarity=0.302 Sum_probs=40.0
Q ss_pred cCCCCHHHHHHHHHHh-------C--CCCCcEEEEeCCh-hcHHHHH---------------HcCCeEEEECCCC
Q 027403 130 LCKPSLEAIETAIRIA-------N--VDPKKTIFFDDSA-RNIASAK---------------AAGLHTVIVGSSV 179 (224)
Q Consensus 130 ~~KP~~~~~~~al~~~-------~--~~~~~~l~VgDs~-~Di~~A~---------------~~G~~~v~v~~~~ 179 (224)
.|||.+-.|+.|...+ + -+++.+.+|||.+ .|+.+|+ +-||.+|.|.+|.
T Consensus 269 ~GKPt~ltY~~A~~vl~~~ak~~~~~~~~k~lymvGDNP~sDv~GA~lf~~yap~~~~g~~~~~~w~SILV~TGV 343 (389)
T KOG1618|consen 269 LGKPTKLTYDYAEDVLRRQAKRRGGAAPIKKLYMVGDNPMSDVRGANLFHQYAPELGAGGSANYGWISILVRTGV 343 (389)
T ss_pred cCCCceehHHhHHHHHHHHHHhhcccCCcceeeeecCCCcccccccccccccccccccccccCCCceEEEEeeee
Confidence 4699999998765433 1 2578899999998 5999997 7899999998874
No 199
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=80.62 E-value=2.5 Score=36.90 Aligned_cols=54 Identities=15% Similarity=0.173 Sum_probs=38.0
Q ss_pred CCCCHHHHHHHHhccCCCCCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCC
Q 027403 35 YEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGL 92 (224)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl 92 (224)
.+++..++...+.+ ..+.+.+|+.++++.|. .++.|+|.+-.+-+..++++.|.
T Consensus 73 ~~l~k~~i~~~V~~----s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~ 129 (246)
T PF05822_consen 73 QGLTKSEIEEAVKE----SDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGV 129 (246)
T ss_dssp HT-BGGGHHHHHHC----S---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT-
T ss_pred cCcCHHHHHHHHHh----cchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCC
Confidence 44566666666664 56788899999998886 68889999999999999999865
No 200
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=77.66 E-value=53 Score=29.63 Aligned_cols=46 Identities=17% Similarity=0.223 Sum_probs=34.2
Q ss_pred CCHHHHHHHHHHhCCC--CCcEEEEeCChhcHHHHHHcCCeEEEECCCC
Q 027403 133 PSLEAIETAIRIANVD--PKKTIFFDDSARNIASAKAAGLHTVIVGSSV 179 (224)
Q Consensus 133 P~~~~~~~al~~~~~~--~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~ 179 (224)
++..+...+.+.++.. +=.++-+|||+||+..-..+... |.|..+.
T Consensus 208 dKg~A~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~~D~~-vvi~~~~ 255 (302)
T PRK12702 208 PGEQAVQLLLDCYQRHLGPIKALGIGCSPPDLAFLRWSEQK-VVLPSPI 255 (302)
T ss_pred CHHHHHHHHHHHHHhccCCceEEEecCChhhHHHHHhCCee-EEecCCC
Confidence 5667777777666543 44799999999999999998886 4454443
No 201
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=74.74 E-value=21 Score=31.87 Aligned_cols=91 Identities=20% Similarity=0.156 Sum_probs=56.7
Q ss_pred HHHHHhcCCCCeEEEeCCCh-HHHHHHHHHcCC----------------------------ccccceeEeeccCCCCCCC
Q 027403 61 LRNLLLSMPQRKIIFTNADQ-KHAMEVLGRLGL----------------------------EDCFEGIICFETINPRLQP 111 (224)
Q Consensus 61 ~~~~L~~l~~~~~I~Tn~~~-~~~~~~l~~lgl----------------------------~~~fd~ii~~~~~~~~~~~ 111 (224)
+..+|..+..+.+|+|.... ..+...++.+++ ..-||.+|+.|..++
T Consensus 68 La~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~lIaIERpGr---- 143 (291)
T PF14336_consen 68 LARALQALGKEVVIVTDERCAPVVKAAVRAAGLQGVDKVEIPPFFPDDFAQAFLEADGLLKEPRPDLLIAIERPGR---- 143 (291)
T ss_pred HHHHHHHcCCeEEEEECHHHHHHHHHHHHHHhhCcccccccccccccchhhhHHHHhhccccCCCCEEEEeCCccc----
Confidence 44567777789999998765 333333333332 123667888887776
Q ss_pred CCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhc
Q 027403 112 ADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARN 161 (224)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~D 161 (224)
+.||.|++..+-+-....-|--.+|..+.+ .+ =.++-|||+-|-
T Consensus 144 --a~dG~Y~nmrG~~I~~~~a~~D~lf~~a~~-~g---i~tigIGDGGNE 187 (291)
T PF14336_consen 144 --AADGNYYNMRGEDISHLVAPLDDLFLAAKE-PG---IPTIGIGDGGNE 187 (291)
T ss_pred --CCCCCEecCcCCcCccccccHHHHHHHhhc-CC---CCEEEECCCchh
Confidence 477877666665433334455555555544 34 358999999873
No 202
>PLN02423 phosphomannomutase
Probab=74.23 E-value=4.1 Score=35.03 Aligned_cols=30 Identities=20% Similarity=0.161 Sum_probs=25.9
Q ss_pred CCCcEEEEeC----ChhcHHHHHHcCCeEEEECC
Q 027403 148 DPKKTIFFDD----SARNIASAKAAGLHTVIVGS 177 (224)
Q Consensus 148 ~~~~~l~VgD----s~~Di~~A~~~G~~~v~v~~ 177 (224)
++++++.+|| +.||+..-+.-|..++-|..
T Consensus 199 ~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~ 232 (245)
T PLN02423 199 DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTS 232 (245)
T ss_pred CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCC
Confidence 8999999999 79999999877888776644
No 203
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=73.89 E-value=10 Score=36.51 Aligned_cols=91 Identities=18% Similarity=0.202 Sum_probs=65.2
Q ss_pred CCChhHHHHHhcCCCCeE---EEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403 56 KPDPVLRNLLLSMPQRKI---IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 132 (224)
Q Consensus 56 ~~~~g~~~~L~~l~~~~~---I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K 132 (224)
+++-...+.++.|+.+++ |+|-+....++.++....- -|+.-++.... ...|-
T Consensus 255 ~~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~khp~-----MiLkeedfa~~-------------------~iNW~ 310 (574)
T COG3882 255 EAFKTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKHPD-----MILKEEDFAVF-------------------QINWD 310 (574)
T ss_pred hhHHHHHHHHHHHHhccEEEEEecCCchhhHHHHHhhCCC-----eEeeHhhhhhh-------------------eecCC
Confidence 566677888888886655 6666777888888876541 12222222211 11269
Q ss_pred CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCC
Q 027403 133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGL 170 (224)
Q Consensus 133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~ 170 (224)
|+.+-...+++++|+-.+..+|++|++...+--+.-+-
T Consensus 311 ~K~eNirkIAkklNlg~dSmvFiDD~p~ErE~vk~~~~ 348 (574)
T COG3882 311 PKAENIRKIAKKLNLGLDSMVFIDDNPAERELVKRELP 348 (574)
T ss_pred cchhhHHHHHHHhCCCccceEEecCCHHHHHHHHhcCc
Confidence 99999999999999999999999999987777766554
No 204
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=72.76 E-value=12 Score=33.60 Aligned_cols=41 Identities=24% Similarity=0.334 Sum_probs=31.3
Q ss_pred CCCCChhHHHHHhcCC---CCeEEEeCCCh---HHHHHHHHHcCCcc
Q 027403 54 KLKPDPVLRNLLLSMP---QRKIIFTNADQ---KHAMEVLGRLGLED 94 (224)
Q Consensus 54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~---~~~~~~l~~lgl~~ 94 (224)
.-.+.||+.++++.|+ ++++++||++. +...+.++.+|+..
T Consensus 36 g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~~ 82 (306)
T KOG2882|consen 36 GEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFNS 82 (306)
T ss_pred cCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCccc
Confidence 4568888888887775 78889999864 56667788888754
No 205
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=72.01 E-value=16 Score=31.12 Aligned_cols=51 Identities=24% Similarity=0.307 Sum_probs=37.0
Q ss_pred CCCChhHHHHHhcCC---CCeEEEeCCC---hHHHHHHHHH-cCCccccceeEeeccC
Q 027403 55 LKPDPVLRNLLLSMP---QRKIIFTNAD---QKHAMEVLGR-LGLEDCFEGIICFETI 105 (224)
Q Consensus 55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~---~~~~~~~l~~-lgl~~~fd~ii~~~~~ 105 (224)
-.++|++.+.|+.++ ++..++||++ ...+...+.. +|+.--++.++++...
T Consensus 13 ~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits~~~ 70 (236)
T TIGR01460 13 HKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITSGSV 70 (236)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeHHHH
Confidence 457889999999994 7788999876 3445555555 7887667778877543
No 206
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=69.04 E-value=5.9 Score=34.29 Aligned_cols=41 Identities=22% Similarity=0.153 Sum_probs=33.6
Q ss_pred CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCcccc
Q 027403 56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCF 96 (224)
Q Consensus 56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~f 96 (224)
...+...++|++|+ .+++++||++...+...++.+|+..+|
T Consensus 21 ~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~ 64 (273)
T PRK00192 21 YSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPF 64 (273)
T ss_pred cCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCE
Confidence 35567888888875 678899999999999999999986544
No 207
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=69.00 E-value=11 Score=37.67 Aligned_cols=47 Identities=13% Similarity=0.104 Sum_probs=37.9
Q ss_pred CCCHHHHHHHHHHhCCCCCcEEEE--eCChhcHHHHHHcCCeEEEECCCC
Q 027403 132 KPSLEAIETAIRIANVDPKKTIFF--DDSARNIASAKAAGLHTVIVGSSV 179 (224)
Q Consensus 132 KP~~~~~~~al~~~~~~~~~~l~V--gDs~~Di~~A~~~G~~~v~v~~~~ 179 (224)
-.+..+.+.+++.++++.++++.| ||+.||+..-+.+|.. |.+..+.
T Consensus 612 vdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~g-VAM~~~~ 660 (694)
T PRK14502 612 NDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSP-ILVQRPG 660 (694)
T ss_pred CCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCce-EEEcCCC
Confidence 456677777888888888888888 9999999999999995 6665554
No 208
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=68.86 E-value=12 Score=33.00 Aligned_cols=72 Identities=21% Similarity=0.306 Sum_probs=47.5
Q ss_pred CCeEEEeCCCh---HHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhC
Q 027403 70 QRKIIFTNADQ---KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIAN 146 (224)
Q Consensus 70 ~~~~I~Tn~~~---~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~ 146 (224)
.+++|+|.++. ..+.+-|...|+. +|..+.-. |-|+..+ ++.++
T Consensus 187 iRtalVTAR~apah~RvI~TLr~Wgv~--vDEafFLg---------------------------G~~K~~v----L~~~~ 233 (264)
T PF06189_consen 187 IRTALVTARSAPAHERVIRTLRSWGVR--VDEAFFLG---------------------------GLPKGPV----LKAFR 233 (264)
T ss_pred eEEEEEEcCCCchhHHHHHHHHHcCCc--HhHHHHhC---------------------------CCchhHH----HHhhC
Confidence 57889998765 3444455566663 33222111 3455544 44444
Q ss_pred CCCCcEEEEeCChhcHHHHHHcCCeEEEECCCC
Q 027403 147 VDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 179 (224)
Q Consensus 147 ~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~ 179 (224)
| -+|++|....+.+|. .+.+++.|..|.
T Consensus 234 --p--hIFFDDQ~~H~~~a~-~~vps~hVP~gv 261 (264)
T PF06189_consen 234 --P--HIFFDDQDGHLESAS-KVVPSGHVPYGV 261 (264)
T ss_pred --C--CEeecCchhhhhHhh-cCCCEEeccCCc
Confidence 2 399999999999998 799999998875
No 209
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=65.83 E-value=10 Score=32.38 Aligned_cols=46 Identities=13% Similarity=0.102 Sum_probs=35.1
Q ss_pred CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEe
Q 027403 56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIIC 101 (224)
Q Consensus 56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~ 101 (224)
.+.+...++|++++ .+++++|+++...+...++.+++....+.+|+
T Consensus 20 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~ 68 (270)
T PRK10513 20 TISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCIT 68 (270)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEE
Confidence 45567778888886 67889999999999999999997643334444
No 210
>PLN03190 aminophospholipid translocase; Provisional
Probab=64.27 E-value=6 Score=41.96 Aligned_cols=49 Identities=16% Similarity=0.212 Sum_probs=37.2
Q ss_pred CcEEEEeCChhcHHHHHHcCCeEEEECCC--CC-CCCCceEeCCHhHHHHHHH
Q 027403 150 KKTIFFDDSARNIASAKAAGLHTVIVGSS--VP-VPPADHALNSIHNIKEAIP 199 (224)
Q Consensus 150 ~~~l~VgDs~~Di~~A~~~G~~~v~v~~~--~~-~~~~d~~i~~~~dl~~~i~ 199 (224)
.-|++|||+.||+-+-++|.+- |++... .+ ..-+||.+..|+.|..+|.
T Consensus 872 ~vtlaIGDGaNDv~mIq~AdVG-IGIsG~EG~qA~~aSDfaI~~Fr~L~rLLl 923 (1178)
T PLN03190 872 DMTLAIGDGANDVSMIQMADVG-VGISGQEGRQAVMASDFAMGQFRFLVPLLL 923 (1178)
T ss_pred cEEEEECCCcchHHHHHhcCee-eeecCchhHHHHHhhccchhhhHHHHHHHH
Confidence 4599999999999999988764 355321 11 3347999999999999874
No 211
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=62.13 E-value=14 Score=30.49 Aligned_cols=35 Identities=17% Similarity=0.120 Sum_probs=29.0
Q ss_pred hhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCc
Q 027403 59 PVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLE 93 (224)
Q Consensus 59 ~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~ 93 (224)
+..+++|+.++ .+++++||++...+...++.+|+.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 33667777765 678899999999999999999985
No 212
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=61.73 E-value=23 Score=34.54 Aligned_cols=79 Identities=13% Similarity=0.253 Sum_probs=59.3
Q ss_pred CChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCC
Q 027403 57 PDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 133 (224)
Q Consensus 57 ~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP 133 (224)
..||+++-+..|+ .+.+.+|+-++--+...-...|+++|... +||
T Consensus 448 vK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDdfiAe--------------------------------atP 495 (681)
T COG2216 448 VKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFIAE--------------------------------ATP 495 (681)
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchhhhhc--------------------------------CCh
Confidence 5689999888776 78999999888778888888998877653 355
Q ss_pred CHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcC
Q 027403 134 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAG 169 (224)
Q Consensus 134 ~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G 169 (224)
...+ ..+++-+-.-+-+-|.||+.||.-+-..+.
T Consensus 496 EdK~--~~I~~eQ~~grlVAMtGDGTNDAPALAqAd 529 (681)
T COG2216 496 EDKL--ALIRQEQAEGRLVAMTGDGTNDAPALAQAD 529 (681)
T ss_pred HHHH--HHHHHHHhcCcEEEEcCCCCCcchhhhhcc
Confidence 5443 566666666778999999999865544443
No 213
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=58.63 E-value=13 Score=31.47 Aligned_cols=38 Identities=13% Similarity=0.099 Sum_probs=31.3
Q ss_pred CChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCcc
Q 027403 57 PDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLED 94 (224)
Q Consensus 57 ~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~ 94 (224)
..+...++|++++ .+++++|+++...+...++.+|+.+
T Consensus 16 ~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 16 EPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred CchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 4456788888875 6788999999999999999999754
No 214
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=57.16 E-value=32 Score=30.53 Aligned_cols=54 Identities=11% Similarity=0.097 Sum_probs=34.5
Q ss_pred CCCCHHHHHHHHhccCCCCCCCCChhHHHHHhcC---CCCeEEEeCCChHHHHHHHHHcCC
Q 027403 35 YEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGL 92 (224)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l---~~~~~I~Tn~~~~~~~~~l~~lgl 92 (224)
.+++.......+.. ..+.+..|..++...| ..++.|+|.+--+.+..++.+...
T Consensus 121 ~~f~k~~I~~~Va~----s~i~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~ 177 (298)
T KOG3128|consen 121 GGFSKNAIDDIVAE----SNIALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLV 177 (298)
T ss_pred CCcCHHHHHHHHHH----hhHHHHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhc
Confidence 34455555554443 3344555666666655 478999999998888877776554
No 215
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=57.11 E-value=64 Score=31.04 Aligned_cols=99 Identities=9% Similarity=0.059 Sum_probs=54.7
Q ss_pred CChhHHHHHhcCCCCeEEEeCCChHHHHHHHHH-cCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCH
Q 027403 57 PDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGR-LGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSL 135 (224)
Q Consensus 57 ~~~g~~~~L~~l~~~~~I~Tn~~~~~~~~~l~~-lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~ 135 (224)
..+.+.+.++..+ +.+|+|.+++.++....+. +| +|.+++.+-... .+|.+-+.+.+..+..+.-+.
T Consensus 111 l~~~a~~~~~~~g-~~vvVSASp~~~Vepfa~~~LG----id~VIgTeLev~-------~~G~~TG~i~g~~~c~Ge~Kv 178 (497)
T PLN02177 111 VHPETWRVFNSFG-KRYIITASPRIMVEPFVKTFLG----ADKVLGTELEVS-------KSGRATGFMKKPGVLVGDHKR 178 (497)
T ss_pred cCHHHHHHHHhCC-CEEEEECCcHHHHHHHHHHcCC----CCEEEecccEEC-------cCCEEeeeecCCCCCccHHHH
Confidence 5556666666654 4599999999999999975 78 556666542110 011111111100000011122
Q ss_pred HHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCe
Q 027403 136 EAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLH 171 (224)
Q Consensus 136 ~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~ 171 (224)
..+.+.++.+... +..|||.+|..--..++-.
T Consensus 179 ---~rl~~~~g~~~~~-~aYgDS~sD~plL~~a~e~ 210 (497)
T PLN02177 179 ---DAVLKEFGDALPD-LGLGDRETDHDFMSICKEG 210 (497)
T ss_pred ---HHHHHHhCCCCce-EEEECCccHHHHHHhCCcc
Confidence 2222445544333 8999999998887777643
No 216
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=55.35 E-value=13 Score=30.65 Aligned_cols=39 Identities=8% Similarity=-0.076 Sum_probs=32.4
Q ss_pred CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCcc
Q 027403 56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLED 94 (224)
Q Consensus 56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~ 94 (224)
.+.+...+.|++++ .+++++|+++...+...++.+++..
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~ 59 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSG 59 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCC
Confidence 46677888888885 6788999999999999999988753
No 217
>PTZ00174 phosphomannomutase; Provisional
Probab=53.87 E-value=16 Score=31.26 Aligned_cols=41 Identities=12% Similarity=-0.022 Sum_probs=31.8
Q ss_pred CCCHHHHHHHHHHhCCCCCcEEEEeC----ChhcHHHHHHcCCeEEEEC
Q 027403 132 KPSLEAIETAIRIANVDPKKTIFFDD----SARNIASAKAAGLHTVIVG 176 (224)
Q Consensus 132 KP~~~~~~~al~~~~~~~~~~l~VgD----s~~Di~~A~~~G~~~v~v~ 176 (224)
=.+......+++. +++++.||| +.||+..-+.++...+.|.
T Consensus 187 vsKg~al~~L~~~----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~ 231 (247)
T PTZ00174 187 WDKTYCLRHLEND----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK 231 (247)
T ss_pred CcHHHHHHHHHhh----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC
Confidence 3455566666666 689999999 8999999988888777776
No 218
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=53.20 E-value=16 Score=30.20 Aligned_cols=39 Identities=10% Similarity=-0.059 Sum_probs=32.1
Q ss_pred CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCcc
Q 027403 56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLED 94 (224)
Q Consensus 56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~ 94 (224)
.+.|...++|++++ .+++++|+++...+...++.+|+..
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 61 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSG 61 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC
Confidence 35577888888875 6788999999999999999998754
No 219
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=52.62 E-value=2e+02 Score=26.91 Aligned_cols=107 Identities=11% Similarity=0.114 Sum_probs=70.8
Q ss_pred hhHHHHHhcCC-CCeEEEeCCChHHHHH-HHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHH
Q 027403 59 PVLRNLLLSMP-QRKIIFTNADQKHAME-VLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLE 136 (224)
Q Consensus 59 ~g~~~~L~~l~-~~~~I~Tn~~~~~~~~-~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~ 136 (224)
..+.+.+..|. ...++++++-...+.. .+.-+. .=|.|+...+.. -+.-.
T Consensus 66 ~~lE~~~a~LEg~~~~~afsSGmaAI~~~~l~ll~---~GD~vl~~~~~Y-------------------------G~t~~ 117 (396)
T COG0626 66 DALEEALAELEGGEDAFAFSSGMAAISTALLALLK---AGDHVLLPDDLY-------------------------GGTYR 117 (396)
T ss_pred HHHHHHHHHhhCCCcEEEecCcHHHHHHHHHHhcC---CCCEEEecCCcc-------------------------chHHH
Confidence 34556666665 5666666665554444 333222 127788887753 56788
Q ss_pred HHHHHHHHhCCCCCcEEEEeCChh-cHHHHHHc-CCeEEEECCCCCCCCCceEeCCHhHHHHHHH
Q 027403 137 AIETAIRIANVDPKKTIFFDDSAR-NIASAKAA-GLHTVIVGSSVPVPPADHALNSIHNIKEAIP 199 (224)
Q Consensus 137 ~~~~al~~~~~~~~~~l~VgDs~~-Di~~A~~~-G~~~v~v~~~~~~~~~d~~i~~~~dl~~~i~ 199 (224)
++...++++|+. +.+++++.. .+..|... +.+.||+.++. ++...+.|+..+.++..
T Consensus 118 ~~~~~l~~~gi~---~~~~d~~~~~~~~~~~~~~~tk~v~lEtPs---NP~l~v~DI~~i~~~A~ 176 (396)
T COG0626 118 LFEKILQKFGVE---VTFVDPGDDEALEAAIKEPNTKLVFLETPS---NPLLEVPDIPAIARLAK 176 (396)
T ss_pred HHHHHHHhcCeE---EEEECCCChHHHHHHhcccCceEEEEeCCC---CcccccccHHHHHHHHH
Confidence 899999999975 888888765 55555553 88999998874 35666667777666554
No 220
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=52.42 E-value=22 Score=29.10 Aligned_cols=39 Identities=21% Similarity=0.232 Sum_probs=32.9
Q ss_pred CCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCc
Q 027403 55 LKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLE 93 (224)
Q Consensus 55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~ 93 (224)
-.+.+...++|+.+. .+++++|+++...+...++.+++.
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~ 55 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID 55 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccch
Confidence 346678888888775 778899999999999999999876
No 221
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=51.33 E-value=59 Score=29.86 Aligned_cols=83 Identities=10% Similarity=0.065 Sum_probs=50.8
Q ss_pred CCCCCChhHHHHHhcCC----CCeEEEeCCChHHHHHHHH---HcCC----------ccccceeEeeccCCCCCCCCCCC
Q 027403 53 EKLKPDPVLRNLLLSMP----QRKIIFTNADQKHAMEVLG---RLGL----------EDCFEGIICFETINPRLQPADNT 115 (224)
Q Consensus 53 ~~~~~~~g~~~~L~~l~----~~~~I~Tn~~~~~~~~~l~---~lgl----------~~~fd~ii~~~~~~~~~~~~~~~ 115 (224)
-...++||+..+.+.|. ..++-+||++......+-+ .-++ ..+||.++.+..
T Consensus 193 ~tr~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~~L~efi~~~~~P~GPl~L~~~g~~~~~i~~sga----------- 261 (373)
T COG4850 193 LTRQVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFPTLQEFITNRNFPYGPLLLRRWGGVLDNIIESGA----------- 261 (373)
T ss_pred cccCCCCCHHHHHHHHHhcCCCCeEEecCChhHhHHHHHHHHhcCCCCCCchhHhhcCCcccccccchh-----------
Confidence 35689999999888885 4788999999864333322 2211 123344443332
Q ss_pred CCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCCh-hcHHH
Q 027403 116 DGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIAS 164 (224)
Q Consensus 116 ~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~ 164 (224)
-.+......+++++. -.+.+.||||- .|.+.
T Consensus 262 ----------------~rK~~~l~nil~~~p--~~kfvLVGDsGE~DpeI 293 (373)
T COG4850 262 ----------------ARKGQSLRNILRRYP--DRKFVLVGDSGEHDPEI 293 (373)
T ss_pred ----------------hhcccHHHHHHHhCC--CceEEEecCCCCcCHHH
Confidence 224455556666665 46688999995 57553
No 222
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=50.54 E-value=22 Score=30.20 Aligned_cols=38 Identities=21% Similarity=0.352 Sum_probs=31.5
Q ss_pred CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCc
Q 027403 56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLE 93 (224)
Q Consensus 56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~ 93 (224)
.+.+...++|++++ .+++++|+++...+...++.+++.
T Consensus 16 ~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~ 56 (256)
T TIGR00099 16 TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLD 56 (256)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 45567788888875 678899999999999999998875
No 223
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=50.22 E-value=54 Score=30.73 Aligned_cols=131 Identities=22% Similarity=0.224 Sum_probs=77.1
Q ss_pred CCCChhHHHHHhcCC---CCeEEEeCCCh------------HHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcc
Q 027403 55 LKPDPVLRNLLLSMP---QRKIIFTNADQ------------KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIE 119 (224)
Q Consensus 55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~------------~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~ 119 (224)
..+++.+..=|+.+. +.++|.||... .-+...+..+++- |...++.-.-..
T Consensus 103 ~~l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~anl~vP--i~~~~A~~~~~y------------ 168 (422)
T KOG2134|consen 103 RILFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKKIKAIVANLGVP--IQLLAAIIKGKY------------ 168 (422)
T ss_pred eeeccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHHHHHHHHhcCCc--eEEeeeccCCcc------------
Confidence 346677777777775 67789999652 2344455555542 332222222222
Q ss_pred cccCCccccccCCCCHHHHHHHHHHhC----CCCCcEEEEeCC---------------hhcHHHHHHcCCeEEEE-----
Q 027403 120 NNSFSSNQRILCKPSLEAIETAIRIAN----VDPKKTIFFDDS---------------ARNIASAKAAGLHTVIV----- 175 (224)
Q Consensus 120 ~~~~~~~~~~~~KP~~~~~~~al~~~~----~~~~~~l~VgDs---------------~~Di~~A~~~G~~~v~v----- 175 (224)
+||...+++...+..+ +..+...||||- ..|+.-|.++|+.+..=
T Consensus 169 -----------RKP~tGMwe~~~~~~nd~~~Isek~s~fvgdaagr~~~~~~~kkd~S~~D~~FAaN~gvkF~tPeefF~ 237 (422)
T KOG2134|consen 169 -----------RKPSTGMWEFLKRLENDSVEISEKASIFVGDAAGRPLDALRRKKDHSSADRKFAANAGVKFKTPEEFFL 237 (422)
T ss_pred -----------cCcchhHHHHHHHHhhccceeeechhhhhhhhccCccccccCcccccHHHHHHHHhcCCccCCHHHHhc
Confidence 4999999999998776 244556788874 24788899999876422
Q ss_pred CCCCCCCCCceEeCCHhHHHHHHHHHHhhcCcchhhh
Q 027403 176 GSSVPVPPADHALNSIHNIKEAIPEIWEGEGEQLEQV 212 (224)
Q Consensus 176 ~~~~~~~~~d~~i~~~~dl~~~i~~~~~~~~~~~~~~ 212 (224)
..+... --.--++-...+.+.....++..+++ |-|
T Consensus 238 g~~~~~-~~~~~fdp~n~i~~~t~~~~~~~~~~-eiV 272 (422)
T KOG2134|consen 238 GVGVVT-WNSPGFDPKNVISRATSLCLKLDGHG-EIV 272 (422)
T ss_pred cccccc-cCCCCCCchhHHhhhcchhcccCCCC-cEE
Confidence 111111 00011223355666666678888886 544
No 224
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=49.63 E-value=31 Score=29.40 Aligned_cols=40 Identities=18% Similarity=0.312 Sum_probs=34.0
Q ss_pred CCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCcc
Q 027403 55 LKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLED 94 (224)
Q Consensus 55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~ 94 (224)
-...+...++|++++ .+++++|+++...+...++.+++..
T Consensus 19 ~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~ 61 (264)
T COG0561 19 KTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG 61 (264)
T ss_pred CccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc
Confidence 346778888888775 7788999999999999999999875
No 225
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=49.27 E-value=20 Score=30.31 Aligned_cols=61 Identities=15% Similarity=0.125 Sum_probs=27.3
Q ss_pred CCCCHHHHHHHHHHhCCC---CCcEEEEeCChhcHHHHHHcCC-----eEEEECCCC---CCCCCceEeCCH
Q 027403 131 CKPSLEAIETAIRIANVD---PKKTIFFDDSARNIASAKAAGL-----HTVIVGSSV---PVPPADHALNSI 191 (224)
Q Consensus 131 ~KP~~~~~~~al~~~~~~---~~~~l~VgDs~~Di~~A~~~G~-----~~v~v~~~~---~~~~~d~~i~~~ 191 (224)
+..+-.+...+++..+.. ++-++|+||...|-.+-..+.- .++.|.... ....+.|.++|.
T Consensus 163 ~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~p 234 (235)
T PF02358_consen 163 GVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDDP 234 (235)
T ss_dssp T--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES------------------
T ss_pred CCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeecccccccccccccccC
Confidence 344667778888888765 7789999999987665555433 356666543 356678877663
No 226
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=48.70 E-value=48 Score=33.66 Aligned_cols=61 Identities=11% Similarity=0.245 Sum_probs=40.5
Q ss_pred CHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEE-CC-CCC-CCCCceEeCCHhHHHHHH
Q 027403 134 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV-GS-SVP-VPPADHALNSIHNIKEAI 198 (224)
Q Consensus 134 ~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v-~~-~~~-~~~~d~~i~~~~dl~~~i 198 (224)
+..+-..+.++-+ ..+-.|||+.||+-.-..+.+. |+| +. |.+ .-.+|+.+..|..+.+++
T Consensus 769 KA~v~~llq~~t~---krvc~IGDGGNDVsMIq~A~~G-iGI~gkEGkQASLAADfSItqF~Hv~rLL 832 (1051)
T KOG0210|consen 769 KAQVVRLLQKKTG---KRVCAIGDGGNDVSMIQAADVG-IGIVGKEGKQASLAADFSITQFSHVSRLL 832 (1051)
T ss_pred HHHHHHHHHHhhC---ceEEEEcCCCccchheeecccc-eeeecccccccchhccccHHHHHHHHHHh
Confidence 4555555555544 7899999999997766555543 333 22 222 234899999999998876
No 227
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=47.76 E-value=31 Score=29.36 Aligned_cols=35 Identities=20% Similarity=0.153 Sum_probs=28.7
Q ss_pred hhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCc
Q 027403 59 PVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLE 93 (224)
Q Consensus 59 ~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~ 93 (224)
+...+++++++ .+++++|+++...+...++.+|+.
T Consensus 19 ~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~ 56 (256)
T TIGR01486 19 GPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE 56 (256)
T ss_pred hHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 34667777765 678899999999999999999975
No 228
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=47.19 E-value=23 Score=30.33 Aligned_cols=39 Identities=15% Similarity=0.112 Sum_probs=32.5
Q ss_pred CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCcc
Q 027403 56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLED 94 (224)
Q Consensus 56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~ 94 (224)
.+.+...++|++++ .+++++|+++...+...++.+++..
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 60 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDA 60 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCC
Confidence 46677788888886 6788999999999999999999754
No 229
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=45.59 E-value=39 Score=29.55 Aligned_cols=63 Identities=14% Similarity=0.300 Sum_probs=44.4
Q ss_pred HHHHHHHHHhCCCCCcEEEEeCC------hhcHHHHHHcCCeEEEECCCCCCCCCceEeCCHhHHHHHHHHHH
Q 027403 136 EAIETAIRIANVDPKKTIFFDDS------ARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIW 202 (224)
Q Consensus 136 ~~~~~al~~~~~~~~~~l~VgDs------~~Di~~A~~~G~~~v~v~~~~~~~~~d~~i~~~~dl~~~i~~~~ 202 (224)
+.=...+++++++ +++.=|| ..=+.+|++.|++.+.|.+|.. +....++.++.++.+.+..++
T Consensus 187 e~n~al~~~~~i~---~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~~-~~~~~~~~~~~el~~~l~~~~ 255 (256)
T TIGR00715 187 ELEKALLREYRID---AVVTKASGEQGGELEKVKAAEALGINVIRIARPQT-IPGVAIFDDISQLNQFVARLL 255 (256)
T ss_pred HHHHHHHHHcCCC---EEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCCC-CCCCccCCCHHHHHHHHHHhc
Confidence 3334566666754 5555444 2358999999999999999863 334567889999998887653
No 230
>PRK10976 putative hydrolase; Provisional
Probab=45.56 E-value=25 Score=29.92 Aligned_cols=39 Identities=10% Similarity=0.136 Sum_probs=31.9
Q ss_pred CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCcc
Q 027403 56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLED 94 (224)
Q Consensus 56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~ 94 (224)
.+.+...++|++++ .+++++|+++...+...++.+|+..
T Consensus 19 ~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 60 (266)
T PRK10976 19 TLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKS 60 (266)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCC
Confidence 45567788888885 6788999999999999999998753
No 231
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=45.11 E-value=27 Score=29.68 Aligned_cols=39 Identities=18% Similarity=0.100 Sum_probs=31.6
Q ss_pred CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCcc
Q 027403 56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLED 94 (224)
Q Consensus 56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~ 94 (224)
.+.|...++|++++ .+++++|+++...+...++.+++..
T Consensus 20 ~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 61 (272)
T PRK10530 20 TILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALDT 61 (272)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCC
Confidence 45566778888875 6788999999999999999998753
No 232
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=43.22 E-value=1.5e+02 Score=26.10 Aligned_cols=57 Identities=12% Similarity=0.406 Sum_probs=36.4
Q ss_pred HHHHHHhCCCCCcEEEEeCChh------cHHHHHHcCCeEEEECCCCCCCCCceEeCCHhHHHHHHHHH
Q 027403 139 ETAIRIANVDPKKTIFFDDSAR------NIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEI 201 (224)
Q Consensus 139 ~~al~~~~~~~~~~l~VgDs~~------Di~~A~~~G~~~v~v~~~~~~~~~d~~i~~~~dl~~~i~~~ 201 (224)
...+++.+.+ ++.-=||-. =+.+|.+.|++.|.|.++...+ ..+.++.++.+.+.++
T Consensus 189 ~all~q~~id---~vItK~SG~~Gg~~~Ki~aA~eLgi~VI~I~Rp~~~~---~~~~~v~~~~~~l~~~ 251 (257)
T COG2099 189 KALLEQYRID---VVVTKNSGGAGGTYEKIEAARELGIPVIMIERPIDYP---AGFGDVTDLDAALAQL 251 (257)
T ss_pred HHHHHHhCCC---EEEEccCCcccCcHHHHHHHHHcCCcEEEEecCCcCC---cccchhhHHHHHHHHH
Confidence 4456666654 566555543 4999999999999999982122 2334556666555544
No 233
>PRK05294 carB carbamoyl phosphate synthase large subunit; Reviewed
Probab=43.06 E-value=2.3e+02 Score=29.88 Aligned_cols=71 Identities=10% Similarity=0.008 Sum_probs=48.4
Q ss_pred CHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCCCCCCceEeCCHhHHHHHHHHHHhh
Q 027403 134 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEG 204 (224)
Q Consensus 134 ~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~~~~d~~i~~~~dl~~~i~~~~~~ 204 (224)
++..+...++++|++--....+.+...-...+...|.+.+.=+........-.++.+..||.+.+...+..
T Consensus 669 DK~~~~~~L~~~GIp~P~~~~~~s~ee~~~~~~~igyPvvVKP~~~~Gg~Gv~iv~~~eeL~~~~~~a~~~ 739 (1066)
T PRK05294 669 DRERFSKLLEKLGIPQPPNGTATSVEEALEVAEEIGYPVLVRPSYVLGGRAMEIVYDEEELERYMREAVKV 739 (1066)
T ss_pred CHHHHHHHHHHcCcCCCCeEEECCHHHHHHHHHhcCCCeEEEeCCCCCCCcEEEECCHHHHHHHHHHHHhh
Confidence 66777889999999766677776544334556777887543332222233456889999999999887764
No 234
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=42.73 E-value=56 Score=32.51 Aligned_cols=50 Identities=20% Similarity=0.297 Sum_probs=41.1
Q ss_pred CCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCc-cccce-eEeecc
Q 027403 55 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLE-DCFEG-IICFET 104 (224)
Q Consensus 55 ~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~-~~fd~-ii~~~~ 104 (224)
+++-|++.++|+.++ +.+.|.|-+.+.++..+.+-+.-. .+|.. |+|-++
T Consensus 200 vKlRP~~~efL~~~sklfemhVyTmg~R~YA~~i~~liDP~~~lF~dRIisrde 253 (635)
T KOG0323|consen 200 VKLRPFVHEFLKEANKLFEMHVYTMGTRDYALEIAKLIDPEGKYFGDRIISRDE 253 (635)
T ss_pred EEeCccHHHHHHHHHhhceeEEEeccchHHHHHHHHHhCCCCccccceEEEecC
Confidence 567799999999998 889999999999999998887653 56764 666655
No 235
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=42.72 E-value=42 Score=28.91 Aligned_cols=37 Identities=14% Similarity=0.126 Sum_probs=30.4
Q ss_pred CChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCc
Q 027403 57 PDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLE 93 (224)
Q Consensus 57 ~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~ 93 (224)
..+...++|++++ .+++++|+++...+...++.+|+.
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ 64 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence 4455677777775 678899999999999999999974
No 236
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=41.67 E-value=31 Score=28.38 Aligned_cols=37 Identities=8% Similarity=0.038 Sum_probs=29.9
Q ss_pred CChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCc
Q 027403 57 PDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLE 93 (224)
Q Consensus 57 ~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~ 93 (224)
+.+...++|++++ .+++++|+++...+...++.+|+.
T Consensus 16 i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~ 55 (225)
T TIGR01482 16 INESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTP 55 (225)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC
Confidence 4566777888864 678899999999999999998854
No 237
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=39.81 E-value=61 Score=28.19 Aligned_cols=64 Identities=17% Similarity=0.352 Sum_probs=44.4
Q ss_pred HHHHHHHHHHhCCCCCcEEEEeCCh-----hcHHHHHHcCCeEEEECCCCCCCCCceEeCCHhHHHHHHHHHH
Q 027403 135 LEAIETAIRIANVDPKKTIFFDDSA-----RNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIW 202 (224)
Q Consensus 135 ~~~~~~al~~~~~~~~~~l~VgDs~-----~Di~~A~~~G~~~v~v~~~~~~~~~d~~i~~~~dl~~~i~~~~ 202 (224)
.+.=...+++.+++ +++.=||- .=+.+|+..|++.+.|.+|.. +.....+.++.++.+.+...+
T Consensus 179 ~e~n~aL~~~~~i~---~lVtK~SG~~g~~eKi~AA~~lgi~vivI~RP~~-~~~~~~~~~~~e~~~~l~~~~ 247 (248)
T PRK08057 179 LELERALLRQHRID---VVVTKNSGGAGTEAKLEAARELGIPVVMIARPAL-PYADREFEDVAELVAWLRHLL 247 (248)
T ss_pred HHHHHHHHHHcCCC---EEEEcCCCchhhHHHHHHHHHcCCeEEEEeCCCC-CCCCcccCCHHHHHHHHHHhh
Confidence 34445667777764 44444442 248999999999999999863 223366789999998887653
No 238
>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=39.72 E-value=68 Score=29.83 Aligned_cols=80 Identities=14% Similarity=0.154 Sum_probs=55.7
Q ss_pred CCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403 55 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 132 (224)
Q Consensus 55 ~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K 132 (224)
++--||+.-+|..+. +.++++|...--.+..+++.+.-..|...-...+..... .++
T Consensus 213 f~kRPgvD~FL~~~a~~yEIVi~sse~gmt~~pl~d~lDP~g~IsYkLfr~~t~y~---------------~G~------ 271 (393)
T KOG2832|consen 213 FKKRPGVDYFLGHLAKYYEIVVYSSEQGMTVFPLLDALDPKGYISYKLFRGATKYE---------------EGH------ 271 (393)
T ss_pred eccCchHHHHHHhhcccceEEEEecCCccchhhhHhhcCCcceEEEEEecCccccc---------------Ccc------
Confidence 346789999999997 889999999888888889987766665543333322110 111
Q ss_pred CCHHHHHHHHHHhCCCCCcEEEEeCChh
Q 027403 133 PSLEAIETAIRIANVDPKKTIFFDDSAR 160 (224)
Q Consensus 133 P~~~~~~~al~~~~~~~~~~l~VgDs~~ 160 (224)
- -.=+.++|-++++|++|+=..+
T Consensus 272 H-----vKdls~LNRdl~kVivVd~d~~ 294 (393)
T KOG2832|consen 272 H-----VKDLSKLNRDLQKVIVVDFDAN 294 (393)
T ss_pred c-----hhhhhhhccccceeEEEEcccc
Confidence 0 1226788999999999986654
No 239
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=39.62 E-value=35 Score=30.74 Aligned_cols=39 Identities=13% Similarity=0.152 Sum_probs=32.1
Q ss_pred CChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccc
Q 027403 57 PDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDC 95 (224)
Q Consensus 57 ~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~ 95 (224)
.++.+.+.|++|+ ..++++|+++...+..+.+.+++.++
T Consensus 19 ~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p 60 (302)
T PRK12702 19 SYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEHP 60 (302)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCe
Confidence 4556777777776 77889999999999999999998753
No 240
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=39.15 E-value=1.2e+02 Score=27.03 Aligned_cols=85 Identities=14% Similarity=0.094 Sum_probs=48.9
Q ss_pred CeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHh-CCCC
Q 027403 71 RKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIA-NVDP 149 (224)
Q Consensus 71 ~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~-~~~~ 149 (224)
..+|+|+.........++.+++...++-.+.. + +.. ..+--..+...+.+.+ ...|
T Consensus 31 ~~~~~tg~h~~~~~~~~~~~~i~~~~~~~~~~-~-~~~---------------------~~~~~~~~~~~l~~~l~~~~p 87 (365)
T TIGR00236 31 SYVIVTAQHREMLDQVLDLFHLPPDYDLNIMS-P-GQT---------------------LGEITSNMLEGLEELLLEEKP 87 (365)
T ss_pred EEEEEeCCCHHHHHHHHHhcCCCCCeeeecCC-C-CCC---------------------HHHHHHHHHHHHHHHHHHcCC
Confidence 35699998888888888778875333222222 1 110 0021222222222222 2357
Q ss_pred CcEEEEeCChh---cHHHHHHcCCeEEEECCC
Q 027403 150 KKTIFFDDSAR---NIASAKAAGLHTVIVGSS 178 (224)
Q Consensus 150 ~~~l~VgDs~~---Di~~A~~~G~~~v~v~~~ 178 (224)
+=++..||... ...+|+..|++.+.+..|
T Consensus 88 Div~~~gd~~~~la~a~aa~~~~ipv~h~~~g 119 (365)
T TIGR00236 88 DIVLVQGDTTTTLAGALAAFYLQIPVGHVEAG 119 (365)
T ss_pred CEEEEeCCchHHHHHHHHHHHhCCCEEEEeCC
Confidence 88888899754 566778889998887544
No 241
>PRK06203 aroB 3-dehydroquinate synthase; Reviewed
Probab=38.82 E-value=3.2e+02 Score=25.28 Aligned_cols=47 Identities=15% Similarity=0.207 Sum_probs=32.9
Q ss_pred CCCHHHHHHHHHH---hCCC-CCcEEEEeCChh-cHHHHHHc----CCeEEEECCC
Q 027403 132 KPSLEAIETAIRI---ANVD-PKKTIFFDDSAR-NIASAKAA----GLHTVIVGSS 178 (224)
Q Consensus 132 KP~~~~~~~al~~---~~~~-~~~~l~VgDs~~-Di~~A~~~----G~~~v~v~~~ 178 (224)
||.++....+.+. .+.+ .+-++-||-+.. |+..+.++ |++.+.|++-
T Consensus 91 k~~~~~v~~i~~~~~~~~~dr~d~IIaiGGGsv~D~ak~iA~~~~rgip~I~IPTT 146 (389)
T PRK06203 91 KNDPALVEALHAAINRHGIDRHSYVLAIGGGAVLDMVGYAAATAHRGVRLIRIPTT 146 (389)
T ss_pred CCcHHHHHHHHHHHHHcCCCCCceEEEeCCcHHHHHHHHHHHHhcCCCCEEEEcCC
Confidence 8886656555544 4554 457889998874 99777753 8888988763
No 242
>cd08198 DHQS-like2 Dehydroquinate synthase (DHQS)-like. DHQS catalyzes the conversion of DAHP to DHQ in shikimate pathway for aromatic compounds synthesis. Dehydroquinate synthase-like proteins. Dehydroquinate synthase (DHQS) catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) to dehydroquinate (DHQ) in the second step of the shikimate pathway. This pathway involves seven sequential enzymatic steps in the conversion of erythrose 4-phosphate and phosphoenolpyruvate into chorismate for subsequent synthesis of aromatic compounds. The activity of DHQS requires NAD as cofactor. Proteins of this family share sequence similarity and functional motifs with that of dehydroquinate synthase, but the specific function has not been characterized.
Probab=38.21 E-value=3.3e+02 Score=25.17 Aligned_cols=47 Identities=17% Similarity=0.200 Sum_probs=33.2
Q ss_pred CCCHHHHHHHHH---HhCCCC-CcEEEEeCCh-hcHHHHHHc----CCeEEEECCC
Q 027403 132 KPSLEAIETAIR---IANVDP-KKTIFFDDSA-RNIASAKAA----GLHTVIVGSS 178 (224)
Q Consensus 132 KP~~~~~~~al~---~~~~~~-~~~l~VgDs~-~Di~~A~~~----G~~~v~v~~~ 178 (224)
||..+.+..+.+ +.+.++ +-++-+|=+. -|+..+.++ |++.|.|++-
T Consensus 79 k~~~~~v~~i~~~l~~~~~~r~~~IIalGGG~v~D~ag~vA~~~~rGip~I~IPTT 134 (369)
T cd08198 79 KNDPDLVEALHAAINRHGIDRHSYVIAIGGGAVLDAVGYAAATAHRGVRLIRIPTT 134 (369)
T ss_pred CChHHHHHHHHHHHHHcCCCcCcEEEEECChHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 777666655544 456553 4578888887 499887764 8999999754
No 243
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=37.21 E-value=2.1e+02 Score=23.30 Aligned_cols=104 Identities=20% Similarity=0.195 Sum_probs=61.6
Q ss_pred CCCCChhHHHHHhcCC--CCeEEEeCC--ChHHHHHHHHHcCCccccc-----eeEeeccCCCCCCCCCCCCCcccccCC
Q 027403 54 KLKPDPVLRNLLLSMP--QRKIIFTNA--DQKHAMEVLGRLGLEDCFE-----GIICFETINPRLQPADNTDGIENNSFS 124 (224)
Q Consensus 54 ~~~~~~g~~~~L~~l~--~~~~I~Tn~--~~~~~~~~l~~lgl~~~fd-----~ii~~~~~~~~~~~~~~~~~~~~~~~~ 124 (224)
.+...|++...++.|- +.++|+|.. .........+.+ .++|. .++.+..-+-
T Consensus 66 nL~V~p~aq~v~keLt~~y~vYivtaamdhp~s~~dK~eWl--~E~FPFi~~qn~vfCgnKni----------------- 126 (180)
T COG4502 66 NLGVQPFAQTVLKELTSIYNVYIVTAAMDHPKSCEDKGEWL--KEKFPFISYQNIVFCGNKNI----------------- 126 (180)
T ss_pred hcCccccHHHHHHHHHhhheEEEEEeccCCchhHHHHHHHH--HHHCCCCChhhEEEecCCCe-----------------
Confidence 4678889999999995 788888876 233333333332 22332 1333322111
Q ss_pred ccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCCCCCCceEeCCHhHHHHHHHHHH
Q 027403 125 SNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIW 202 (224)
Q Consensus 125 ~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~~~~d~~i~~~~dl~~~i~~~~ 202 (224)
+ +-=++|+|++.+++.-. |.+-.+-........--..+.+..|+.+.+.+-+
T Consensus 127 ----------------------v--kaDilIDDnp~nLE~F~--G~kIlFdA~HN~nenRF~Rv~~W~e~eq~ll~~~ 178 (180)
T COG4502 127 ----------------------V--KADILIDDNPLNLENFK--GNKILFDAHHNKNENRFVRVRDWYEAEQALLESL 178 (180)
T ss_pred ----------------------E--EeeEEecCCchhhhhcc--CceEEEecccccCccceeeeccHHHHHHHHHHhh
Confidence 1 11288999999998764 5554444433334445567889999886665433
No 244
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=37.12 E-value=55 Score=28.46 Aligned_cols=61 Identities=15% Similarity=0.271 Sum_probs=42.5
Q ss_pred HHHHHHHHHHhCCCCCcEEEEeCCh-----hcHHHHHHcCCeEEEECCCCCCCCCceEeCCHhHHHHHHH
Q 027403 135 LEAIETAIRIANVDPKKTIFFDDSA-----RNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIP 199 (224)
Q Consensus 135 ~~~~~~al~~~~~~~~~~l~VgDs~-----~Di~~A~~~G~~~v~v~~~~~~~~~d~~i~~~~dl~~~i~ 199 (224)
.+.=...+++.+++ +++.=||- .=+.+|+..|++.+.|.+|... .....+.++.++.+.+.
T Consensus 183 ~e~n~al~~~~~i~---~lVtK~SG~~g~~eKi~AA~~lgi~vivI~RP~~~-~~~~~~~~~~e~l~~l~ 248 (249)
T PF02571_consen 183 KELNRALFRQYGID---VLVTKESGGSGFDEKIEAARELGIPVIVIKRPPEP-YGDPVVETIEELLDWLE 248 (249)
T ss_pred HHHHHHHHHHcCCC---EEEEcCCCchhhHHHHHHHHHcCCeEEEEeCCCCC-CCCcccCCHHHHHHHHh
Confidence 34445667777764 55555552 2489999999999999998633 34444788888887764
No 245
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=36.20 E-value=73 Score=28.86 Aligned_cols=83 Identities=11% Similarity=0.101 Sum_probs=47.5
Q ss_pred eEEEeCCC--hHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHh-CCC
Q 027403 72 KIIFTNAD--QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIA-NVD 148 (224)
Q Consensus 72 ~~I~Tn~~--~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~-~~~ 148 (224)
.+|+|+.. ..+-..+++.+++ ...+..+..+.... ++--..+...+-+.+ ..+
T Consensus 12 ~li~tG~H~~~~~g~~~~~~f~i-~~~~~~l~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~ 67 (346)
T PF02350_consen 12 ILIVTGQHLDPEMGDTFFEGFGI-PKPDYLLDSDSQSM-----------------------AKSTGLAIIELADVLEREK 67 (346)
T ss_dssp EEEEECSS--CHHHHHHHHHTT---SEEEE--STTS-H-----------------------HHHHHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCCCHHHHHHHHhhCCC-CCCCcccccccchH-----------------------HHHHHHHHHHHHHHHHhcC
Confidence 56899987 6777888888887 55665554333111 122222222222222 137
Q ss_pred CCcEEEEeCChh---cHHHHHHcCCeEEEECCC
Q 027403 149 PKKTIFFDDSAR---NIASAKAAGLHTVIVGSS 178 (224)
Q Consensus 149 ~~~~l~VgDs~~---Di~~A~~~G~~~v~v~~~ 178 (224)
|+-+++.||+.. -..+|...+++.+.+..|
T Consensus 68 Pd~Vlv~GD~~~~la~alaA~~~~ipv~HieaG 100 (346)
T PF02350_consen 68 PDAVLVLGDRNEALAAALAAFYLNIPVAHIEAG 100 (346)
T ss_dssp -SEEEEETTSHHHHHHHHHHHHTT-EEEEES--
T ss_pred CCEEEEEcCCchHHHHHHHHHHhCCCEEEecCC
Confidence 999999999974 667788889999999887
No 246
>PHA02575 1 deoxynucleoside monophosphate kinase; Provisional
Probab=36.11 E-value=2.4e+02 Score=24.38 Aligned_cols=55 Identities=15% Similarity=0.270 Sum_probs=39.7
Q ss_pred CCCcEEEEeCC--hhcHHHHHHcCCeEEEECCCCC------------CCCCceEeCC---HhHHHHHHHHHH
Q 027403 148 DPKKTIFFDDS--ARNIASAKAAGLHTVIVGSSVP------------VPPADHALNS---IHNIKEAIPEIW 202 (224)
Q Consensus 148 ~~~~~l~VgDs--~~Di~~A~~~G~~~v~v~~~~~------------~~~~d~~i~~---~~dl~~~i~~~~ 202 (224)
++...++|-|- .++++..++.|...+.+.++.. ....|+++.| +.+|.+.|.+++
T Consensus 154 ~~~~~vVVTDVRf~nEie~lre~Gg~iV~V~R~~~~vd~H~SE~gLd~~~~D~vI~NdGtleeL~~qV~~ll 225 (227)
T PHA02575 154 SDYDYFIVTDVRQDHEMELVRAMGATVIHVVRDTGLVDTHSTEAGLPIQPGDIVITNNGTLEELKSKILNLI 225 (227)
T ss_pred ccCCCEEEeCCCChhHHHHHHHcCCEEEEEecCCCCccCCCCccCCCCCCCCEEEEcCCCHHHHHHHHHHHh
Confidence 45668999998 4899999999998888876532 2346787766 566665555554
No 247
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=35.59 E-value=1.7e+02 Score=25.69 Aligned_cols=91 Identities=13% Similarity=0.066 Sum_probs=48.8
Q ss_pred hhHHHHHhcCC-CCeEEEeCCChH---HHHHHHHHcCCc----cccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403 59 PVLRNLLLSMP-QRKIIFTNADQK---HAMEVLGRLGLE----DCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 130 (224)
Q Consensus 59 ~g~~~~L~~l~-~~~~I~Tn~~~~---~~~~~l~~lgl~----~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (224)
|-....|+.++ +...|++-++.. .....|...|+. .-|-.++.+++...
T Consensus 137 pre~aaLa~~rEyseti~~rs~d~~~~~~~~~L~e~glt~v~garf~~v~~as~gKg----------------------- 193 (274)
T COG3769 137 PREQAALAMLREYSETIIWRSSDERMAQFTARLNERGLTFVHGARFWHVLDASAGKG----------------------- 193 (274)
T ss_pred ChHHhHHHHHHHhhhheeecccchHHHHHHHHHHhcCceEEeccceEEEeccccCcc-----------------------
Confidence 34455666666 555566655433 345566666763 12333444444221
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEEC
Q 027403 131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG 176 (224)
Q Consensus 131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~ 176 (224)
| ........-++++.. +-++-+|||+||+-.- ..+..++.|.
T Consensus 194 -~-Aa~~ll~~y~rl~~~-r~t~~~GDg~nD~Pl~-ev~d~AfiV~ 235 (274)
T COG3769 194 -Q-AANWLLETYRRLGGA-RTTLGLGDGPNDAPLL-EVMDYAFIVK 235 (274)
T ss_pred -H-HHHHHHHHHHhcCce-eEEEecCCCCCcccHH-Hhhhhheeec
Confidence 2 223333344444432 2589999999997654 4455555554
No 248
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=35.08 E-value=3.9e+02 Score=25.19 Aligned_cols=107 Identities=13% Similarity=0.119 Sum_probs=68.3
Q ss_pred hhHHHHHhcCC-CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHH
Q 027403 59 PVLRNLLLSMP-QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEA 137 (224)
Q Consensus 59 ~g~~~~L~~l~-~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~ 137 (224)
+-+...+..+. ..-+++.++-...+-..+.. +.+..+.|++.++.. .....+
T Consensus 80 ~~le~~iaal~ga~~~l~fsSGmaA~~~al~~--L~~~g~~iV~~~~~Y-------------------------~gT~~~ 132 (409)
T KOG0053|consen 80 DVLESGIAALEGAAHALLFSSGMAAITVALLH--LLPAGDHIVATGDVY-------------------------GGTLRI 132 (409)
T ss_pred HHHHHHHHHHhCCceEEEecccHHHHHHHHHH--hcCCCCcEEEeCCCc-------------------------ccHHHH
Confidence 34555666665 34344444433223333332 446788899988664 557888
Q ss_pred HHHHHHHhCCCCCcEEEEe-CChhcHHHHHHcCCeEEEECCCCCCCCCceEeCCHhHHHHHH
Q 027403 138 IETAIRIANVDPKKTIFFD-DSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAI 198 (224)
Q Consensus 138 ~~~al~~~~~~~~~~l~Vg-Ds~~Di~~A~~~G~~~v~v~~~~~~~~~d~~i~~~~dl~~~i 198 (224)
+.....++|+. +-+|+ |-..+++.|.+-....||+.++ .+|...+.|+..+.++.
T Consensus 133 l~~~~~~~gie---~~~vd~~~~~~~~~~i~~~t~~V~~ESP---sNPll~v~DI~~l~~la 188 (409)
T KOG0053|consen 133 LRKFLPKFGGE---GDFVDVDDLKKILKAIKENTKAVFLESP---SNPLLKVPDIEKLARLA 188 (409)
T ss_pred HHHHHHHhCce---eeeechhhHHHHHHhhccCceEEEEECC---CCCccccccHHHHHHHH
Confidence 88888888864 44555 4456899998888899999886 34555666666666544
No 249
>PRK13790 phosphoribosylamine--glycine ligase; Provisional
Probab=34.64 E-value=3.6e+02 Score=24.59 Aligned_cols=71 Identities=10% Similarity=0.071 Sum_probs=45.8
Q ss_pred CHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCCCCCCceEeCCHhHHHHHHHHHHhh
Q 027403 134 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEG 204 (224)
Q Consensus 134 ~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~~~~d~~i~~~~dl~~~i~~~~~~ 204 (224)
++......++++|++--....+.|...-...+...|.+.|.=+.+.....--.++.+..++.+.+..++..
T Consensus 67 dK~~~k~~l~~~gIptp~~~~~~~~~ea~~~~~~~g~PvVvKp~~~~~gkGV~iv~~~~el~~a~~~~~~~ 137 (379)
T PRK13790 67 SKLFAKKIMEKYNIPTADYKEVERKKDALTYIENCELPVVVKKDGLAAGKGVIIADTIEAARSAIEIMYGD 137 (379)
T ss_pred CHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHhcCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHhc
Confidence 66777789999999755555555433233444567877553333322223346789999999999988743
No 250
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=33.63 E-value=1.3e+02 Score=24.21 Aligned_cols=25 Identities=20% Similarity=0.296 Sum_probs=20.1
Q ss_pred EEEeCChhcHHHHHHcCCeEEEECCC
Q 027403 153 IFFDDSARNIASAKAAGLHTVIVGSS 178 (224)
Q Consensus 153 l~VgDs~~Di~~A~~~G~~~v~v~~~ 178 (224)
++||++.. ...|++.|++++.+..+
T Consensus 128 viVGg~~~-~~~A~~~gl~~v~i~sg 152 (176)
T PF06506_consen 128 VIVGGGVV-CRLARKLGLPGVLIESG 152 (176)
T ss_dssp EEEESHHH-HHHHHHTTSEEEESS--
T ss_pred EEECCHHH-HHHHHHcCCcEEEEEec
Confidence 88999975 68889999999998664
No 251
>TIGR01369 CPSaseII_lrg carbamoyl-phosphate synthase, large subunit. In several thermophilic species (Methanobacterium thermoautotrophicum, Methanococcus jannaschii, Aquifex aeolicus), the large subunit appears split, at different points, into two separate genes.
Probab=33.58 E-value=4.5e+02 Score=27.71 Aligned_cols=72 Identities=13% Similarity=0.024 Sum_probs=47.7
Q ss_pred CHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCCCCCCceEeCCHhHHHHHHHHHHhhc
Q 027403 134 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEGE 205 (224)
Q Consensus 134 ~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~~~~d~~i~~~~dl~~~i~~~~~~~ 205 (224)
++..+...++++|++--+...+.|...-...+...|.+.+.=+........-.++.+..+|.+.+.+.+...
T Consensus 669 DK~~f~~lL~~~GIp~P~~~~v~s~ee~~~~~~~igyPvIVKP~~~~Gg~gv~iv~~~eeL~~~l~~a~~~s 740 (1050)
T TIGR01369 669 DREKFSELLDELGIPQPKWKTATSVEEAVEFASEIGYPVLVRPSYVLGGRAMEIVYNEEELRRYLEEAVEVS 740 (1050)
T ss_pred CHHHHHHHHHHCCcCCCCeEEECCHHHHHHHHHhcCCCEEEEECCCCCCCCeEEECCHHHHHHHHHHHHHhC
Confidence 566678899999997666666655332234467788875433322222234467899999999999887653
No 252
>PRK14021 bifunctional shikimate kinase/3-dehydroquinate synthase; Provisional
Probab=33.11 E-value=3.5e+02 Score=26.15 Aligned_cols=35 Identities=14% Similarity=0.131 Sum_probs=25.8
Q ss_pred HHhCCC-CCcEEEEeCCh-hcHHHHHH----cCCeEEEECC
Q 027403 143 RIANVD-PKKTIFFDDSA-RNIASAKA----AGLHTVIVGS 177 (224)
Q Consensus 143 ~~~~~~-~~~~l~VgDs~-~Di~~A~~----~G~~~v~v~~ 177 (224)
.+.+.+ .+-++-||-+. .|+..+.+ .|++.|.|++
T Consensus 263 ~~~~~~r~D~IIAIGGGsv~D~AKfvA~~y~rGi~~i~vPT 303 (542)
T PRK14021 263 GNEGFTRSDAIVGLGGGAATDLAGFVAATWMRGIRYVNCPT 303 (542)
T ss_pred HhcCCCCCcEEEEEcChHHHHHHHHHHHHHHcCCCEEEeCC
Confidence 344543 45566699976 59988887 4999999987
No 253
>KOG0538 consensus Glycolate oxidase [Energy production and conversion]
Probab=32.63 E-value=2.1e+02 Score=26.19 Aligned_cols=64 Identities=20% Similarity=0.353 Sum_probs=40.9
Q ss_pred cceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCCh---hcHHHHHHcCCeE
Q 027403 96 FEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA---RNIASAKAAGLHT 172 (224)
Q Consensus 96 fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~---~Di~~A~~~G~~~ 172 (224)
.++||-|.+.++. -|+ .--..+++..+.+..+= +=-+|++-++ +|+.-|.+.|+++
T Consensus 245 ~~GIIVSNHGgRQ------lD~-------------vpAtI~~L~Evv~aV~~--ri~V~lDGGVR~G~DVlKALALGAk~ 303 (363)
T KOG0538|consen 245 VAGIIVSNHGGRQ------LDY-------------VPATIEALPEVVKAVEG--RIPVFLDGGVRRGTDVLKALALGAKG 303 (363)
T ss_pred CceEEEeCCCccc------cCc-------------ccchHHHHHHHHHHhcC--ceEEEEecCcccchHHHHHHhcccce
Confidence 5788888776653 111 11234455555555542 2235555555 5999999999999
Q ss_pred EEECCCCC
Q 027403 173 VIVGSSVP 180 (224)
Q Consensus 173 v~v~~~~~ 180 (224)
|++++|.-
T Consensus 304 VfiGRP~v 311 (363)
T KOG0538|consen 304 VFIGRPIV 311 (363)
T ss_pred EEecCchh
Confidence 99999864
No 254
>PRK11197 lldD L-lactate dehydrogenase; Provisional
Probab=31.95 E-value=1.9e+02 Score=26.96 Aligned_cols=136 Identities=18% Similarity=0.155 Sum_probs=75.8
Q ss_pred CChhHHHHHhcCCCCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHH
Q 027403 57 PDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLE 136 (224)
Q Consensus 57 ~~~g~~~~L~~l~~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~ 136 (224)
-|.++..+-+..+.++++=.=.+.+.+.... .+| .|.|+.+...++. .++ .-|...
T Consensus 233 tW~di~~lr~~~~~pvivKgV~s~~dA~~a~-~~G----vd~I~Vs~hGGr~------~d~-------------~~~t~~ 288 (381)
T PRK11197 233 SWKDLEWIRDFWDGPMVIKGILDPEDARDAV-RFG----ADGIVVSNHGGRQ------LDG-------------VLSSAR 288 (381)
T ss_pred CHHHHHHHHHhCCCCEEEEecCCHHHHHHHH-hCC----CCEEEECCCCCCC------CCC-------------cccHHH
Confidence 3455666666666665543334555555444 457 6777666654432 011 122334
Q ss_pred HHHHHHHHhCCCCCcEEEEeCCh---hcHHHHHHcCCeEEEECCCCC----CCCCceEeCCHhHHHHHHHHHHhhcCcch
Q 027403 137 AIETAIRIANVDPKKTIFFDDSA---RNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNIKEAIPEIWEGEGEQL 209 (224)
Q Consensus 137 ~~~~al~~~~~~~~~~l~VgDs~---~Di~~A~~~G~~~v~v~~~~~----~~~~d~~i~~~~dl~~~i~~~~~~~~~~~ 209 (224)
....+.+..+ .+--++++-+. .||..|...|+++|+++++.- ..+.+.+.+-+..+.+-+...+-.-|-..
T Consensus 289 ~L~~i~~a~~--~~~~vi~dGGIr~g~Di~KALaLGA~~V~iGr~~l~~la~~G~~gv~~~l~~l~~El~~~m~l~G~~~ 366 (381)
T PRK11197 289 ALPAIADAVK--GDITILADSGIRNGLDVVRMIALGADTVLLGRAFVYALAAAGQAGVANLLDLIEKEMRVAMTLTGAKS 366 (381)
T ss_pred HHHHHHHHhc--CCCeEEeeCCcCcHHHHHHHHHcCcCceeEhHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 4444444443 12224444444 399999999999999988743 34556666667777777776666655544
Q ss_pred hhhhchhhH
Q 027403 210 EQVIQPAAV 218 (224)
Q Consensus 210 ~~~~~~~~~ 218 (224)
=..+++..+
T Consensus 367 i~el~~~~l 375 (381)
T PRK11197 367 ISEITRDSL 375 (381)
T ss_pred HHHhCHhhh
Confidence 444444433
No 255
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=31.85 E-value=2.7e+02 Score=24.68 Aligned_cols=34 Identities=26% Similarity=0.417 Sum_probs=27.8
Q ss_pred HHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCC
Q 027403 141 AIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS 178 (224)
Q Consensus 141 al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~ 178 (224)
.++.++++ +|..-...|++.|.++|+.+..+-..
T Consensus 78 Yl~af~v~----LFLSan~~DV~~Ai~~G~~Aa~v~~~ 111 (264)
T PF06189_consen 78 YLKAFNVD----LFLSANEDDVQEAIDAGIPAATVLPS 111 (264)
T ss_pred HHHHhCCc----eEeeCCHHHHHHHHHcCCCcEEeecC
Confidence 35567776 99999999999999999998877443
No 256
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=31.65 E-value=5.7 Score=35.04 Aligned_cols=90 Identities=14% Similarity=0.165 Sum_probs=57.2
Q ss_pred CCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCC-ccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403 56 KPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGL-EDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 132 (224)
Q Consensus 56 ~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl-~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K 132 (224)
...|++.++|.+.. +.+++.|.+-......+++.|.- ...|....--+. |.+
T Consensus 131 ~kRP~vdeFL~~~s~~~e~v~FTAs~~~Ya~~v~D~LD~~~~i~~~RlyR~~-----------------C~~-------- 185 (262)
T KOG1605|consen 131 RKRPHVDEFLSRVSKWYELVLFTASLEVYADPLLDILDPDRKIISHRLYRDS-----------------CTL-------- 185 (262)
T ss_pred EcCCCHHHHHHHhHHHHHHHHHHhhhHHHHHHHHHHccCCCCeeeeeecccc-----------------eEe--------
Confidence 45689999999997 78999999999999999988664 333333221111 111
Q ss_pred CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCe
Q 027403 133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLH 171 (224)
Q Consensus 133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~ 171 (224)
....|..-+...+.+..++++|+|++.-...=-..|++
T Consensus 186 -~~g~yvKdls~~~~dL~~viIiDNsP~sy~~~p~NgIp 223 (262)
T KOG1605|consen 186 -KDGNYVKDLSVLGRDLSKVIIVDNSPQSYRLQPENGIP 223 (262)
T ss_pred -ECCcEEEEcceeccCcccEEEEcCChHHhccCccCCCc
Confidence 11111112245666888999999999754444444554
No 257
>PLN02580 trehalose-phosphatase
Probab=31.38 E-value=60 Score=30.24 Aligned_cols=38 Identities=11% Similarity=0.218 Sum_probs=31.2
Q ss_pred CCCCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHc
Q 027403 53 EKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRL 90 (224)
Q Consensus 53 ~~~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~l 90 (224)
....+.++++++|++|. .+++|+|+++...+...+.-.
T Consensus 138 d~A~~s~~~~~aL~~La~~~~VAIVSGR~~~~L~~~l~~~ 177 (384)
T PLN02580 138 DRALMSDAMRSAVKNVAKYFPTAIISGRSRDKVYELVGLT 177 (384)
T ss_pred ccccCCHHHHHHHHHHhhCCCEEEEeCCCHHHHHHHhCCC
Confidence 34567789999999996 679999999999888877543
No 258
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=31.24 E-value=66 Score=30.11 Aligned_cols=45 Identities=18% Similarity=0.161 Sum_probs=30.3
Q ss_pred CHHHHHHHHHHh----CCCCCcEEEEeCChh----cHHHHHHcCCeEEEECCCC
Q 027403 134 SLEAIETAIRIA----NVDPKKTIFFDDSAR----NIASAKAAGLHTVIVGSSV 179 (224)
Q Consensus 134 ~~~~~~~al~~~----~~~~~~~l~VgDs~~----Di~~A~~~G~~~v~v~~~~ 179 (224)
+......+.+-+ ++.|.+|++|||... +=-.|+.+|. ++||.+|.
T Consensus 350 Ks~GV~~lQ~y~~~~~~i~~~~tLHVGDQF~s~GaNDfkaR~a~~-t~WIasP~ 402 (408)
T PF06437_consen 350 KSLGVRALQKYFDPEGGIKPSETLHVGDQFLSAGANDFKARLACT-TAWIASPQ 402 (408)
T ss_pred cHHhHHHHHHHHHhccCCCccceeeehhhhhccCCcchhhhhhce-eeEecCHH
Confidence 334445555555 799999999999741 3345555554 79998874
No 259
>cd04736 MDH_FMN Mandelate dehydrogenase (MDH)-like FMN-binding domain. MDH is part of a widespread family of homologous FMN-dependent a-hydroxy acid oxidizing enzymes that oxidizes (S)-mandelate to phenylglyoxalate. MDH is an enzyme in the mandelate pathway that occurs in several strains of Pseudomonas which converts (R)-mandelate to benzoate. This family occurs in both prokaryotes and eukaryotes. Members of this family include flavocytochrome b2 (FCB2), glycolate oxidase (GOX), lactate monooxygenase (LMO), mandelate dehydrogenase (MDH), and long chain hydroxyacid oxidase (LCHAO).
Probab=30.68 E-value=3.7e+02 Score=24.80 Aligned_cols=119 Identities=18% Similarity=0.213 Sum_probs=67.2
Q ss_pred ChhHHHHHhcCCCCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHH
Q 027403 58 DPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEA 137 (224)
Q Consensus 58 ~~g~~~~L~~l~~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~ 137 (224)
+..+..+-+.++.++++-.-.+.+.+....+ +| .|.|+.+...++. .|+ .-|....
T Consensus 225 w~~i~~ir~~~~~pviiKgV~~~eda~~a~~-~G----~d~I~VSnhGGrq------ld~-------------~~~~~~~ 280 (361)
T cd04736 225 WQDLRWLRDLWPHKLLVKGIVTAEDAKRCIE-LG----ADGVILSNHGGRQ------LDD-------------AIAPIEA 280 (361)
T ss_pred HHHHHHHHHhCCCCEEEecCCCHHHHHHHHH-CC----cCEEEECCCCcCC------CcC-------------CccHHHH
Confidence 4555555566666666544345555554444 57 6777776655542 011 1233555
Q ss_pred HHHHHHHhCCCCCcEEEEeCCh---hcHHHHHHcCCeEEEECCCCC----CCCCceEeCCHhHHHHHHHHHHhh
Q 027403 138 IETAIRIANVDPKKTIFFDDSA---RNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNIKEAIPEIWEG 204 (224)
Q Consensus 138 ~~~al~~~~~~~~~~l~VgDs~---~Di~~A~~~G~~~v~v~~~~~----~~~~d~~i~~~~dl~~~i~~~~~~ 204 (224)
+..+.+..++ -++++-+. .||.-|..+|+++|.++++.- ..+.+.+.+-++.|.+-+...+-.
T Consensus 281 L~ei~~~~~~----~vi~dGGIr~g~Dv~KALaLGA~aV~iGr~~l~~la~~G~~gv~~~l~~l~~el~~~m~l 350 (361)
T cd04736 281 LAEIVAATYK----PVLIDSGIRRGSDIVKALALGANAVLLGRATLYGLAARGEAGVSEVLRLLKEEIDRTLAL 350 (361)
T ss_pred HHHHHHHhCC----eEEEeCCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 5555555442 24444444 399999999999999988753 234444444455555555444433
No 260
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=29.77 E-value=2.2e+02 Score=29.09 Aligned_cols=37 Identities=14% Similarity=0.263 Sum_probs=30.4
Q ss_pred CCCChhHHHHHhcCC----CCeEEEeCCChHHHHHHHHHcC
Q 027403 55 LKPDPVLRNLLLSMP----QRKIIFTNADQKHAMEVLGRLG 91 (224)
Q Consensus 55 ~~~~~g~~~~L~~l~----~~~~I~Tn~~~~~~~~~l~~lg 91 (224)
..+.|++.++|++|. ..++|+|+++...+...+...+
T Consensus 531 a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~ 571 (797)
T PLN03063 531 LGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEYN 571 (797)
T ss_pred CCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCCC
Confidence 346789999999994 5688999999999999987644
No 261
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=29.74 E-value=74 Score=27.59 Aligned_cols=39 Identities=26% Similarity=0.284 Sum_probs=28.0
Q ss_pred CCCChhHHHHHhcCC-C--CeEEEeCCChH---HHHHHHHHcCCc
Q 027403 55 LKPDPVLRNLLLSMP-Q--RKIIFTNADQK---HAMEVLGRLGLE 93 (224)
Q Consensus 55 ~~~~~g~~~~L~~l~-~--~~~I~Tn~~~~---~~~~~l~~lgl~ 93 (224)
..+.||+.++|++|+ . ++=.+||...+ .+...|.++|+.
T Consensus 22 ~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 22 DAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred cccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 348899999999998 3 33389997654 455566677753
No 262
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=29.57 E-value=3.3e+02 Score=23.89 Aligned_cols=103 Identities=10% Similarity=0.049 Sum_probs=57.0
Q ss_pred hhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCH
Q 027403 59 PVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSL 135 (224)
Q Consensus 59 ~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~ 135 (224)
..+++.+...- ..-+++||+....+...+.. +.. +.++.. -|.-
T Consensus 43 ~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~~--~~~--~~vv~~-----------------------------~P~y 89 (332)
T PRK06425 43 TDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLSY--INV--GNIIIV-----------------------------EPNF 89 (332)
T ss_pred HHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHH--hCC--CcEEEe-----------------------------CCCh
Confidence 44555555442 33578999988877766643 222 223321 4566
Q ss_pred HHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCCCCCCceEeCCHhHHHHHH
Q 027403 136 EAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAI 198 (224)
Q Consensus 136 ~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~~~~d~~i~~~~dl~~~i 198 (224)
..|..+++..|.+...+=+ ++...|....++.+.+.+++.++....+. +-+..++.+++
T Consensus 90 ~~y~~~~~~~G~~v~~vp~-~~~~~~~~~l~~~~~k~v~l~nP~NPTG~---~~s~~~~~~l~ 148 (332)
T PRK06425 90 NEYKGYAFTHGIRISALPF-NLINNNPEILNNYNFDLIFIVSPDNPLGN---LISRDSLLTIS 148 (332)
T ss_pred HHHHHHHHHcCCeEEEEeC-CcccCcHHHHhhcCCCEEEEeCCCCCcCC---ccCHHHHHHHH
Confidence 7788889999865433221 12122444444457788888876543333 33444444433
No 263
>PRK08354 putative aminotransferase; Provisional
Probab=29.18 E-value=2.8e+02 Score=24.10 Aligned_cols=102 Identities=10% Similarity=-0.009 Sum_probs=60.0
Q ss_pred ChhHHHHHhcCCCCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHH
Q 027403 58 DPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEA 137 (224)
Q Consensus 58 ~~g~~~~L~~l~~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~ 137 (224)
.+++++.+.+.-..-+++||+..+.+...+..+. . =|.|+. ..|.-..
T Consensus 42 ~~~l~~~ia~~~~~~I~vt~G~~~al~~~~~~~~-~--gd~vlv-----------------------------~~P~y~~ 89 (311)
T PRK08354 42 YEWLEEEFSKLFGEPIVITAGITEALYLIGILAL-R--DRKVII-----------------------------PRHTYGE 89 (311)
T ss_pred hHHHHHHHHHHHCCCEEECCCHHHHHHHHHHhhC-C--CCeEEE-----------------------------eCCCcHH
Confidence 4556666665543457899988876655543322 1 133321 2677778
Q ss_pred HHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCCCCCCceEeCCHhHHHHHH
Q 027403 138 IETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAI 198 (224)
Q Consensus 138 ~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~~~~d~~i~~~~dl~~~i 198 (224)
|..+++.+|.+. +.++.....+..+.. +-+.+++.+|.. +.-.+-+.+++.+++
T Consensus 90 ~~~~~~~~g~~~---~~~~~d~~~l~~~~~-~~~~vi~~~P~N---PTG~~~~~~~l~~l~ 143 (311)
T PRK08354 90 YERVARFFAARI---IKGPNDPEKLEELVE-RNSVVFFCNPNN---PDGKFYNFKELKPLL 143 (311)
T ss_pred HHHHHHHcCCEE---eecCCCHHHHHHhhc-CCCEEEEecCCC---CCCCccCHHHHHHHH
Confidence 888999988654 455666666766544 445677777753 444444555555443
No 264
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=29.08 E-value=3e+02 Score=25.08 Aligned_cols=95 Identities=11% Similarity=0.112 Sum_probs=58.7
Q ss_pred CeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCC
Q 027403 71 RKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPK 150 (224)
Q Consensus 71 ~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~ 150 (224)
..++++|++.+.+..+...+.-.. |.++.. -|.-..|...++..|....
T Consensus 76 ~~V~~gnGsde~i~~l~~~~~~~g--d~vl~~-----------------------------~Ptf~~Y~~~a~~~g~~~~ 124 (356)
T COG0079 76 ENVLVGNGSDELIELLVRAFVEPG--DTVLIP-----------------------------EPTFSMYEIAAQLAGAEVV 124 (356)
T ss_pred ceEEEcCChHHHHHHHHHHhhcCC--CEEEEc-----------------------------CCChHHHHHHHHhcCCeEE
Confidence 477889999887777776644332 444422 5677889999999996655
Q ss_pred cEEEEe--CChhcHHHHHHcCCeEEEECCCCCCCCCceEeCCHhHHHHHHH
Q 027403 151 KTIFFD--DSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIP 199 (224)
Q Consensus 151 ~~l~Vg--Ds~~Di~~A~~~G~~~v~v~~~~~~~~~d~~i~~~~dl~~~i~ 199 (224)
.+-..+ .....+..+..-..+.+++.+|+...+ ..-+..+|..++.
T Consensus 125 ~v~~~~~~~d~~~~~~~~~~~~~lv~i~nPNNPTG---~~~~~~~l~~l~~ 172 (356)
T COG0079 125 KVPLKEFRLDLDAILAAIRDKTKLVFLCNPNNPTG---TLLPREELRALLE 172 (356)
T ss_pred EecccccccCHHHHHHhhhcCCCEEEEeCCCCCCC---CCCCHHHHHHHHH
Confidence 444433 222334444444678899998864333 3335555555443
No 265
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=28.94 E-value=96 Score=24.11 Aligned_cols=45 Identities=11% Similarity=0.134 Sum_probs=32.1
Q ss_pred CCCChhHHHHHhcCC---CCeEEEeCCChH---------------HHHHHHHHcCCccccceeEe
Q 027403 55 LKPDPVLRNLLLSMP---QRKIIFTNADQK---------------HAMEVLGRLGLEDCFEGIIC 101 (224)
Q Consensus 55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~~---------------~~~~~l~~lgl~~~fd~ii~ 101 (224)
..+.+++.+.|+.++ ..++++|+++.. .+...|++.++. +|.++.
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ip--Yd~l~~ 85 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNVP--YDEIYV 85 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCCC--CceEEe
Confidence 357789999998763 678899998764 456677777764 565543
No 266
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=28.86 E-value=2.2e+02 Score=27.56 Aligned_cols=33 Identities=24% Similarity=0.297 Sum_probs=24.9
Q ss_pred HHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCC
Q 027403 141 AIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS 178 (224)
Q Consensus 141 al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~ 178 (224)
-+++.|++ ++|||... ...|+++|++.+.+.++
T Consensus 140 ~l~~~G~~----~viG~~~~-~~~A~~~gl~~ili~s~ 172 (526)
T TIGR02329 140 DLRARGIG----AVVGAGLI-TDLAEQAGLHGVFLYSA 172 (526)
T ss_pred HHHHCCCC----EEECChHH-HHHHHHcCCceEEEecH
Confidence 34445654 88899965 67789999999999764
No 267
>PRK09423 gldA glycerol dehydrogenase; Provisional
Probab=28.23 E-value=4.5e+02 Score=23.76 Aligned_cols=46 Identities=26% Similarity=0.209 Sum_probs=33.3
Q ss_pred CCCHHHHHHHHHHhC-CCCCcEEEEeCCh-hcHHHHHHc--CCeEEEECC
Q 027403 132 KPSLEAIETAIRIAN-VDPKKTIFFDDSA-RNIASAKAA--GLHTVIVGS 177 (224)
Q Consensus 132 KP~~~~~~~al~~~~-~~~~~~l~VgDs~-~Di~~A~~~--G~~~v~v~~ 177 (224)
.|.....+.+++.+. ..++-++-||=+. .|+..+.+. |++.+.|++
T Consensus 67 ep~~~~v~~~~~~~~~~~~d~IIavGGGsv~D~aK~iA~~~~~p~i~IPT 116 (366)
T PRK09423 67 ECSDNEIDRLVAIAEENGCDVVIGIGGGKTLDTAKAVADYLGVPVVIVPT 116 (366)
T ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecChHHHHHHHHHHHHcCCCEEEeCC
Confidence 566666666666653 3578899999886 598776654 888888865
No 268
>COG2241 CobL Precorrin-6B methylase 1 [Coenzyme metabolism]
Probab=27.89 E-value=3.1e+02 Score=23.37 Aligned_cols=46 Identities=13% Similarity=0.101 Sum_probs=34.9
Q ss_pred CCCHHHHHHHHHHhCCCCCcEEEEeCC---hhcHHHHHHcCCeEEEECC
Q 027403 132 KPSLEAIETAIRIANVDPKKTIFFDDS---ARNIASAKAAGLHTVIVGS 177 (224)
Q Consensus 132 KP~~~~~~~al~~~~~~~~~~l~VgDs---~~Di~~A~~~G~~~v~v~~ 177 (224)
-|.+.+++.++.++|++-+++.+|.=+ ...+......|-+.+....
T Consensus 100 IPgiSS~q~a~ARlg~~~~~~~~islHgr~~~~l~~~~~~~~~~vil~~ 148 (210)
T COG2241 100 IPGISSVQLAAARLGWPLQDTEVISLHGRPVELLRPLLENGRRLVILTP 148 (210)
T ss_pred ecChhHHHHHHHHhCCChHHeEEEEecCCCHHHHHHHHhCCceEEEeCC
Confidence 789999999999999999887777555 4567777755665555543
No 269
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=27.39 E-value=2.2e+02 Score=30.27 Aligned_cols=78 Identities=17% Similarity=0.196 Sum_probs=51.2
Q ss_pred hHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcE-EEEeCC
Q 027403 80 QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKT-IFFDDS 158 (224)
Q Consensus 80 ~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~-l~VgDs 158 (224)
...++..|...|+... .|+|.. .. +=...+..-.+..+...+..+.|++.+++ +|+|||
T Consensus 923 v~elr~~Lr~~gLr~~--~iys~~-~~-----------------~LDVlP~~ASKgqAlRyL~~rwgi~l~~v~VfaGdS 982 (1050)
T TIGR02468 923 VKELRKLLRIQGLRCH--AVYCRN-GT-----------------RLNVIPLLASRSQALRYLFVRWGIELANMAVFVGES 982 (1050)
T ss_pred HHHHHHHHHhCCCceE--EEeecC-Cc-----------------EeeeeeCCCCHHHHHHHHHHHcCCChHHeEEEeccC
Confidence 3678888888887633 233332 00 00122234668899999999999999998 669999
Q ss_pred hh-cHHHHHHcCCeEEEECCC
Q 027403 159 AR-NIASAKAAGLHTVIVGSS 178 (224)
Q Consensus 159 ~~-Di~~A~~~G~~~v~v~~~ 178 (224)
.+ |+..-. .|.+.-.|..|
T Consensus 983 GntD~e~Ll-~G~~~tvi~~g 1002 (1050)
T TIGR02468 983 GDTDYEGLL-GGLHKTVILKG 1002 (1050)
T ss_pred CCCCHHHHh-CCceeEEEEec
Confidence 99 987763 35655444333
No 270
>CHL00162 thiG thiamin biosynthesis protein G; Validated
Probab=26.79 E-value=3.6e+02 Score=23.90 Aligned_cols=109 Identities=17% Similarity=0.125 Sum_probs=71.5
Q ss_pred CCCChhHHHHHhcCC------CCeEEEeCCChHHHHHHHHHcCCccccce--eEeeccCCCCCCCCCCCCCcccccCCcc
Q 027403 55 LKPDPVLRNLLLSMP------QRKIIFTNADQKHAMEVLGRLGLEDCFEG--IICFETINPRLQPADNTDGIENNSFSSN 126 (224)
Q Consensus 55 ~~~~~g~~~~L~~l~------~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~--ii~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (224)
-.++|+..++|+..+ +.+.-.+|.+.... +.|+..|-.-.+.. =|++.
T Consensus 117 ~~LlPD~~etl~Aae~Lv~eGF~VlPY~~~D~v~a-~rLed~Gc~aVMPlgsPIGSg----------------------- 172 (267)
T CHL00162 117 KYLLPDPIGTLKAAEFLVKKGFTVLPYINADPMLA-KHLEDIGCATVMPLGSPIGSG----------------------- 172 (267)
T ss_pred cccCCChHHHHHHHHHHHHCCCEEeecCCCCHHHH-HHHHHcCCeEEeeccCcccCC-----------------------
Confidence 356788888888775 55667777666644 45666674322211 12222
Q ss_pred ccccCCCCHHHHHHHHHHhCCCCCcEEEEeCCh---hcHHHHHHcCCeEEEECCCCCCCCCceEeCCHhHHHHHHHH
Q 027403 127 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSA---RNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPE 200 (224)
Q Consensus 127 ~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~---~Di~~A~~~G~~~v~v~~~~~~~~~d~~i~~~~dl~~~i~~ 200 (224)
.|-.++..++.+++..+++ ++||-+. .|+..|.+.|++.|.++++.-. ..|..++.+.+..
T Consensus 173 ---~Gl~n~~~l~~i~e~~~vp----VivdAGIgt~sDa~~AmElGaDgVL~nSaIak------A~dP~~mA~a~~~ 236 (267)
T CHL00162 173 ---QGLQNLLNLQIIIENAKIP----VIIDAGIGTPSEASQAMELGASGVLLNTAVAQ------AKNPEQMAKAMKL 236 (267)
T ss_pred ---CCCCCHHHHHHHHHcCCCc----EEEeCCcCCHHHHHHHHHcCCCEEeecceeec------CCCHHHHHHHHHH
Confidence 2466899999998877654 7777764 6999999999999999988642 2233555555543
No 271
>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=26.61 E-value=1.1e+02 Score=28.63 Aligned_cols=79 Identities=20% Similarity=0.161 Sum_probs=54.5
Q ss_pred CCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCC
Q 027403 56 KPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 133 (224)
Q Consensus 56 ~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP 133 (224)
.-.|++..++..++ ++++++|.+...+...+++.++=..+|.....-+... -+
T Consensus 252 ~kRp~l~~fl~~ls~~~~l~~ft~s~~~y~~~v~d~l~~~k~~~~~lfr~sc~-------------------------~~ 306 (390)
T COG5190 252 SKRPELDYFLGKLSKIHELVYFTASVKRYADPVLDILDSDKVFSHRLFRESCV-------------------------SY 306 (390)
T ss_pred cCChHHHHHHhhhhhhEEEEEEecchhhhcchHHHhccccceeehhhhcccce-------------------------ec
Confidence 35589999999996 8899999998888888888776544444322222211 12
Q ss_pred CHHHHHHHHHHhCCCCCcEEEEeCChh
Q 027403 134 SLEAIETAIRIANVDPKKTIFFDDSAR 160 (224)
Q Consensus 134 ~~~~~~~al~~~~~~~~~~l~VgDs~~ 160 (224)
... |..-+.+.+.+-+.+++|+.++.
T Consensus 307 ~G~-~ikDis~i~r~l~~viiId~~p~ 332 (390)
T COG5190 307 LGV-YIKDISKIGRSLDKVIIIDNSPA 332 (390)
T ss_pred cCc-hhhhHHhhccCCCceEEeeCChh
Confidence 222 44456667778899999999985
No 272
>cd03332 LMO_FMN L-Lactate 2-monooxygenase (LMO) FMN-binding domain. LMO is a FMN-containing enzyme that catalyzes the conversion of L-lactate and oxygen to acetate, carbon dioxide, and water. LMO is a member of the family of alpha-hydroxy acid oxidases. It is thought to be a homooctamer with two- and four- fold axes in the center of the octamer.
Probab=26.14 E-value=2.4e+02 Score=26.25 Aligned_cols=123 Identities=17% Similarity=0.208 Sum_probs=67.6
Q ss_pred ChhHHHHHhcCCCCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHH
Q 027403 58 DPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEA 137 (224)
Q Consensus 58 ~~g~~~~L~~l~~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~ 137 (224)
|..+..+-+..+.++++=.-.+.+.+.... ..| .|.|+.+...++. -|+ +-|....
T Consensus 242 W~~i~~lr~~~~~pvivKgV~~~~dA~~a~-~~G----~d~I~vsnhGGr~------~d~-------------~~~t~~~ 297 (383)
T cd03332 242 WEDLAFLREWTDLPIVLKGILHPDDARRAV-EAG----VDGVVVSNHGGRQ------VDG-------------SIAALDA 297 (383)
T ss_pred HHHHHHHHHhcCCCEEEecCCCHHHHHHHH-HCC----CCEEEEcCCCCcC------CCC-------------CcCHHHH
Confidence 445555555555555543334445555444 456 6777777665542 011 2344555
Q ss_pred HHHHHHHhCCCCCcEEEEeCCh---hcHHHHHHcCCeEEEECCCCC----CCCCceEeCCHhHHHHHHHHHHhhcC
Q 027403 138 IETAIRIANVDPKKTIFFDDSA---RNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNIKEAIPEIWEGEG 206 (224)
Q Consensus 138 ~~~al~~~~~~~~~~l~VgDs~---~Di~~A~~~G~~~v~v~~~~~----~~~~d~~i~~~~dl~~~i~~~~~~~~ 206 (224)
...+.+..+- +--++++-+. .|+..|...|+++|+++++.- ..+.+.+.+-+..+.+-+...+..-|
T Consensus 298 L~ei~~~~~~--~~~vi~dGGIr~G~Dv~KALaLGA~~v~iGr~~l~~l~~~G~~gv~~~l~~l~~El~~~m~l~G 371 (383)
T cd03332 298 LPEIVEAVGD--RLTVLFDSGVRTGADIMKALALGAKAVLIGRPYAYGLALGGEDGVEHVLRNLLAELDLTMGLAG 371 (383)
T ss_pred HHHHHHHhcC--CCeEEEeCCcCcHHHHHHHHHcCCCEEEEcHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHC
Confidence 5555555541 2224444444 499999999999999988753 33344444445555555555444433
No 273
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=25.91 E-value=79 Score=25.56 Aligned_cols=36 Identities=17% Similarity=0.191 Sum_probs=29.6
Q ss_pred CCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHc
Q 027403 55 LKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRL 90 (224)
Q Consensus 55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~l 90 (224)
.++.+.+.+.|++|. .+++++|+++...+...++.+
T Consensus 16 ~~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~ 54 (204)
T TIGR01484 16 HELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQL 54 (204)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhC
Confidence 356688889999886 468899999999999888874
No 274
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=25.26 E-value=44 Score=28.77 Aligned_cols=40 Identities=20% Similarity=0.229 Sum_probs=26.3
Q ss_pred HHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCccccceeE
Q 027403 61 LRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGII 100 (224)
Q Consensus 61 ~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii 100 (224)
+.++|.+|+ ..++|+|++....+..++..-.+.+.||.+.
T Consensus 1 M~~~L~~L~~~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f 42 (220)
T PF03332_consen 1 MAELLQKLRKKVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVF 42 (220)
T ss_dssp HHHHHHHHHTTSEEEEEESS-HHHHHHHHSTTTHHHH-SEEE
T ss_pred CHHHHHHHHhcCeEEEEcchhHHHHHHHHcccchHhhCCeee
Confidence 456777775 6788999999988877774223445677544
No 275
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=25.22 E-value=2e+02 Score=25.38 Aligned_cols=87 Identities=17% Similarity=0.150 Sum_probs=55.3
Q ss_pred cccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcC-CeEEEECCCCCCCCCceEeCCHhHHHHHH
Q 027403 120 NNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAG-LHTVIVGSSVPVPPADHALNSIHNIKEAI 198 (224)
Q Consensus 120 ~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G-~~~v~v~~~~~~~~~d~~i~~~~dl~~~i 198 (224)
..+..-+.++.+..+..++..++++...+..-+++.||...|=.+-.... ...+.+.-+.+...+++...........+
T Consensus 169 ~gk~vVEvrp~~~~KG~a~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~~~~t~a~~~~~~~~~~~~~l 248 (266)
T COG1877 169 PGKMVVELRPPGVSKGAAIKYIMDELPFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKVGVGSTQAKFRLAGVYGFLRSL 248 (266)
T ss_pred eCceEEEEeeCCcchHHHHHHHHhcCCCCCCcceecCCCCccHHHHHhhccCCCceEEecCCcccccccccccHHHHHHH
Confidence 44555555566666777788888888776667999999997654444333 33444444444566666666666666666
Q ss_pred HHHHhhcC
Q 027403 199 PEIWEGEG 206 (224)
Q Consensus 199 ~~~~~~~~ 206 (224)
..+.+-.+
T Consensus 249 ~~~~~~~~ 256 (266)
T COG1877 249 YKLLEALG 256 (266)
T ss_pred HHHHHHhh
Confidence 66666555
No 276
>cd02922 FCB2_FMN Flavocytochrome b2 (FCB2) FMN-binding domain. FCB2 (AKA L-lactate:cytochrome c oxidoreductase) is a respiratory enzyme located in the intermembrane space of fungal mitochondria which catalyzes the oxidation of L-lactate to pyruvate. FCB2 also participates in a short electron-transport chain involving cytochrome c and cytochrome oxidase which ultimately directs the reducing equivalents gained from L-lactate oxidation to oxygen, yielding one molecule of ATP for every L-lactate molecule consumed. FCB2 is composed of 2 domains: a C-terminal flavin-binding domain, which includes the active site for lacate oxidation, and an N-terminal b2-cytochrome domain, required for efficient cytochrome c reduction. FCB2 is a homotetramer and contains two noncovalently bound cofactors, FMN and heme per subunit.
Probab=25.06 E-value=4.7e+02 Score=23.84 Aligned_cols=124 Identities=15% Similarity=0.128 Sum_probs=67.1
Q ss_pred ChhHHHHHhcCCCCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHH
Q 027403 58 DPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEA 137 (224)
Q Consensus 58 ~~g~~~~L~~l~~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~ 137 (224)
+..+..+-+..+.+++|=.-...+.+. .+...| .|.|+.+...+.. .|+ .-|....
T Consensus 202 ~~~i~~l~~~~~~PvivKgv~~~~dA~-~a~~~G----~d~I~vsnhgG~~------~d~-------------~~~~~~~ 257 (344)
T cd02922 202 WDDIKWLRKHTKLPIVLKGVQTVEDAV-LAAEYG----VDGIVLSNHGGRQ------LDT-------------APAPIEV 257 (344)
T ss_pred HHHHHHHHHhcCCcEEEEcCCCHHHHH-HHHHcC----CCEEEEECCCccc------CCC-------------CCCHHHH
Confidence 334444444444566644444445443 445567 5676666654432 000 1222333
Q ss_pred HHHHHHHh-CCCCCcEEEEeCCh----hcHHHHHHcCCeEEEECCCCC----CCCCceEeCCHhHHHHHHHHHHhhcC
Q 027403 138 IETAIRIA-NVDPKKTIFFDDSA----RNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNIKEAIPEIWEGEG 206 (224)
Q Consensus 138 ~~~al~~~-~~~~~~~l~VgDs~----~Di~~A~~~G~~~v~v~~~~~----~~~~d~~i~~~~dl~~~i~~~~~~~~ 206 (224)
...+.+.. .+. +++-+|+|+- .|+..|..+|++.|.++++.- ..+.+.+.+-+..+.+-+...+..-|
T Consensus 258 L~~i~~~~~~~~-~~~~vi~~GGIr~G~Dv~kalaLGA~aV~iG~~~l~~l~~~G~~gv~~~l~~l~~EL~~~m~l~G 334 (344)
T cd02922 258 LLEIRKHCPEVF-DKIEVYVDGGVRRGTDVLKALCLGAKAVGLGRPFLYALSAYGEEGVEKAIQILKDEIETTMRLLG 334 (344)
T ss_pred HHHHHHHHHHhC-CCceEEEeCCCCCHHHHHHHHHcCCCEEEECHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhC
Confidence 33333322 111 2344566662 499999999999999998743 22445555566666666666665544
No 277
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=24.88 E-value=1.5e+02 Score=24.97 Aligned_cols=44 Identities=14% Similarity=-0.063 Sum_probs=32.5
Q ss_pred CChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEe
Q 027403 57 PDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIIC 101 (224)
Q Consensus 57 ~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~ 101 (224)
..|.+.++++++. ..++++|+++...+...++.+++.. .+.+|+
T Consensus 22 ~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~-p~~~I~ 68 (249)
T TIGR01485 22 ALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLT-PDIWVT 68 (249)
T ss_pred HHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCC-CCEEEE
Confidence 4467788888876 4678999999999999988888642 333444
No 278
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=24.55 E-value=55 Score=26.97 Aligned_cols=75 Identities=11% Similarity=0.026 Sum_probs=30.8
Q ss_pred CCCChhHHHHHhcCCCCeEEEeCCChHH-------HHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccc
Q 027403 55 LKPDPVLRNLLLSMPQRKIIFTNADQKH-------AMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQ 127 (224)
Q Consensus 55 ~~~~~g~~~~L~~l~~~~~I~Tn~~~~~-------~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (224)
.+++|++...+++.+.+++++...-... .....+. +...||.|.+.++...
T Consensus 104 tElWPnll~~a~~~~ip~~LvNarls~~s~~~~~~~~~~~r~--~l~~f~~i~aqs~~da-------------------- 161 (186)
T PF04413_consen 104 TELWPNLLREAKRRGIPVVLVNARLSERSFRRYRRFPFLFRP--LLSRFDRILAQSEADA-------------------- 161 (186)
T ss_dssp ----HHHHHH-----S-EEEEEE--------------HHHHH--HGGG-SEEEESSHHHH--------------------
T ss_pred cccCHHHHHHHhhcCCCEEEEeeeeccccchhhhhhHHHHHH--HHHhCCEEEECCHHHH--------------------
Confidence 4788888877777777877776643321 1111111 2346777766554322
Q ss_pred cccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHH
Q 027403 128 RILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIA 163 (224)
Q Consensus 128 ~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~ 163 (224)
.-+.++|++++++...||...|..
T Consensus 162 ------------~r~~~lG~~~~~v~v~GnlKfd~~ 185 (186)
T PF04413_consen 162 ------------ERFRKLGAPPERVHVTGNLKFDQA 185 (186)
T ss_dssp ------------HHHHTTT-S--SEEE---GGG---
T ss_pred ------------HHHHHcCCCcceEEEeCcchhccc
Confidence 456788999999999999877753
No 279
>TIGR02667 moaB_proteo molybdenum cofactor biosynthesis protein B, proteobacterial. This model represents the MoaB protein molybdopterin biosynthesis regions in Proteobacteria. This crystallized but incompletely characterized protein is thought to be involved in, though not required for, early steps in molybdopterin biosynthesis. It may bind a molybdopterin precursor. A distinctive conserved motif PCN near the C-terminus helps distinguish this clade from other homologs, including sets of proteins designated MogA.
Probab=24.47 E-value=3.7e+02 Score=21.51 Aligned_cols=61 Identities=10% Similarity=0.122 Sum_probs=44.0
Q ss_pred CHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHc-----CCeEEEECCCCCCCCCceEeCCHhHH
Q 027403 134 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA-----GLHTVIVGSSVPVPPADHALNSIHNI 194 (224)
Q Consensus 134 ~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~-----G~~~v~v~~~~~~~~~d~~i~~~~dl 194 (224)
+..+....++++|......-.|.|....|..+.+. +.+.|.++-|......|+.-+-+.++
T Consensus 23 n~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVIttGGtg~g~~D~t~eal~~l 88 (163)
T TIGR02667 23 SGQYLVERLTEAGHRLADRAIVKDDIYQIRAQVSAWIADPDVQVILITGGTGFTGRDVTPEALEPL 88 (163)
T ss_pred cHHHHHHHHHHCCCeEEEEEEcCCCHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCCcHHHHHHH
Confidence 56677888999999988899999999888877532 57767766555556667765433333
No 280
>cd08197 DOIS 2-deoxy-scyllo-inosose synthase (DOIS) catalyzes carbocycle formation from D-glucose-6-phosphate to 2-deoxy-scyllo-inosose through a multistep reaction in the biosynthesis of aminoglycoside antibiotics. 2-deoxy-scyllo-inosose synthase (DOIS) catalyzes carbocycle formation from D-glucose-6-phosphate to 2-deoxy-scyllo-inosose through a multistep reaction in the biosynthesis of aminoglycoside antibiotics. 2-Deoxystreptamine (DOS)-containing aminoglycoside antibiotics includes neomycin, kanamycin, gentamicin, and ribostamycin. They are important antibacterial agents. DOIS is a homologue of the dehydroquinate synthase which catalyzes the cyclization of 3-deoxy-D-arabino-heputulosonate-7-phosphate to dehydroquinate (DHQ) in the shikimate pathway.
Probab=24.25 E-value=5.5e+02 Score=23.37 Aligned_cols=46 Identities=17% Similarity=0.276 Sum_probs=31.1
Q ss_pred CCCHHHHHHHHHHh---CCCCCc-EEEEeCCh-hcHHHHHH----cCCeEEEECC
Q 027403 132 KPSLEAIETAIRIA---NVDPKK-TIFFDDSA-RNIASAKA----AGLHTVIVGS 177 (224)
Q Consensus 132 KP~~~~~~~al~~~---~~~~~~-~l~VgDs~-~Di~~A~~----~G~~~v~v~~ 177 (224)
-|.......+++.+ +++++. ++-||.+. .|+..+.+ .|++.+.|++
T Consensus 64 ~k~~~~v~~~~~~~~~~~~dr~~~IIAvGGGsv~D~ak~~A~~~~rgip~I~IPT 118 (355)
T cd08197 64 HKTLSTLSDLVERALALGATRRSVIVALGGGVVGNIAGLLAALLFRGIRLVHIPT 118 (355)
T ss_pred CCCHHHHHHHHHHHHHcCCCCCcEEEEECCcHHHHHHHHHHHHhccCCCEEEecC
Confidence 45556665555444 555444 66699986 59987765 3889999976
No 281
>PRK08304 stage V sporulation protein AD; Validated
Probab=23.54 E-value=1.9e+02 Score=26.49 Aligned_cols=43 Identities=21% Similarity=0.254 Sum_probs=29.5
Q ss_pred HHHHHHHHHHhCCCCCc--EEEEeCChhcH----HHHHHcCCeEEEECC
Q 027403 135 LEAIETAIRIANVDPKK--TIFFDDSARNI----ASAKAAGLHTVIVGS 177 (224)
Q Consensus 135 ~~~~~~al~~~~~~~~~--~l~VgDs~~Di----~~A~~~G~~~v~v~~ 177 (224)
.++...++++.|+++++ .+++||..+-. ..|+..|+++..+..
T Consensus 61 ~eAa~~ALekAGI~~~DID~lI~Gdll~Q~~sAs~vA~~LGIPa~dV~g 109 (337)
T PRK08304 61 EDAIQQALQKANLKKSDIDYLLAGDLLNQIISANFAARELGIPFLGLYG 109 (337)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCcchHHHHHHHhCCcEEEEec
Confidence 45667788888998875 78899876422 345667876666543
No 282
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=23.25 E-value=96 Score=26.90 Aligned_cols=37 Identities=3% Similarity=-0.112 Sum_probs=29.3
Q ss_pred CCCChhHHHHHhcCC----CCeEEEeCCChHHHHHHHHHcC
Q 027403 55 LKPDPVLRNLLLSMP----QRKIIFTNADQKHAMEVLGRLG 91 (224)
Q Consensus 55 ~~~~~g~~~~L~~l~----~~~~I~Tn~~~~~~~~~l~~lg 91 (224)
..+.+.+.+.|+.|. .+++|+|+++...+...++.++
T Consensus 35 ~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~ 75 (266)
T PRK10187 35 VVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYR 75 (266)
T ss_pred ccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCccc
Confidence 356678888888874 4688999999998888876654
No 283
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=22.89 E-value=5.6e+02 Score=23.01 Aligned_cols=106 Identities=11% Similarity=0.108 Sum_probs=54.8
Q ss_pred hHHHHHhcCC-CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHHH
Q 027403 60 VLRNLLLSMP-QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAI 138 (224)
Q Consensus 60 g~~~~L~~l~-~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~ 138 (224)
.+.+.|..+- ..-.+++++....+...+..++- =|.|++..... -+....+
T Consensus 56 ~le~~la~l~g~~~~~~~~sG~~ai~~~~~ll~~---Gd~Vl~~~~~y-------------------------~~t~~~~ 107 (366)
T PRK08247 56 VLEQAIADLEGGDQGFACSSGMAAIQLVMSLFRS---GDELIVSSDLY-------------------------GGTYRLF 107 (366)
T ss_pred HHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHhCC---CCEEEEecCCc-------------------------CcHHHHH
Confidence 3444555553 33456666666555545443322 25666655432 1244556
Q ss_pred HHHHHHhCCCCCcEEEEeC-ChhcHHHHHHcCCeEEEECCCCCCCCCceEeCCHhHHHHHHH
Q 027403 139 ETAIRIANVDPKKTIFFDD-SARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIP 199 (224)
Q Consensus 139 ~~al~~~~~~~~~~l~VgD-s~~Di~~A~~~G~~~v~v~~~~~~~~~d~~i~~~~dl~~~i~ 199 (224)
...++.+|+. +.+++- ...+++.+..-..+.|++.++.. +...+.++.+|.++..
T Consensus 108 ~~~~~~~G~~---v~~vd~~d~~~l~~~i~~~tklv~le~P~N---P~~~~~dl~~I~~la~ 163 (366)
T PRK08247 108 EEHWKKWNVR---FVYVNTASLKAIEQAITPNTKAIFIETPTN---PLMQETDIAAIAKIAK 163 (366)
T ss_pred HHHhhccCce---EEEECCCCHHHHHHhcccCceEEEEECCCC---CCCcHHHHHHHHHHHH
Confidence 6667777754 344432 23456666555667778766642 2333445555555443
No 284
>cd00886 MogA_MoaB MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea, and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MogA, together with MoeA, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes. In contrast, MoaB shows high similarity to MogA, but little is known about its physiological role. All well studied members of this family form highly stable trimers.
Probab=22.30 E-value=2.2e+02 Score=22.42 Aligned_cols=62 Identities=15% Similarity=0.154 Sum_probs=45.1
Q ss_pred CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHc-----CCeEEEECCCCCCCCCceEeCCHhHH
Q 027403 133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA-----GLHTVIVGSSVPVPPADHALNSIHNI 194 (224)
Q Consensus 133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~-----G~~~v~v~~~~~~~~~d~~i~~~~dl 194 (224)
.+..+....+++.|.+....-.|.|....|..+.+. +.+.|.+.-|......|++.+-+.++
T Consensus 20 ~n~~~l~~~l~~~G~~v~~~~~v~Dd~~~i~~~l~~~~~~~~~DlVittGG~s~g~~D~t~~al~~~ 86 (152)
T cd00886 20 RSGPALVELLEEAGHEVVAYEIVPDDKDEIREALIEWADEDGVDLILTTGGTGLAPRDVTPEATRPL 86 (152)
T ss_pred chHHHHHHHHHHcCCeeeeEEEcCCCHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCcCcHHHHHHH
Confidence 356677888999999988999999999888776553 67766666555555667765544444
No 285
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=22.22 E-value=3.6e+02 Score=26.29 Aligned_cols=33 Identities=12% Similarity=0.239 Sum_probs=25.0
Q ss_pred HHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECC
Q 027403 140 TAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGS 177 (224)
Q Consensus 140 ~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~ 177 (224)
.-+++.|++ ++|||+.. ...|.++|+..+++.+
T Consensus 149 ~~lk~~G~~----~vvG~~~~-~~~A~~~g~~g~~~~s 181 (538)
T PRK15424 149 NELKANGIE----AVVGAGLI-TDLAEEAGMTGIFIYS 181 (538)
T ss_pred HHHHHCCCC----EEEcCchH-HHHHHHhCCceEEecC
Confidence 344555654 78899876 7889999999998864
No 286
>PRK12815 carB carbamoyl phosphate synthase large subunit; Reviewed
Probab=22.02 E-value=8.5e+02 Score=25.80 Aligned_cols=67 Identities=12% Similarity=-0.001 Sum_probs=45.5
Q ss_pred CHHHHHHHHHHhCCCCCcEEEEeCChhcH-HHHHHcCCeEEEECCCCCCCCCceEeCCHhHHHHHHHHH
Q 027403 134 SLEAIETAIRIANVDPKKTIFFDDSARNI-ASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEI 201 (224)
Q Consensus 134 ~~~~~~~al~~~~~~~~~~l~VgDs~~Di-~~A~~~G~~~v~v~~~~~~~~~d~~i~~~~dl~~~i~~~ 201 (224)
++..+...++++|++.-....+. +..++ ..+...|.+++.=+........-+++.+-.++.+.+...
T Consensus 670 DK~~f~~ll~~~GIp~P~~~~~~-s~ee~~~~~~~igyPvVVKP~~~~Gg~gv~iv~~~eeL~~~l~~~ 737 (1068)
T PRK12815 670 DRDRFYQLLDELGLPHVPGLTAT-DEEEAFAFAKRIGYPVLIRPSYVIGGQGMAVVYDEPALEAYLAEN 737 (1068)
T ss_pred CHHHHHHHHHHcCcCCCCeEEeC-CHHHHHHHHHhcCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHh
Confidence 56667889999999766666664 44444 456678887654333322334566889999999888876
No 287
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.92 E-value=1.8e+02 Score=26.79 Aligned_cols=57 Identities=19% Similarity=0.310 Sum_probs=35.7
Q ss_pred hCCCCCcEEEEeCCh-hcHHHHHHc------CCeEEEECCCCCCCCCceEeCCHhHHHHHHHHHHhhc
Q 027403 145 ANVDPKKTIFFDDSA-RNIASAKAA------GLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEGE 205 (224)
Q Consensus 145 ~~~~~~~~l~VgDs~-~Di~~A~~~------G~~~v~v~~~~~~~~~d~~i~~~~dl~~~i~~~~~~~ 205 (224)
..-+.++++||||+. ..+..+... |+..+-...++ ..++-+|+=|=++.++++++.+
T Consensus 112 k~~~a~kvLvvGDslm~gla~gl~~al~t~~~i~i~~~sn~S----SGlvr~dYfdWpk~i~~~l~~~ 175 (354)
T COG2845 112 KSRDADKVLVVGDSLMQGLAEGLDKALATSPGITIVTRSNGS----SGLVRDDYFDWPKAIPELLDKH 175 (354)
T ss_pred hCCCCCEEEEechHHhhhhHHHHHHHhccCCCcEEEEeecCC----CCcccccccccHHHHHHHHHhc
Confidence 334679999999997 466555544 33333333332 3345556667777778877776
No 288
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=21.89 E-value=87 Score=27.93 Aligned_cols=47 Identities=23% Similarity=0.216 Sum_probs=29.9
Q ss_pred CCCChhHHHHHhcCC-------CCeEEEeCCC---hHH-HHHHHHHcCCccccceeEe
Q 027403 55 LKPDPVLRNLLLSMP-------QRKIIFTNAD---QKH-AMEVLGRLGLEDCFEGIIC 101 (224)
Q Consensus 55 ~~~~~g~~~~L~~l~-------~~~~I~Tn~~---~~~-~~~~l~~lgl~~~fd~ii~ 101 (224)
-.+.|++.++++.|+ .+..++||+. ... +..+.+++|+.---+.|++
T Consensus 15 ~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~~~~~i~~ 72 (321)
T TIGR01456 15 KKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDVSPLQVIQ 72 (321)
T ss_pred ccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCCCHHHHHh
Confidence 456888987776665 3577999986 343 4444488887533333443
No 289
>PLN02834 3-dehydroquinate synthase
Probab=21.73 E-value=6.8e+02 Score=23.55 Aligned_cols=47 Identities=9% Similarity=0.215 Sum_probs=32.0
Q ss_pred CCCHHHHHHHHHH---hCCCCC-cEEEEeCCh-hcHHHHH----HcCCeEEEECCC
Q 027403 132 KPSLEAIETAIRI---ANVDPK-KTIFFDDSA-RNIASAK----AAGLHTVIVGSS 178 (224)
Q Consensus 132 KP~~~~~~~al~~---~~~~~~-~~l~VgDs~-~Di~~A~----~~G~~~v~v~~~ 178 (224)
-|+.+.+..+++. .++++. -++-||-+. .|+..+. ..|++.|.|++.
T Consensus 143 ~ksl~~v~~~~~~l~~~~~dr~~~VIAiGGGsv~D~ak~~A~~y~rgiplI~VPTT 198 (433)
T PLN02834 143 YKDMETLMKVFDKALESRLDRRCTFVALGGGVIGDMCGFAAASYQRGVNFVQIPTT 198 (433)
T ss_pred CCCHHHHHHHHHHHHhcCCCcCcEEEEECChHHHHHHHHHHHHhcCCCCEEEECCc
Confidence 4557777766444 466533 477788886 5998754 458999998774
No 290
>PLN02151 trehalose-phosphatase
Probab=21.16 E-value=1.2e+02 Score=27.90 Aligned_cols=35 Identities=9% Similarity=0.077 Sum_probs=29.3
Q ss_pred CCCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHH
Q 027403 54 KLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLG 88 (224)
Q Consensus 54 ~~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~ 88 (224)
...+.++++++|++|. ..++|+|+++...+...+.
T Consensus 118 ~A~~~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~ 154 (354)
T PLN02151 118 RAFMSKKMRNTVRKLAKCFPTAIVSGRCREKVSSFVK 154 (354)
T ss_pred cccCCHHHHHHHHHHhcCCCEEEEECCCHHHHHHHcC
Confidence 4467889999999996 6799999999998887764
No 291
>PRK05406 LamB/YcsF family protein; Provisional
Probab=20.91 E-value=4.9e+02 Score=22.76 Aligned_cols=73 Identities=16% Similarity=0.179 Sum_probs=50.3
Q ss_pred CCCHHHHHHHHHHh-----------CCCCCcEEEEeCChhcHHHHHHcCCeEE---EECCCCC-------CCCCceEeCC
Q 027403 132 KPSLEAIETAIRIA-----------NVDPKKTIFFDDSARNIASAKAAGLHTV---IVGSSVP-------VPPADHALNS 190 (224)
Q Consensus 132 KP~~~~~~~al~~~-----------~~~~~~~l~VgDs~~Di~~A~~~G~~~v---~v~~~~~-------~~~~d~~i~~ 190 (224)
||+-.+|..+.+.- .++|+-.++.-.+..-...|++.|++.+ |..+.+. +..+..++.+
T Consensus 110 KPHGALYN~~~~d~~~a~av~~ai~~~~~~l~l~~~~~s~~~~~A~~~Gl~~~~E~FADR~Y~~dG~Lv~R~~~gAvi~d 189 (246)
T PRK05406 110 KPHGALYNMAAKDPALADAVAEAVAAVDPSLILVGLAGSELIRAAEEAGLRTASEVFADRAYTADGTLVPRSQPGAVIHD 189 (246)
T ss_pred CccHHHHHHHhcCHHHHHHHHHHHHHhCCCcEEEecCChHHHHHHHHcCCcEEEEEEecCCcCCCCCCcCCCCCCCccCC
Confidence 99988887654432 2366644544455568899999999875 3444432 4557888999
Q ss_pred HhHHHHHHHHHHhh
Q 027403 191 IHNIKEAIPEIWEG 204 (224)
Q Consensus 191 ~~dl~~~i~~~~~~ 204 (224)
..++.+-+.++.+.
T Consensus 190 ~~~v~~~~~~~~~~ 203 (246)
T PRK05406 190 EEEAAAQVLQMVQE 203 (246)
T ss_pred HHHHHHHHHHHHHc
Confidence 99988888777654
No 292
>PF05690 ThiG: Thiazole biosynthesis protein ThiG; InterPro: IPR008867 This family consists of several bacterial thiazole biosynthesis protein G sequences. ThiG, together with ThiF and ThiH, is proposed to be involved in the synthesis of 4-methyl-5-(b-hydroxyethyl)thiazole (THZ) which is an intermediate in the thiazole production pathway [].; GO: 0009228 thiamine biosynthetic process; PDB: 1WV2_B 1TYG_C 1XM3_B 2HTM_C 2YZR_C.
Probab=20.68 E-value=3.8e+02 Score=23.51 Aligned_cols=97 Identities=16% Similarity=0.097 Sum_probs=58.7
Q ss_pred CCCCChhHHHHHhcCC------CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccc
Q 027403 54 KLKPDPVLRNLLLSMP------QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQ 127 (224)
Q Consensus 54 ~~~~~~g~~~~L~~l~------~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (224)
.-.++|+..++|+..+ +.+.-.+|.+.... +.|+..|-.-.+.. +.-++.
T Consensus 102 ~~~L~PD~~etl~Aae~Lv~eGF~VlPY~~~D~v~a-krL~d~GcaavMPl---gsPIGS-------------------- 157 (247)
T PF05690_consen 102 DKTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLA-KRLEDAGCAAVMPL---GSPIGS-------------------- 157 (247)
T ss_dssp TTT--B-HHHHHHHHHHHHHTT-EEEEEE-S-HHHH-HHHHHTT-SEBEEB---SSSTTT--------------------
T ss_pred CCCcCCChhHHHHHHHHHHHCCCEEeecCCCCHHHH-HHHHHCCCCEEEec---cccccc--------------------
Confidence 3456788888888775 56667777666644 45666774322211 111111
Q ss_pred cccCCCCHHHHHHHHHHhCCCCCcEEEEeCCh---hcHHHHHHcCCeEEEECCCC
Q 027403 128 RILCKPSLEAIETAIRIANVDPKKTIFFDDSA---RNIASAKAAGLHTVIVGSSV 179 (224)
Q Consensus 128 ~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~---~Di~~A~~~G~~~v~v~~~~ 179 (224)
..|--++..++.++++.+++ ++|+-+. .|..-|.+.|++.|.+++..
T Consensus 158 -g~Gi~n~~~l~~i~~~~~vP----vIvDAGiG~pSdaa~AMElG~daVLvNTAi 207 (247)
T PF05690_consen 158 -GRGIQNPYNLRIIIERADVP----VIVDAGIGTPSDAAQAMELGADAVLVNTAI 207 (247)
T ss_dssp ----SSTHHHHHHHHHHGSSS----BEEES---SHHHHHHHHHTT-SEEEESHHH
T ss_pred -CcCCCCHHHHHHHHHhcCCc----EEEeCCCCCHHHHHHHHHcCCceeehhhHH
Confidence 12466889999999999886 7777764 69999999999999998753
No 293
>cd00733 GlyRS_alpha_core Class II Glycyl-tRNA synthetase (GlyRS) alpha subunit core catalytic domain. GlyRS functions as a homodimer in eukaryotes, archaea and some bacteria and as a heterotetramer in the remainder of prokaryotes and in arabidopsis. It is responsible for the attachment of glycine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. This alignment contains only sequences from the GlyRS form which heterotetramerizes. The homodimer form of GlyRS is in a different family of class II aaRS. Class II assignment is based upon structure and the presence of three characteristic sequence motifs.
Probab=20.01 E-value=1.4e+02 Score=26.48 Aligned_cols=41 Identities=20% Similarity=0.252 Sum_probs=34.6
Q ss_pred HHHHHHHHHHhCCCCC--cEEEEeCCh-hcHHHHHHcCCeEEEEC
Q 027403 135 LEAIETAIRIANVDPK--KTIFFDDSA-RNIASAKAAGLHTVIVG 176 (224)
Q Consensus 135 ~~~~~~al~~~~~~~~--~~l~VgDs~-~Di~~A~~~G~~~v~v~ 176 (224)
.++|..-++.+|++|. ++-||.|.- +--.+|+-.|+- ||..
T Consensus 88 QelYL~SL~~lGid~~~hDIRFVEDnWEsPTLGAwGLGWE-VWld 131 (279)
T cd00733 88 QELYLESLEALGINPKEHDIRFVEDNWESPTLGAWGLGWE-VWLD 131 (279)
T ss_pred HHHHHHHHHHhCCCccccCeeEeecCCCCCcccccccccE-EEEC
Confidence 5788889999999875 599999996 789999999997 6653
Done!