BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 027404
         (224 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|A7SVT1|FICD_NEMVE Adenosine monophosphate-protein transferase FICD homolog
           OS=Nematostella vectensis GN=v1g194069 PE=3 SV=1
          Length = 427

 Score = 35.0 bits (79), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 3/61 (4%)

Query: 133 GKESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVL 192
           GK S+++ ++ Q+ +   P    +L  Y +FL++   D V+AE    RA+ A P D   L
Sbjct: 91  GKHSKAVKLF-QQAVSLAPHHPEILLQYGEFLEQ--HDVVQAEHLYNRALTANPLDSRAL 147

Query: 193 S 193
           +
Sbjct: 148 A 148


>sp|Q7K4B6|TMTC3_DROME Transmembrane and TPR repeat-containing protein CG4050
           OS=Drosophila melanogaster GN=CG4050 PE=2 SV=1
          Length = 926

 Score = 33.1 bits (74), Expect = 1.7,   Method: Composition-based stats.
 Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 7/92 (7%)

Query: 135 ESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAK--PGDGNVL 192
           +S+   VY+ + I+ YPE    L N A  L+E+ G+  +      R+ L K    D    
Sbjct: 680 KSQQAQVYFNKAIELYPEHEQALLNSAILLQELGGEEARR---VSRSRLYKVLENDDQNE 736

Query: 193 SMYGDL--IWINHKDAPRAKSYFDRAVHSAPD 222
            +Y +L  + ++      A+ +F RA+H   D
Sbjct: 737 KVYFNLGMLAMDESSFDEAEQFFKRAIHLKAD 768


>sp|C4LA04|HCP_TOLAT Hydroxylamine reductase OS=Tolumonas auensis (strain DSM 9187 /
           TA4) GN=hcp PE=3 SV=1
          Length = 553

 Score = 33.1 bits (74), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 5/35 (14%)

Query: 123 FLGGGGDGDSGKESESMDVYYQEMIKAYPEDALVL 157
           FL GG DGD  +       YY EM KA P+D+L+L
Sbjct: 403 FLIGGCDGDKQERG-----YYTEMAKAVPQDSLIL 432


>sp|Q8IUR5|TMTC1_HUMAN Transmembrane and TPR repeat-containing protein 1 OS=Homo sapiens
           GN=TMTC1 PE=1 SV=3
          Length = 882

 Score = 32.7 bits (73), Expect = 2.2,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 5/84 (5%)

Query: 138 SMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGD 197
           S +  ++  ++  P +A V  NYA FLK+ +G   +A  +   A+   P   + L+  G 
Sbjct: 467 SRESLFRSGVQTLPHNAKVHYNYANFLKD-QGRNKEAIYHYRTALKLYPRHASALNNLGT 525

Query: 198 LIWINHKDAPRAKSYFDRAVHSAP 221
           L     +D   AK Y+ RA+   P
Sbjct: 526 LT----RDTAEAKMYYQRALQLHP 545


>sp|Q4WVE3|DCL1_ASPFU Dicer-like protein 1 OS=Neosartorya fumigata (strain ATCC MYA-4609
           / Af293 / CBS 101355 / FGSC A1100) GN=dcl1 PE=3 SV=3
          Length = 1537

 Score = 32.3 bits (72), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 2/73 (2%)

Query: 39  SSSSIKRIPRTLSDGDLQQLHITKTKTLFNNPLIPRDLLVEEEEGGGGEDGQGEFSTYNE 98
           S+ +  R P  LSDG+L   H+ K + L N  L PR+  +E  E    ++      T + 
Sbjct: 92  SNEAFDRAPIALSDGELSIAHLVKKQDLGNGMLDPREYQIELFERAKTQNTIAVLDTGSG 151

Query: 99  TTPRLSGGLLLDH 111
            T  L   LLL H
Sbjct: 152 KT--LIAVLLLRH 162


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.315    0.137    0.410 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,441,501
Number of Sequences: 539616
Number of extensions: 4816403
Number of successful extensions: 24255
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 121
Number of HSP's successfully gapped in prelim test: 247
Number of HSP's that attempted gapping in prelim test: 17551
Number of HSP's gapped (non-prelim): 4405
length of query: 224
length of database: 191,569,459
effective HSP length: 113
effective length of query: 111
effective length of database: 130,592,851
effective search space: 14495806461
effective search space used: 14495806461
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 59 (27.3 bits)