Query 027404
Match_columns 224
No_of_seqs 167 out of 1193
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 15:39:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027404.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027404hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gco_A Protein STI-1; structur 99.7 1.7E-16 6E-21 121.8 14.1 89 133-223 26-114 (126)
2 3gyz_A Chaperone protein IPGC; 99.7 7.2E-16 2.5E-20 123.5 13.0 88 134-223 50-137 (151)
3 4ga2_A E3 SUMO-protein ligase 99.6 4.7E-15 1.6E-19 116.3 13.1 88 134-223 45-133 (150)
4 1hxi_A PEX5, peroxisome target 99.6 2.7E-15 9.1E-20 114.2 11.2 88 134-223 31-118 (121)
5 3sz7_A HSC70 cochaperone (SGT) 99.6 8.4E-15 2.9E-19 114.6 13.4 88 134-223 25-112 (164)
6 2vgx_A Chaperone SYCD; alterna 99.6 7.1E-15 2.4E-19 115.5 12.8 88 134-223 35-122 (148)
7 2xcb_A PCRH, regulatory protei 99.6 6.2E-15 2.1E-19 113.5 12.0 88 134-223 32-119 (142)
8 3upv_A Heat shock protein STI1 99.6 1E-14 3.5E-19 108.9 12.6 86 133-220 17-102 (126)
9 1zu2_A Mitochondrial import re 99.6 2.7E-15 9.3E-20 123.3 9.9 89 134-223 16-124 (158)
10 4gcn_A Protein STI-1; structur 99.6 1.3E-14 4.3E-19 111.1 11.8 88 133-222 21-115 (127)
11 3k9i_A BH0479 protein; putativ 99.6 4.3E-15 1.5E-19 110.8 6.7 89 133-223 3-94 (117)
12 3urz_A Uncharacterized protein 99.5 3.6E-14 1.2E-18 116.3 11.7 89 133-223 17-121 (208)
13 2hr2_A Hypothetical protein; a 99.5 2.2E-14 7.7E-19 117.9 10.3 88 134-223 25-135 (159)
14 4ga2_A E3 SUMO-protein ligase 99.5 6.7E-15 2.3E-19 115.5 6.8 89 133-223 10-98 (150)
15 3rkv_A Putative peptidylprolyl 99.5 3.7E-14 1.3E-18 110.7 10.8 89 133-223 24-130 (162)
16 3q49_B STIP1 homology and U bo 99.5 7.7E-14 2.6E-18 104.3 11.7 87 134-222 23-109 (137)
17 1elw_A TPR1-domain of HOP; HOP 99.5 2.6E-13 8.9E-18 97.0 13.6 89 133-223 17-105 (118)
18 3vtx_A MAMA; tetratricopeptide 99.5 9.2E-14 3.2E-18 109.3 11.7 88 134-223 87-174 (184)
19 2kck_A TPR repeat; tetratricop 99.5 2.9E-13 1E-17 96.1 12.4 89 133-223 19-110 (112)
20 2pl2_A Hypothetical conserved 99.5 1.1E-13 3.8E-18 114.1 11.6 90 133-223 18-117 (217)
21 2vyi_A SGTA protein; chaperone 99.5 5.6E-13 1.9E-17 96.6 13.9 88 134-223 26-113 (131)
22 2lni_A Stress-induced-phosphop 99.5 1.7E-13 5.9E-18 100.5 10.8 88 134-223 30-117 (133)
23 4gyw_A UDP-N-acetylglucosamine 99.5 1.7E-13 5.8E-18 134.8 14.1 88 134-223 23-110 (723)
24 3urz_A Uncharacterized protein 99.5 2E-13 6.9E-18 111.8 12.0 89 134-223 68-190 (208)
25 2dba_A Smooth muscle cell asso 99.5 4.1E-13 1.4E-17 100.5 12.5 88 134-223 42-132 (148)
26 2xev_A YBGF; tetratricopeptide 99.5 6.4E-13 2.2E-17 98.2 13.2 89 133-223 15-109 (129)
27 1a17_A Serine/threonine protei 99.5 7.5E-13 2.6E-17 100.9 13.9 89 133-223 26-114 (166)
28 4gyw_A UDP-N-acetylglucosamine 99.5 3.4E-13 1.2E-17 132.7 14.0 88 134-223 57-144 (723)
29 1na0_A Designed protein CTPR3; 99.5 1.6E-12 5.6E-17 93.4 14.0 88 134-223 23-110 (125)
30 2pl2_A Hypothetical conserved 99.5 5.1E-13 1.7E-17 110.1 12.2 87 134-223 98-184 (217)
31 2kat_A Uncharacterized protein 99.5 4.5E-13 1.5E-17 98.8 10.5 84 137-222 2-85 (115)
32 3gyz_A Chaperone protein IPGC; 99.4 1E-13 3.5E-18 110.9 6.7 85 138-224 20-104 (151)
33 2fbn_A 70 kDa peptidylprolyl i 99.4 1.5E-12 5.1E-17 104.7 13.3 88 134-223 52-155 (198)
34 4i17_A Hypothetical protein; T 99.4 2E-12 6.8E-17 105.2 13.3 88 134-223 21-109 (228)
35 2e2e_A Formate-dependent nitri 99.4 1.9E-12 6.5E-17 101.6 12.6 89 134-223 58-148 (177)
36 1elr_A TPR2A-domain of HOP; HO 99.4 1.9E-12 6.3E-17 94.1 11.5 88 133-222 17-111 (131)
37 1p5q_A FKBP52, FK506-binding p 99.4 2E-12 6.8E-17 114.4 13.9 88 134-223 161-263 (336)
38 2h6f_A Protein farnesyltransfe 99.4 9.3E-13 3.2E-17 120.0 10.8 88 134-223 111-199 (382)
39 2vgx_A Chaperone SYCD; alterna 99.4 3.1E-13 1.1E-17 106.0 6.7 84 139-224 6-89 (148)
40 2h6f_A Protein farnesyltransfe 99.4 1.6E-12 5.4E-17 118.5 12.1 88 134-223 145-233 (382)
41 3vtx_A MAMA; tetratricopeptide 99.4 6.3E-12 2.2E-16 98.7 14.0 86 134-221 19-104 (184)
42 1xnf_A Lipoprotein NLPI; TPR, 99.4 5.2E-12 1.8E-16 103.5 13.5 88 134-223 57-144 (275)
43 2c2l_A CHIP, carboxy terminus 99.4 1.6E-12 5.6E-17 111.8 10.8 89 133-223 17-105 (281)
44 3mkr_A Coatomer subunit epsilo 99.4 4.3E-12 1.5E-16 110.1 13.2 88 134-223 180-268 (291)
45 1hh8_A P67PHOX, NCF-2, neutrop 99.4 4.8E-12 1.6E-16 101.2 12.5 88 134-223 51-154 (213)
46 4i17_A Hypothetical protein; T 99.4 2.6E-12 8.9E-17 104.5 11.0 87 134-222 56-149 (228)
47 2e2e_A Formate-dependent nitri 99.4 1.9E-12 6.5E-17 101.6 9.6 92 131-223 21-114 (177)
48 2fo7_A Synthetic consensus TPR 99.4 1.2E-11 3.9E-16 89.4 12.9 87 134-222 49-135 (136)
49 1wao_1 Serine/threonine protei 99.4 6.4E-12 2.2E-16 116.9 14.2 90 132-223 18-107 (477)
50 1kt0_A FKBP51, 51 kDa FK506-bi 99.4 5.3E-12 1.8E-16 116.4 12.5 88 134-223 282-384 (457)
51 2xcb_A PCRH, regulatory protei 99.4 1.3E-12 4.5E-17 100.4 7.2 83 140-224 4-86 (142)
52 2fo7_A Synthetic consensus TPR 99.3 2.3E-11 7.8E-16 87.8 13.3 88 134-223 15-102 (136)
53 4gco_A Protein STI-1; structur 99.3 2.6E-12 8.7E-17 98.4 8.3 77 145-223 4-80 (126)
54 3as5_A MAMA; tetratricopeptide 99.3 1.7E-11 5.8E-16 93.6 12.7 88 134-223 90-177 (186)
55 3uq3_A Heat shock protein STI1 99.3 1.3E-11 4.6E-16 99.5 12.5 85 134-220 153-237 (258)
56 3as5_A MAMA; tetratricopeptide 99.3 3.6E-11 1.2E-15 91.8 13.8 88 134-223 56-143 (186)
57 4eqf_A PEX5-related protein; a 99.3 1.2E-11 4.1E-16 106.7 12.4 88 134-223 191-280 (365)
58 1ihg_A Cyclophilin 40; ppiase 99.3 7E-12 2.4E-16 113.2 10.7 88 134-223 237-340 (370)
59 4eqf_A PEX5-related protein; a 99.3 1.3E-11 4.6E-16 106.4 11.8 87 134-222 79-165 (365)
60 2q7f_A YRRB protein; TPR, prot 99.3 3.4E-11 1.2E-15 96.8 12.4 87 134-222 105-191 (243)
61 2kc7_A BFR218_protein; tetratr 99.3 4.9E-12 1.7E-16 90.4 6.6 80 134-223 14-94 (99)
62 3ma5_A Tetratricopeptide repea 99.3 1.2E-11 4.2E-16 90.4 8.8 72 149-222 2-73 (100)
63 3qou_A Protein YBBN; thioredox 99.3 2.3E-11 8E-16 104.7 12.0 88 134-223 131-252 (287)
64 4abn_A Tetratricopeptide repea 99.3 1.1E-11 3.7E-16 114.5 10.3 88 134-223 193-291 (474)
65 2vsy_A XCC0866; transferase, g 99.3 2.9E-11 9.9E-16 112.6 13.2 88 134-223 37-124 (568)
66 1fch_A Peroxisomal targeting s 99.3 3.3E-11 1.1E-15 103.0 12.3 87 134-222 231-317 (368)
67 2q7f_A YRRB protein; TPR, prot 99.3 9.3E-11 3.2E-15 94.2 13.9 88 134-223 71-158 (243)
68 2if4_A ATFKBP42; FKBP-like, al 99.3 6.7E-12 2.3E-16 111.2 7.8 89 133-223 192-297 (338)
69 1fch_A Peroxisomal targeting s 99.3 7.4E-11 2.5E-15 100.8 13.5 88 134-223 78-165 (368)
70 1hh8_A P67PHOX, NCF-2, neutrop 99.2 5.5E-11 1.9E-15 94.9 11.5 86 133-223 19-104 (213)
71 3u4t_A TPR repeat-containing p 99.2 3.5E-11 1.2E-15 98.9 10.5 88 134-223 88-175 (272)
72 1w3b_A UDP-N-acetylglucosamine 99.2 8.1E-11 2.8E-15 102.5 12.9 87 134-222 47-133 (388)
73 3ieg_A DNAJ homolog subfamily 99.2 1E-10 3.4E-15 98.4 12.8 87 133-221 16-102 (359)
74 4abn_A Tetratricopeptide repea 99.2 2.5E-11 8.6E-16 112.0 9.9 87 134-223 116-212 (474)
75 3uq3_A Heat shock protein STI1 99.2 7.2E-11 2.5E-15 95.2 11.4 88 134-223 93-206 (258)
76 3cv0_A Peroxisome targeting si 99.2 1.4E-10 4.8E-15 96.8 13.1 87 134-222 152-238 (327)
77 3cv0_A Peroxisome targeting si 99.2 2E-10 6.7E-15 95.9 14.0 88 134-223 35-122 (327)
78 2pzi_A Probable serine/threoni 99.2 2.3E-11 8E-16 117.5 9.5 87 134-223 447-533 (681)
79 1w3b_A UDP-N-acetylglucosamine 99.2 1.6E-10 5.4E-15 100.7 13.8 88 134-223 13-100 (388)
80 1xnf_A Lipoprotein NLPI; TPR, 99.2 3.7E-11 1.3E-15 98.4 9.0 90 132-223 17-110 (275)
81 2l6j_A TPR repeat-containing p 99.2 9.3E-12 3.2E-16 89.3 4.7 81 133-215 17-103 (111)
82 3qky_A Outer membrane assembly 99.2 7.7E-11 2.6E-15 98.1 10.7 89 134-223 29-130 (261)
83 3hym_B Cell division cycle pro 99.2 1.4E-10 4.7E-15 96.9 12.2 88 134-223 70-158 (330)
84 2ho1_A Type 4 fimbrial biogene 99.2 1.5E-10 5.3E-15 94.2 12.2 88 134-223 85-174 (252)
85 2pzi_A Probable serine/threoni 99.2 7.4E-11 2.5E-15 114.0 11.7 91 132-224 403-501 (681)
86 2vq2_A PILW, putative fimbrial 99.2 1.9E-10 6.7E-15 90.8 12.2 26 137-162 59-84 (225)
87 2vq2_A PILW, putative fimbrial 99.2 2.1E-10 7.2E-15 90.6 12.4 83 134-218 22-105 (225)
88 2y4t_A DNAJ homolog subfamily 99.2 1.6E-10 5.6E-15 101.6 12.9 88 134-223 40-127 (450)
89 2ho1_A Type 4 fimbrial biogene 99.2 2.9E-10 1E-14 92.5 13.4 88 134-223 155-242 (252)
90 2vsy_A XCC0866; transferase, g 99.2 2.1E-10 7.2E-15 106.7 14.1 88 134-223 71-161 (568)
91 3ieg_A DNAJ homolog subfamily 99.2 2.9E-10 9.8E-15 95.6 13.2 89 133-223 133-221 (359)
92 3hym_B Cell division cycle pro 99.2 1.7E-10 5.6E-15 96.4 11.5 87 135-223 106-192 (330)
93 1na3_A Designed protein CTPR2; 99.2 3.1E-10 1.1E-14 78.6 11.0 65 134-199 23-87 (91)
94 4gcn_A Protein STI-1; structur 99.2 9E-11 3.1E-15 89.4 8.7 69 153-223 7-75 (127)
95 2r5s_A Uncharacterized protein 99.2 2.3E-11 7.9E-16 96.4 5.4 88 134-223 20-141 (176)
96 2ond_A Cleavage stimulation fa 99.2 1E-10 3.6E-15 100.6 9.9 86 136-223 80-167 (308)
97 2y4t_A DNAJ homolog subfamily 99.2 3.2E-10 1.1E-14 99.7 12.9 88 134-223 271-362 (450)
98 3u4t_A TPR repeat-containing p 99.2 1.3E-10 4.5E-15 95.4 9.7 87 134-223 17-107 (272)
99 2ond_A Cleavage stimulation fa 99.2 2E-10 6.9E-15 98.8 11.3 86 137-223 33-132 (308)
100 1a17_A Serine/threonine protei 99.2 4.3E-10 1.5E-14 85.4 11.7 84 134-219 61-146 (166)
101 1na3_A Designed protein CTPR2; 99.1 2.9E-10 1E-14 78.7 9.8 70 152-223 7-76 (91)
102 2gw1_A Mitochondrial precursor 99.1 5.4E-10 1.9E-14 99.2 13.6 87 134-223 20-106 (514)
103 2yhc_A BAMD, UPF0169 lipoprote 99.1 2.9E-10 9.9E-15 93.6 10.8 89 134-223 18-129 (225)
104 2r5s_A Uncharacterized protein 99.1 3.7E-10 1.3E-14 89.3 10.7 79 138-218 92-172 (176)
105 3upv_A Heat shock protein STI1 99.1 3.3E-10 1.1E-14 84.1 9.8 71 151-223 1-71 (126)
106 2l6j_A TPR repeat-containing p 99.1 3.2E-10 1.1E-14 81.2 9.2 69 153-223 3-71 (111)
107 3qky_A Outer membrane assembly 99.1 4.7E-10 1.6E-14 93.3 11.5 88 134-223 66-181 (261)
108 3fp2_A TPR repeat-containing p 99.1 2.4E-10 8.1E-15 102.6 10.2 87 134-223 39-125 (537)
109 3mkr_A Coatomer subunit epsilo 99.1 1.1E-09 3.9E-14 94.7 13.4 89 134-223 144-233 (291)
110 4g1t_A Interferon-induced prot 99.1 1.1E-09 3.8E-14 97.3 13.5 89 134-223 65-171 (472)
111 2xpi_A Anaphase-promoting comp 99.1 9.4E-10 3.2E-14 100.5 13.2 88 134-223 489-583 (597)
112 3fp2_A TPR repeat-containing p 99.1 8.2E-10 2.8E-14 99.1 12.6 88 134-223 290-377 (537)
113 3q49_B STIP1 homology and U bo 99.1 1.2E-09 4E-14 81.2 11.2 74 148-223 3-76 (137)
114 1qqe_A Vesicular transport pro 99.1 2.2E-10 7.6E-15 98.2 8.2 88 134-223 132-232 (292)
115 2kck_A TPR repeat; tetratricop 99.1 3.3E-10 1.1E-14 80.1 7.6 72 149-222 1-72 (112)
116 1qqe_A Vesicular transport pro 99.1 4E-10 1.4E-14 96.6 9.5 88 134-223 91-191 (292)
117 2if4_A ATFKBP42; FKBP-like, al 99.1 7.5E-11 2.6E-15 104.5 4.9 89 134-223 244-332 (338)
118 3bee_A Putative YFRE protein; 99.1 8.5E-10 2.9E-14 81.8 9.9 72 150-223 2-76 (93)
119 3sz7_A HSC70 cochaperone (SGT) 99.1 7.7E-10 2.6E-14 86.1 9.9 72 150-223 7-78 (164)
120 1p5q_A FKBP52, FK506-binding p 99.1 1.2E-09 4.2E-14 96.4 12.0 83 134-218 210-293 (336)
121 2xpi_A Anaphase-promoting comp 99.0 2.4E-09 8.4E-14 97.7 13.1 87 134-222 387-473 (597)
122 3u64_A Protein TP_0956; tetrat 99.0 1.1E-09 3.8E-14 98.2 9.7 88 134-222 177-272 (301)
123 3qou_A Protein YBBN; thioredox 99.0 1.3E-09 4.6E-14 93.6 9.7 82 136-219 201-284 (287)
124 2gw1_A Mitochondrial precursor 99.0 1.1E-09 3.9E-14 97.2 9.1 88 134-223 386-482 (514)
125 1hxi_A PEX5, peroxisome target 99.0 3.5E-09 1.2E-13 80.0 10.2 66 156-223 19-84 (121)
126 1wao_1 Serine/threonine protei 99.0 2.6E-10 9E-15 106.0 4.6 88 134-223 54-154 (477)
127 3edt_B KLC 2, kinesin light ch 99.0 9.6E-10 3.3E-14 89.3 7.3 85 134-220 99-199 (283)
128 3nf1_A KLC 1, kinesin light ch 99.0 1.5E-09 5.2E-14 89.8 8.3 87 134-222 167-310 (311)
129 4g1t_A Interferon-induced prot 98.9 3.5E-09 1.2E-13 94.1 10.4 88 135-223 315-405 (472)
130 3edt_B KLC 2, kinesin light ch 98.9 2.2E-09 7.4E-14 87.2 7.7 84 134-219 57-156 (283)
131 2kc7_A BFR218_protein; tetratr 98.9 8.2E-09 2.8E-13 73.3 9.7 64 158-223 4-68 (99)
132 2lni_A Stress-induced-phosphop 98.9 7.6E-09 2.6E-13 75.3 9.7 69 133-202 63-131 (133)
133 2fbn_A 70 kDa peptidylprolyl i 98.9 4.8E-09 1.6E-13 84.0 9.3 83 134-218 102-185 (198)
134 3rjv_A Putative SEL1 repeat pr 98.9 5.7E-09 1.9E-13 85.7 9.8 87 133-221 102-199 (212)
135 2yhc_A BAMD, UPF0169 lipoprote 98.9 7.7E-09 2.6E-13 84.9 10.4 89 133-223 109-217 (225)
136 2vyi_A SGTA protein; chaperone 98.9 1.8E-08 6E-13 72.5 11.1 68 134-202 60-127 (131)
137 2ifu_A Gamma-SNAP; membrane fu 98.9 5.1E-09 1.8E-13 90.3 8.9 87 134-223 129-227 (307)
138 1ouv_A Conserved hypothetical 98.9 2.5E-08 8.7E-13 82.9 12.8 82 134-220 56-144 (273)
139 1pc2_A Mitochondria fission pr 98.9 1.1E-08 3.9E-13 83.4 10.0 88 134-223 12-104 (152)
140 3rkv_A Putative peptidylprolyl 98.9 2.7E-09 9.2E-14 82.8 6.0 65 134-199 77-142 (162)
141 1na0_A Designed protein CTPR3; 98.9 3E-08 1E-12 70.7 11.0 67 134-201 57-123 (125)
142 3ro2_A PINS homolog, G-protein 98.9 9E-09 3.1E-13 84.9 9.4 87 133-221 18-114 (338)
143 1zu2_A Mitochondrial import re 98.9 6.8E-09 2.3E-13 85.0 8.5 60 135-195 61-131 (158)
144 3k9i_A BH0479 protein; putativ 98.9 1.4E-08 4.7E-13 75.2 9.3 61 134-195 41-101 (117)
145 3u3w_A Transcriptional activat 98.8 4.1E-09 1.4E-13 89.8 7.2 85 134-219 169-266 (293)
146 4a1s_A PINS, partner of inscut 98.8 1.3E-08 4.4E-13 88.6 10.4 84 134-219 62-155 (411)
147 1ouv_A Conserved hypothetical 98.8 4E-08 1.4E-12 81.7 13.0 82 133-219 91-179 (273)
148 3ro3_A PINS homolog, G-protein 98.8 8.4E-09 2.9E-13 76.4 7.9 85 134-220 23-119 (164)
149 2qfc_A PLCR protein; TPR, HTH, 98.8 3.6E-08 1.2E-12 83.9 12.7 86 134-221 129-227 (293)
150 2dba_A Smooth muscle cell asso 98.8 2.1E-08 7.1E-13 74.5 9.5 75 147-223 21-98 (148)
151 2ooe_A Cleavage stimulation fa 98.8 1.7E-08 5.7E-13 92.9 10.8 86 137-223 255-354 (530)
152 3sf4_A G-protein-signaling mod 98.8 1.4E-08 4.6E-13 87.2 9.4 86 134-221 23-118 (406)
153 1elw_A TPR1-domain of HOP; HOP 98.8 3.4E-08 1.2E-12 69.9 10.0 64 134-198 52-115 (118)
154 3ro3_A PINS homolog, G-protein 98.8 2E-08 6.9E-13 74.3 8.9 86 134-221 63-160 (164)
155 3gw4_A Uncharacterized protein 98.8 1.1E-08 3.8E-13 80.2 7.8 84 134-219 40-136 (203)
156 3qww_A SET and MYND domain-con 98.8 2.4E-08 8.1E-13 92.9 11.2 84 134-219 312-411 (433)
157 2ooe_A Cleavage stimulation fa 98.8 1.8E-08 6.2E-13 92.7 10.2 88 134-222 335-423 (530)
158 3rjv_A Putative SEL1 repeat pr 98.8 1.9E-08 6.6E-13 82.5 9.2 84 133-219 66-158 (212)
159 3nf1_A KLC 1, kinesin light ch 98.8 7.6E-09 2.6E-13 85.5 6.5 87 133-221 124-226 (311)
160 1elr_A TPR2A-domain of HOP; HO 98.8 1.5E-08 5.2E-13 73.1 7.3 69 152-222 2-70 (131)
161 1kt0_A FKBP51, 51 kDa FK506-bi 98.8 1.4E-08 4.9E-13 93.4 8.8 76 134-211 331-406 (457)
162 3u3w_A Transcriptional activat 98.8 7.7E-09 2.6E-13 88.1 6.4 87 133-221 128-227 (293)
163 3ulq_A Response regulator aspa 98.8 2.2E-08 7.5E-13 87.7 9.4 85 134-220 198-294 (383)
164 1klx_A Cysteine rich protein B 98.8 1.4E-07 4.9E-12 73.0 12.9 82 134-220 39-127 (138)
165 2c2l_A CHIP, carboxy terminus 98.8 3.5E-08 1.2E-12 84.6 10.2 71 151-223 1-71 (281)
166 2qfc_A PLCR protein; TPR, HTH, 98.8 4.9E-08 1.7E-12 83.1 11.0 84 134-219 169-266 (293)
167 2ifu_A Gamma-SNAP; membrane fu 98.8 6.2E-09 2.1E-13 89.8 5.5 86 134-222 90-187 (307)
168 2hr2_A Hypothetical protein; a 98.7 3.4E-08 1.2E-12 80.9 9.0 68 154-223 11-97 (159)
169 3ly7_A Transcriptional activat 98.7 1.2E-07 4E-12 87.3 13.2 87 134-222 213-342 (372)
170 2xev_A YBGF; tetratricopeptide 98.7 4.7E-08 1.6E-12 71.6 8.4 67 155-223 3-72 (129)
171 3ma5_A Tetratricopeptide repea 98.7 5.3E-08 1.8E-12 70.7 8.5 65 134-199 21-87 (100)
172 1dce_A Protein (RAB geranylger 98.7 4.4E-08 1.5E-12 93.6 10.3 88 135-223 124-225 (567)
173 1ihg_A Cyclophilin 40; ppiase 98.7 2.4E-08 8.2E-13 90.0 7.9 76 134-211 287-362 (370)
174 3n71_A Histone lysine methyltr 98.7 3.5E-08 1.2E-12 93.1 9.4 86 132-219 321-422 (490)
175 3q15_A PSP28, response regulat 98.7 4.4E-08 1.5E-12 86.0 9.1 87 134-222 196-293 (378)
176 3ro2_A PINS homolog, G-protein 98.7 4.5E-08 1.6E-12 80.6 8.0 87 134-222 237-335 (338)
177 3ulq_A Response regulator aspa 98.7 1.9E-08 6.6E-13 88.0 5.9 86 134-221 117-215 (383)
178 3dra_A Protein farnesyltransfe 98.7 1.5E-07 5E-12 83.8 11.5 90 134-224 47-144 (306)
179 1dce_A Protein (RAB geranylger 98.7 1.1E-07 3.8E-12 90.8 11.2 87 136-223 89-177 (567)
180 3sf4_A G-protein-signaling mod 98.7 7E-08 2.4E-12 82.7 8.9 85 134-220 241-337 (406)
181 3gw4_A Uncharacterized protein 98.6 6.9E-08 2.4E-12 75.6 7.7 85 134-220 80-177 (203)
182 2kat_A Uncharacterized protein 98.6 1.7E-07 5.9E-12 68.4 9.2 64 134-198 33-98 (115)
183 4a1s_A PINS, partner of inscut 98.6 3E-08 1E-12 86.2 5.4 85 134-220 237-333 (411)
184 3dss_A Geranylgeranyl transfer 98.6 3.7E-07 1.3E-11 82.4 12.5 88 135-223 125-226 (331)
185 3qwp_A SET and MYND domain-con 98.6 9.9E-08 3.4E-12 88.3 8.2 85 133-219 300-400 (429)
186 3q7a_A Farnesyltransferase alp 98.6 4.6E-07 1.6E-11 82.5 11.7 90 134-224 68-159 (349)
187 4f3v_A ESX-1 secretion system 98.5 2.2E-07 7.7E-12 82.3 8.4 87 134-222 149-240 (282)
188 3dra_A Protein farnesyltransfe 98.5 5.7E-07 1.9E-11 80.0 10.8 88 134-223 124-219 (306)
189 1hz4_A MALT regulatory protein 98.5 2.5E-07 8.4E-12 80.1 8.2 86 134-221 67-166 (373)
190 2v5f_A Prolyl 4-hydroxylase su 98.5 8E-07 2.7E-11 65.7 9.7 62 134-196 19-87 (104)
191 2xm6_A Protein corresponding t 98.5 7.5E-07 2.6E-11 81.1 11.4 83 134-221 345-434 (490)
192 2v5f_A Prolyl 4-hydroxylase su 98.5 1E-06 3.6E-11 65.1 10.1 69 153-223 4-79 (104)
193 1hz4_A MALT regulatory protein 98.5 6.9E-07 2.4E-11 77.3 10.5 87 133-221 106-205 (373)
194 3q15_A PSP28, response regulat 98.5 2.1E-07 7.3E-12 81.5 7.1 84 134-219 115-211 (378)
195 3dss_A Geranylgeranyl transfer 98.5 2.2E-06 7.5E-11 77.4 13.6 86 136-223 90-178 (331)
196 3e4b_A ALGK; tetratricopeptide 98.4 7.4E-07 2.5E-11 81.5 9.0 81 135-219 194-280 (452)
197 1klx_A Cysteine rich protein B 98.4 1.5E-06 5E-11 67.2 9.3 79 134-219 9-90 (138)
198 3e4b_A ALGK; tetratricopeptide 98.4 1.1E-06 3.9E-11 80.3 9.1 79 134-217 231-314 (452)
199 3bee_A Putative YFRE protein; 98.3 1.8E-06 6.1E-11 63.7 7.7 55 135-190 24-78 (93)
200 2xm6_A Protein corresponding t 98.3 6.8E-06 2.3E-10 74.7 12.7 81 134-219 57-144 (490)
201 3q7a_A Farnesyltransferase alp 98.2 4.5E-06 1.6E-10 75.9 9.8 88 135-223 104-200 (349)
202 3n71_A Histone lysine methyltr 98.1 4.7E-06 1.6E-10 78.6 7.8 85 133-219 364-464 (490)
203 4f3v_A ESX-1 secretion system 98.1 1.8E-06 6.2E-11 76.5 4.1 84 134-220 116-201 (282)
204 1nzn_A CGI-135 protein, fissio 98.1 1.8E-05 6.2E-10 62.5 9.4 87 135-223 16-107 (126)
205 1pc2_A Mitochondria fission pr 98.1 7.3E-06 2.5E-10 66.7 7.3 62 134-196 49-112 (152)
206 3u64_A Protein TP_0956; tetrat 97.9 8.3E-06 2.8E-10 73.1 4.9 56 133-188 217-273 (301)
207 4e6h_A MRNA 3'-END-processing 97.9 5.8E-05 2E-09 73.9 11.1 82 136-219 325-407 (679)
208 3mv2_B Coatomer subunit epsilo 97.8 4.4E-05 1.5E-09 68.4 7.1 83 134-223 192-286 (310)
209 4b4t_Q 26S proteasome regulato 97.7 7.9E-05 2.7E-09 65.1 8.1 87 133-221 108-206 (434)
210 4e6h_A MRNA 3'-END-processing 97.6 0.00016 5.3E-09 70.8 9.6 88 134-223 484-574 (679)
211 1xi4_A Clathrin heavy chain; a 97.6 0.00021 7.3E-09 75.4 10.1 65 151-222 1102-1166(1630)
212 3mv2_B Coatomer subunit epsilo 97.6 0.00018 6.3E-09 64.4 8.0 81 139-221 85-167 (310)
213 3ly7_A Transcriptional activat 97.5 0.00027 9.3E-09 64.9 8.8 57 133-191 290-346 (372)
214 3qww_A SET and MYND domain-con 97.4 0.00036 1.2E-08 64.6 8.3 60 134-194 354-426 (433)
215 4b4t_Q 26S proteasome regulato 97.4 0.0004 1.4E-08 60.6 8.0 84 134-219 149-245 (434)
216 1zbp_A Hypothetical protein VP 97.3 0.0028 9.5E-08 56.0 12.7 90 132-222 9-132 (273)
217 3qwp_A SET and MYND domain-con 97.2 0.00071 2.4E-08 62.4 8.1 60 134-194 343-415 (429)
218 2uy1_A Cleavage stimulation fa 97.2 0.0023 7.7E-08 59.7 11.5 60 136-197 195-254 (493)
219 1y8m_A FIS1; mitochondria, unk 97.2 0.0011 3.9E-08 53.3 7.7 87 134-223 20-110 (144)
220 3o48_A Mitochondria fission 1 97.1 0.0014 5E-08 52.1 7.3 86 135-223 22-111 (134)
221 1nzn_A CGI-135 protein, fissio 97.1 0.00098 3.4E-08 52.5 6.0 62 134-196 52-115 (126)
222 4h7y_A Dual specificity protei 96.9 0.0043 1.5E-07 50.7 9.0 84 136-222 35-126 (161)
223 3ffl_A Anaphase-promoting comp 96.9 0.0041 1.4E-07 51.2 8.6 80 134-215 34-147 (167)
224 1xi4_A Clathrin heavy chain; a 96.8 0.0029 9.9E-08 67.0 8.6 81 133-223 1208-1313(1630)
225 3o48_A Mitochondria fission 1 96.8 0.0041 1.4E-07 49.5 7.4 62 134-196 57-119 (134)
226 2uy1_A Cleavage stimulation fa 96.7 0.011 3.9E-07 54.9 11.6 87 134-223 227-353 (493)
227 1y8m_A FIS1; mitochondria, unk 96.7 0.0061 2.1E-07 49.0 8.3 62 134-196 56-118 (144)
228 1b89_A Protein (clathrin heavy 96.6 0.0088 3E-07 56.1 9.4 79 134-223 162-240 (449)
229 1b89_A Protein (clathrin heavy 96.1 0.00088 3E-08 62.9 0.0 75 133-219 16-90 (449)
230 1ya0_A SMG-7 transcript varian 95.9 0.022 7.4E-07 53.9 8.6 66 134-200 166-231 (497)
231 4h7y_A Dual specificity protei 95.8 0.016 5.3E-07 47.4 6.1 59 134-193 74-132 (161)
232 2ff4_A Probable regulatory pro 94.9 0.29 1E-05 44.1 12.1 57 160-218 177-233 (388)
233 4gns_B Protein CSD3, chitin bi 94.4 0.12 4.2E-06 51.2 9.0 58 155-214 338-395 (754)
234 1ya0_A SMG-7 transcript varian 94.2 0.15 5.1E-06 48.2 8.7 62 156-219 154-215 (497)
235 3ffl_A Anaphase-promoting comp 93.9 0.097 3.3E-06 42.9 5.9 61 157-219 23-92 (167)
236 1zbp_A Hypothetical protein VP 93.7 0.18 6.1E-06 44.4 7.5 55 167-222 9-63 (273)
237 4g26_A Pentatricopeptide repea 93.2 1.4 4.7E-05 41.0 13.3 48 134-183 119-168 (501)
238 3mkq_A Coatomer beta'-subunit; 92.9 0.49 1.7E-05 44.4 9.7 31 150-181 677-707 (814)
239 4g26_A Pentatricopeptide repea 92.3 1.8 6.3E-05 40.1 12.7 83 133-218 83-168 (501)
240 2ff4_A Probable regulatory pro 89.7 0.83 2.8E-05 41.0 7.5 49 134-183 185-233 (388)
241 2br9_A 14-3-3E, 14-3-3 protein 89.4 0.84 2.9E-05 39.1 6.9 48 136-183 146-201 (234)
242 3iqu_A 14-3-3 protein sigma; s 89.0 0.92 3.1E-05 39.0 6.8 48 136-183 149-204 (236)
243 2npm_A 14-3-3 domain containin 88.8 0.95 3.2E-05 39.5 6.9 48 136-183 172-226 (260)
244 3uzd_A 14-3-3 protein gamma; s 88.4 1.1 3.6E-05 38.9 6.9 48 136-183 147-202 (248)
245 1o9d_A 14-3-3-like protein C; 88.2 1.1 3.7E-05 39.1 6.9 48 136-183 151-206 (260)
246 3kae_A CDC27, possible protein 87.7 5.9 0.0002 33.3 10.6 66 154-221 62-145 (242)
247 3mkq_B Coatomer subunit alpha; 87.4 3.1 0.00011 34.1 8.8 43 134-182 19-61 (177)
248 3ubw_A 14-3-3E, 14-3-3 protein 87.4 1.5 5.2E-05 38.2 7.2 48 136-183 172-227 (261)
249 2o8p_A 14-3-3 domain containin 85.5 4.9 0.00017 34.3 9.3 49 136-184 141-197 (227)
250 3efz_A 14-3-3 protein; 14-3-3, 85.4 1.1 3.8E-05 39.2 5.4 49 136-184 168-226 (268)
251 4gns_B Protein CSD3, chitin bi 84.6 2 6.9E-05 42.6 7.4 48 133-181 350-397 (754)
252 4b4t_R RPN7, 26S proteasome re 81.3 3.6 0.00012 37.3 7.3 84 134-219 145-237 (429)
253 3txn_A 26S proteasome regulato 79.4 6.6 0.00023 35.8 8.3 84 134-218 113-209 (394)
254 3mkq_B Coatomer subunit alpha; 78.5 10 0.00034 31.0 8.4 55 152-216 6-60 (177)
255 1qsa_A Protein (soluble lytic 78.1 6.8 0.00023 37.7 8.3 80 136-218 268-347 (618)
256 2v6y_A AAA family ATPase, P60 76.3 4.8 0.00016 28.7 5.2 19 166-184 22-40 (83)
257 4b4t_P 26S proteasome regulato 75.8 36 0.0012 30.9 12.3 83 134-218 151-246 (445)
258 2w2u_A Hypothetical P60 katani 75.7 5.1 0.00017 28.7 5.2 19 166-184 30-48 (83)
259 2v6y_A AAA family ATPase, P60 74.2 6.3 0.00021 28.0 5.3 45 136-189 8-52 (83)
260 2w2u_A Hypothetical P60 katani 73.1 6.9 0.00024 28.0 5.3 45 136-189 16-60 (83)
261 3spa_A Mtrpol, DNA-directed RN 72.4 47 0.0016 34.5 13.0 82 134-218 141-229 (1134)
262 2o8p_A 14-3-3 domain containin 72.0 12 0.00042 31.8 7.5 52 168-219 138-197 (227)
263 3esl_A Checkpoint serine/threo 71.8 18 0.00063 30.2 8.4 76 141-219 58-144 (202)
264 3mkq_A Coatomer beta'-subunit; 71.8 21 0.00072 33.2 9.8 13 134-146 695-707 (814)
265 2br9_A 14-3-3E, 14-3-3 protein 70.6 13 0.00043 31.8 7.3 47 172-218 147-201 (234)
266 3iqu_A 14-3-3 protein sigma; s 69.3 14 0.00047 31.6 7.2 48 171-218 149-204 (236)
267 2npm_A 14-3-3 domain containin 69.1 14 0.00047 32.1 7.3 47 172-218 173-226 (260)
268 4b4t_S RPN3, 26S proteasome re 68.6 6.1 0.00021 37.6 5.3 60 160-223 237-303 (523)
269 1o9d_A 14-3-3-like protein C; 67.8 15 0.00052 31.8 7.3 47 172-218 152-206 (260)
270 3uzd_A 14-3-3 protein gamma; s 67.7 15 0.00053 31.6 7.3 47 172-218 148-202 (248)
271 4a5x_A MITD1, MIT domain-conta 66.3 9.4 0.00032 27.4 4.8 19 166-184 27-45 (86)
272 1wfd_A Hypothetical protein 15 66.3 11 0.00036 27.4 5.2 34 135-184 11-44 (93)
273 2cpt_A SKD1 protein, vacuolar 64.9 10 0.00036 28.7 5.1 34 135-184 14-47 (117)
274 4a5x_A MITD1, MIT domain-conta 64.6 12 0.00042 26.8 5.2 46 135-189 12-57 (86)
275 3ubw_A 14-3-3E, 14-3-3 protein 64.1 20 0.00068 31.1 7.3 47 172-218 173-227 (261)
276 1wfd_A Hypothetical protein 15 64.0 13 0.00045 26.8 5.3 16 132-147 27-42 (93)
277 3kae_A CDC27, possible protein 62.6 36 0.0012 28.6 8.2 58 134-192 76-151 (242)
278 2v6x_A Vacuolar protein sortin 62.2 15 0.0005 25.9 5.2 34 135-184 9-42 (85)
279 2wpv_A GET4, UPF0363 protein Y 62.1 15 0.00052 32.4 6.4 65 152-217 132-215 (312)
280 2cfu_A SDSA1; SDS-hydrolase, l 61.0 39 0.0013 32.4 9.5 49 153-202 448-496 (658)
281 2v6x_A Vacuolar protein sortin 59.1 19 0.00065 25.3 5.3 14 134-147 27-40 (85)
282 4fhn_B Nucleoporin NUP120; pro 58.9 52 0.0018 33.4 10.5 74 146-221 834-930 (1139)
283 4gq2_M Nucleoporin NUP120; bet 58.3 47 0.0016 33.3 9.8 75 144-220 830-927 (950)
284 2cpt_A SKD1 protein, vacuolar 58.1 57 0.0019 24.5 10.2 13 134-146 32-44 (117)
285 3efz_A 14-3-3 protein; 14-3-3, 57.7 17 0.00059 31.7 5.8 49 171-219 168-226 (268)
286 4b4t_R RPN7, 26S proteasome re 57.1 11 0.00039 34.0 4.8 83 135-219 109-197 (429)
287 3ax2_A Mitochondrial import re 56.2 49 0.0017 23.1 7.1 36 159-195 22-57 (73)
288 4b4t_S RPN3, 26S proteasome re 55.7 7.5 0.00026 37.0 3.4 53 134-189 245-304 (523)
289 3re2_A Predicted protein; meni 54.1 46 0.0016 30.8 8.1 64 153-218 254-324 (472)
290 1wy6_A Hypothetical protein ST 53.3 45 0.0015 26.9 7.0 84 129-218 70-153 (172)
291 2ijq_A Hypothetical protein; s 52.8 72 0.0025 25.5 8.3 56 162-218 40-103 (161)
292 3esl_A Checkpoint serine/threo 50.8 86 0.0029 26.0 8.8 57 135-192 94-152 (202)
293 2ca5_A MXIH; transport protein 49.9 22 0.00077 25.8 4.3 30 170-199 25-54 (85)
294 3t5x_A PCI domain-containing p 48.1 45 0.0015 27.1 6.6 34 155-189 15-48 (203)
295 1om2_A Protein (mitochondrial 46.4 60 0.0021 23.8 6.4 51 134-196 11-61 (95)
296 3u84_A Menin; MLL, JUND, ledgf 46.3 68 0.0023 30.2 8.0 63 153-218 276-346 (550)
297 1wy6_A Hypothetical protein ST 46.0 1.1E+02 0.0039 24.6 8.3 51 134-185 105-155 (172)
298 3lpz_A GET4 (YOR164C homolog); 44.3 74 0.0025 28.4 7.8 67 150-217 132-214 (336)
299 4a1g_A Mitotic checkpoint seri 43.0 48 0.0017 26.2 5.8 45 174-219 84-130 (152)
300 2wvi_A Mitotic checkpoint seri 42.5 93 0.0032 24.8 7.5 35 154-189 96-130 (164)
301 4gq4_A Menin; tumor suppressor 41.4 92 0.0031 29.2 8.1 65 152-218 260-331 (489)
302 4fhn_B Nucleoporin NUP120; pro 41.4 42 0.0015 34.1 6.5 78 134-213 856-961 (1139)
303 2cwy_A Hypothetical protein TT 41.1 97 0.0033 22.2 6.9 55 161-218 8-67 (94)
304 3txn_A 26S proteasome regulato 37.6 1E+02 0.0035 27.8 7.8 82 136-219 75-168 (394)
305 1qsa_A Protein (soluble lytic 37.3 32 0.0011 33.0 4.6 49 134-183 299-347 (618)
306 4aez_C MAD3, mitotic spindle c 37.0 1.6E+02 0.0056 24.6 8.5 31 187-218 148-178 (223)
307 2dl1_A Spartin; SPG20, MIT, st 33.8 29 0.001 26.5 3.0 16 168-183 35-50 (116)
308 4aez_C MAD3, mitotic spindle c 33.5 75 0.0026 26.7 5.8 53 138-191 132-186 (223)
309 3k66_A Beta-amyloid-like prote 31.3 1E+02 0.0035 26.3 6.3 51 171-221 103-156 (239)
310 2rpa_A Katanin P60 ATPase-cont 30.6 46 0.0016 23.5 3.4 25 159-184 17-41 (78)
311 2crb_A Nuclear receptor bindin 30.0 86 0.0029 23.2 4.8 34 160-195 21-61 (97)
312 2wvi_A Mitotic checkpoint seri 28.2 2.2E+02 0.0077 22.5 9.1 71 142-220 45-126 (164)
313 3o10_A Sacsin; all-helical dom 27.6 92 0.0031 23.8 5.0 16 132-147 2-17 (141)
314 3lew_A SUSD-like carbohydrate 27.2 1.7E+02 0.0059 26.6 7.7 48 136-184 174-232 (495)
315 3ax2_A Mitochondrial import re 25.8 93 0.0032 21.6 4.3 26 134-159 31-56 (73)
316 3kez_A Putative sugar binding 24.2 2.1E+02 0.0071 25.7 7.5 48 136-184 170-225 (461)
317 3myv_A SUSD superfamily protei 24.2 1.7E+02 0.0059 26.2 7.0 48 136-184 164-219 (454)
318 3spa_A Mtrpol, DNA-directed RN 24.1 3.2E+02 0.011 28.5 9.4 60 156-218 129-193 (1134)
319 2g0u_A Type III secretion syst 23.9 2.1E+02 0.0073 20.8 6.1 18 180-197 41-58 (92)
320 4a1g_A Mitotic checkpoint seri 23.8 2.6E+02 0.009 21.8 8.4 54 139-193 84-139 (152)
321 2crb_A Nuclear receptor bindin 23.5 1.3E+02 0.0045 22.2 4.8 16 203-218 28-43 (97)
322 3re2_A Predicted protein; meni 22.8 1.8E+02 0.0061 26.9 6.6 47 137-184 274-325 (472)
323 3t5v_B Nuclear mRNA export pro 22.5 1.1E+02 0.0037 28.3 5.3 87 134-222 140-253 (455)
324 2dl1_A Spartin; SPG20, MIT, st 21.8 1.9E+02 0.0064 22.0 5.6 45 134-187 17-61 (116)
325 3u84_A Menin; MLL, JUND, ledgf 21.2 2E+02 0.0067 27.1 6.6 46 138-184 297-347 (550)
326 3lew_A SUSD-like carbohydrate 20.7 2.6E+02 0.009 25.3 7.5 30 189-219 203-232 (495)
327 3snx_A SUSD homolog, putative 20.3 44 0.0015 30.4 2.1 58 160-218 156-219 (460)
No 1
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.71 E-value=1.7e-16 Score=121.81 Aligned_cols=89 Identities=18% Similarity=0.218 Sum_probs=84.6
Q ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHH
Q 027404 133 GKESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSY 212 (224)
Q Consensus 133 ~~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~ 212 (224)
.+++++|+.+|++||+++|.++.+++++|.++. .+|++++|+.+|++||+++|+++.+|.++|.++.. .+++++|+.+
T Consensus 26 ~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~-~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~-~~~~~~A~~~ 103 (126)
T 4gco_A 26 KGDYPTAMRHYNEAVKRDPENAILYSNRAACLT-KLMEFQRALDDCDTCIRLDSKFIKGYIRKAACLVA-MREWSKAQRA 103 (126)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHH-hhccHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHH-CCCHHHHHHH
Confidence 379999999999999999999999999999987 69999999999999999999999999999998876 5799999999
Q ss_pred HHHHHHhCCCC
Q 027404 213 FDRAVHSAPDD 223 (224)
Q Consensus 213 ferAL~l~P~d 223 (224)
|++|++++|++
T Consensus 104 ~~~al~l~P~~ 114 (126)
T 4gco_A 104 YEDALQVDPSN 114 (126)
T ss_dssp HHHHHHHCTTC
T ss_pred HHHHHHHCcCC
Confidence 99999999986
No 2
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.67 E-value=7.2e-16 Score=123.51 Aligned_cols=88 Identities=16% Similarity=0.176 Sum_probs=83.7
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~f 213 (224)
+++++|+.+|++|++++|+++.+|+++|.++. .+|++++|+.+|++|++++|+++.+|+++|.++.. .|++++|+.+|
T Consensus 50 g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~-~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~~~-lg~~~eA~~~~ 127 (151)
T 3gyz_A 50 GRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQ-IKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLR-LKAPLKAKECF 127 (151)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HHccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 79999999999999999999999999999987 69999999999999999999999999999998876 58999999999
Q ss_pred HHHHHhCCCC
Q 027404 214 DRAVHSAPDD 223 (224)
Q Consensus 214 erAL~l~P~d 223 (224)
++|++++|+.
T Consensus 128 ~~al~l~~~~ 137 (151)
T 3gyz_A 128 ELVIQHSNDE 137 (151)
T ss_dssp HHHHHHCCCH
T ss_pred HHHHHhCCCH
Confidence 9999999973
No 3
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.62 E-value=4.7e-15 Score=116.35 Aligned_cols=88 Identities=17% Similarity=0.204 Sum_probs=80.0
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHH-H
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKS-Y 212 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~-~ 212 (224)
+++++|+.+|++||+++|+++.+|+++|.++. ..|++++|+.+|++|++++|+++.++.++|.++... +++++|.. +
T Consensus 45 ~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~-~~~~~aa~~~ 122 (150)
T 4ga2_A 45 KEYDLAKKYICTYINVQERDPKAHRFLGLLYE-LEENTDKAVECYRRSVELNPTQKDLVLKIAELLCKN-DVTDGRAKYW 122 (150)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-CSSSSHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-CChHHHHHHH
Confidence 78999999999999999999999999999987 699999999999999999999999999999988765 56766555 5
Q ss_pred HHHHHHhCCCC
Q 027404 213 FDRAVHSAPDD 223 (224)
Q Consensus 213 ferAL~l~P~d 223 (224)
+++|++++|++
T Consensus 123 ~~~al~l~P~~ 133 (150)
T 4ga2_A 123 VERAAKLFPGS 133 (150)
T ss_dssp HHHHHHHSTTC
T ss_pred HHHHHHhCcCC
Confidence 69999999986
No 4
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.62 E-value=2.7e-15 Score=114.18 Aligned_cols=88 Identities=13% Similarity=-0.025 Sum_probs=79.3
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~f 213 (224)
+++++|+.+|++||+.+|+++.+|+++|.++. ..|++++|+.+|++|++++|+++.++..+|.++.. .|++++|+.+|
T Consensus 31 g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~-~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~-~g~~~~A~~~~ 108 (121)
T 1hxi_A 31 ANLAEAALAFEAVCQKEPEREEAWRSLGLTQA-ENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN-EHNANAALASL 108 (121)
T ss_dssp TCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 79999999999999999999999999999987 69999999999999999999999999999998876 47899999999
Q ss_pred HHHHHhCCCC
Q 027404 214 DRAVHSAPDD 223 (224)
Q Consensus 214 erAL~l~P~d 223 (224)
+++++++|++
T Consensus 109 ~~al~~~P~~ 118 (121)
T 1hxi_A 109 RAWLLSQPQY 118 (121)
T ss_dssp HHHHC-----
T ss_pred HHHHHhCcCC
Confidence 9999999975
No 5
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.61 E-value=8.4e-15 Score=114.64 Aligned_cols=88 Identities=20% Similarity=0.231 Sum_probs=84.0
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~f 213 (224)
+++++|+.+|++||+++|+++.+++++|.++. ..|++++|+.+|++|++++|+++.+|.++|.++.. .+++++|+.+|
T Consensus 25 g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~ 102 (164)
T 3sz7_A 25 KEYSKAIDLYTQALSIAPANPIYLSNRAAAYS-ASGQHEKAAEDAELATVVDPKYSKAWSRLGLARFD-MADYKGAKEAY 102 (164)
T ss_dssp TCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-ccCHHHHHHHH
Confidence 78999999999999999999999999999987 69999999999999999999999999999998876 57999999999
Q ss_pred HHHHHhCCCC
Q 027404 214 DRAVHSAPDD 223 (224)
Q Consensus 214 erAL~l~P~d 223 (224)
+++++++|++
T Consensus 103 ~~al~~~p~~ 112 (164)
T 3sz7_A 103 EKGIEAEGNG 112 (164)
T ss_dssp HHHHHHHSSS
T ss_pred HHHHHhCCCc
Confidence 9999999986
No 6
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.61 E-value=7.1e-15 Score=115.50 Aligned_cols=88 Identities=9% Similarity=-0.009 Sum_probs=83.5
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~f 213 (224)
+++++|+.+|+++++.+|+++.+|+++|.++. ..|++++|+.+|++|+.++|+++.+++++|.++.. .|++++|+.+|
T Consensus 35 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~-~g~~~~A~~~~ 112 (148)
T 2vgx_A 35 GXYEDAHXVFQALCVLDHYDSRFFLGLGACRQ-AMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQ-XGELAEAESGL 112 (148)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CChHHHHHHHHHHHHcCcccHHHHHHHHHHHH-HHhhHHHHHHHHHHHHhcCCCCchHHHHHHHHHHH-cCCHHHHHHHH
Confidence 78999999999999999999999999999987 69999999999999999999999999999998876 58999999999
Q ss_pred HHHHHhCCCC
Q 027404 214 DRAVHSAPDD 223 (224)
Q Consensus 214 erAL~l~P~d 223 (224)
+++++++|++
T Consensus 113 ~~al~~~p~~ 122 (148)
T 2vgx_A 113 FLAQELIANX 122 (148)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHCcCC
Confidence 9999999874
No 7
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.61 E-value=6.2e-15 Score=113.52 Aligned_cols=88 Identities=14% Similarity=-0.001 Sum_probs=83.5
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~f 213 (224)
+++++|+.+|+++++.+|+++.+|+++|.++. ..|++++|+.+|++|+.++|+++.++.++|.++.. .|++++|+.+|
T Consensus 32 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~ 109 (142)
T 2xcb_A 32 GKWDDAQKIFQALCMLDHYDARYFLGLGACRQ-SLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQ-LGDLDGAESGF 109 (142)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 79999999999999999999999999999987 69999999999999999999999999999998876 58999999999
Q ss_pred HHHHHhCCCC
Q 027404 214 DRAVHSAPDD 223 (224)
Q Consensus 214 erAL~l~P~d 223 (224)
+++++++|++
T Consensus 110 ~~al~~~p~~ 119 (142)
T 2xcb_A 110 YSARALAAAQ 119 (142)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHhCCCC
Confidence 9999999865
No 8
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.61 E-value=1e-14 Score=108.94 Aligned_cols=86 Identities=26% Similarity=0.161 Sum_probs=81.8
Q ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHH
Q 027404 133 GKESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSY 212 (224)
Q Consensus 133 ~~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~ 212 (224)
.+++++|+.+|++||+.+|+++.+++++|.++. ..|++++|+.+|++|++++|+++.++..+|.++.. .+++++|+.+
T Consensus 17 ~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~~~~~~A~~~ 94 (126)
T 3upv_A 17 KSDWPNAVKAYTEMIKRAPEDARGYSNRAAALA-KLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIA-VKEYASALET 94 (126)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-HhCHHHHHHH
Confidence 378999999999999999999999999999987 69999999999999999999999999999998876 5799999999
Q ss_pred HHHHHHhC
Q 027404 213 FDRAVHSA 220 (224)
Q Consensus 213 ferAL~l~ 220 (224)
|+++++++
T Consensus 95 ~~~al~~~ 102 (126)
T 3upv_A 95 LDAARTKD 102 (126)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhC
Confidence 99999999
No 9
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.60 E-value=2.7e-15 Score=123.27 Aligned_cols=89 Identities=20% Similarity=0.199 Sum_probs=81.5
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGD----------FVKAEEYCGRAILAKPGDGNVLSMYGDLIWINH 203 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd----------~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~ 203 (224)
+.+++|+..|++|++++|+++++|+++|.++. ..++ +++|+.+|++||+++|+++.+|+++|.++..+.
T Consensus 16 ~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~-~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~lg 94 (158)
T 1zu2_A 16 LLFEQIRQDAENTYKSNPLDADNLTRWGGVLL-ELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSFA 94 (158)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHhc
Confidence 57899999999999999999999999999887 4665 469999999999999999999999999997653
Q ss_pred ----------CChHHHHHHHHHHHHhCCCC
Q 027404 204 ----------KDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 204 ----------gd~eeA~~~ferAL~l~P~d 223 (224)
+++++|+.+|++|++++|++
T Consensus 95 ~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~ 124 (158)
T 1zu2_A 95 FLTPDETEAKHNFDLATQFFQQAVDEQPDN 124 (158)
T ss_dssp HHCCCHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred ccCcchhhhhccHHHHHHHHHHHHHhCCCC
Confidence 58999999999999999986
No 10
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.59 E-value=1.3e-14 Score=111.10 Aligned_cols=88 Identities=20% Similarity=0.303 Sum_probs=79.8
Q ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-------HHHHHHHHHHHHHcCC
Q 027404 133 GKESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDG-------NVLSMYGDLIWINHKD 205 (224)
Q Consensus 133 ~~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da-------~al~~lG~ll~~~~gd 205 (224)
.+++++|+.+|++||+++|+++.++.++|.++. .+|++++|+++|++||+++|++. .++.++|.++.. .++
T Consensus 21 ~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~lg~~~~~-~~~ 98 (127)
T 4gcn_A 21 QKDFEKAHVHYDKAIELDPSNITFYNNKAAVYF-EEKKFAECVQFCEKAVEVGRETRADYKLIAKAMSRAGNAFQK-QND 98 (127)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH-TTC
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHH-HhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHHHHHHHHH-cCC
Confidence 379999999999999999999999999999987 69999999999999999998763 577888887765 579
Q ss_pred hHHHHHHHHHHHHhCCC
Q 027404 206 APRAKSYFDRAVHSAPD 222 (224)
Q Consensus 206 ~eeA~~~ferAL~l~P~ 222 (224)
+++|+.+|++|+.+.|+
T Consensus 99 ~~~A~~~~~kal~~~~~ 115 (127)
T 4gcn_A 99 LSLAVQWFHRSLSEFRD 115 (127)
T ss_dssp HHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHhhCcC
Confidence 99999999999999886
No 11
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.56 E-value=4.3e-15 Score=110.83 Aligned_cols=89 Identities=13% Similarity=0.174 Sum_probs=80.2
Q ss_pred CCCHHHHHHHHHHHHHH---CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHH
Q 027404 133 GKESESMDVYYQEMIKA---YPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRA 209 (224)
Q Consensus 133 ~~d~e~A~~~yerALe~---dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA 209 (224)
.+++++|+.+|++||++ +|+++.+++++|.++. .+|++++|+.+|++|++++|+++.++.++|.++.. .|++++|
T Consensus 3 ~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A 80 (117)
T 3k9i_A 3 LGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFR-TLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYN-LGRYEQG 80 (117)
T ss_dssp ----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH-cCCHHHH
Confidence 46889999999999999 6999999999999987 69999999999999999999999999999998876 5789999
Q ss_pred HHHHHHHHHhCCCC
Q 027404 210 KSYFDRAVHSAPDD 223 (224)
Q Consensus 210 ~~~ferAL~l~P~d 223 (224)
+.+|++++++.|++
T Consensus 81 ~~~~~~al~~~p~~ 94 (117)
T 3k9i_A 81 VELLLKIIAETSDD 94 (117)
T ss_dssp HHHHHHHHHHHCCC
T ss_pred HHHHHHHHHhCCCc
Confidence 99999999999975
No 12
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.55 E-value=3.6e-14 Score=116.31 Aligned_cols=89 Identities=11% Similarity=0.161 Sum_probs=84.0
Q ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHH----------------HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 027404 133 GKESESMDVYYQEMIKAYPEDALVLAN----------------YAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYG 196 (224)
Q Consensus 133 ~~d~e~A~~~yerALe~dP~na~~l~n----------------lA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG 196 (224)
.+++++|+.+|+++++.+|+++.+++. +|.++. ..|++++|+.+|++|++++|+++.++..+|
T Consensus 17 ~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~lg 95 (208)
T 3urz_A 17 AGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYK-KNRNYDKAYLFYKELLQKAPNNVDCLEACA 95 (208)
T ss_dssp TTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 378999999999999999999999999 999987 699999999999999999999999999999
Q ss_pred HHHHHHcCChHHHHHHHHHHHHhCCCC
Q 027404 197 DLIWINHKDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 197 ~ll~~~~gd~eeA~~~ferAL~l~P~d 223 (224)
.++.. .|++++|+.+|+++++++|++
T Consensus 96 ~~~~~-~g~~~~A~~~~~~al~~~P~~ 121 (208)
T 3urz_A 96 EMQVC-RGQEKDALRMYEKILQLEADN 121 (208)
T ss_dssp HHHHH-HTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHH-cCCHHHHHHHHHHHHHcCCCC
Confidence 98876 578999999999999999986
No 13
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.54 E-value=2.2e-14 Score=117.87 Aligned_cols=88 Identities=14% Similarity=0.065 Sum_probs=81.8
Q ss_pred CCHHHHHHHHHHHHHHCCC-------CHH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-------CCCCHHHH--
Q 027404 134 KESESMDVYYQEMIKAYPE-------DAL-----VLANYAKFLKEIRGDFVKAEEYCGRAILA-------KPGDGNVL-- 192 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~-------na~-----~l~nlA~~l~e~~Gd~eeAe~~~erAL~l-------dP~da~al-- 192 (224)
+++++|+.+|++||+++|+ +.. +|.|.|.++. ..|++++|+.+|++||++ +|+++.+|
T Consensus 25 g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~-~Lgr~~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~ 103 (159)
T 2hr2_A 25 GEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALA-GLRSFDEALHSADKALHYFNRRGELNQDEGKLWIS 103 (159)
T ss_dssp TCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHCCTTSTHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHhhhccccCCCchHHHHHH
Confidence 6899999999999999999 444 9999999987 699999999999999999 99999999
Q ss_pred --HHHHHHHHHHcCChHHHHHHHHHHHHhCCCC
Q 027404 193 --SMYGDLIWINHKDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 193 --~~lG~ll~~~~gd~eeA~~~ferAL~l~P~d 223 (224)
++.|.++.. .+++++|+..|++|++++|+|
T Consensus 104 ~~~~rG~aL~~-lgr~eEAl~~y~kAlel~p~d 135 (159)
T 2hr2_A 104 AVYSRALALDG-LGRGAEAMPEFKKVVEMIEER 135 (159)
T ss_dssp HHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHC
T ss_pred HHHhHHHHHHH-CCCHHHHHHHHHHHHhcCCCc
Confidence 999998866 579999999999999999976
No 14
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.54 E-value=6.7e-15 Score=115.48 Aligned_cols=89 Identities=16% Similarity=0.159 Sum_probs=84.3
Q ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHH
Q 027404 133 GKESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSY 212 (224)
Q Consensus 133 ~~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~ 212 (224)
++++++|+..|++|+..+|.++.+++++|.+++ ..|++++|+++|++||+++|+++.+|.++|.++.. .+++++|+.+
T Consensus 10 ~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~-~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~-~~~~~~A~~~ 87 (150)
T 4ga2_A 10 KADVERYIASVQGSTPSPRQKSIKGFYFAKLYY-EAKEYDLAKKYICTYINVQERDPKAHRFLGLLYEL-EENTDKAVEC 87 (150)
T ss_dssp HHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHH
T ss_pred cChHHHHHHHHHHhcccCcccHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCchHHHHHH
Confidence 468999999999999999999999999999988 69999999999999999999999999999998866 5799999999
Q ss_pred HHHHHHhCCCC
Q 027404 213 FDRAVHSAPDD 223 (224)
Q Consensus 213 ferAL~l~P~d 223 (224)
|++|++++|++
T Consensus 88 ~~~al~~~p~~ 98 (150)
T 4ga2_A 88 YRRSVELNPTQ 98 (150)
T ss_dssp HHHHHHHCTTC
T ss_pred HHHHHHhCCCC
Confidence 99999999986
No 15
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.54 E-value=3.7e-14 Score=110.71 Aligned_cols=89 Identities=13% Similarity=0.104 Sum_probs=83.1
Q ss_pred CCCHHHHHHHHHHHHHH------------------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 027404 133 GKESESMDVYYQEMIKA------------------YPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSM 194 (224)
Q Consensus 133 ~~d~e~A~~~yerALe~------------------dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~ 194 (224)
.+++++|+.+|++||++ +|.++.+++++|.++. ..|++++|+.+|++||.++|+++.+|+.
T Consensus 24 ~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~-~~~~~~~A~~~~~~al~~~p~~~~a~~~ 102 (162)
T 3rkv_A 24 QKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYL-NIGDLHEAEETSSEVLKREETNEKALFR 102 (162)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHH-hcCcHHHHHHHHHHHHhcCCcchHHHHH
Confidence 37899999999999999 7888899999999987 6999999999999999999999999999
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHhCCCC
Q 027404 195 YGDLIWINHKDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 195 lG~ll~~~~gd~eeA~~~ferAL~l~P~d 223 (224)
+|.++.. .|++++|+.+|++|++++|++
T Consensus 103 ~g~~~~~-~g~~~~A~~~~~~al~l~p~~ 130 (162)
T 3rkv_A 103 RAKARIA-AWKLDEAEEDLKLLLRNHPAA 130 (162)
T ss_dssp HHHHHHH-TTCHHHHHHHHHHHHHHCGGG
T ss_pred HHHHHHH-HhcHHHHHHHHHHHHhcCCCC
Confidence 9998876 579999999999999999975
No 16
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.53 E-value=7.7e-14 Score=104.26 Aligned_cols=87 Identities=17% Similarity=0.085 Sum_probs=82.7
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~f 213 (224)
+++++|+.+|+++++.+|+++.+++++|.++. ..|++++|+.+|++++.++|+++.++..+|.++.. .+++++|+.+|
T Consensus 23 ~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~~~~~~A~~~~ 100 (137)
T 3q49_B 23 RKYPEAAACYGRAITRNPLVAVYYTNRALCYL-KMQQPEQALADCRRALELDGQSVKAHFFLGQCQLE-MESYDEAIANL 100 (137)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHH-HhhHHHHHHHH
Confidence 78999999999999999999999999999987 69999999999999999999999999999998876 57999999999
Q ss_pred HHHHHhCCC
Q 027404 214 DRAVHSAPD 222 (224)
Q Consensus 214 erAL~l~P~ 222 (224)
+++++++|+
T Consensus 101 ~~a~~~~p~ 109 (137)
T 3q49_B 101 QRAYSLAKE 109 (137)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHChh
Confidence 999999886
No 17
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.53 E-value=2.6e-13 Score=97.00 Aligned_cols=89 Identities=19% Similarity=0.218 Sum_probs=83.6
Q ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHH
Q 027404 133 GKESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSY 212 (224)
Q Consensus 133 ~~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~ 212 (224)
.+++++|+.+|+++++.+|.++.++.++|.++. ..|++++|+.+|+++++.+|+++.++..+|.++.. .+++++|+.+
T Consensus 17 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~ 94 (118)
T 1elw_A 17 VGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYA-KKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEF-LNRFEEAKRT 94 (118)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHH-hhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH-HhhHHHHHHH
Confidence 378999999999999999999999999999987 69999999999999999999999999999998765 5799999999
Q ss_pred HHHHHHhCCCC
Q 027404 213 FDRAVHSAPDD 223 (224)
Q Consensus 213 ferAL~l~P~d 223 (224)
|+++++++|++
T Consensus 95 ~~~~~~~~~~~ 105 (118)
T 1elw_A 95 YEEGLKHEANN 105 (118)
T ss_dssp HHHHHTTCTTC
T ss_pred HHHHHHcCCCC
Confidence 99999999975
No 18
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.52 E-value=9.2e-14 Score=109.33 Aligned_cols=88 Identities=19% Similarity=0.078 Sum_probs=83.0
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~f 213 (224)
++++.|..++++|++.+|.++.++..+|.++. .+|++++|+++|+++++++|+++.++.++|.++.. .|++++|+.+|
T Consensus 87 ~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~ 164 (184)
T 3vtx_A 87 DEKQAAIDALQRAIALNTVYADAYYKLGLVYD-SMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEG-KGLRDEAVKYF 164 (184)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCccchHHHHHHHHHHH-HhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHH-CCCHHHHHHHH
Confidence 68999999999999999999999999999987 69999999999999999999999999999998876 57999999999
Q ss_pred HHHHHhCCCC
Q 027404 214 DRAVHSAPDD 223 (224)
Q Consensus 214 erAL~l~P~d 223 (224)
++|++++|++
T Consensus 165 ~~al~~~p~~ 174 (184)
T 3vtx_A 165 KKALEKEEKK 174 (184)
T ss_dssp HHHHHTTHHH
T ss_pred HHHHhCCccC
Confidence 9999999963
No 19
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.51 E-value=2.9e-13 Score=96.15 Aligned_cols=89 Identities=13% Similarity=0.034 Sum_probs=83.4
Q ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHHc-CChHHH
Q 027404 133 GKESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPG--DGNVLSMYGDLIWINH-KDAPRA 209 (224)
Q Consensus 133 ~~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~--da~al~~lG~ll~~~~-gd~eeA 209 (224)
.+++++|+.+|+++++.+|.++.+++++|.++. ..|++++|+++|+++++++|+ +..++..+|.++.. . +++++|
T Consensus 19 ~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~A 96 (112)
T 2kck_A 19 AGNYTESIDLFEKAIQLDPEESKYWLMKGKALY-NLERYEEAVDCYNYVINVIEDEYNKDVWAAKADALRY-IEGKEVEA 96 (112)
T ss_dssp SCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHHTT-CSSCSHHH
T ss_pred hhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHH-HhCCHHHH
Confidence 379999999999999999999999999999987 699999999999999999999 99999999988754 6 789999
Q ss_pred HHHHHHHHHhCCCC
Q 027404 210 KSYFDRAVHSAPDD 223 (224)
Q Consensus 210 ~~~ferAL~l~P~d 223 (224)
+.+|++++...|.+
T Consensus 97 ~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 97 EIAEARAKLEHHHH 110 (112)
T ss_dssp HHHHHHHGGGCCCC
T ss_pred HHHHHHHhhcccCC
Confidence 99999999999975
No 20
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.51 E-value=1.1e-13 Score=114.05 Aligned_cols=90 Identities=14% Similarity=0.001 Sum_probs=83.9
Q ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc---------
Q 027404 133 GKESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINH--------- 203 (224)
Q Consensus 133 ~~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~--------- 203 (224)
.+++++|+.+|++||+.+|+++.+++++|.++. ..|++++|+.+|++|++++|+++.++.++|.++....
T Consensus 18 ~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~ 96 (217)
T 2pl2_A 18 LGRYDAALTLFERALKENPQDPEALYWLARTQL-KLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRERG 96 (217)
T ss_dssp TTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCSSHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhhhhhhccc
Confidence 368999999999999999999999999999987 6999999999999999999999999999999886640
Q ss_pred -CChHHHHHHHHHHHHhCCCC
Q 027404 204 -KDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 204 -gd~eeA~~~ferAL~l~P~d 223 (224)
|++++|+..|++|++++|++
T Consensus 97 ~g~~~~A~~~~~~al~~~P~~ 117 (217)
T 2pl2_A 97 KGYLEQALSVLKDAERVNPRY 117 (217)
T ss_dssp HHHHHHHHHHHHHHHHHCTTC
T ss_pred ccCHHHHHHHHHHHHHhCccc
Confidence 68999999999999999986
No 21
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.50 E-value=5.6e-13 Score=96.64 Aligned_cols=88 Identities=23% Similarity=0.360 Sum_probs=83.2
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~f 213 (224)
+++++|+.+|+++++.+|+++.++.++|.++. ..|++++|+.+|++++..+|+++.++..+|.++.. .+++++|+.+|
T Consensus 26 ~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~ 103 (131)
T 2vyi_A 26 ENFEAAVHFYGKAIELNPANAVYFCNRAAAYS-KLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSS-LNKHVEAVAYY 103 (131)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH-HhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHHH-hCCHHHHHHHH
Confidence 68999999999999999999999999999987 69999999999999999999999999999998766 57999999999
Q ss_pred HHHHHhCCCC
Q 027404 214 DRAVHSAPDD 223 (224)
Q Consensus 214 erAL~l~P~d 223 (224)
+++++++|++
T Consensus 104 ~~~~~~~p~~ 113 (131)
T 2vyi_A 104 KKALELDPDN 113 (131)
T ss_dssp HHHHHHSTTC
T ss_pred HHHHhcCccc
Confidence 9999999975
No 22
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.50 E-value=1.7e-13 Score=100.50 Aligned_cols=88 Identities=20% Similarity=0.164 Sum_probs=82.9
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~f 213 (224)
+++++|+.+|+++++.+|.++.+++++|.++. ..|++++|+.+|+++++++|+++.++..+|.++.. .+++++|+.+|
T Consensus 30 ~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~ 107 (133)
T 2lni_A 30 GDYPQAMKHYTEAIKRNPKDAKLYSNRAACYT-KLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEA-MKDYTKAMDVY 107 (133)
T ss_dssp TCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHT-TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH-HhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH-HhhHHHHHHHH
Confidence 68899999999999999999999999999987 69999999999999999999999999999998766 57999999999
Q ss_pred HHHHHhCCCC
Q 027404 214 DRAVHSAPDD 223 (224)
Q Consensus 214 erAL~l~P~d 223 (224)
+++++++|++
T Consensus 108 ~~~~~~~p~~ 117 (133)
T 2lni_A 108 QKALDLDSSC 117 (133)
T ss_dssp HHHHHHCGGG
T ss_pred HHHHHhCCCc
Confidence 9999999875
No 23
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.50 E-value=1.7e-13 Score=134.83 Aligned_cols=88 Identities=23% Similarity=0.267 Sum_probs=57.8
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~f 213 (224)
|++++|+.+|++||+++|+++.+++++|.++. .+|++++|+++|++||+++|+++.+|.++|.++.. .+++++|+++|
T Consensus 23 G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~-~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~-~g~~~~A~~~~ 100 (723)
T 4gyw_A 23 GNIEEAVRLYRKALEVFPEFAAAHSNLASVLQ-QQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKE-MQDVQGALQCY 100 (723)
T ss_dssp TCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 56666666666666666666666666666665 46666666666666666666666666666666544 35666666666
Q ss_pred HHHHHhCCCC
Q 027404 214 DRAVHSAPDD 223 (224)
Q Consensus 214 erAL~l~P~d 223 (224)
++|++++|++
T Consensus 101 ~kAl~l~P~~ 110 (723)
T 4gyw_A 101 TRAIQINPAF 110 (723)
T ss_dssp HHHHHHCTTC
T ss_pred HHHHHhCCCC
Confidence 6666666654
No 24
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.49 E-value=2e-13 Score=111.79 Aligned_cols=89 Identities=12% Similarity=0.268 Sum_probs=80.9
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH-----------
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWIN----------- 202 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~----------- 202 (224)
+++++|+.+|++||+++|+++.+++++|.++. ..|++++|+++|+++++++|+++.++.++|.+++..
T Consensus 68 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~ 146 (208)
T 3urz_A 68 RNYDKAYLFYKELLQKAPNNVDCLEACAEMQV-CRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQEKKKLETD 146 (208)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 79999999999999999999999999999987 699999999999999999999999999999776422
Q ss_pred -----------------------cCChHHHHHHHHHHHHhCCCC
Q 027404 203 -----------------------HKDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 203 -----------------------~gd~eeA~~~ferAL~l~P~d 223 (224)
.+++++|+.+|++|++++|+.
T Consensus 147 ~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 190 (208)
T 3urz_A 147 YKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPST 190 (208)
T ss_dssp HC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCH
T ss_pred HHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCH
Confidence 146889999999999999963
No 25
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.49 E-value=4.1e-13 Score=100.46 Aligned_cols=88 Identities=19% Similarity=0.118 Sum_probs=83.0
Q ss_pred CCHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHH
Q 027404 134 KESESMDVYYQEMIKAYPED---ALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAK 210 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~n---a~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~ 210 (224)
+++++|+.+|+++++.+|++ +.++.++|.++. ..|++++|+.+|++++.++|+++.++..+|.++.. .+++++|+
T Consensus 42 ~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~ 119 (148)
T 2dba_A 42 GDYGGALAAYTQALGLDATPQDQAVLHRNRAACHL-KLEDYDKAETEASKAIEKDGGDVKALYRRSQALEK-LGRLDQAV 119 (148)
T ss_dssp TCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH-HTCHHHHH
T ss_pred CCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHH-HHccHHHHHHHHHHHHhhCccCHHHHHHHHHHHHH-cCCHHHHH
Confidence 79999999999999999998 899999999887 69999999999999999999999999999998876 57899999
Q ss_pred HHHHHHHHhCCCC
Q 027404 211 SYFDRAVHSAPDD 223 (224)
Q Consensus 211 ~~ferAL~l~P~d 223 (224)
.+|+++++++|++
T Consensus 120 ~~~~~al~~~p~~ 132 (148)
T 2dba_A 120 LDLQRCVSLEPKN 132 (148)
T ss_dssp HHHHHHHHHCSSC
T ss_pred HHHHHHHHcCCCc
Confidence 9999999999975
No 26
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.49 E-value=6.4e-13 Score=98.21 Aligned_cols=89 Identities=12% Similarity=0.135 Sum_probs=83.1
Q ss_pred CCCHHHHHHHHHHHHHHCCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHHcCCh
Q 027404 133 GKESESMDVYYQEMIKAYPEDA---LVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGD---GNVLSMYGDLIWINHKDA 206 (224)
Q Consensus 133 ~~d~e~A~~~yerALe~dP~na---~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~d---a~al~~lG~ll~~~~gd~ 206 (224)
.+++++|+.+|+++++.+|+++ .+++.+|.++. ..|++++|+.+|++++..+|++ +.++..+|.++.. .|++
T Consensus 15 ~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~-~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~~-~g~~ 92 (129)
T 2xev_A 15 NGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYY-ATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYG-EGKN 92 (129)
T ss_dssp TTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHH-TTCH
T ss_pred hCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHH-cCCH
Confidence 3789999999999999999998 89999999987 6999999999999999999999 8999999998876 5899
Q ss_pred HHHHHHHHHHHHhCCCC
Q 027404 207 PRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 207 eeA~~~ferAL~l~P~d 223 (224)
++|+.+|+++++..|++
T Consensus 93 ~~A~~~~~~~~~~~p~~ 109 (129)
T 2xev_A 93 TEAQQTLQQVATQYPGS 109 (129)
T ss_dssp HHHHHHHHHHHHHSTTS
T ss_pred HHHHHHHHHHHHHCCCC
Confidence 99999999999999975
No 27
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.48 E-value=7.5e-13 Score=100.86 Aligned_cols=89 Identities=17% Similarity=0.067 Sum_probs=83.5
Q ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHH
Q 027404 133 GKESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSY 212 (224)
Q Consensus 133 ~~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~ 212 (224)
.+++++|+.+|+++++.+|.++.+++++|.++. ..|++++|+.+|+++++++|+++.++..+|.++.. .+++++|+.+
T Consensus 26 ~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~ 103 (166)
T 1a17_A 26 AKDYENAIKFYSQAIELNPSNAIYYGNRSLAYL-RTECYGYALGDATRAIELDKKYIKGYYRRAASNMA-LGKFRAALRD 103 (166)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH-hccHHHHHHH
Confidence 368999999999999999999999999999987 69999999999999999999999999999988765 5799999999
Q ss_pred HHHHHHhCCCC
Q 027404 213 FDRAVHSAPDD 223 (224)
Q Consensus 213 ferAL~l~P~d 223 (224)
|+++++++|++
T Consensus 104 ~~~a~~~~p~~ 114 (166)
T 1a17_A 104 YETVVKVKPHD 114 (166)
T ss_dssp HHHHHHHSTTC
T ss_pred HHHHHHhCCCC
Confidence 99999999975
No 28
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.47 E-value=3.4e-13 Score=132.66 Aligned_cols=88 Identities=23% Similarity=0.191 Sum_probs=84.0
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~f 213 (224)
+++++|+.+|++||+++|+++.+++++|.++. .+|++++|+++|++||+++|+++.+|.++|.++.. .|++++|+++|
T Consensus 57 g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~-~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~-~g~~~eAi~~~ 134 (723)
T 4gyw_A 57 GKLQEALMHYKEAIRISPTFADAYSNMGNTLK-EMQDVQGALQCYTRAIQINPAFADAHSNLASIHKD-SGNIPEAIASY 134 (723)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 78999999999999999999999999999987 69999999999999999999999999999998866 58999999999
Q ss_pred HHHHHhCCCC
Q 027404 214 DRAVHSAPDD 223 (224)
Q Consensus 214 erAL~l~P~d 223 (224)
++|++++|++
T Consensus 135 ~~Al~l~P~~ 144 (723)
T 4gyw_A 135 RTALKLKPDF 144 (723)
T ss_dssp HHHHHHCSCC
T ss_pred HHHHHhCCCC
Confidence 9999999986
No 29
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.47 E-value=1.6e-12 Score=93.40 Aligned_cols=88 Identities=22% Similarity=0.382 Sum_probs=83.1
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~f 213 (224)
+++++|+.+|+++++.+|.++.+++++|.++. ..|++++|+.+|++++..+|.++.++..+|.++.. .+++++|+.+|
T Consensus 23 ~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~ 100 (125)
T 1na0_A 23 GDYDEAIEYYQKALELDPNNAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYK-QGDYDEAIEYY 100 (125)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-hcCHHHHHHHH
Confidence 68999999999999999999999999999987 69999999999999999999999999999998866 57899999999
Q ss_pred HHHHHhCCCC
Q 027404 214 DRAVHSAPDD 223 (224)
Q Consensus 214 erAL~l~P~d 223 (224)
+++++++|++
T Consensus 101 ~~~~~~~~~~ 110 (125)
T 1na0_A 101 QKALELDPNN 110 (125)
T ss_dssp HHHHHHCTTC
T ss_pred HHHHHhCCCc
Confidence 9999999975
No 30
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.46 E-value=5.1e-13 Score=110.08 Aligned_cols=87 Identities=17% Similarity=0.144 Sum_probs=82.6
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~f 213 (224)
+++++|+.+|++|++++|+++.+++++|.++. ..|++++|+++|++|++++ +++.++.++|.++.. .|++++|+.+|
T Consensus 98 g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~-~g~~~~A~~~~ 174 (217)
T 2pl2_A 98 GYLEQALSVLKDAERVNPRYAPLHLQRGLVYA-LLGERDKAEASLKQALALE-DTPEIRSALAELYLS-MGRLDEALAQY 174 (217)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHH-HTCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCcccHHHHHHHHHHHH-HcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 68999999999999999999999999999987 6999999999999999999 999999999998876 57999999999
Q ss_pred HHHHHhCCCC
Q 027404 214 DRAVHSAPDD 223 (224)
Q Consensus 214 erAL~l~P~d 223 (224)
+++++++|++
T Consensus 175 ~~al~~~P~~ 184 (217)
T 2pl2_A 175 AKALEQAPKD 184 (217)
T ss_dssp HHHHHHSTTC
T ss_pred HHHHHhCCCC
Confidence 9999999986
No 31
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.46 E-value=4.5e-13 Score=98.83 Aligned_cols=84 Identities=13% Similarity=0.112 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHHHHH
Q 027404 137 ESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRA 216 (224)
Q Consensus 137 e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~ferA 216 (224)
+.|+.+|+++++.+|+++.+++++|.++. ..|++++|+.+|++|++++|+++.++.++|.++.. .|++++|+.+|+++
T Consensus 2 ~~a~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~g~~~~A~~~~~~a 79 (115)
T 2kat_A 2 QAITERLEAMLAQGTDNMLLRFTLGKTYA-EHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQG-QGDRAGARQAWESG 79 (115)
T ss_dssp CCHHHHHHHHHTTTCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH-cCCHHHHHHHHHHH
Confidence 35889999999999999999999999987 69999999999999999999999999999998876 57899999999999
Q ss_pred HHhCCC
Q 027404 217 VHSAPD 222 (224)
Q Consensus 217 L~l~P~ 222 (224)
++++|+
T Consensus 80 l~~~~~ 85 (115)
T 2kat_A 80 LAAAQS 85 (115)
T ss_dssp HHHHHH
T ss_pred HHhccc
Confidence 998874
No 32
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.44 E-value=1e-13 Score=110.88 Aligned_cols=85 Identities=11% Similarity=0.059 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHHHHHH
Q 027404 138 SMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAV 217 (224)
Q Consensus 138 ~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~ferAL 217 (224)
.+...|+++++++|+++.+++++|.+++ .+|++++|+.+|++|+.++|+++.+|.++|.++.. .|++++|+.+|++|+
T Consensus 20 ~~~~~l~~al~l~p~~~~~~~~lg~~~~-~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~-~g~~~~Ai~~~~~al 97 (151)
T 3gyz_A 20 NSGATLKDINAIPDDMMDDIYSYAYDFY-NKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQI-KEQFQQAADLYAVAF 97 (151)
T ss_dssp HTSCCTGGGCCSCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HCCCCHHHHhCCCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-HccHHHHHHHHHHHH
Confidence 3444678889999999999999999988 69999999999999999999999999999998865 689999999999999
Q ss_pred HhCCCCC
Q 027404 218 HSAPDDW 224 (224)
Q Consensus 218 ~l~P~d~ 224 (224)
+++|++.
T Consensus 98 ~l~P~~~ 104 (151)
T 3gyz_A 98 ALGKNDY 104 (151)
T ss_dssp HHSSSCC
T ss_pred hhCCCCc
Confidence 9999874
No 33
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.44 E-value=1.5e-12 Score=104.73 Aligned_cols=88 Identities=17% Similarity=0.149 Sum_probs=83.0
Q ss_pred CCHHHHHHHHHHHHHHCCCCH----------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDA----------------LVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGD 197 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na----------------~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ 197 (224)
+++++|+.+|++|+++.|.++ .+++++|.++. ..|++++|+.+|++|++++|+++.++..+|.
T Consensus 52 ~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~ 130 (198)
T 2fbn_A 52 NEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYN-KNKDYPKAIDHASKVLKIDKNNVKALYKLGV 130 (198)
T ss_dssp TCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 789999999999999999998 89999999987 6999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHHHHHhCCCC
Q 027404 198 LIWINHKDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 198 ll~~~~gd~eeA~~~ferAL~l~P~d 223 (224)
++.. .+++++|+.+|++|++++|++
T Consensus 131 ~~~~-~~~~~~A~~~~~~al~~~p~~ 155 (198)
T 2fbn_A 131 ANMY-FGFLEEAKENLYKAASLNPNN 155 (198)
T ss_dssp HHHH-HTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHH-cccHHHHHHHHHHHHHHCCCc
Confidence 8876 578999999999999999975
No 34
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.43 E-value=2e-12 Score=105.23 Aligned_cols=88 Identities=15% Similarity=0.097 Sum_probs=83.4
Q ss_pred CCHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYP-EDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSY 212 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP-~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~ 212 (224)
+++++|+.+|+++++++| .+..+++++|.++. ..|++++|+.+|++|++.+|+++.++..+|.++.. .+++++|+.+
T Consensus 21 ~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~~~~~~A~~~ 98 (228)
T 4i17_A 21 KNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCAD-NIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRD-MKNNQEYIAT 98 (228)
T ss_dssp TCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHH-TTCHHHHHHH
T ss_pred cCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHH-HhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHH-cccHHHHHHH
Confidence 789999999999999999 99999999999987 69999999999999999999999999999998876 5799999999
Q ss_pred HHHHHHhCCCC
Q 027404 213 FDRAVHSAPDD 223 (224)
Q Consensus 213 ferAL~l~P~d 223 (224)
|+++++++|++
T Consensus 99 ~~~al~~~p~~ 109 (228)
T 4i17_A 99 LTEGIKAVPGN 109 (228)
T ss_dssp HHHHHHHSTTC
T ss_pred HHHHHHHCCCc
Confidence 99999999985
No 35
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.42 E-value=1.9e-12 Score=101.62 Aligned_cols=89 Identities=10% Similarity=0.155 Sum_probs=78.4
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCH--HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDF--VKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKS 211 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~--eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~ 211 (224)
+++++|+.+|++|++++|+++.++.++|.+++...|++ ++|+.+|+++++.+|++..++..+|.++.. .+++++|+.
T Consensus 58 ~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~g~~~~A~~ 136 (177)
T 2e2e_A 58 NDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLASDAFM-QANYAQAIE 136 (177)
T ss_dssp TCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-cccHHHHHH
Confidence 68899999999999999999999999998833368888 999999999999999999999999988765 578999999
Q ss_pred HHHHHHHhCCCC
Q 027404 212 YFDRAVHSAPDD 223 (224)
Q Consensus 212 ~ferAL~l~P~d 223 (224)
+|+++++++|++
T Consensus 137 ~~~~al~~~p~~ 148 (177)
T 2e2e_A 137 LWQKVMDLNSPR 148 (177)
T ss_dssp HHHHHHHTCCTT
T ss_pred HHHHHHhhCCCC
Confidence 999999999875
No 36
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.42 E-value=1.9e-12 Score=94.13 Aligned_cols=88 Identities=16% Similarity=0.280 Sum_probs=81.6
Q ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHHcCC
Q 027404 133 GKESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGD-------GNVLSMYGDLIWINHKD 205 (224)
Q Consensus 133 ~~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~d-------a~al~~lG~ll~~~~gd 205 (224)
.+++++|+.+|+++++.+|.++.+++++|.++. ..|++++|+.+|++++..+|++ +.++..+|.++.. .++
T Consensus 17 ~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~ 94 (131)
T 1elr_A 17 KKDFDTALKHYDKAKELDPTNMTYITNQAAVYF-EKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNSYFK-EEK 94 (131)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHH-TTC
T ss_pred hcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHH-HhccHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHH-hcc
Confidence 368999999999999999999999999999987 6999999999999999999887 8999999988866 579
Q ss_pred hHHHHHHHHHHHHhCCC
Q 027404 206 APRAKSYFDRAVHSAPD 222 (224)
Q Consensus 206 ~eeA~~~ferAL~l~P~ 222 (224)
+++|+.+|++++++.|+
T Consensus 95 ~~~A~~~~~~~~~~~~~ 111 (131)
T 1elr_A 95 YKDAIHFYNKSLAEHRT 111 (131)
T ss_dssp HHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHhCCC
Confidence 99999999999999884
No 37
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.42 E-value=2e-12 Score=114.35 Aligned_cols=88 Identities=17% Similarity=0.185 Sum_probs=83.5
Q ss_pred CCHHHHHHHHHHHHHHCCCC---------------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPED---------------ALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDL 198 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~n---------------a~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~l 198 (224)
+++++|+.+|++||+++|++ +.+++++|.++. .+|++++|+.+|++||+++|+++.+++++|.+
T Consensus 161 g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~-~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~ 239 (336)
T 1p5q_A 161 GKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHL-KLQAFSAAIESCNKALELDSNNEKGLSRRGEA 239 (336)
T ss_dssp TCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 79999999999999999999 699999999987 69999999999999999999999999999998
Q ss_pred HHHHcCChHHHHHHHHHHHHhCCCC
Q 027404 199 IWINHKDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 199 l~~~~gd~eeA~~~ferAL~l~P~d 223 (224)
+.. .+++++|+.+|++|++++|++
T Consensus 240 ~~~-~g~~~~A~~~~~~al~l~P~~ 263 (336)
T 1p5q_A 240 HLA-VNDFELARADFQKVLQLYPNN 263 (336)
T ss_dssp HHH-TTCHHHHHHHHHHHHHHCSSC
T ss_pred HHH-CCCHHHHHHHHHHHHHHCCCC
Confidence 876 579999999999999999976
No 38
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.40 E-value=9.3e-13 Score=120.02 Aligned_cols=88 Identities=14% Similarity=0.109 Sum_probs=63.6
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGD-FVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSY 212 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd-~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~ 212 (224)
+++++|+.+|++||+++|+++.+|+++|.++. ..|+ +++|+.+|++||+++|+++.+|+++|.++.. .+++++|+.+
T Consensus 111 g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~-~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~-~g~~~eAl~~ 188 (382)
T 2h6f_A 111 ERSERAFKLTRDAIELNAANYTVWHFRRVLLK-SLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEW-LRDPSQELEF 188 (382)
T ss_dssp CCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCCTTHHHH
T ss_pred CChHHHHHHHHHHHHhCccCHHHHHHHHHHHH-HcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-ccCHHHHHHH
Confidence 56677777777777777777777777777765 4675 7777777777777777777777777776654 3567777777
Q ss_pred HHHHHHhCCCC
Q 027404 213 FDRAVHSAPDD 223 (224)
Q Consensus 213 ferAL~l~P~d 223 (224)
|++||+++|++
T Consensus 189 ~~kal~ldP~~ 199 (382)
T 2h6f_A 189 IADILNQDAKN 199 (382)
T ss_dssp HHHHHHHCTTC
T ss_pred HHHHHHhCccC
Confidence 77777777765
No 39
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.40 E-value=3.1e-13 Score=106.02 Aligned_cols=84 Identities=8% Similarity=-0.114 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Q 027404 139 MDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVH 218 (224)
Q Consensus 139 A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~ferAL~ 218 (224)
+...|+++++++|+++.+++++|.+++ .+|++++|+.+|++++.++|+++.+|..+|.++.. .|++++|+.+|++|++
T Consensus 6 ~~~~~~~al~~~p~~~~~~~~~g~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 83 (148)
T 2vgx_A 6 GGGTIAMLNEISSDTLEQLYSLAFNQY-QSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQA-MGQYDLAIHSYSYGAV 83 (148)
T ss_dssp CCCSHHHHTTCCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred hhhhHHHHHcCCHhhHHHHHHHHHHHH-HcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHH-HhhHHHHHHHHHHHHh
Confidence 345799999999999999999999988 69999999999999999999999999999998865 6899999999999999
Q ss_pred hCCCCC
Q 027404 219 SAPDDW 224 (224)
Q Consensus 219 l~P~d~ 224 (224)
++|++.
T Consensus 84 l~p~~~ 89 (148)
T 2vgx_A 84 MDIXEP 89 (148)
T ss_dssp HSTTCT
T ss_pred cCCCCc
Confidence 999873
No 40
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.40 E-value=1.6e-12 Score=118.49 Aligned_cols=88 Identities=11% Similarity=0.072 Sum_probs=83.3
Q ss_pred C-CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHH
Q 027404 134 K-ESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSY 212 (224)
Q Consensus 134 ~-d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~ 212 (224)
+ ++++|+.+|++||+++|+++.+|+++|.++. ..|++++|+.+|++||+++|+++.+|.++|.++.. .|++++|+.+
T Consensus 145 g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~-~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~-~g~~~eAl~~ 222 (382)
T 2h6f_A 145 QKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVE-WLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQE-FKLWDNELQY 222 (382)
T ss_dssp TCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCCTTHHHH
T ss_pred ccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHH-cCChHHHHHH
Confidence 5 4999999999999999999999999999987 69999999999999999999999999999998876 4789999999
Q ss_pred HHHHHHhCCCC
Q 027404 213 FDRAVHSAPDD 223 (224)
Q Consensus 213 ferAL~l~P~d 223 (224)
|++||+++|++
T Consensus 223 ~~~al~l~P~~ 233 (382)
T 2h6f_A 223 VDQLLKEDVRN 233 (382)
T ss_dssp HHHHHHHCTTC
T ss_pred HHHHHHhCCCC
Confidence 99999999986
No 41
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.40 E-value=6.3e-12 Score=98.72 Aligned_cols=86 Identities=15% Similarity=0.142 Sum_probs=60.0
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~f 213 (224)
|++++|+.+|++||+++|+++.++.++|.++. ..|++++|+.++++++..+|+++.++..+|.++.. .+++++|+.++
T Consensus 19 g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~a~~~~ 96 (184)
T 3vtx_A 19 GDFDGAIRAYKKVLKADPNNVETLLKLGKTYM-DIGLPNDAIESLKKFVVLDTTSAEAYYILGSANFM-IDEKQAAIDAL 96 (184)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 68999999999999999999999999998876 57777777777777777766666666666554432 23344444444
Q ss_pred HHHHHhCC
Q 027404 214 DRAVHSAP 221 (224)
Q Consensus 214 erAL~l~P 221 (224)
+++++++|
T Consensus 97 ~~a~~~~~ 104 (184)
T 3vtx_A 97 QRAIALNT 104 (184)
T ss_dssp HHHHHHCT
T ss_pred HHHHHhCc
Confidence 44444444
No 42
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.39 E-value=5.2e-12 Score=103.50 Aligned_cols=88 Identities=14% Similarity=0.107 Sum_probs=82.3
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~f 213 (224)
+++++|+.+|++|++.+|+++.++.++|.++. ..|++++|+.+|++|++++|+++.++..+|.++.. .|++++|+.+|
T Consensus 57 ~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~ 134 (275)
T 1xnf_A 57 GLRALARNDFSQALAIRPDMPEVFNYLGIYLT-QAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYY-GGRDKLAQDDL 134 (275)
T ss_dssp TCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH-HccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHH-hccHHHHHHHH
Confidence 68999999999999999999999999999987 69999999999999999999999999999998876 57899999999
Q ss_pred HHHHHhCCCC
Q 027404 214 DRAVHSAPDD 223 (224)
Q Consensus 214 erAL~l~P~d 223 (224)
+++++++|++
T Consensus 135 ~~a~~~~~~~ 144 (275)
T 1xnf_A 135 LAFYQDDPND 144 (275)
T ss_dssp HHHHHHCTTC
T ss_pred HHHHHhCCCC
Confidence 9999999975
No 43
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.39 E-value=1.6e-12 Score=111.84 Aligned_cols=89 Identities=18% Similarity=0.111 Sum_probs=83.7
Q ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHH
Q 027404 133 GKESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSY 212 (224)
Q Consensus 133 ~~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~ 212 (224)
.+++++|+.+|++||+.+|+++.+++++|.++. ..|++++|+.+|++|++++|++..++.++|.++.. .|++++|+.+
T Consensus 17 ~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~ 94 (281)
T 2c2l_A 17 GRKYPEAAACYGRAITRNPLVAVYYTNRALCYL-KMQQPEQALADCRRALELDGQSVKAHFFLGQCQLE-MESYDEAIAN 94 (281)
T ss_dssp TTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHH-TTCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHHHHHHH
Confidence 378999999999999999999999999999987 69999999999999999999999999999998876 5799999999
Q ss_pred HHHHHHhCCCC
Q 027404 213 FDRAVHSAPDD 223 (224)
Q Consensus 213 ferAL~l~P~d 223 (224)
|++|++++|++
T Consensus 95 ~~~al~l~p~~ 105 (281)
T 2c2l_A 95 LQRAYSLAKEQ 105 (281)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHhCccc
Confidence 99999999864
No 44
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.38 E-value=4.3e-12 Score=110.09 Aligned_cols=88 Identities=17% Similarity=0.150 Sum_probs=81.0
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChH-HHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAP-RAKSY 212 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~e-eA~~~ 212 (224)
+++++|..+|+++++.+|+++.+++++|.++. .+|++++|+++|++|++++|+++.++.+++.+++.. |+++ +|..+
T Consensus 180 ~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~-~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~-g~~~eaa~~~ 257 (291)
T 3mkr_A 180 EKLQDAYYIFQEMADKCSPTLLLLNGQAACHM-AQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHL-GKPPEVTNRY 257 (291)
T ss_dssp THHHHHHHHHHHHHHHSCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-CCCHHHHHHH
Confidence 68999999999999999999999999999887 699999999999999999999999999999888775 5565 46799
Q ss_pred HHHHHHhCCCC
Q 027404 213 FDRAVHSAPDD 223 (224)
Q Consensus 213 ferAL~l~P~d 223 (224)
++++++++|++
T Consensus 258 ~~~~~~~~P~~ 268 (291)
T 3mkr_A 258 LSQLKDAHRSH 268 (291)
T ss_dssp HHHHHHHCTTC
T ss_pred HHHHHHhCCCC
Confidence 99999999986
No 45
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.38 E-value=4.8e-12 Score=101.15 Aligned_cols=88 Identities=11% Similarity=0.046 Sum_probs=80.6
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH----------------HHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDG----------------NVLSMYGD 197 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da----------------~al~~lG~ 197 (224)
+++++|+.+|++|++.+|+++.+++++|.++. ..|++++|+++|++++++.|.+. .++.++|.
T Consensus 51 g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (213)
T 1hh8_A 51 KNMTEAEKAFTRSINRDKHLAVAYFQRGMLYY-QTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAF 129 (213)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCccchHHHHHHHHHHH-HcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHH
Confidence 68999999999999999999999999999987 69999999999999999888776 89999998
Q ss_pred HHHHHcCChHHHHHHHHHHHHhCCCC
Q 027404 198 LIWINHKDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 198 ll~~~~gd~eeA~~~ferAL~l~P~d 223 (224)
++.. .|++++|+.+|+++++++|++
T Consensus 130 ~~~~-~g~~~~A~~~~~~al~~~p~~ 154 (213)
T 1hh8_A 130 MYAK-KEEWKKAEEQLALATSMKSEP 154 (213)
T ss_dssp HHHH-TTCHHHHHHHHHHHHTTCCSG
T ss_pred HHHH-ccCHHHHHHHHHHHHHcCccc
Confidence 8866 578999999999999999964
No 46
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.38 E-value=2.6e-12 Score=104.52 Aligned_cols=87 Identities=14% Similarity=0.064 Sum_probs=81.5
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-------HHHHHHHHHHHHHcCCh
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDG-------NVLSMYGDLIWINHKDA 206 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da-------~al~~lG~ll~~~~gd~ 206 (224)
+++++|+.+|++|++.+|+++.++.++|.++. .+|++++|+.+|+++++++|+++ .++..+|.++.. .+++
T Consensus 56 ~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~-~~~~ 133 (228)
T 4i17_A 56 KKYKEAADYFDIAIKKNYNLANAYIGKSAAYR-DMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQ-AGNI 133 (228)
T ss_dssp TCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHH-TTCH
T ss_pred hcHHHHHHHHHHHHHhCcchHHHHHHHHHHHH-HcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHH-hccH
Confidence 68999999999999999999999999999987 69999999999999999999999 668889988765 5899
Q ss_pred HHHHHHHHHHHHhCCC
Q 027404 207 PRAKSYFDRAVHSAPD 222 (224)
Q Consensus 207 eeA~~~ferAL~l~P~ 222 (224)
++|+.+|++|++++|+
T Consensus 134 ~~A~~~~~~al~~~p~ 149 (228)
T 4i17_A 134 EKAEENYKHATDVTSK 149 (228)
T ss_dssp HHHHHHHHHHTTSSCH
T ss_pred HHHHHHHHHHHhcCCC
Confidence 9999999999999996
No 47
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.37 E-value=1.9e-12 Score=101.60 Aligned_cols=92 Identities=12% Similarity=0.233 Sum_probs=80.8
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCh--HH
Q 027404 131 DSGKESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDA--PR 208 (224)
Q Consensus 131 ~~~~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~--ee 208 (224)
...+++++|+.+|+++++.+|.++.+++.+|.++. ..|++++|+.+|++|++++|+++.++..+|.+++...+++ ++
T Consensus 21 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~ 99 (177)
T 2e2e_A 21 ASQQNPEAQLQALQDKIRANPQNSEQWALLGEYYL-WQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQ 99 (177)
T ss_dssp C-----CCCCHHHHHHHHHCCSCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHH
T ss_pred hhccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHH
Confidence 34578899999999999999999999999999987 6999999999999999999999999999999844446788 99
Q ss_pred HHHHHHHHHHhCCCC
Q 027404 209 AKSYFDRAVHSAPDD 223 (224)
Q Consensus 209 A~~~ferAL~l~P~d 223 (224)
|+.+|+++++++|++
T Consensus 100 A~~~~~~al~~~p~~ 114 (177)
T 2e2e_A 100 TRAMIDKALALDSNE 114 (177)
T ss_dssp HHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHhCCCc
Confidence 999999999999975
No 48
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.37 E-value=1.2e-11 Score=89.36 Aligned_cols=87 Identities=22% Similarity=0.349 Sum_probs=59.7
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~f 213 (224)
+++++|..+|+++++.+|.++.+++++|.++. ..|++++|+++|++++..+|++..++..++.++.. .+++++|+.+|
T Consensus 49 ~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~ 126 (136)
T 2fo7_A 49 GDYDEAIEYYQKALELDPRSAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK-QGDYDEAIEYY 126 (136)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-TTCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHCCCchHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-HccHHHHHHHH
Confidence 46667777777777777777777777776665 46777777777777777777777766666666543 45677777777
Q ss_pred HHHHHhCCC
Q 027404 214 DRAVHSAPD 222 (224)
Q Consensus 214 erAL~l~P~ 222 (224)
++++.++|+
T Consensus 127 ~~~~~~~~~ 135 (136)
T 2fo7_A 127 QKALELDPR 135 (136)
T ss_dssp HHHHHHSTT
T ss_pred HHHHccCCC
Confidence 777777665
No 49
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.37 E-value=6.4e-12 Score=116.91 Aligned_cols=90 Identities=17% Similarity=0.067 Sum_probs=84.8
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHH
Q 027404 132 SGKESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKS 211 (224)
Q Consensus 132 ~~~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~ 211 (224)
..+++++|+.+|++||+++|+++.+++++|.++. .+|++++|+++|++|++++|+++.++.++|.++.. .+++++|+.
T Consensus 18 ~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~-~g~~~eA~~ 95 (477)
T 1wao_1 18 KAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYL-RTECYGYALGDATRAIELDKKYIKGYYRRAASNMA-LGKFRAALR 95 (477)
T ss_dssp TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHH-HTCHHHHHH
T ss_pred HhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHHHHHH
Confidence 3479999999999999999999999999999987 69999999999999999999999999999998876 578999999
Q ss_pred HHHHHHHhCCCC
Q 027404 212 YFDRAVHSAPDD 223 (224)
Q Consensus 212 ~ferAL~l~P~d 223 (224)
+|++|++++|++
T Consensus 96 ~~~~al~~~p~~ 107 (477)
T 1wao_1 96 DYETVVKVKPHD 107 (477)
T ss_dssp HHHHHHHHSTTC
T ss_pred HHHHHHHhCCCC
Confidence 999999999976
No 50
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.35 E-value=5.3e-12 Score=116.38 Aligned_cols=88 Identities=16% Similarity=0.236 Sum_probs=81.1
Q ss_pred CCHHHHHHHHHHHHHHCCCC---------------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPED---------------ALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDL 198 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~n---------------a~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~l 198 (224)
+++++|+.+|++||+++|.+ ..+++++|.++. .+|++++|+.+|++||+++|+++.+|+++|.+
T Consensus 282 g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~-~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a 360 (457)
T 1kt0_A 282 GKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYL-KLREYTKAVECCDKALGLDSANEKGLYRRGEA 360 (457)
T ss_dssp TCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhcCCccHHHHHHHHHH
Confidence 79999999999999999999 799999999987 69999999999999999999999999999998
Q ss_pred HHHHcCChHHHHHHHHHHHHhCCCC
Q 027404 199 IWINHKDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 199 l~~~~gd~eeA~~~ferAL~l~P~d 223 (224)
++. .+++++|+.+|++|++++|++
T Consensus 361 ~~~-~g~~~~A~~~~~~al~l~P~~ 384 (457)
T 1kt0_A 361 QLL-MNEFESAKGDFEKVLEVNPQN 384 (457)
T ss_dssp HHH-TTCHHHHHHHHHHHHTTC---
T ss_pred HHH-ccCHHHHHHHHHHHHHhCCCC
Confidence 876 579999999999999999976
No 51
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.35 E-value=1.3e-12 Score=100.35 Aligned_cols=83 Identities=7% Similarity=-0.128 Sum_probs=73.6
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHHHHHHHh
Q 027404 140 DVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHS 219 (224)
Q Consensus 140 ~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~ferAL~l 219 (224)
...|+++++++|+++.+++++|.++. ..|++++|+.+|++++..+|+++.+|..+|.++.. .+++++|+.+|++|+++
T Consensus 4 ~~~l~~al~~~p~~~~~~~~~a~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~ 81 (142)
T 2xcb_A 4 GGTLAMLRGLSEDTLEQLYALGFNQY-QAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQS-LGLYEQALQSYSYGALM 81 (142)
T ss_dssp -----CCTTCCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred chhHHHHHcCCHHHHHHHHHHHHHHH-HHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-HhhHHHHHHHHHHHHhc
Confidence 35889999999999999999999987 69999999999999999999999999999998865 68999999999999999
Q ss_pred CCCCC
Q 027404 220 APDDW 224 (224)
Q Consensus 220 ~P~d~ 224 (224)
+|++.
T Consensus 82 ~p~~~ 86 (142)
T 2xcb_A 82 DINEP 86 (142)
T ss_dssp CTTCT
T ss_pred CCCCc
Confidence 99873
No 52
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.35 E-value=2.3e-11 Score=87.78 Aligned_cols=88 Identities=22% Similarity=0.346 Sum_probs=82.0
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~f 213 (224)
+++++|+.+|+++++.+|.++.++..+|.++. ..|++++|+.+|++++..+|.+..++..++.++.. .+++++|+.+|
T Consensus 15 ~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~ 92 (136)
T 2fo7_A 15 GDYDEAIEYYQKALELDPRSAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK-QGDYDEAIEYY 92 (136)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-TTCHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCcchhHHHHHHHHHH-HhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHH-hcCHHHHHHHH
Confidence 68999999999999999999999999999887 68999999999999999999999999999988765 67899999999
Q ss_pred HHHHHhCCCC
Q 027404 214 DRAVHSAPDD 223 (224)
Q Consensus 214 erAL~l~P~d 223 (224)
+++++..|++
T Consensus 93 ~~~~~~~~~~ 102 (136)
T 2fo7_A 93 QKALELDPRS 102 (136)
T ss_dssp HHHHHHCTTC
T ss_pred HHHHHhCCCC
Confidence 9999999864
No 53
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.34 E-value=2.6e-12 Score=98.36 Aligned_cols=77 Identities=17% Similarity=0.082 Sum_probs=70.1
Q ss_pred HHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC
Q 027404 145 EMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 145 rALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~ferAL~l~P~d 223 (224)
++..+||+.++++.+.|..++ .+|++++|+++|++||+++|+++.+|.++|.++.. .+++++|+.+|++|++++|++
T Consensus 4 r~a~inP~~a~~~~~~G~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~-~~~~~~A~~~~~~al~~~p~~ 80 (126)
T 4gco_A 4 RLAYINPELAQEEKNKGNEYF-KKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTK-LMEFQRALDDCDTCIRLDSKF 80 (126)
T ss_dssp ---CCCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHh-hccHHHHHHHHHHHHHhhhhh
Confidence 556689999999999999998 69999999999999999999999999999998876 578999999999999999986
No 54
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.34 E-value=1.7e-11 Score=93.61 Aligned_cols=88 Identities=16% Similarity=0.052 Sum_probs=55.1
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~f 213 (224)
+++++|..+|+++++.+|.++.++..+|.++. ..|++++|+.+|++++..+|+++.++..+|.++.. .+++++|+.+|
T Consensus 90 ~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~ 167 (186)
T 3as5_A 90 QKYDLAVPLLIKVAEANPINFNVRFRLGVALD-NLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQ-MGRHEEALPHF 167 (186)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHH-HcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 45666666666666666666666666666555 46666666666666666666666666666665544 35666666666
Q ss_pred HHHHHhCCCC
Q 027404 214 DRAVHSAPDD 223 (224)
Q Consensus 214 erAL~l~P~d 223 (224)
+++++++|++
T Consensus 168 ~~~~~~~~~~ 177 (186)
T 3as5_A 168 KKANELDEGA 177 (186)
T ss_dssp HHHHHHHHCC
T ss_pred HHHHHcCCCc
Confidence 6666665543
No 55
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.33 E-value=1.3e-11 Score=99.55 Aligned_cols=85 Identities=26% Similarity=0.167 Sum_probs=80.1
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~f 213 (224)
+++++|+.+|+++++.+|.++.++.++|.++. ..|++++|+.+|+++++.+|+++.++..+|.++.. .|++++|+.+|
T Consensus 153 ~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~ 230 (258)
T 3uq3_A 153 SDWPNAVKAYTEMIKRAPEDARGYSNRAAALA-KLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIA-VKEYASALETL 230 (258)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhcCcccHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH-HhhHHHHHHHH
Confidence 68999999999999999999999999999987 69999999999999999999999999999998876 57899999999
Q ss_pred HHHHHhC
Q 027404 214 DRAVHSA 220 (224)
Q Consensus 214 erAL~l~ 220 (224)
+++++++
T Consensus 231 ~~a~~~~ 237 (258)
T 3uq3_A 231 DAARTKD 237 (258)
T ss_dssp HHHHHHH
T ss_pred HHHHHhC
Confidence 9999998
No 56
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.32 E-value=3.6e-11 Score=91.75 Aligned_cols=88 Identities=14% Similarity=0.010 Sum_probs=81.4
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~f 213 (224)
+++++|+.+|+++++.+|.++.++.++|.++. ..|++++|+++|++++..+|+++.++..+|.++.. .+++++|+.+|
T Consensus 56 ~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~ 133 (186)
T 3as5_A 56 GAVDRGTELLERSLADAPDNVKVATVLGLTYV-QVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDN-LGRFDEAIDSF 133 (186)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHH-cCcHHHHHHHH
Confidence 68999999999999999999999999999887 68999999999999999999999999999988765 57899999999
Q ss_pred HHHHHhCCCC
Q 027404 214 DRAVHSAPDD 223 (224)
Q Consensus 214 erAL~l~P~d 223 (224)
+++++.+|++
T Consensus 134 ~~~~~~~~~~ 143 (186)
T 3as5_A 134 KIALGLRPNE 143 (186)
T ss_dssp HHHHHHCTTC
T ss_pred HHHHhcCccc
Confidence 9999999875
No 57
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.32 E-value=1.2e-11 Score=106.67 Aligned_cols=88 Identities=17% Similarity=0.243 Sum_probs=60.0
Q ss_pred CCHHHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPE--DALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKS 211 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~--na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~ 211 (224)
+++++|+.+|+++++.+|. ++.+++++|.++. .+|++++|+.+|+++++++|+++.+|..+|.++.. .|++++|+.
T Consensus 191 g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A~~ 268 (365)
T 4eqf_A 191 SVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFH-LSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLAN-GDRSEEAVE 268 (365)
T ss_dssp HHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHH
T ss_pred hhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHHHHHH
Confidence 5667777777777777777 6677777776665 46777777777777777777777777777666554 456777777
Q ss_pred HHHHHHHhCCCC
Q 027404 212 YFDRAVHSAPDD 223 (224)
Q Consensus 212 ~ferAL~l~P~d 223 (224)
+|+++++++|++
T Consensus 269 ~~~~al~~~p~~ 280 (365)
T 4eqf_A 269 AYTRALEIQPGF 280 (365)
T ss_dssp HHHHHHHHCTTC
T ss_pred HHHHHHhcCCCc
Confidence 777777766653
No 58
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.31 E-value=7e-12 Score=113.19 Aligned_cols=88 Identities=18% Similarity=0.154 Sum_probs=83.1
Q ss_pred CCHHHHHHHHHHHHH----------------HCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 027404 134 KESESMDVYYQEMIK----------------AYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGD 197 (224)
Q Consensus 134 ~d~e~A~~~yerALe----------------~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ 197 (224)
+++++|+.+|++||+ .+|.++.++.++|.++. .+|++++|+++|++||+++|+++.+++.+|.
T Consensus 237 g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~-~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~ 315 (370)
T 1ihg_A 237 QNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKL-KMSDWQGAVDSCLEALEIDPSNTKALYRRAQ 315 (370)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHH-hccCHHHHHHHHHHHHHhCchhHHHHHHHHH
Confidence 789999999999999 88889999999999987 6999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHHHHHhCCCC
Q 027404 198 LIWINHKDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 198 ll~~~~gd~eeA~~~ferAL~l~P~d 223 (224)
++.. .+++++|+.+|++|++++|++
T Consensus 316 ~~~~-~g~~~eA~~~l~~Al~l~P~~ 340 (370)
T 1ihg_A 316 GWQG-LKEYDQALADLKKAQEIAPED 340 (370)
T ss_dssp HHHH-TTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHH-ccCHHHHHHHHHHHHHhCCCC
Confidence 8876 578999999999999999975
No 59
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.31 E-value=1.3e-11 Score=106.40 Aligned_cols=87 Identities=11% Similarity=-0.003 Sum_probs=82.6
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~f 213 (224)
+++++|+.+|+++++.+|+++.+++++|.++. ..|++++|+.+|++|++++|+++.++..+|.++.. .|++++|+.+|
T Consensus 79 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A~~~~ 156 (365)
T 4eqf_A 79 GDLPVTILFMEAAILQDPGDAEAWQFLGITQA-ENENEQAAIVALQRCLELQPNNLKALMALAVSYTN-TSHQQDACEAL 156 (365)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH-HCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHc-cccHHHHHHHH
Confidence 68999999999999999999999999999987 69999999999999999999999999999998866 58999999999
Q ss_pred HHHHHhCCC
Q 027404 214 DRAVHSAPD 222 (224)
Q Consensus 214 erAL~l~P~ 222 (224)
+++++++|+
T Consensus 157 ~~al~~~p~ 165 (365)
T 4eqf_A 157 KNWIKQNPK 165 (365)
T ss_dssp HHHHHHCHH
T ss_pred HHHHHhCcc
Confidence 999999885
No 60
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.29 E-value=3.4e-11 Score=96.85 Aligned_cols=87 Identities=15% Similarity=0.080 Sum_probs=45.4
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~f 213 (224)
+++++|+.+|+++++.+|.++.++..+|.++. ..|++++|+.+|+++++.+|+++.++..+|.++.. .+++++|+.+|
T Consensus 105 ~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~ 182 (243)
T 2q7f_A 105 EMYKEAKDMFEKALRAGMENGDLFYMLGTVLV-KLEQPKLALPYLQRAVELNENDTEARFQFGMCLAN-EGMLDEALSQF 182 (243)
T ss_dssp TCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHH-HTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCCHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 34555555555555555555555555555544 35555555555555555555555555555544433 24455555555
Q ss_pred HHHHHhCCC
Q 027404 214 DRAVHSAPD 222 (224)
Q Consensus 214 erAL~l~P~ 222 (224)
+++++.+|+
T Consensus 183 ~~~~~~~~~ 191 (243)
T 2q7f_A 183 AAVTEQDPG 191 (243)
T ss_dssp HHHHHHCTT
T ss_pred HHHHHhCcc
Confidence 555555443
No 61
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.29 E-value=4.9e-12 Score=90.38 Aligned_cols=80 Identities=14% Similarity=0.139 Sum_probs=72.7
Q ss_pred CCHHHHHHHHHHHHHHCCCCHH-HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDAL-VLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSY 212 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~-~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~ 212 (224)
+++++|+.+|+++++.+|+++. +++++|.++. ..|++++|+++|++|++++|++..++.+ +.+.+|+.+
T Consensus 14 ~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~---------~~~~~a~~~ 83 (99)
T 2kc7_A 14 GDIENALQALEEFLQTEPVGKDEAYYLMGNAYR-KLGDWQKALNNYQSAIELNPDSPALQAR---------KMVMDILNF 83 (99)
T ss_dssp TCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTSTHHHHH---------HHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhcCCCcHHHHHH---------HHHHHHHHH
Confidence 6899999999999999999999 9999999987 6999999999999999999999988743 247889999
Q ss_pred HHHHHHhCCCC
Q 027404 213 FDRAVHSAPDD 223 (224)
Q Consensus 213 ferAL~l~P~d 223 (224)
|++++.++|++
T Consensus 84 ~~~~~~~~p~~ 94 (99)
T 2kc7_A 84 YNKDMYNQLEH 94 (99)
T ss_dssp HCCTTHHHHCC
T ss_pred HHHHhccCccc
Confidence 99999988875
No 62
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.28 E-value=1.2e-11 Score=90.36 Aligned_cols=72 Identities=14% Similarity=0.087 Sum_probs=64.3
Q ss_pred HCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC
Q 027404 149 AYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPD 222 (224)
Q Consensus 149 ~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~ferAL~l~P~ 222 (224)
.+|+++.+++++|.++. ..|++++|+.+|++|++++|+++.+|.++|.++.. .|++++|+.+|++|+++.|.
T Consensus 2 ~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~-~g~~~~A~~~~~~al~l~~~ 73 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHL-KHDNASRALALFEELVETDPDYVGTYYHLGKLYER-LDRTDDAIDTYAQGIEVARE 73 (100)
T ss_dssp ---CCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhhhc
Confidence 58999999999999987 69999999999999999999999999999998866 58999999999999998763
No 63
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.28 E-value=2.3e-11 Score=104.67 Aligned_cols=88 Identities=8% Similarity=-0.032 Sum_probs=78.5
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHH----------------------------------HHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAE----------------------------------EYCG 179 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe----------------------------------~~~e 179 (224)
+++++|+.+|++|++.+|+++.+++++|.++. .+|++++|+ +.|+
T Consensus 131 g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~-~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~a~~~l~ 209 (287)
T 3qou_A 131 SNYTDALPLLXDAWQLSNQNGEIGLLLAETLI-ALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTPEIQQLQ 209 (287)
T ss_dssp TCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHH-HTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCcchhHHHHHHHHHH-HCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCccHHHHH
Confidence 79999999999999999999999999999887 689888765 4456
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC
Q 027404 180 RAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 180 rAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~ferAL~l~P~d 223 (224)
++++++|+++.++.++|.++.. .|++++|+..|+++++++|++
T Consensus 210 ~al~~~P~~~~~~~~la~~l~~-~g~~~~A~~~l~~~l~~~p~~ 252 (287)
T 3qou_A 210 QQVAENPEDAALATQLALQLHQ-VGRNEEALELLFGHLRXDLTA 252 (287)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTG
T ss_pred HHHhcCCccHHHHHHHHHHHHH-cccHHHHHHHHHHHHhccccc
Confidence 6688899999999999998765 689999999999999999975
No 64
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.28 E-value=1.1e-11 Score=114.45 Aligned_cols=88 Identities=9% Similarity=-0.135 Sum_probs=83.3
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHc--------CCHHHHHHHHHHHHHhCC---CCHHHHHHHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIR--------GDFVKAEEYCGRAILAKP---GDGNVLSMYGDLIWIN 202 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~--------Gd~eeAe~~~erAL~ldP---~da~al~~lG~ll~~~ 202 (224)
+++++|+.+|++|++++|+++.+|+++|.++. .. |++++|+.+|++|++++| +++.+|.++|.+++.
T Consensus 193 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~- 270 (474)
T 4abn_A 193 RHVMDSVRQAKLAVQMDVLDGRSWYILGNAYL-SLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKY- 270 (474)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHH-
T ss_pred hhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HHHHhhccccchHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHH-
Confidence 68999999999999999999999999999987 57 999999999999999999 999999999998876
Q ss_pred cCChHHHHHHHHHHHHhCCCC
Q 027404 203 HKDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 203 ~gd~eeA~~~ferAL~l~P~d 223 (224)
.|++++|+.+|++|++++|++
T Consensus 271 ~g~~~~A~~~~~~al~l~p~~ 291 (474)
T 4abn_A 271 EESYGEALEGFSQAAALDPAW 291 (474)
T ss_dssp TTCHHHHHHHHHHHHHHCTTC
T ss_pred cCCHHHHHHHHHHHHHhCCCC
Confidence 589999999999999999986
No 65
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.28 E-value=2.9e-11 Score=112.58 Aligned_cols=88 Identities=15% Similarity=0.129 Sum_probs=66.8
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~f 213 (224)
+++++|+.+|++|++++|+++.+++++|.++. .+|++++|+++|++|++++|+++.++.++|.++.. .|++++|+++|
T Consensus 37 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~g~~~~A~~~~ 114 (568)
T 2vsy_A 37 GDTTAGEMAVQRGLALHPGHPEAVARLGRVRW-TQQRHAEAAVLLQQASDAAPEHPGIALWLGHALED-AGQAEAAAAAY 114 (568)
T ss_dssp TCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 57777777777777777777777777777766 57777777777777777777777777777776654 46777777777
Q ss_pred HHHHHhCCCC
Q 027404 214 DRAVHSAPDD 223 (224)
Q Consensus 214 erAL~l~P~d 223 (224)
+++++++|++
T Consensus 115 ~~al~~~p~~ 124 (568)
T 2vsy_A 115 TRAHQLLPEE 124 (568)
T ss_dssp HHHHHHCTTC
T ss_pred HHHHHhCCCC
Confidence 7777777764
No 66
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.27 E-value=3.3e-11 Score=103.03 Aligned_cols=87 Identities=16% Similarity=0.056 Sum_probs=46.0
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~f 213 (224)
+++++|+.+|+++++.+|+++.+++++|.++. ..|++++|+.+|+++++++|+++.++..+|.++.. .|++++|+.+|
T Consensus 231 g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~ 308 (368)
T 1fch_A 231 GEYDKAVDCFTAALSVRPNDYLLWNKLGATLA-NGNQSEEAVAAYRRALELQPGYIRSRYNLGISCIN-LGAHREAVEHF 308 (368)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-CCCHHHHHHHH
Confidence 45555555555555555555555555555544 35555555555555555555555555555554443 24555555555
Q ss_pred HHHHHhCCC
Q 027404 214 DRAVHSAPD 222 (224)
Q Consensus 214 erAL~l~P~ 222 (224)
+++++++|+
T Consensus 309 ~~al~~~~~ 317 (368)
T 1fch_A 309 LEALNMQRK 317 (368)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHhCCC
Confidence 555555443
No 67
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.27 E-value=9.3e-11 Score=94.24 Aligned_cols=88 Identities=18% Similarity=0.286 Sum_probs=79.9
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~f 213 (224)
+++++|+.+|+++++.+|.++.++..+|.++. ..|++++|+++|+++++.+|+++.++..+|.++.. .+++++|+.+|
T Consensus 71 ~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~ 148 (243)
T 2q7f_A 71 NELERALAFYDKALELDSSAATAYYGAGNVYV-VKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVK-LEQPKLALPYL 148 (243)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHH-TSCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCcchHHHHHHHHHHH-HhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-hccHHHHHHHH
Confidence 68899999999999999999999999999887 69999999999999999999999999999988765 57899999999
Q ss_pred HHHHHhCCCC
Q 027404 214 DRAVHSAPDD 223 (224)
Q Consensus 214 erAL~l~P~d 223 (224)
+++++++|++
T Consensus 149 ~~~~~~~~~~ 158 (243)
T 2q7f_A 149 QRAVELNEND 158 (243)
T ss_dssp HHHHHHCTTC
T ss_pred HHHHHhCCcc
Confidence 9999998865
No 68
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.27 E-value=6.7e-12 Score=111.24 Aligned_cols=89 Identities=20% Similarity=0.144 Sum_probs=78.5
Q ss_pred CCCHHHHHHHHHHHHHHCCCCH-----------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 027404 133 GKESESMDVYYQEMIKAYPEDA-----------------LVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMY 195 (224)
Q Consensus 133 ~~d~e~A~~~yerALe~dP~na-----------------~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~l 195 (224)
.+++++|+.+|++||+.+|++. .+++++|.++. .+|++++|+.+|++||+++|+++.+|+++
T Consensus 192 ~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~-~~g~~~~A~~~~~~al~~~p~~~~a~~~l 270 (338)
T 2if4_A 192 EEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLI-KLKRYDEAIGHCNIVLTEEEKNPKALFRR 270 (338)
T ss_dssp SSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHH-TTTCCHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 3789999999999999999988 38999999887 69999999999999999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHHHHHHhCCCC
Q 027404 196 GDLIWINHKDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 196 G~ll~~~~gd~eeA~~~ferAL~l~P~d 223 (224)
|.++.. .+++++|+.+|++|++++|++
T Consensus 271 g~a~~~-~g~~~~A~~~l~~al~l~p~~ 297 (338)
T 2if4_A 271 GKAKAE-LGQMDSARDDFRKAQKYAPDD 297 (338)
T ss_dssp HHHHHT-TTCHHHHHHHHHHTTC-----
T ss_pred HHHHHH-cCCHHHHHHHHHHHHHHCCCC
Confidence 998865 579999999999999999975
No 69
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.26 E-value=7.4e-11 Score=100.83 Aligned_cols=88 Identities=9% Similarity=0.012 Sum_probs=83.4
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~f 213 (224)
+++++|+.+|+++++.+|.++.+++++|.++. ..|++++|+.+|+++++++|+++.++..+|.++.. .|++++|+.+|
T Consensus 78 g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~ 155 (368)
T 1fch_A 78 GDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQA-ENEQELLAISALRRCLELKPDNQTALMALAVSFTN-ESLQRQACEIL 155 (368)
T ss_dssp TCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 68999999999999999999999999999987 69999999999999999999999999999998765 68999999999
Q ss_pred HHHHHhCCCC
Q 027404 214 DRAVHSAPDD 223 (224)
Q Consensus 214 erAL~l~P~d 223 (224)
+++++++|++
T Consensus 156 ~~~~~~~~~~ 165 (368)
T 1fch_A 156 RDWLRYTPAY 165 (368)
T ss_dssp HHHHHTSTTT
T ss_pred HHHHHhCcCc
Confidence 9999999975
No 70
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.25 E-value=5.5e-11 Score=94.94 Aligned_cols=86 Identities=14% Similarity=0.060 Sum_probs=78.8
Q ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHH
Q 027404 133 GKESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSY 212 (224)
Q Consensus 133 ~~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~ 212 (224)
.+++++|+.+|++++ +| ++.+++++|.++. ..|++++|+.+|++|+.++|+++.++.++|.++.. .+++++|+.+
T Consensus 19 ~~~~~~A~~~~~~a~--~~-~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~-~~~~~~A~~~ 93 (213)
T 1hh8_A 19 KKDWKGALDAFSAVQ--DP-HSRICFNIGCMYT-ILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQ-TEKYDLAIKD 93 (213)
T ss_dssp TTCHHHHHHHHHTSS--SC-CHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHH
T ss_pred hCCHHHHHHHHHHHc--CC-ChHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHH-cccHHHHHHH
Confidence 378999999999996 45 7899999999987 69999999999999999999999999999998876 5799999999
Q ss_pred HHHHHHhCCCC
Q 027404 213 FDRAVHSAPDD 223 (224)
Q Consensus 213 ferAL~l~P~d 223 (224)
|++++++.|++
T Consensus 94 ~~~al~~~~~~ 104 (213)
T 1hh8_A 94 LKEALIQLRGN 104 (213)
T ss_dssp HHHHHHTTTTC
T ss_pred HHHHHHhCCCc
Confidence 99999998874
No 71
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.24 E-value=3.5e-11 Score=98.88 Aligned_cols=88 Identities=17% Similarity=0.239 Sum_probs=79.9
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~f 213 (224)
+++++|+.+|+++++.+|.++.++.++|.++. ..|++++|+.+|+++++++|+++.++..+|..++. .+++++|+.+|
T Consensus 88 ~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~ 165 (272)
T 3u4t_A 88 GQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFY-NKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYY-NKEYVKADSSF 165 (272)
T ss_dssp TCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHH-HTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhcCcccHHHHHHHHHHHH-HccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 68999999999999999999999999999987 69999999999999999999999999999933333 35899999999
Q ss_pred HHHHHhCCCC
Q 027404 214 DRAVHSAPDD 223 (224)
Q Consensus 214 erAL~l~P~d 223 (224)
+++++++|++
T Consensus 166 ~~a~~~~p~~ 175 (272)
T 3u4t_A 166 VKVLELKPNI 175 (272)
T ss_dssp HHHHHHSTTC
T ss_pred HHHHHhCccc
Confidence 9999999975
No 72
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.24 E-value=8.1e-11 Score=102.53 Aligned_cols=87 Identities=21% Similarity=0.156 Sum_probs=49.7
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~f 213 (224)
+++++|..+++++++.+|.++.+++++|.++. ..|++++|+++|+++++++|++..++..+|.++.. .|++++|+.+|
T Consensus 47 ~~~~~a~~~~~~a~~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A~~~~ 124 (388)
T 1w3b_A 47 RRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYK-ERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVA-AGDMEGAVQAY 124 (388)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HSCSSHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCchHHHHHHHHHHH-HCCCHHHHHHHHHHHHHcCcchHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 35555555566666666666666666665554 45666666666666666666665555555555443 34555555555
Q ss_pred HHHHHhCCC
Q 027404 214 DRAVHSAPD 222 (224)
Q Consensus 214 erAL~l~P~ 222 (224)
+++++++|+
T Consensus 125 ~~al~~~p~ 133 (388)
T 1w3b_A 125 VSALQYNPD 133 (388)
T ss_dssp HHHHHHCTT
T ss_pred HHHHHhCCC
Confidence 555555554
No 73
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.23 E-value=1e-10 Score=98.37 Aligned_cols=87 Identities=14% Similarity=0.119 Sum_probs=82.4
Q ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHH
Q 027404 133 GKESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSY 212 (224)
Q Consensus 133 ~~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~ 212 (224)
.+++++|+.+|+++++.+|+++.+++++|.++. ..|++++|+.+|+++++++|++..++..+|.++.. .+++++|+.+
T Consensus 16 ~g~~~~A~~~~~~~l~~~p~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~ 93 (359)
T 3ieg_A 16 AGQLADALSQFHAAVDGDPDNYIAYYRRATVFL-AMGKSKAALPDLTKVIALKMDFTAARLQRGHLLLK-QGKLDEAEDD 93 (359)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCCCcchHHHHHHHHHHH-cCChHHHHHH
Confidence 378999999999999999999999999999987 69999999999999999999999999999998876 5789999999
Q ss_pred HHHHHHhCC
Q 027404 213 FDRAVHSAP 221 (224)
Q Consensus 213 ferAL~l~P 221 (224)
|+++++++|
T Consensus 94 ~~~~~~~~~ 102 (359)
T 3ieg_A 94 FKKVLKSNP 102 (359)
T ss_dssp HHHHHTSCC
T ss_pred HHHHHhcCC
Confidence 999999998
No 74
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.23 E-value=2.5e-11 Score=112.02 Aligned_cols=87 Identities=14% Similarity=0.066 Sum_probs=81.3
Q ss_pred CCH-HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc---------
Q 027404 134 KES-ESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINH--------- 203 (224)
Q Consensus 134 ~d~-e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~--------- 203 (224)
+++ ++|+.+|++|++++|+++.+|+++|.++. .+|++++|+++|++|++++|+ +.++.++|.++.. .
T Consensus 116 g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~-~~~~~~lg~~~~~-~~~~~~~~~~ 192 (474)
T 4abn_A 116 PDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYW-KKGDVTSAHTCFSGALTHCKN-KVSLQNLSMVLRQ-LQTDSGDEHS 192 (474)
T ss_dssp SSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHTTCCC-HHHHHHHHHHHTT-CCCSCHHHHH
T ss_pred cccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhhCCC-HHHHHHHHHHHHH-hccCChhhhh
Confidence 688 99999999999999999999999999988 699999999999999999999 7999999988765 5
Q ss_pred CChHHHHHHHHHHHHhCCCC
Q 027404 204 KDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 204 gd~eeA~~~ferAL~l~P~d 223 (224)
+++++|+.+|++|++++|++
T Consensus 193 g~~~~A~~~~~~al~~~p~~ 212 (474)
T 4abn_A 193 RHVMDSVRQAKLAVQMDVLD 212 (474)
T ss_dssp HHHHHHHHHHHHHHHHCTTC
T ss_pred hhHHHHHHHHHHHHHhCCCC
Confidence 68999999999999999986
No 75
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.23 E-value=7.2e-11 Score=95.22 Aligned_cols=88 Identities=19% Similarity=0.157 Sum_probs=78.9
Q ss_pred CCHHHHHHHHHHHHH--------------------------HCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 027404 134 KESESMDVYYQEMIK--------------------------AYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPG 187 (224)
Q Consensus 134 ~d~e~A~~~yerALe--------------------------~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~ 187 (224)
+++++|+.+|+++++ .+|.++.++.++|.++. ..|++++|+.+|++++..+|+
T Consensus 93 ~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~a~~~~~~ 171 (258)
T 3uq3_A 93 GDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYF-TKSDWPNAVKAYTEMIKRAPE 171 (258)
T ss_dssp TCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTT
T ss_pred ccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhcCcc
Confidence 567777777777777 77888899999999987 699999999999999999999
Q ss_pred CHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC
Q 027404 188 DGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 188 da~al~~lG~ll~~~~gd~eeA~~~ferAL~l~P~d 223 (224)
++.++..+|.++.. .+++++|+.+|+++++++|++
T Consensus 172 ~~~~~~~l~~~~~~-~~~~~~A~~~~~~al~~~~~~ 206 (258)
T 3uq3_A 172 DARGYSNRAAALAK-LMSFPEAIADCNKAIEKDPNF 206 (258)
T ss_dssp CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTC
T ss_pred cHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHhCHHH
Confidence 99999999998866 579999999999999999975
No 76
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.22 E-value=1.4e-10 Score=96.75 Aligned_cols=87 Identities=17% Similarity=0.285 Sum_probs=44.4
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~f 213 (224)
+++++|+.+|+++++.+|.++.++..+|.++. ..|++++|+.+|+++++.+|+++.++..+|.++.. .+++++|+.+|
T Consensus 152 ~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~ 229 (327)
T 3cv0_A 152 NEYRECRTLLHAALEMNPNDAQLHASLGVLYN-LSNNYDSAAANLRRAVELRPDDAQLWNKLGATLAN-GNRPQEALDAY 229 (327)
T ss_dssp HHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH-HhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 34555555555555555555555555555444 35555555555555555555555555555544433 34455555555
Q ss_pred HHHHHhCCC
Q 027404 214 DRAVHSAPD 222 (224)
Q Consensus 214 erAL~l~P~ 222 (224)
+++++++|+
T Consensus 230 ~~a~~~~~~ 238 (327)
T 3cv0_A 230 NRALDINPG 238 (327)
T ss_dssp HHHHHHCTT
T ss_pred HHHHHcCCC
Confidence 555555443
No 77
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.22 E-value=2e-10 Score=95.85 Aligned_cols=88 Identities=14% Similarity=-0.013 Sum_probs=83.1
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~f 213 (224)
+++++|+.+|+++++.+|+++.++..+|.++. ..|++++|+.+|+++++++|++..++..+|.++.. .+++++|+.+|
T Consensus 35 ~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~ 112 (327)
T 3cv0_A 35 ANLAEAALAFEAVCQAAPEREEAWRSLGLTQA-ENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN-EHNANAALASL 112 (327)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 68999999999999999999999999999987 69999999999999999999999999999998765 67999999999
Q ss_pred HHHHHhCCCC
Q 027404 214 DRAVHSAPDD 223 (224)
Q Consensus 214 erAL~l~P~d 223 (224)
+++++++|++
T Consensus 113 ~~~~~~~~~~ 122 (327)
T 3cv0_A 113 RAWLLSQPQY 122 (327)
T ss_dssp HHHHHTSTTT
T ss_pred HHHHHhCCcc
Confidence 9999999975
No 78
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.22 E-value=2.3e-11 Score=117.46 Aligned_cols=87 Identities=7% Similarity=0.006 Sum_probs=79.2
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~f 213 (224)
+++++|+.+|++|++.+|+++.+++++|.++. .+|++++|+++|++|++++|+++.++.++|.++.. .|++++ +.+|
T Consensus 447 g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~-~g~~~~-~~~~ 523 (681)
T 2pzi_A 447 GDVAKATRKLDDLAERVGWRWRLVWYRAVAEL-LTGDYDSATKHFTEVLDTFPGELAPKLALAATAEL-AGNTDE-HKFY 523 (681)
T ss_dssp TCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHH-HTCCCT-TCHH
T ss_pred CCHHHHHHHHHHHhccCcchHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-cCChHH-HHHH
Confidence 78999999999999999999999999999887 69999999999999999999999999999988766 478888 9999
Q ss_pred HHHHHhCCCC
Q 027404 214 DRAVHSAPDD 223 (224)
Q Consensus 214 erAL~l~P~d 223 (224)
++|++++|++
T Consensus 524 ~~al~~~P~~ 533 (681)
T 2pzi_A 524 QTVWSTNDGV 533 (681)
T ss_dssp HHHHHHCTTC
T ss_pred HHHHHhCCch
Confidence 9999999875
No 79
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.22 E-value=1.6e-10 Score=100.70 Aligned_cols=88 Identities=15% Similarity=0.129 Sum_probs=83.5
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~f 213 (224)
+++++|+.+|+++++.+|+++.++..++.++. ..|++++|+.+++++++.+|.++.++..+|.++.. .|++++|+.+|
T Consensus 13 g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~-~~~~~~~a~~~~~~a~~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~ 90 (388)
T 1w3b_A 13 GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHF-QCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKE-RGQLQEAIEHY 90 (388)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHH-CCCHHHHHHHH
Confidence 78999999999999999999999999999887 69999999999999999999999999999998876 57899999999
Q ss_pred HHHHHhCCCC
Q 027404 214 DRAVHSAPDD 223 (224)
Q Consensus 214 erAL~l~P~d 223 (224)
+++++++|++
T Consensus 91 ~~al~~~p~~ 100 (388)
T 1w3b_A 91 RHALRLKPDF 100 (388)
T ss_dssp HHHHHHCTTC
T ss_pred HHHHHcCcch
Confidence 9999999975
No 80
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.21 E-value=3.7e-11 Score=98.40 Aligned_cols=90 Identities=16% Similarity=0.132 Sum_probs=82.3
Q ss_pred CCCCHHHHHHHHHHHHHH----CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChH
Q 027404 132 SGKESESMDVYYQEMIKA----YPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAP 207 (224)
Q Consensus 132 ~~~d~e~A~~~yerALe~----dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~e 207 (224)
..+++++|+.+|+++++. +|.++.+++.+|.++. ..|++++|+.+|++|++++|+++.++..+|.++.. .++++
T Consensus 17 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~-~~~~~ 94 (275)
T 1xnf_A 17 PTLQQEVILARMEQILASRALTDDERAQLLYERGVLYD-SLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQ-AGNFD 94 (275)
T ss_dssp CCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-TTCHH
T ss_pred ccchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHH-HcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH-ccCHH
Confidence 347899999999999998 4567899999999987 69999999999999999999999999999998876 57999
Q ss_pred HHHHHHHHHHHhCCCC
Q 027404 208 RAKSYFDRAVHSAPDD 223 (224)
Q Consensus 208 eA~~~ferAL~l~P~d 223 (224)
+|+.+|+++++++|++
T Consensus 95 ~A~~~~~~al~~~~~~ 110 (275)
T 1xnf_A 95 AAYEAFDSVLELDPTY 110 (275)
T ss_dssp HHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHhcCccc
Confidence 9999999999999975
No 81
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.21 E-value=9.3e-12 Score=89.33 Aligned_cols=81 Identities=14% Similarity=0.093 Sum_probs=70.7
Q ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHcCCh
Q 027404 133 GKESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGD------GNVLSMYGDLIWINHKDA 206 (224)
Q Consensus 133 ~~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~d------a~al~~lG~ll~~~~gd~ 206 (224)
.+++++|+.+|++|++++|+++.+++++|.++. ..|++++|+++|++|++++|++ ..++..+|.++... +++
T Consensus 17 ~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~ 94 (111)
T 2l6j_A 17 QGLYREAVHCYDQLITAQPQNPVGYSNKAMALI-KLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQYRLELAQGAV-GSV 94 (111)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHHHHHHHHHHH-HCC
T ss_pred cCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHH-HhH
Confidence 378999999999999999999999999999987 6999999999999999999999 88888888877654 467
Q ss_pred HHHHHHHHH
Q 027404 207 PRAKSYFDR 215 (224)
Q Consensus 207 eeA~~~fer 215 (224)
++|+..|++
T Consensus 95 ~~a~~~~~~ 103 (111)
T 2l6j_A 95 QIPVVEVDE 103 (111)
T ss_dssp CCCSSSSSS
T ss_pred hhhHhHHHH
Confidence 777766554
No 82
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.20 E-value=7.7e-11 Score=98.11 Aligned_cols=89 Identities=12% Similarity=0.041 Sum_probs=80.7
Q ss_pred CCHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHH-----
Q 027404 134 KESESMDVYYQEMIKAYPED---ALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGD---GNVLSMYGDLIWIN----- 202 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~n---a~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~d---a~al~~lG~ll~~~----- 202 (224)
+++++|+.+|+++++.+|++ +.+++.+|.+++ .+|++++|+.+|+++++..|++ +.+++.+|.+++..
T Consensus 29 g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~-~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~ 107 (261)
T 3qky_A 29 GKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYY-QNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYE 107 (261)
T ss_dssp TCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTT
T ss_pred CCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhccccc
Confidence 79999999999999999999 899999999988 6999999999999999998854 66888999887651
Q ss_pred --cCChHHHHHHHHHHHHhCCCC
Q 027404 203 --HKDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 203 --~gd~eeA~~~ferAL~l~P~d 223 (224)
.+++++|+.+|+++++..|++
T Consensus 108 ~~~~~~~~A~~~~~~~l~~~p~~ 130 (261)
T 3qky_A 108 LDQTDTRKAIEAFQLFIDRYPNH 130 (261)
T ss_dssp SCCHHHHHHHHHHHHHHHHCTTC
T ss_pred ccchhHHHHHHHHHHHHHHCcCc
Confidence 468999999999999999975
No 83
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.20 E-value=1.4e-10 Score=96.91 Aligned_cols=88 Identities=13% Similarity=0.194 Sum_probs=59.5
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRG-DFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSY 212 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~G-d~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~ 212 (224)
+++++|..+|+++++.+|+++.+++.+|.++. ..| ++++|+.+|++++.++|+++.++..+|.++.. .+++++|+.+
T Consensus 70 ~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~ 147 (330)
T 3hym_B 70 NKANELFYLSHKLVDLYPSNPVSWFAVGCYYL-MVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAV-ESEHDQAMAA 147 (330)
T ss_dssp TCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHH-HSCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHH-HTCHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-ccCHHHHHHH
Confidence 46667777777777777777777777776665 466 67777777777777777777777666666554 3566777777
Q ss_pred HHHHHHhCCCC
Q 027404 213 FDRAVHSAPDD 223 (224)
Q Consensus 213 ferAL~l~P~d 223 (224)
|++++++.|++
T Consensus 148 ~~~a~~~~~~~ 158 (330)
T 3hym_B 148 YFTAAQLMKGC 158 (330)
T ss_dssp HHHHHHHTTTC
T ss_pred HHHHHHhcccc
Confidence 77777666653
No 84
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.20 E-value=1.5e-10 Score=94.16 Aligned_cols=88 Identities=23% Similarity=0.296 Sum_probs=63.8
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH--hCCCCHHHHHHHHHHHHHHcCChHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAIL--AKPGDGNVLSMYGDLIWINHKDAPRAKS 211 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~--ldP~da~al~~lG~ll~~~~gd~eeA~~ 211 (224)
+++++|+.+|+++++.+|.++.++.++|.++. ..|++++|+++|++++. ..|.++.++..+|.++.. .+++++|+.
T Consensus 85 ~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~ 162 (252)
T 2ho1_A 85 MEPKLADEEYRKALASDSRNARVLNNYGGFLY-EQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQ-MKKPAQAKE 162 (252)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHH-TTCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHH-HHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHH-cCCHHHHHH
Confidence 56777777777777777777777777777765 57777777777777777 667777777777766654 466777777
Q ss_pred HHHHHHHhCCCC
Q 027404 212 YFDRAVHSAPDD 223 (224)
Q Consensus 212 ~ferAL~l~P~d 223 (224)
+|+++++++|++
T Consensus 163 ~~~~~~~~~~~~ 174 (252)
T 2ho1_A 163 YFEKSLRLNRNQ 174 (252)
T ss_dssp HHHHHHHHCSCC
T ss_pred HHHHHHhcCccc
Confidence 777777777653
No 85
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.20 E-value=7.4e-11 Score=113.98 Aligned_cols=91 Identities=11% Similarity=-0.038 Sum_probs=84.2
Q ss_pred CCCCHHHHHHHHHHHH--------HHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc
Q 027404 132 SGKESESMDVYYQEMI--------KAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINH 203 (224)
Q Consensus 132 ~~~d~e~A~~~yerAL--------e~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~ 203 (224)
..+++++|+.+|++|+ +.+|+++.+++++|.++. .+|++++|+++|++|++++|+++.+|+++|.++.. .
T Consensus 403 ~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~-~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~-~ 480 (681)
T 2pzi_A 403 VLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALL-DLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELL-T 480 (681)
T ss_dssp TTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-H
T ss_pred cccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHH-hcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHH-c
Confidence 4478999999999999 999999999999999987 69999999999999999999999999999998876 5
Q ss_pred CChHHHHHHHHHHHHhCCCCC
Q 027404 204 KDAPRAKSYFDRAVHSAPDDW 224 (224)
Q Consensus 204 gd~eeA~~~ferAL~l~P~d~ 224 (224)
|++++|+..|++|++++|++.
T Consensus 481 g~~~~A~~~~~~al~l~P~~~ 501 (681)
T 2pzi_A 481 GDYDSATKHFTEVLDTFPGEL 501 (681)
T ss_dssp TCHHHHHHHHHHHHHHSTTCS
T ss_pred CCHHHHHHHHHHHHHhCCCCh
Confidence 799999999999999999863
No 86
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.20 E-value=1.9e-10 Score=90.79 Aligned_cols=26 Identities=15% Similarity=0.330 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHH
Q 027404 137 ESMDVYYQEMIKAYPEDALVLANYAK 162 (224)
Q Consensus 137 e~A~~~yerALe~dP~na~~l~nlA~ 162 (224)
++|..+|+++++.+|.++.++.++|.
T Consensus 59 ~~A~~~~~~a~~~~~~~~~~~~~l~~ 84 (225)
T 2vq2_A 59 DKAQESFRQALSIKPDSAEINNNYGW 84 (225)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 33333333333333333333333333
No 87
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.20 E-value=2.1e-10 Score=90.60 Aligned_cols=83 Identities=19% Similarity=0.281 Sum_probs=78.5
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc-CChHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINH-KDAPRAKSY 212 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~-gd~eeA~~~ 212 (224)
+++++|+.+|+++++.+|+++.++..+|.++. ..|++++|+.+|++++..+|+++.++..+|.++.. . +++++|+.+
T Consensus 22 ~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~-~~~~~~~A~~~ 99 (225)
T 2vq2_A 22 QDYRQATASIEDALKSDPKNELAWLVRAEIYQ-YLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCG-RLNRPAESMAY 99 (225)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-TTCCHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhCccchHHHHHHHHHHH-HcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-hcCcHHHHHHH
Confidence 68999999999999999999999999999987 69999999999999999999999999999988765 6 789999999
Q ss_pred HHHHHH
Q 027404 213 FDRAVH 218 (224)
Q Consensus 213 ferAL~ 218 (224)
|+++++
T Consensus 100 ~~~~~~ 105 (225)
T 2vq2_A 100 FDKALA 105 (225)
T ss_dssp HHHHHT
T ss_pred HHHHHc
Confidence 999998
No 88
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.20 E-value=1.6e-10 Score=101.60 Aligned_cols=88 Identities=14% Similarity=0.126 Sum_probs=83.2
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~f 213 (224)
+++++|+.+|+++++.+|.++.+++++|.++. ..|++++|+.+|+++++++|+++.++..+|.++.. .|++++|+.+|
T Consensus 40 g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A~~~~ 117 (450)
T 2y4t_A 40 GQLADALSQFHAAVDGDPDNYIAYYRRATVFL-AMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLK-QGKLDEAEDDF 117 (450)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 78999999999999999999999999999987 69999999999999999999999999999998866 58999999999
Q ss_pred HHHHHhCCCC
Q 027404 214 DRAVHSAPDD 223 (224)
Q Consensus 214 erAL~l~P~d 223 (224)
+++++++|++
T Consensus 118 ~~~~~~~~~~ 127 (450)
T 2y4t_A 118 KKVLKSNPSE 127 (450)
T ss_dssp HHHHTSCCCH
T ss_pred HHHHhcCCCC
Confidence 9999999964
No 89
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.19 E-value=2.9e-10 Score=92.52 Aligned_cols=88 Identities=17% Similarity=0.185 Sum_probs=61.2
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~f 213 (224)
+++++|+.+|+++++.+|.++.++..+|.++. ..|++++|+.+|+++++.+|++..++..++.++.. .+++++|+.+|
T Consensus 155 g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~A~~~~ 232 (252)
T 2ho1_A 155 KKPAQAKEYFEKSLRLNRNQPSVALEMADLLY-KEREYVPARQYYDLFAQGGGQNARSLLLGIRLAKV-FEDRDTAASYG 232 (252)
T ss_dssp TCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCcccHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHH-ccCHHHHHHHH
Confidence 56677777777777777777777777776665 46777777777777777777777776666665543 46677777777
Q ss_pred HHHHHhCCCC
Q 027404 214 DRAVHSAPDD 223 (224)
Q Consensus 214 erAL~l~P~d 223 (224)
++++++.|++
T Consensus 233 ~~~~~~~p~~ 242 (252)
T 2ho1_A 233 LQLKRLYPGS 242 (252)
T ss_dssp HHHHHHCTTS
T ss_pred HHHHHHCCCC
Confidence 7777777654
No 90
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.19 E-value=2.1e-10 Score=106.75 Aligned_cols=88 Identities=15% Similarity=0.038 Sum_probs=83.3
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc---CChHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINH---KDAPRAK 210 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~---gd~eeA~ 210 (224)
+++++|+.+|++|++++|+++.+++++|.++. ..|++++|+++|++|++++|+++.++.+++.++.. . +++++|+
T Consensus 71 g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~~~~g~~~~A~ 148 (568)
T 2vsy_A 71 QRHAEAAVLLQQASDAAPEHPGIALWLGHALE-DAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRR-LCDWRALDVLS 148 (568)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCCTTHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-hhccccHHHHH
Confidence 68999999999999999999999999999987 69999999999999999999999999999998765 5 7899999
Q ss_pred HHHHHHHHhCCCC
Q 027404 211 SYFDRAVHSAPDD 223 (224)
Q Consensus 211 ~~ferAL~l~P~d 223 (224)
++|+++++.+|++
T Consensus 149 ~~~~~al~~~p~~ 161 (568)
T 2vsy_A 149 AQVRAAVAQGVGA 161 (568)
T ss_dssp HHHHHHHHHTCCC
T ss_pred HHHHHHHhcCCcc
Confidence 9999999999975
No 91
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.18 E-value=2.9e-10 Score=95.57 Aligned_cols=89 Identities=15% Similarity=0.080 Sum_probs=83.8
Q ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHH
Q 027404 133 GKESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSY 212 (224)
Q Consensus 133 ~~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~ 212 (224)
.+++++|+.+|+++++.+|+++.++.++|.++. ..|++++|+.+|++++..+|+++.++..+|.++.. .+++++|+.+
T Consensus 133 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~ 210 (359)
T 3ieg_A 133 GADYTAAITFLDKILEVCVWDAELRELRAECFI-KEGEPRKAISDLKAASKLKSDNTEAFYKISTLYYQ-LGDHELSLSE 210 (359)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTTCSCCHHHHHHHHHHHHH-HTCHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHH-HCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHHHHHHH
Confidence 368999999999999999999999999999987 69999999999999999999999999999998876 5789999999
Q ss_pred HHHHHHhCCCC
Q 027404 213 FDRAVHSAPDD 223 (224)
Q Consensus 213 ferAL~l~P~d 223 (224)
|+++++++|++
T Consensus 211 ~~~a~~~~~~~ 221 (359)
T 3ieg_A 211 VRECLKLDQDH 221 (359)
T ss_dssp HHHHHHHCTTC
T ss_pred HHHHHhhCccc
Confidence 99999999975
No 92
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.18 E-value=1.7e-10 Score=96.43 Aligned_cols=87 Identities=15% Similarity=0.134 Sum_probs=67.8
Q ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHHH
Q 027404 135 ESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFD 214 (224)
Q Consensus 135 d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~fe 214 (224)
++++|+.+|+++++.+|.++.++..+|.++. ..|++++|+.+|+++++..|++..++..+|.++.. .+++++|+.+|+
T Consensus 106 ~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~ 183 (330)
T 3hym_B 106 KNEHARRYLSKATTLEKTYGPAWIAYGHSFA-VESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGL-TNNSKLAERFFS 183 (330)
T ss_dssp CHHHHHHHHHHHHTTCTTCTHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhccccHHHHHHHHHHHHH-HhhHHHHHHHHH
Confidence 6778888888888888888888888887776 57888888888888888888877777777776654 467888888888
Q ss_pred HHHHhCCCC
Q 027404 215 RAVHSAPDD 223 (224)
Q Consensus 215 rAL~l~P~d 223 (224)
++++++|++
T Consensus 184 ~al~~~~~~ 192 (330)
T 3hym_B 184 QALSIAPED 192 (330)
T ss_dssp HHHTTCTTC
T ss_pred HHHHhCCCC
Confidence 888877764
No 93
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.18 E-value=3.1e-10 Score=78.63 Aligned_cols=65 Identities=22% Similarity=0.332 Sum_probs=34.3
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLI 199 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll 199 (224)
+++++|+.+|++|++.+|+++.+++++|.++. ..|++++|+.+|+++++++|+++.++.++|.++
T Consensus 23 ~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~ 87 (91)
T 1na3_A 23 GDYDEAIEYYQKALELDPNNAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPNNAEAKQNLGNAK 87 (91)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH-HHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 34555555555555555555555555555544 355555555555555555555555555555443
No 94
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.17 E-value=9e-11 Score=89.44 Aligned_cols=69 Identities=16% Similarity=0.189 Sum_probs=63.3
Q ss_pred CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC
Q 027404 153 DALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 153 na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~ferAL~l~P~d 223 (224)
.+.++.++|.+++ .+|++++|+.+|++||+++|+++.+|.++|.+++. .+++++|+.+|++|++++|++
T Consensus 7 ~A~a~~~lG~~~~-~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~-~~~~~~A~~~~~~al~~~~~~ 75 (127)
T 4gcn_A 7 AAIAEKDLGNAAY-KQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFE-EKKFAECVQFCEKAVEVGRET 75 (127)
T ss_dssp HHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHH-hhhHHHHHHHHHHHHHhCccc
Confidence 4678889999998 69999999999999999999999999999998876 579999999999999998864
No 95
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.17 E-value=2.3e-11 Score=96.36 Aligned_cols=88 Identities=11% Similarity=-0.039 Sum_probs=68.5
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHH----------------------------------HHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAE----------------------------------EYCG 179 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe----------------------------------~~~e 179 (224)
+++++|+.+|+++++.+|+++.+++++|.++. ..|++++|+ .+|+
T Consensus 20 g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~-~~g~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~a~~~~~ 98 (176)
T 2r5s_A 20 GEHAQALNVIQTLSDELQSRGDVKLAKADCLL-ETKQFELAQELLATIPLEYQDNSYKSLIAKLELHQQAAESPELKRLE 98 (176)
T ss_dssp TCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHH-HTTCHHHHHHHHTTCCGGGCCHHHHHHHHHHHHHHHHTSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHH-HCCCHHHHHHHHHHhhhccCChHHHHHHHHHHHHhhcccchHHHHHH
Confidence 67888888888888888888888888888776 577766554 4455
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC
Q 027404 180 RAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 180 rAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~ferAL~l~P~d 223 (224)
++++++|+++.++..+|.++.. .|++++|+.+|+++++++|+.
T Consensus 99 ~al~~~P~~~~~~~~la~~~~~-~g~~~~A~~~~~~~l~~~p~~ 141 (176)
T 2r5s_A 99 QELAANPDNFELACELAVQYNQ-VGRDEEALELLWNILKVNLGA 141 (176)
T ss_dssp HHHHHSTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTTCTTT
T ss_pred HHHHhCCCCHHHHHHHHHHHHH-cccHHHHHHHHHHHHHhCccc
Confidence 5666778888888888877655 578899999999999888863
No 96
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.16 E-value=1e-10 Score=100.62 Aligned_cols=86 Identities=17% Similarity=0.227 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHHH-HCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHHcCChHHHHHHH
Q 027404 136 SESMDVYYQEMIK-AYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGN-VLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 136 ~e~A~~~yerALe-~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~-al~~lG~ll~~~~gd~eeA~~~f 213 (224)
+++|...|++||+ ++|+++.+|.++|.++. .+|++++|+++|++||+++|+++. +|..++.++.. .+++++|+.+|
T Consensus 80 ~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~-~~~~~~A~~~~ 157 (308)
T 2ond_A 80 SDEAANIYERAISTLLKKNMLLYFAYADYEE-SRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARR-AEGIKSGRMIF 157 (308)
T ss_dssp HHHHHHHHHHHHTTTTTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHH-HHCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCcccHHHHHHHHHHHH-hcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHH-hcCHHHHHHHH
Confidence 4889999999999 69999999999998876 689999999999999999999886 88889887755 46788888888
Q ss_pred HHHHHhCCCC
Q 027404 214 DRAVHSAPDD 223 (224)
Q Consensus 214 erAL~l~P~d 223 (224)
++|++++|.+
T Consensus 158 ~~a~~~~p~~ 167 (308)
T 2ond_A 158 KKAREDARTR 167 (308)
T ss_dssp HHHHTSTTCC
T ss_pred HHHHhcCCCC
Confidence 8888888764
No 97
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.16 E-value=3.2e-10 Score=99.74 Aligned_cols=88 Identities=16% Similarity=0.175 Sum_probs=81.7
Q ss_pred CCHHHHHHHHHHHHHHCCCCHH----HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDAL----VLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRA 209 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~----~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA 209 (224)
+++++|+.+|+++++.+|+++. ++.++|.++. ..|++++|+.+|+++++++|+++.+|..+|.++.. .+++++|
T Consensus 271 g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~-~~~~~~A 348 (450)
T 2y4t_A 271 GRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFS-KDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLI-EEMYDEA 348 (450)
T ss_dssp TCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHH
T ss_pred CCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH-hcCHHHH
Confidence 6899999999999999999964 7888999887 69999999999999999999999999999998865 6899999
Q ss_pred HHHHHHHHHhCCCC
Q 027404 210 KSYFDRAVHSAPDD 223 (224)
Q Consensus 210 ~~~ferAL~l~P~d 223 (224)
+.+|+++++++|++
T Consensus 349 ~~~~~~al~~~p~~ 362 (450)
T 2y4t_A 349 IQDYETAQEHNEND 362 (450)
T ss_dssp HHHHHHHHTTSSSC
T ss_pred HHHHHHHHHhCcch
Confidence 99999999999986
No 98
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.16 E-value=1.3e-10 Score=95.41 Aligned_cols=87 Identities=9% Similarity=0.055 Sum_probs=58.9
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC----HHHHHHHHHHHHHHcCChHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGD----GNVLSMYGDLIWINHKDAPRA 209 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~d----a~al~~lG~ll~~~~gd~eeA 209 (224)
+++++|+.+|+++++.+|+++.++..+|.++. ..|++++|+.+|++++. .|.+ +.++..+|.++.. .+++++|
T Consensus 17 ~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~~~lg~~~~~-~~~~~~A 93 (272)
T 3u4t_A 17 NNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYY-ELAKYDLAQKDIETYFS-KVNATKAKSADFEYYGKILMK-KGQDSLA 93 (272)
T ss_dssp TCHHHHHHHHHHHHHTTCCCSTTHHHHHHHHH-HTTCHHHHHHHHHHHHT-TSCTTTCCHHHHHHHHHHHHH-TTCHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HHhhHHHHHHHHHHHHh-ccCchhHHHHHHHHHHHHHHH-cccHHHH
Confidence 56777777777777777777777777777665 57777777777777776 3333 3336667766554 4667777
Q ss_pred HHHHHHHHHhCCCC
Q 027404 210 KSYFDRAVHSAPDD 223 (224)
Q Consensus 210 ~~~ferAL~l~P~d 223 (224)
+.+|+++++++|++
T Consensus 94 ~~~~~~a~~~~~~~ 107 (272)
T 3u4t_A 94 IQQYQAAVDRDTTR 107 (272)
T ss_dssp HHHHHHHHHHSTTC
T ss_pred HHHHHHHHhcCccc
Confidence 77777777777754
No 99
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.16 E-value=2e-10 Score=98.81 Aligned_cols=86 Identities=16% Similarity=0.179 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHH------HcCCH-------HHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHH
Q 027404 137 ESMDVYYQEMIKAYPEDALVLANYAKFLKE------IRGDF-------VKAEEYCGRAIL-AKPGDGNVLSMYGDLIWIN 202 (224)
Q Consensus 137 e~A~~~yerALe~dP~na~~l~nlA~~l~e------~~Gd~-------eeAe~~~erAL~-ldP~da~al~~lG~ll~~~ 202 (224)
++|+..|++||+.+|+++.+|++||.++.. ..|++ ++|+.+|++|++ ++|++..+|..+|.++..
T Consensus 33 ~~a~~~~~~al~~~p~~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~- 111 (308)
T 2ond_A 33 KRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEES- 111 (308)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCcccHHHHHHHHHHHHh-
Confidence 789999999999999999999999998753 24885 899999999999 799999999999988755
Q ss_pred cCChHHHHHHHHHHHHhCCCC
Q 027404 203 HKDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 203 ~gd~eeA~~~ferAL~l~P~d 223 (224)
.+++++|+..|++|++++|++
T Consensus 112 ~~~~~~A~~~~~~al~~~p~~ 132 (308)
T 2ond_A 112 RMKYEKVHSIYNRLLAIEDID 132 (308)
T ss_dssp TTCHHHHHHHHHHHHTSSSSC
T ss_pred cCCHHHHHHHHHHHHhccccC
Confidence 679999999999999999975
No 100
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.15 E-value=4.3e-10 Score=85.38 Aligned_cols=84 Identities=15% Similarity=-0.052 Sum_probs=75.0
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH--HHHHcCChHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDL--IWINHKDAPRAKS 211 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~l--l~~~~gd~eeA~~ 211 (224)
+++++|+.+|+++++.+|.++.+++++|.++. ..|++++|+.+|+++++++|++..++..++.+ +.. .+++++|+.
T Consensus 61 ~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~-~~~~~~A~~ 138 (166)
T 1a17_A 61 ECYGYALGDATRAIELDKKYIKGYYRRAASNM-ALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVK-QKAFERAIA 138 (166)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCcccHHHHHHHHHHHH-HhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 68999999999999999999999999999987 69999999999999999999999998666554 444 468999999
Q ss_pred HHHHHHHh
Q 027404 212 YFDRAVHS 219 (224)
Q Consensus 212 ~ferAL~l 219 (224)
+++++..+
T Consensus 139 ~~~~~~~~ 146 (166)
T 1a17_A 139 GDEHKRSV 146 (166)
T ss_dssp HHHHHHHH
T ss_pred cccchHHH
Confidence 99988764
No 101
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.15 E-value=2.9e-10 Score=78.74 Aligned_cols=70 Identities=21% Similarity=0.365 Sum_probs=64.4
Q ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC
Q 027404 152 EDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 152 ~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~ferAL~l~P~d 223 (224)
.++.+++++|.++. ..|++++|+.+|++|++++|+++.++..+|.++.. .+++++|+.+|+++++++|++
T Consensus 7 ~~~~~~~~la~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~p~~ 76 (91)
T 1na3_A 7 NSAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYK-QGDYDEAIEYYQKALELDPNN 76 (91)
T ss_dssp HHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTC
T ss_pred ccHHHHHHHHHHHH-HccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-HhhHHHHHHHHHHHHhcCCCC
Confidence 46789999999887 69999999999999999999999999999998866 579999999999999999975
No 102
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.14 E-value=5.4e-10 Score=99.23 Aligned_cols=87 Identities=17% Similarity=0.084 Sum_probs=81.4
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~f 213 (224)
+++++|+.+|+++++.+| ++.++.++|.++. ..|++++|+.+|+++++++|++..++..+|.++.. .|++++|+.+|
T Consensus 20 g~~~~A~~~~~~al~~~p-~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A~~~~ 96 (514)
T 2gw1_A 20 KKYDDAIKYYNWALELKE-DPVFYSNLSACYV-SVGDLKKVVEMSTKALELKPDYSKVLLRRASANEG-LGKFADAMFDL 96 (514)
T ss_dssp SCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhcCc-cHHHHHhHHHHHH-HHhhHHHHHHHHHHHhccChHHHHHHHHHHHHHHH-HhhHHHHHHHH
Confidence 689999999999999999 6999999999987 69999999999999999999999999999998876 57999999999
Q ss_pred HHHHHhCCCC
Q 027404 214 DRAVHSAPDD 223 (224)
Q Consensus 214 erAL~l~P~d 223 (224)
+++++++|.+
T Consensus 97 ~~~~~~~~~~ 106 (514)
T 2gw1_A 97 SVLSLNGDFN 106 (514)
T ss_dssp HHHHHSSSCC
T ss_pred HHHHhcCCCc
Confidence 9999998853
No 103
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.13 E-value=2.9e-10 Score=93.55 Aligned_cols=89 Identities=20% Similarity=0.135 Sum_probs=79.4
Q ss_pred CCHHHHHHHHHHHHHHCCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH---HHHHHHHHHHHH-----
Q 027404 134 KESESMDVYYQEMIKAYPEDA---LVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGN---VLSMYGDLIWIN----- 202 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na---~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~---al~~lG~ll~~~----- 202 (224)
+++++|+.+|+++++.+|+++ .+++++|.+++ .+|++++|+.+|+++++.+|+++. +++.+|.++...
T Consensus 18 g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~-~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~~ 96 (225)
T 2yhc_A 18 GNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYY-KNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSAL 96 (225)
T ss_dssp TCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC---
T ss_pred CCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhhh
Confidence 789999999999999999874 79999999987 699999999999999999999865 788888877642
Q ss_pred ------------cCChHHHHHHHHHHHHhCCCC
Q 027404 203 ------------HKDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 203 ------------~gd~eeA~~~ferAL~l~P~d 223 (224)
.+++++|+.+|+++++..|++
T Consensus 97 ~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~ 129 (225)
T 2yhc_A 97 QGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNS 129 (225)
T ss_dssp -----------CCHHHHHHHHHHHHHHTTCTTC
T ss_pred hhhhccchhhcCcHHHHHHHHHHHHHHHHCcCC
Confidence 357999999999999999985
No 104
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.12 E-value=3.7e-10 Score=89.33 Aligned_cols=79 Identities=15% Similarity=0.107 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHHcCChHHHHHHHHH
Q 027404 138 SMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGD--GNVLSMYGDLIWINHKDAPRAKSYFDR 215 (224)
Q Consensus 138 ~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~d--a~al~~lG~ll~~~~gd~eeA~~~fer 215 (224)
.|+.+|+++++.+|+++.+++++|.++. ..|++++|+.+|+++++++|++ +.++.+++.++.. .|+.++|+..|++
T Consensus 92 ~a~~~~~~al~~~P~~~~~~~~la~~~~-~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~-~g~~~~A~~~y~~ 169 (176)
T 2r5s_A 92 PELKRLEQELAANPDNFELACELAVQYN-QVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSA-LGQGNAIASKYRR 169 (176)
T ss_dssp HHHHHHHHHHHHSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHH-HCSSCHHHHHHHH
T ss_pred hHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHH-hCCCCcHHHHHHH
Confidence 4799999999999999999999999987 6999999999999999999986 5689999988765 5789999999999
Q ss_pred HHH
Q 027404 216 AVH 218 (224)
Q Consensus 216 AL~ 218 (224)
++.
T Consensus 170 al~ 172 (176)
T 2r5s_A 170 QLY 172 (176)
T ss_dssp HHH
T ss_pred HHH
Confidence 985
No 105
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.12 E-value=3.3e-10 Score=84.09 Aligned_cols=71 Identities=17% Similarity=0.067 Sum_probs=65.4
Q ss_pred CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC
Q 027404 151 PEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 151 P~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~ferAL~l~P~d 223 (224)
|.++..+.++|..++ ..|++++|+.+|++||+++|+++.++.++|.++.. .+++++|+.+|++|++++|++
T Consensus 1 p~~a~~~~~~g~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~-~~~~~~A~~~~~~al~~~p~~ 71 (126)
T 3upv_A 1 SMKAEEARLEGKEYF-TKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAK-LMSFPEAIADCNKAIEKDPNF 71 (126)
T ss_dssp CHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTC
T ss_pred CchHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-hcCHHHHHHHHHHHHHhCCCc
Confidence 456788999999988 69999999999999999999999999999998876 578999999999999999986
No 106
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.12 E-value=3.2e-10 Score=81.18 Aligned_cols=69 Identities=12% Similarity=0.008 Sum_probs=63.8
Q ss_pred CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC
Q 027404 153 DALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 153 na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~ferAL~l~P~d 223 (224)
++.+++++|.++. ..|++++|+++|++|++++|+++.++.++|.++.. .+++++|+.+|+++++++|++
T Consensus 3 ~~~~~~~~g~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 3 QFEKQKEQGNSLF-KQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIK-LGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTSCSST
T ss_pred hHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHhCCCc
Confidence 4678999999987 69999999999999999999999999999998876 579999999999999999985
No 107
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.12 E-value=4.7e-10 Score=93.31 Aligned_cols=88 Identities=20% Similarity=0.054 Sum_probs=78.7
Q ss_pred CCHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHHHH--------cCCHHHHHHHHHHHHHhCCCCHHHH----------
Q 027404 134 KESESMDVYYQEMIKAYPED---ALVLANYAKFLKEI--------RGDFVKAEEYCGRAILAKPGDGNVL---------- 192 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~n---a~~l~nlA~~l~e~--------~Gd~eeAe~~~erAL~ldP~da~al---------- 192 (224)
+++++|+.+|+++|+.+|++ +.+++.+|.++. . +|++++|+.+|+++++..|++..+.
T Consensus 66 ~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~-~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~ 144 (261)
T 3qky_A 66 KEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYY-KLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELR 144 (261)
T ss_dssp TCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHH-HHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHH-HhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHH
Confidence 68999999999999998865 578999999886 7 8999999999999999999987666
Q ss_pred -------HHHHHHHHHHcCChHHHHHHHHHHHHhCCCC
Q 027404 193 -------SMYGDLIWINHKDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 193 -------~~lG~ll~~~~gd~eeA~~~ferAL~l~P~d 223 (224)
..+|.++.. .|++++|+.+|+++++..|++
T Consensus 145 ~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~l~~~p~~ 181 (261)
T 3qky_A 145 AKLARKQYEAARLYER-RELYEAAAVTYEAVFDAYPDT 181 (261)
T ss_dssp HHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHHCCCC
Confidence 777888765 689999999999999999974
No 108
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.11 E-value=2.4e-10 Score=102.63 Aligned_cols=87 Identities=20% Similarity=0.169 Sum_probs=76.1
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~f 213 (224)
+++++|+.+|+++++.+|+++.+++++|.++. .+|++++|+++|+++++++|+++.++..+|.++.. .|++++|+..|
T Consensus 39 g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~g~~~~A~~~~ 116 (537)
T 3fp2_A 39 KNFNEAIKYYQYAIELDPNEPVFYSNISACYI-STGDLEKVIEFTTKALEIKPDHSKALLRRASANES-LGNFTDAMFDL 116 (537)
T ss_dssp TCCC-CHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHH-HcCCHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 67899999999999999999999999999987 69999999999999999999999999999998876 57899999999
Q ss_pred HHHHHhCCCC
Q 027404 214 DRAVHSAPDD 223 (224)
Q Consensus 214 erAL~l~P~d 223 (224)
+ ++.++|+.
T Consensus 117 ~-~~~~~~~~ 125 (537)
T 3fp2_A 117 S-VLSLNGDF 125 (537)
T ss_dssp H-HHC-----
T ss_pred H-HHhcCCCC
Confidence 5 88888763
No 109
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.10 E-value=1.1e-09 Score=94.73 Aligned_cols=89 Identities=8% Similarity=-0.115 Sum_probs=76.6
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLK-EIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSY 212 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~-e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~ 212 (224)
+++++|+.+|+++++.+|++..+....+++.. ...|++++|+.+|+++++..|+++.++.++|.++.. .|++++|+.+
T Consensus 144 g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~-~g~~~eA~~~ 222 (291)
T 3mkr_A 144 DRLDLARKELKKMQDQDEDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMA-QGRWEAAEGV 222 (291)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHH-TTCHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-cCCHHHHHHH
Confidence 79999999999999999999765554443221 135899999999999999999999999999988766 5899999999
Q ss_pred HHHHHHhCCCC
Q 027404 213 FDRAVHSAPDD 223 (224)
Q Consensus 213 ferAL~l~P~d 223 (224)
|++|++++|++
T Consensus 223 l~~al~~~p~~ 233 (291)
T 3mkr_A 223 LQEALDKDSGH 233 (291)
T ss_dssp HHHHHHHCTTC
T ss_pred HHHHHHhCCCC
Confidence 99999999986
No 110
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.09 E-value=1.1e-09 Score=97.30 Aligned_cols=89 Identities=15% Similarity=0.127 Sum_probs=73.4
Q ss_pred CCHHHHHHHHHHHHHH---------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKA---------YPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILA--------KPGDGNVLSMYG 196 (224)
Q Consensus 134 ~d~e~A~~~yerALe~---------dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~l--------dP~da~al~~lG 196 (224)
|++++|+.+|++|+++ +|....++.|+|.+++ .+|++++|+.+|++|+++ .+..+.++.++|
T Consensus 65 G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~-~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~~~~~~~g 143 (472)
T 4g1t_A 65 GQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYY-HMGRLSDVQIYVDKVKHVCEKFSSPYRIESPELDCEEG 143 (472)
T ss_dssp TCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSCCSSCCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHH-HcCChHHHHHHHHHHHHHhHhcccccchhhHHHHHHHH
Confidence 6889999999999987 7778889999999887 689999999999999886 345678888888
Q ss_pred HHHHHHc-CChHHHHHHHHHHHHhCCCC
Q 027404 197 DLIWINH-KDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 197 ~ll~~~~-gd~eeA~~~ferAL~l~P~d 223 (224)
.++.... +++++|+.+|++|++++|++
T Consensus 144 ~~~~~~~~~~y~~A~~~~~kal~~~p~~ 171 (472)
T 4g1t_A 144 WTRLKCGGNQNERAKVCFEKALEKKPKN 171 (472)
T ss_dssp HHHHHHCTTHHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHccccHHHHHHHHHHHHHhCCCC
Confidence 7665543 46889999999999999875
No 111
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.09 E-value=9.4e-10 Score=100.49 Aligned_cols=88 Identities=14% Similarity=0.111 Sum_probs=82.0
Q ss_pred CCHHHHHHHHHHHHHH------CCCC-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCh
Q 027404 134 KESESMDVYYQEMIKA------YPED-ALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDA 206 (224)
Q Consensus 134 ~d~e~A~~~yerALe~------dP~n-a~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~ 206 (224)
+++++|+.+|+++++. +|++ +.++.+++.++. ..|++++|+++|+++++++|+++.+|..++.++.. .|++
T Consensus 489 g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~-~g~~ 566 (597)
T 2xpi_A 489 SDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYR-KLKMYDAAIDALNQGLLLSTNDANVHTAIALVYLH-KKIP 566 (597)
T ss_dssp TCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHH-TTCH
T ss_pred CCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-hCCH
Confidence 7899999999999999 7775 789999999987 69999999999999999999999999999998866 6899
Q ss_pred HHHHHHHHHHHHhCCCC
Q 027404 207 PRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 207 eeA~~~ferAL~l~P~d 223 (224)
++|+.+|+++++++|++
T Consensus 567 ~~A~~~~~~~l~~~p~~ 583 (597)
T 2xpi_A 567 GLAITHLHESLAISPNE 583 (597)
T ss_dssp HHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHhcCCCC
Confidence 99999999999999986
No 112
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.09 E-value=8.2e-10 Score=99.09 Aligned_cols=88 Identities=15% Similarity=0.206 Sum_probs=72.2
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~f 213 (224)
+++++|+.+|+++++.+|+++.++.++|.++. ..|++++|+.+|++++.++|+++.++..+|.++.. .|++++|+.+|
T Consensus 290 ~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~ 367 (537)
T 3fp2_A 290 ENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYF-ILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYK-QGKFTESEAFF 367 (537)
T ss_dssp SCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred cCHHHHHHHHHHHhccCCCCHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 67788888888888888888888888888776 58888888888888888888888888888877655 56788888888
Q ss_pred HHHHHhCCCC
Q 027404 214 DRAVHSAPDD 223 (224)
Q Consensus 214 erAL~l~P~d 223 (224)
+++++++|++
T Consensus 368 ~~~~~~~~~~ 377 (537)
T 3fp2_A 368 NETKLKFPTL 377 (537)
T ss_dssp HHHHHHCTTC
T ss_pred HHHHHhCCCC
Confidence 8888888865
No 113
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.08 E-value=1.2e-09 Score=81.24 Aligned_cols=74 Identities=16% Similarity=0.074 Sum_probs=66.9
Q ss_pred HHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC
Q 027404 148 KAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 148 e~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~ferAL~l~P~d 223 (224)
..+|.++..++.+|.++. ..|++++|+.+|++++.++|+++.++.++|.++.. .+++++|+.+|+++++++|++
T Consensus 3 ~~~~~~~~~~~~~g~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~al~~~p~~ 76 (137)
T 3q49_B 3 HMKSPSAQELKEQGNRLF-VGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLK-MQQPEQALADCRRALELDGQS 76 (137)
T ss_dssp ---CCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTC
T ss_pred CCccccHHHHHHHHHHHH-HhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHhCchh
Confidence 467889999999999988 69999999999999999999999999999998876 579999999999999999975
No 114
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.08 E-value=2.2e-10 Score=98.23 Aligned_cols=88 Identities=15% Similarity=0.168 Sum_probs=74.7
Q ss_pred CCHHHHHHHHHHHHHHCCCC------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-------HHHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPED------ALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGN-------VLSMYGDLIW 200 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~n------a~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~-------al~~lG~ll~ 200 (224)
+++++|+.+|++|+++.|.+ +.++.++|.++. .+|++++|+.+|++++++.|++.. ++.++|.++.
T Consensus 132 g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~ 210 (292)
T 1qqe_A 132 HDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKA-LDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQL 210 (292)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHH
Confidence 68999999999999998865 578999999987 699999999999999999998754 5677888776
Q ss_pred HHcCChHHHHHHHHHHHHhCCCC
Q 027404 201 INHKDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 201 ~~~gd~eeA~~~ferAL~l~P~d 223 (224)
. .|++++|+.+|+++++++|+.
T Consensus 211 ~-~g~~~~A~~~~~~al~l~p~~ 232 (292)
T 1qqe_A 211 A-ATDAVAAARTLQEGQSEDPNF 232 (292)
T ss_dssp H-TTCHHHHHHHHHGGGCC----
T ss_pred H-cCCHHHHHHHHHHHHhhCCCC
Confidence 5 589999999999999999964
No 115
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.08 E-value=3.3e-10 Score=80.07 Aligned_cols=72 Identities=11% Similarity=0.150 Sum_probs=66.9
Q ss_pred HCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC
Q 027404 149 AYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPD 222 (224)
Q Consensus 149 ~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~ferAL~l~P~ 222 (224)
++|+++.+++.+|.++. ..|++++|+.+|+++++++|++..++..+|.++.. .+++++|+.+|+++++++|+
T Consensus 1 l~p~~~~~~~~~~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~a~~~~~~ 72 (112)
T 2kck_A 1 MVDQNPEEYYLEGVLQY-DAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYN-LERYEEAVDCYNYVINVIED 72 (112)
T ss_dssp CCCSSTTGGGGHHHHHH-SSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHTSCC
T ss_pred CCCCcHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHhCcc
Confidence 37999999999999987 69999999999999999999999999999998766 57899999999999999997
No 116
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.08 E-value=4e-10 Score=96.63 Aligned_cols=88 Identities=15% Similarity=0.103 Sum_probs=75.0
Q ss_pred CCHHHHHHHHHHHHHHCCCC------HHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPED------ALVLANYAKFLKEIR-GDFVKAEEYCGRAILAKPGD------GNVLSMYGDLIW 200 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~n------a~~l~nlA~~l~e~~-Gd~eeAe~~~erAL~ldP~d------a~al~~lG~ll~ 200 (224)
+++++|+.+|++||++.|.. +.++.++|.++. .+ |++++|+.+|++|+++.|.+ +.++.++|.++.
T Consensus 91 g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~-~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~ 169 (292)
T 1qqe_A 91 GNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILE-NDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKA 169 (292)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHH
Confidence 68999999999999988754 468889998876 55 99999999999999998865 567888998876
Q ss_pred HHcCChHHHHHHHHHHHHhCCCC
Q 027404 201 INHKDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 201 ~~~gd~eeA~~~ferAL~l~P~d 223 (224)
. .|++++|+.+|++++++.|++
T Consensus 170 ~-~g~~~~A~~~~~~al~~~~~~ 191 (292)
T 1qqe_A 170 L-DGQYIEASDIYSKLIKSSMGN 191 (292)
T ss_dssp H-TTCHHHHHHHHHHHHHTTSSC
T ss_pred H-hCCHHHHHHHHHHHHHHHhcC
Confidence 6 578999999999999998864
No 117
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.07 E-value=7.5e-11 Score=104.45 Aligned_cols=89 Identities=11% Similarity=0.030 Sum_probs=47.5
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~f 213 (224)
+++++|+.+|++||+++|+++.+++++|.++. .+|++++|+.+|++|++++|++..++..++.+.....+..++|..+|
T Consensus 244 g~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~-~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~~~a~~~~ 322 (338)
T 2if4_A 244 KRYDEAIGHCNIVLTEEEKNPKALFRRGKAKA-ELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKALYQKQKEMY 322 (338)
T ss_dssp TCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-TTTCHHHHHHHHHHTTC------------------------------
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999987 69999999999999999999999999999887655567789999999
Q ss_pred HHHHHhCCCC
Q 027404 214 DRAVHSAPDD 223 (224)
Q Consensus 214 erAL~l~P~d 223 (224)
++++..+|++
T Consensus 323 ~~~l~~~p~~ 332 (338)
T 2if4_A 323 KGIFKGKDEG 332 (338)
T ss_dssp ----------
T ss_pred HHhhCCCCCC
Confidence 9999999975
No 118
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.07 E-value=8.5e-10 Score=81.76 Aligned_cols=72 Identities=17% Similarity=0.039 Sum_probs=65.6
Q ss_pred CCCCHHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC
Q 027404 150 YPEDALVLANYAKFLKEIRGD---FVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 150 dP~na~~l~nlA~~l~e~~Gd---~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~ferAL~l~P~d 223 (224)
+|++++++..||.+++ ..++ .++|+.+|++|++++|+++.++..+|.+++. .|+|++|+.+|+++++.+|.+
T Consensus 2 ~p~~~~~~~~~a~al~-~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~-~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 2 NAVTATQLAAKATTLY-YLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFI-SFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp CCCCHHHHHHHHHHHH-HTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTCCCTT
T ss_pred CCCCHHHHHHHHHHHH-HhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhCCCC
Confidence 7999999999999997 4555 6899999999999999999999999998876 689999999999999999973
No 119
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.06 E-value=7.7e-10 Score=86.12 Aligned_cols=72 Identities=15% Similarity=0.067 Sum_probs=66.4
Q ss_pred CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC
Q 027404 150 YPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 150 dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~ferAL~l~P~d 223 (224)
++.++.+++.+|.+++ ..|++++|+.+|++||+++|+++.+|.++|.+++. .+++++|+.+|++|++++|++
T Consensus 7 ~~~~a~~~~~~g~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~p~~ 78 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAM-ARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSA-SGQHEKAAEDAELATVVDPKY 78 (164)
T ss_dssp CCHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTC
T ss_pred hhhhHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHhCCCC
Confidence 5667889999999988 69999999999999999999999999999998876 579999999999999999986
No 120
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.05 E-value=1.2e-09 Score=96.38 Aligned_cols=83 Identities=7% Similarity=-0.021 Sum_probs=75.3
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHH-HHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRA-KSY 212 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA-~~~ 212 (224)
+++++|+.+|++||+++|+++.+++++|.++. ..|++++|+.+|++|++++|++..++..++.++..+ +++++| ...
T Consensus 210 g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~-~~~~~a~~~~ 287 (336)
T 1p5q_A 210 QAFSAAIESCNKALELDSNNEKGLSRRGEAHL-AVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRI-RRQLAREKKL 287 (336)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHH-HHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 79999999999999999999999999999987 699999999999999999999999999999887664 578888 557
Q ss_pred HHHHHH
Q 027404 213 FDRAVH 218 (224)
Q Consensus 213 ferAL~ 218 (224)
|++++.
T Consensus 288 ~~~~~~ 293 (336)
T 1p5q_A 288 YANMFE 293 (336)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 777664
No 121
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.02 E-value=2.4e-09 Score=97.72 Aligned_cols=87 Identities=13% Similarity=0.054 Sum_probs=46.4
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~f 213 (224)
+++++|..+|+++++.+|.+..+|..++.++. ..|++++|+++|+++++..|++..++..++.++.. .|++++|+.+|
T Consensus 387 g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~ 464 (597)
T 2xpi_A 387 NKISEARRYFSKSSTMDPQFGPAWIGFAHSFA-IEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQ-LGNILLANEYL 464 (597)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHH-HTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 45555555555555555555555555555544 35555555555555555555555555555554433 34555555555
Q ss_pred HHHHHhCCC
Q 027404 214 DRAVHSAPD 222 (224)
Q Consensus 214 erAL~l~P~ 222 (224)
+++++++|+
T Consensus 465 ~~~~~~~~~ 473 (597)
T 2xpi_A 465 QSSYALFQY 473 (597)
T ss_dssp HHHHHHCCC
T ss_pred HHHHHhCCC
Confidence 555555554
No 122
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=99.00 E-value=1.1e-09 Score=98.16 Aligned_cols=88 Identities=16% Similarity=0.200 Sum_probs=79.8
Q ss_pred CCHHHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHH-----cCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHHcCC
Q 027404 134 KESESMDVYYQEMIKAYPE--DALVLANYAKFLKEI-----RGDFVKAEEYCGRAILAKPGD-GNVLSMYGDLIWINHKD 205 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~--na~~l~nlA~~l~e~-----~Gd~eeAe~~~erAL~ldP~d-a~al~~lG~ll~~~~gd 205 (224)
.....|...++|||++||+ +..+|..+|.++. . -|+.++|+++|+|||+++|+. ..++..||..++...++
T Consensus 177 ~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~-~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd 255 (301)
T 3u64_A 177 DTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYA-AAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNN 255 (301)
T ss_dssp HHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHH-HSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTC
T ss_pred HhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHH-hCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCC
Confidence 4778999999999999999 6779999998876 4 399999999999999999975 99999999988775689
Q ss_pred hHHHHHHHHHHHHhCCC
Q 027404 206 APRAKSYFDRAVHSAPD 222 (224)
Q Consensus 206 ~eeA~~~ferAL~l~P~ 222 (224)
+++|..++++|++++|.
T Consensus 256 ~~~a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 256 RAGFDEALDRALAIDPE 272 (301)
T ss_dssp HHHHHHHHHHHHHCCGG
T ss_pred HHHHHHHHHHHHcCCCC
Confidence 99999999999999886
No 123
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.00 E-value=1.3e-09 Score=93.62 Aligned_cols=82 Identities=16% Similarity=0.116 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHHcCChHHHHHHH
Q 027404 136 SESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGD--GNVLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 136 ~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~d--a~al~~lG~ll~~~~gd~eeA~~~f 213 (224)
.++|+..|++|++.+|+++.+++++|.++. ..|++++|+.+|+++++.+|++ +.++.+++.++.. .|+.++|+..|
T Consensus 201 ~~~a~~~l~~al~~~P~~~~~~~~la~~l~-~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~-~g~~~~a~~~~ 278 (287)
T 3qou_A 201 DTPEIQQLQQQVAENPEDAALATQLALQLH-QVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAA-LGTGDALASXY 278 (287)
T ss_dssp SCHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHH-HCTTCHHHHHH
T ss_pred cCccHHHHHHHHhcCCccHHHHHHHHHHHH-HcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHH-cCCCCcHHHHH
Confidence 345778889999999999999999999987 6999999999999999999999 8899999988755 57899999999
Q ss_pred HHHHHh
Q 027404 214 DRAVHS 219 (224)
Q Consensus 214 erAL~l 219 (224)
++++..
T Consensus 279 r~al~~ 284 (287)
T 3qou_A 279 RRQLYA 284 (287)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999863
No 124
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=98.99 E-value=1.1e-09 Score=97.16 Aligned_cols=88 Identities=15% Similarity=0.106 Sum_probs=79.3
Q ss_pred CCHHHHHHHHHHHHHHCCCCHH------HHHHHHHHHHHH---cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC
Q 027404 134 KESESMDVYYQEMIKAYPEDAL------VLANYAKFLKEI---RGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHK 204 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~------~l~nlA~~l~e~---~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~g 204 (224)
+++++|+.+|+++++.+|.++. ++.++|.++. . .|++++|+.+|++++.++|+++.++..+|.++.. .|
T Consensus 386 ~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~-~g 463 (514)
T 2gw1_A 386 NDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLT-RNPTVENFIEATNLLEKASKLDPRSEQAKIGLAQMKLQ-QE 463 (514)
T ss_dssp TCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHH-TSCCTTHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TT
T ss_pred CCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHh-hhhhcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH-hc
Confidence 6889999999999999888855 8899998876 6 8999999999999999999999999999988765 58
Q ss_pred ChHHHHHHHHHHHHhCCCC
Q 027404 205 DAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 205 d~eeA~~~ferAL~l~P~d 223 (224)
++++|+.+|+++++++|++
T Consensus 464 ~~~~A~~~~~~a~~~~~~~ 482 (514)
T 2gw1_A 464 DIDEAITLFEESADLARTM 482 (514)
T ss_dssp CHHHHHHHHHHHHHHCSSH
T ss_pred CHHHHHHHHHHHHHhcccc
Confidence 9999999999999999974
No 125
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.98 E-value=3.5e-09 Score=79.97 Aligned_cols=66 Identities=11% Similarity=-0.041 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC
Q 027404 156 VLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 156 ~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~ferAL~l~P~d 223 (224)
.++.+|..+. ..|++++|+.+|++|++++|+++.+|..+|.++.. .|++++|+.+|++|++++|++
T Consensus 19 ~~~~~g~~~~-~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~-~g~~~~A~~~~~~al~l~P~~ 84 (121)
T 1hxi_A 19 NPMEEGLSML-KLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAE-NEKDGLAIIALNHARMLDPKD 84 (121)
T ss_dssp CHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTC
T ss_pred hHHHHHHHHH-HcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCC
Confidence 4677888887 69999999999999999999999999999998865 689999999999999999986
No 126
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.97 E-value=2.6e-10 Score=105.97 Aligned_cols=88 Identities=15% Similarity=-0.038 Sum_probs=75.4
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH--HHHHcCChHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDL--IWINHKDAPRAKS 211 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~l--l~~~~gd~eeA~~ 211 (224)
+++++|+.+|++|++++|+++.+++++|.++. .+|++++|+++|++|++++|++..++..++.+ +.. .+++++|++
T Consensus 54 g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~-~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~-~g~~~~A~~ 131 (477)
T 1wao_1 54 ECYGYALGDATRAIELDKKYIKGYYRRAASNM-ALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVK-QKAFERAIA 131 (477)
T ss_dssp TCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHH-HHHHCCC--
T ss_pred cCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH-HHHHHHHhc
Confidence 68999999999999999999999999999987 69999999999999999999999999999877 544 468999999
Q ss_pred HHH-----------HHHHhCCCC
Q 027404 212 YFD-----------RAVHSAPDD 223 (224)
Q Consensus 212 ~fe-----------rAL~l~P~d 223 (224)
+++ ++++++|++
T Consensus 132 ~~~~~~~~~~~~~~~al~~~~~~ 154 (477)
T 1wao_1 132 GDEHKRSVVDSLDIESMTIEDEY 154 (477)
T ss_dssp ----CCSTTTCCTTSSCCCCTTC
T ss_pred cccccchhHhhhhhhhccccccc
Confidence 999 888887764
No 127
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.97 E-value=9.6e-10 Score=89.27 Aligned_cols=85 Identities=15% Similarity=0.180 Sum_probs=77.1
Q ss_pred CCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKA--------YPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILA--------KPGDGNVLSMYGD 197 (224)
Q Consensus 134 ~d~e~A~~~yerALe~--------dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~l--------dP~da~al~~lG~ 197 (224)
+++++|+.+|++|++. +|....++.++|.++. ..|++++|+.+|++++++ +|....++..+|.
T Consensus 99 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~ 177 (283)
T 3edt_B 99 GKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQ-NQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLAS 177 (283)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 7899999999999998 5777899999999987 699999999999999999 7778889999999
Q ss_pred HHHHHcCChHHHHHHHHHHHHhC
Q 027404 198 LIWINHKDAPRAKSYFDRAVHSA 220 (224)
Q Consensus 198 ll~~~~gd~eeA~~~ferAL~l~ 220 (224)
++.. .|++++|+.+|++++++.
T Consensus 178 ~~~~-~g~~~~A~~~~~~~l~~~ 199 (283)
T 3edt_B 178 CYLK-QGKYQDAETLYKEILTRA 199 (283)
T ss_dssp HHHH-HTCHHHHHHHHHHHHHHH
T ss_pred HHHH-cCCHHHHHHHHHHHHHHH
Confidence 8876 578999999999999873
No 128
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.96 E-value=1.5e-09 Score=89.77 Aligned_cols=87 Identities=22% Similarity=0.255 Sum_probs=77.6
Q ss_pred CCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---------------------
Q 027404 134 KESESMDVYYQEMIKA--------YPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILA--------------------- 184 (224)
Q Consensus 134 ~d~e~A~~~yerALe~--------dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~l--------------------- 184 (224)
+++++|+.+|+++++. +|..+.++.++|.++. ..|++++|+.+|++++++
T Consensus 167 ~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~ 245 (311)
T 3nf1_A 167 GKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYL-KQGKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHAE 245 (311)
T ss_dssp TCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHHHHC------CCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHH
Confidence 7899999999999999 7878889999999987 699999999999999984
Q ss_pred ----------------------------CCCCHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC
Q 027404 185 ----------------------------KPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPD 222 (224)
Q Consensus 185 ----------------------------dP~da~al~~lG~ll~~~~gd~eeA~~~ferAL~l~P~ 222 (224)
+|.++.++..+|.++.. .|++++|+.+|++|+++.|.
T Consensus 246 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~l~~~ 310 (311)
T 3nf1_A 246 EREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRR-QGKFEAAETLEEAAMRSRKQ 310 (311)
T ss_dssp HHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHC-
T ss_pred HHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHhhc
Confidence 46677889999988876 57899999999999999886
No 129
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.94 E-value=3.5e-09 Score=94.10 Aligned_cols=88 Identities=14% Similarity=0.049 Sum_probs=77.9
Q ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH---HHHHHHHHHHHHcCChHHHHH
Q 027404 135 ESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGN---VLSMYGDLIWINHKDAPRAKS 211 (224)
Q Consensus 135 d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~---al~~lG~ll~~~~gd~eeA~~ 211 (224)
.+++|..+|++|++.+|.++.++.++|.++. ..|++++|+.+|++||.++|++.. ++..+|.++....+++++|+.
T Consensus 315 ~~~~A~~~~~~a~~~~~~~~~~~~~lg~~~~-~~~~~~~A~~~~~kaL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ai~ 393 (472)
T 4g1t_A 315 LIGHAVAHLKKADEANDNLFRVCSILASLHA-LADQYEEAEYYFQKEFSKELTPVAKQLLHLRYGNFQLYQMKCEDKAIH 393 (472)
T ss_dssp HHHHHHHHHHHHHHHCTTTCCCHHHHHHHHH-HTTCHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTSSCHHHHHH
T ss_pred hHHHHHHHHHHHhhcCCchhhhhhhHHHHHH-HhccHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHCCCHHHHHH
Confidence 4678999999999999999999999999887 699999999999999999998765 356677766656789999999
Q ss_pred HHHHHHHhCCCC
Q 027404 212 YFDRAVHSAPDD 223 (224)
Q Consensus 212 ~ferAL~l~P~d 223 (224)
+|++|++++|++
T Consensus 394 ~y~kal~i~~~~ 405 (472)
T 4g1t_A 394 HFIEGVKINQKS 405 (472)
T ss_dssp HHHHHHHSCCCC
T ss_pred HHHHHHhcCccc
Confidence 999999998864
No 130
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.92 E-value=2.2e-09 Score=87.15 Aligned_cols=84 Identities=23% Similarity=0.304 Sum_probs=75.3
Q ss_pred CCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKA--------YPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILA--------KPGDGNVLSMYGD 197 (224)
Q Consensus 134 ~d~e~A~~~yerALe~--------dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~l--------dP~da~al~~lG~ 197 (224)
+++++|+.+|++|++. +|..+.++.++|.++. .+|++++|+.+|++|+.+ +|....++.++|.
T Consensus 57 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~ 135 (283)
T 3edt_B 57 NKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYG-KRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLAL 135 (283)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Confidence 6899999999999988 4666789999999987 699999999999999998 5777888999998
Q ss_pred HHHHHcCChHHHHHHHHHHHHh
Q 027404 198 LIWINHKDAPRAKSYFDRAVHS 219 (224)
Q Consensus 198 ll~~~~gd~eeA~~~ferAL~l 219 (224)
++.. .+++++|+.+|++++++
T Consensus 136 ~~~~-~g~~~~A~~~~~~al~~ 156 (283)
T 3edt_B 136 LCQN-QGKAEEVEYYYRRALEI 156 (283)
T ss_dssp HHHT-TTCHHHHHHHHHHHHHH
T ss_pred HHHH-cCCHHHHHHHHHHHHHH
Confidence 8765 58999999999999988
No 131
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.92 E-value=8.2e-09 Score=73.32 Aligned_cols=64 Identities=19% Similarity=0.199 Sum_probs=58.1
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC
Q 027404 158 ANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGN-VLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 158 ~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~-al~~lG~ll~~~~gd~eeA~~~ferAL~l~P~d 223 (224)
++.|..+. ..|++++|+++|+++++.+|+++. ++..+|.++.. .+++++|+.+|+++++++|++
T Consensus 4 ~~~a~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~p~~ 68 (99)
T 2kc7_A 4 LKTIKELI-NQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRK-LGDWQKALNNYQSAIELNPDS 68 (99)
T ss_dssp HHHHHHHH-HHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHH-HcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhcCCCc
Confidence 56677776 689999999999999999999999 99999998876 578999999999999999986
No 132
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.92 E-value=7.6e-09 Score=75.33 Aligned_cols=69 Identities=16% Similarity=0.019 Sum_probs=64.1
Q ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 027404 133 GKESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWIN 202 (224)
Q Consensus 133 ~~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~ 202 (224)
.+++++|+.+|+++++.+|.++.+++++|.++. ..|++++|+++|++++.++|++..++..++.++...
T Consensus 63 ~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~ 131 (133)
T 2lni_A 63 LLEFQLALKDCEECIQLEPTFIKGYTRKAAALE-AMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQ 131 (133)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHhCCCchHHHHHHHHHHH-HHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHh
Confidence 378999999999999999999999999999987 699999999999999999999999999999887653
No 133
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.91 E-value=4.8e-09 Score=84.02 Aligned_cols=83 Identities=14% Similarity=0.045 Sum_probs=67.0
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHH-HH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAK-SY 212 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~-~~ 212 (224)
+++++|+.+|++|++++|+++.+++++|.++. ..|++++|+.+|++|++++|++..++..++.++... ++.+++. ..
T Consensus 102 ~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~-~~~~~~~~~~ 179 (198)
T 2fbn_A 102 KDYPKAIDHASKVLKIDKNNVKALYKLGVANM-YFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKL-KEARKKDKLT 179 (198)
T ss_dssp TCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH-HHHHC-----
T ss_pred cCHHHHHHHHHHHHHhCcccHHHHHHHHHHHH-HcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 68999999999999999999999999999987 699999999999999999999999999999887654 4566666 44
Q ss_pred HHHHHH
Q 027404 213 FDRAVH 218 (224)
Q Consensus 213 ferAL~ 218 (224)
|.+.+.
T Consensus 180 ~~~~f~ 185 (198)
T 2fbn_A 180 FGGMFD 185 (198)
T ss_dssp ------
T ss_pred HHHHhc
Confidence 444443
No 134
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.91 E-value=5.7e-09 Score=85.68 Aligned_cols=87 Identities=13% Similarity=0.048 Sum_probs=69.6
Q ss_pred CCCHHHHHHHHHHHHHHCC--CCHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC--
Q 027404 133 GKESESMDVYYQEMIKAYP--EDALVLANYAKFLKEI----RGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHK-- 204 (224)
Q Consensus 133 ~~d~e~A~~~yerALe~dP--~na~~l~nlA~~l~e~----~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~g-- 204 (224)
.+++++|+.+|++|++.+| +++.+++++|.++. . .+++++|+.+|++|+++ |.++.++.++|.++....+
T Consensus 102 ~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~-~g~g~~~d~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~~g~gg~ 179 (212)
T 3rjv_A 102 ATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYA-SGVHGPEDDVKASEYFKGSSSL-SRTGYAEYWAGMMFQQGEKGF 179 (212)
T ss_dssp SCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHH-HTSSSSCCHHHHHHHHHHHHHT-SCTTHHHHHHHHHHHHCBTTT
T ss_pred ccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHcCCCCC
Confidence 3688899999999988888 45888889988776 5 66888999999999888 6777888888887765333
Q ss_pred ---ChHHHHHHHHHHHHhCC
Q 027404 205 ---DAPRAKSYFDRAVHSAP 221 (224)
Q Consensus 205 ---d~eeA~~~ferAL~l~P 221 (224)
++++|+.+|++|++...
T Consensus 180 ~~~d~~~A~~~~~~A~~~g~ 199 (212)
T 3rjv_A 180 IEPNKQKALHWLNVSCLEGF 199 (212)
T ss_dssp BCCCHHHHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHHHHcCC
Confidence 78899999998887643
No 135
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=98.90 E-value=7.7e-09 Score=84.94 Aligned_cols=89 Identities=10% Similarity=0.199 Sum_probs=78.4
Q ss_pred CCCHHHHHHHHHHHHHHCCCCHHHH-----------------HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---HHH
Q 027404 133 GKESESMDVYYQEMIKAYPEDALVL-----------------ANYAKFLKEIRGDFVKAEEYCGRAILAKPGDG---NVL 192 (224)
Q Consensus 133 ~~d~e~A~~~yerALe~dP~na~~l-----------------~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da---~al 192 (224)
.+++++|+.+|+++|+.+|+++.++ ..+|.++. .+|++++|+.+|+++|+..|+++ .++
T Consensus 109 ~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~l~~~p~~~~~~~a~ 187 (225)
T 2yhc_A 109 PQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYT-ERGAWVAVVNRVEGMLRDYPDTQATRDAL 187 (225)
T ss_dssp CHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHSTTSHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCcHHHHHHHHHHHHHHCcCCCccHHHH
Confidence 4689999999999999999998654 56787777 69999999999999999999986 678
Q ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHhCCCC
Q 027404 193 SMYGDLIWINHKDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 193 ~~lG~ll~~~~gd~eeA~~~ferAL~l~P~d 223 (224)
..+|.++.. .|++++|+.+|++++...|++
T Consensus 188 ~~l~~~~~~-~g~~~~A~~~~~~l~~~~~~~ 217 (225)
T 2yhc_A 188 PLMENAYRQ-MQMNAQAEKVAKIIAANSSNT 217 (225)
T ss_dssp HHHHHHHHH-TTCHHHHHHHHHHHHHCCSCC
T ss_pred HHHHHHHHH-cCCcHHHHHHHHHHHhhCCCc
Confidence 899988766 589999999999999998875
No 136
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.90 E-value=1.8e-08 Score=72.53 Aligned_cols=68 Identities=13% Similarity=-0.008 Sum_probs=63.9
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWIN 202 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~ 202 (224)
+++++|+.+|+++++.+|+++.+++.+|.++. ..|++++|+.+|++++.++|++..++..++.++...
T Consensus 60 ~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~ 127 (131)
T 2vyi_A 60 GNYAGAVQDCERAICIDPAYSKAYGRMGLALS-SLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKL 127 (131)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH
T ss_pred hchHHHHHHHHHHHhcCccCHHHHHHHHHHHH-HhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHHH
Confidence 68999999999999999999999999999987 699999999999999999999999999999887654
No 137
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.88 E-value=5.1e-09 Score=90.28 Aligned_cols=87 Identities=11% Similarity=0.018 Sum_probs=72.2
Q ss_pred CCHHHHHHHHHHHHHHCCCC------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPED------ALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGD------GNVLSMYGDLIWI 201 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~n------a~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~d------a~al~~lG~ll~~ 201 (224)
+++++|+.+|++|+++.|.. +.++.++|.++. .+|++++|+.+|++|+.+.|.+ ..++..++.++..
T Consensus 129 g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~ 207 (307)
T 2ifu_A 129 LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLV-RQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLH 207 (307)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHH
Confidence 78999999999999988764 578899999887 6999999999999999987654 2356666766544
Q ss_pred HcCChHHHHHHHHHHHHhCCCC
Q 027404 202 NHKDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 202 ~~gd~eeA~~~ferAL~l~P~d 223 (224)
.+++++|+.+|++++ ++|+.
T Consensus 208 -~g~~~~A~~~~~~al-~~p~~ 227 (307)
T 2ifu_A 208 -RADYVAAQKCVRESY-SIPGF 227 (307)
T ss_dssp -TTCHHHHHHHHHHHT-TSTTS
T ss_pred -cCCHHHHHHHHHHHh-CCCCC
Confidence 578999999999999 99864
No 138
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.88 E-value=2.5e-08 Score=82.88 Aligned_cols=82 Identities=15% Similarity=0.115 Sum_probs=41.8
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH---cCCh
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEI----RGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWIN---HKDA 206 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~----~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~---~gd~ 206 (224)
+++++|+.+|++|++.+ ++.+++++|.++. . .+++++|+.+|++|++. +++.++.++|.++... .+++
T Consensus 56 ~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~-~g~~~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~~~ 130 (273)
T 1ouv_A 56 KNLKKAASFYAKACDLN--YSNGCHLLGNLYY-SGQGVSQNTNKALQYYSKACDL--KYAEGCASLGGIYHDGKVVTRDF 130 (273)
T ss_dssp CCHHHHHHHHHHHHHTT--CHHHHHHHHHHHH-HTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCH
T ss_pred CCHHHHHHHHHHHHHCC--CHHHHHHHHHHHh-CCCCcccCHHHHHHHHHHHHHc--CCccHHHHHHHHHHcCCCcccCH
Confidence 45555555555555543 4555555555443 4 45555555555555554 2455555555444320 3455
Q ss_pred HHHHHHHHHHHHhC
Q 027404 207 PRAKSYFDRAVHSA 220 (224)
Q Consensus 207 eeA~~~ferAL~l~ 220 (224)
++|+.+|++|++++
T Consensus 131 ~~A~~~~~~a~~~~ 144 (273)
T 1ouv_A 131 KKAVEYFTKACDLN 144 (273)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcC
Confidence 55555555555543
No 139
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.87 E-value=1.1e-08 Score=83.35 Aligned_cols=88 Identities=13% Similarity=0.054 Sum_probs=79.2
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhC-C-CCHHHHHHHHHHHHHHcCChHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRG---DFVKAEEYCGRAILAK-P-GDGNVLSMYGDLIWINHKDAPR 208 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~G---d~eeAe~~~erAL~ld-P-~da~al~~lG~ll~~~~gd~ee 208 (224)
.....+++.|+++++.+|.+.++.++||+++. ... ++++|+.+|+.+++.+ | ++.+.++++|..++. .++|++
T Consensus 12 ~~l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv-~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~k-l~~Y~~ 89 (152)
T 1pc2_A 12 EDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLV-RSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYR-LKEYEK 89 (152)
T ss_dssp HHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHH-TCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH-TSCHHH
T ss_pred HHHHHHHHHHHHHHccCCCcHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHH-ccCHHH
Confidence 46778999999999999999999999999997 466 6779999999999999 7 678899999988865 689999
Q ss_pred HHHHHHHHHHhCCCC
Q 027404 209 AKSYFDRAVHSAPDD 223 (224)
Q Consensus 209 A~~~ferAL~l~P~d 223 (224)
|..+++++++++|++
T Consensus 90 A~~y~~~lL~ieP~n 104 (152)
T 1pc2_A 90 ALKYVRGLLQTEPQN 104 (152)
T ss_dssp HHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHhcCCCC
Confidence 999999999999986
No 140
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=98.86 E-value=2.7e-09 Score=82.84 Aligned_cols=65 Identities=15% Similarity=0.016 Sum_probs=59.3
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-HHHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDG-NVLSMYGDLI 199 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da-~al~~lG~ll 199 (224)
+++++|+.+|++||+++|+++.+++.+|.++. ..|++++|+.+|++|+.++|+++ .+...++.+.
T Consensus 77 ~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~-~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~ 142 (162)
T 3rkv_A 77 GDLHEAEETSSEVLKREETNEKALFRRAKARI-AAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVT 142 (162)
T ss_dssp TCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHhcCCcchHHHHHHHHHHH-HHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 68999999999999999999999999999987 69999999999999999999999 5666666554
No 141
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.86 E-value=3e-08 Score=70.72 Aligned_cols=67 Identities=21% Similarity=0.298 Sum_probs=62.8
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWI 201 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~ 201 (224)
+++++|+.+|+++++.+|.++.++.++|.++. ..|++++|+.+|++++.++|+++.++..++.++..
T Consensus 57 ~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 123 (125)
T 1na0_A 57 GDYDEAIEYYQKALELDPNNAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQK 123 (125)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHh
Confidence 68999999999999999999999999999987 69999999999999999999999999999887654
No 142
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.86 E-value=9e-09 Score=84.89 Aligned_cols=87 Identities=13% Similarity=0.187 Sum_probs=76.4
Q ss_pred CCCHHHHHHHHHHHHHHCCCCH----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHH
Q 027404 133 GKESESMDVYYQEMIKAYPEDA----LVLANYAKFLKEIRGDFVKAEEYCGRAILA------KPGDGNVLSMYGDLIWIN 202 (224)
Q Consensus 133 ~~d~e~A~~~yerALe~dP~na----~~l~nlA~~l~e~~Gd~eeAe~~~erAL~l------dP~da~al~~lG~ll~~~ 202 (224)
.+++++|+.+|++|++.+|+++ .++..+|.++. ..|++++|+.+|++|+.+ .|..+.++..+|.++..
T Consensus 18 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~- 95 (338)
T 3ro2_A 18 SGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYF-YLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKV- 95 (338)
T ss_dssp TTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-
T ss_pred hccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHH-
Confidence 3789999999999999999994 68889999887 699999999999999987 55567788899988765
Q ss_pred cCChHHHHHHHHHHHHhCC
Q 027404 203 HKDAPRAKSYFDRAVHSAP 221 (224)
Q Consensus 203 ~gd~eeA~~~ferAL~l~P 221 (224)
.+++++|+.+|++++++.|
T Consensus 96 ~g~~~~A~~~~~~al~~~~ 114 (338)
T 3ro2_A 96 LGNFDEAIVCCQRHLDISR 114 (338)
T ss_dssp TTCHHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHH
Confidence 5899999999999998754
No 143
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.86 E-value=6.8e-09 Score=85.03 Aligned_cols=60 Identities=12% Similarity=0.117 Sum_probs=53.7
Q ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 027404 135 ESESMDVYYQEMIKAYPEDALVLANYAKFLKEIR-----------GDFVKAEEYCGRAILAKPGDGNVLSMY 195 (224)
Q Consensus 135 d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~-----------Gd~eeAe~~~erAL~ldP~da~al~~l 195 (224)
.+++|+..|++||+++|+++.+|+++|.++. .+ |++++|+++|++||+++|++...+..+
T Consensus 61 ~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~-~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al 131 (158)
T 1zu2_A 61 MIQEAITKFEEALLIDPKKDEAVWCIGNAYT-SFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSL 131 (158)
T ss_dssp HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcCcHHHHHHHHHHHH-HhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 4789999999999999999999999999987 45 489999999999999999997665543
No 144
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.85 E-value=1.4e-08 Score=75.16 Aligned_cols=61 Identities=18% Similarity=0.214 Sum_probs=56.8
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMY 195 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~l 195 (224)
+++++|+.+|++|++.+|+++.+++++|.++. ..|++++|+.+|+++++.+|+++.+....
T Consensus 41 ~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~~ 101 (117)
T 3k9i_A 41 GEYRKAEAVLANGVKQFPNHQALRVFYAMVLY-NLGRYEQGVELLLKIIAETSDDETIQSYK 101 (117)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHCCCHHHHHTH
T ss_pred CCHHHHHHHHHHHHHhCCCchHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 78999999999999999999999999999987 69999999999999999999998876543
No 145
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.85 E-value=4.1e-09 Score=89.79 Aligned_cols=85 Identities=14% Similarity=0.083 Sum_probs=71.6
Q ss_pred CCHHHHHHHHHHHHHH---C----CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKA---Y----PEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGD------GNVLSMYGDLIW 200 (224)
Q Consensus 134 ~d~e~A~~~yerALe~---d----P~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~d------a~al~~lG~ll~ 200 (224)
+++++|+.+|++|++. . +..+.+++++|.++. .+|++++|+.+|++|+++.+.. +.++.++|.++.
T Consensus 169 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~-~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~ 247 (293)
T 3u3w_A 169 GYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALY-LDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLR 247 (293)
T ss_dssp TCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHH
Confidence 6899999999999953 2 222468899999987 6999999999999999987654 788999999887
Q ss_pred HHcCChHHHHHHHHHHHHh
Q 027404 201 INHKDAPRAKSYFDRAVHS 219 (224)
Q Consensus 201 ~~~gd~eeA~~~ferAL~l 219 (224)
.++.++++|+.+|++|+.+
T Consensus 248 ~~g~~~~~A~~~~~~Al~i 266 (293)
T 3u3w_A 248 KLEYEEAEIEDAYKKASFF 266 (293)
T ss_dssp HTTCCHHHHHHHHHHHHHH
T ss_pred HhCCcHHHHHHHHHHHHHH
Confidence 7543579999999999976
No 146
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.85 E-value=1.3e-08 Score=88.57 Aligned_cols=84 Identities=17% Similarity=0.231 Sum_probs=76.7
Q ss_pred CCHHHHHHHHHHHHHHCCCCH----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHHc
Q 027404 134 KESESMDVYYQEMIKAYPEDA----LVLANYAKFLKEIRGDFVKAEEYCGRAILA------KPGDGNVLSMYGDLIWINH 203 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na----~~l~nlA~~l~e~~Gd~eeAe~~~erAL~l------dP~da~al~~lG~ll~~~~ 203 (224)
+++++|+.+|++|++++|+++ .+++++|.++. ..|++++|+.+|++|+++ +|..+.++..+|.++.. .
T Consensus 62 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~-~ 139 (411)
T 4a1s_A 62 GDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYF-YLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLKV-M 139 (411)
T ss_dssp TCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-T
T ss_pred CcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHHH-C
Confidence 799999999999999999997 58899999887 699999999999999998 67788899999988765 5
Q ss_pred CChHHHHHHHHHHHHh
Q 027404 204 KDAPRAKSYFDRAVHS 219 (224)
Q Consensus 204 gd~eeA~~~ferAL~l 219 (224)
|++++|+.+|++++++
T Consensus 140 g~~~~A~~~~~~al~~ 155 (411)
T 4a1s_A 140 GRFDEAAICCERHLTL 155 (411)
T ss_dssp TCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 8999999999999987
No 147
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.84 E-value=4e-08 Score=81.65 Aligned_cols=82 Identities=24% Similarity=0.260 Sum_probs=46.9
Q ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH---HcCC
Q 027404 133 GKESESMDVYYQEMIKAYPEDALVLANYAKFLKEI----RGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWI---NHKD 205 (224)
Q Consensus 133 ~~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~----~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~---~~gd 205 (224)
.+++++|+.+|++|++.+ ++.+++++|.++. . .+++++|+.+|++|++.+ ++.++.++|.++.. ..++
T Consensus 91 ~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~-~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~ 165 (273)
T 1ouv_A 91 SQNTNKALQYYSKACDLK--YAEGCASLGGIYH-DGKVVTRDFKKAVEYFTKACDLN--DGDGCTILGSLYDAGRGTPKD 165 (273)
T ss_dssp CCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCC
T ss_pred ccCHHHHHHHHHHHHHcC--CccHHHHHHHHHH-cCCCcccCHHHHHHHHHHHHhcC--cHHHHHHHHHHHHcCCCCCCC
Confidence 355666666666666552 5666666665554 4 566666666666666554 45555556655433 0345
Q ss_pred hHHHHHHHHHHHHh
Q 027404 206 APRAKSYFDRAVHS 219 (224)
Q Consensus 206 ~eeA~~~ferAL~l 219 (224)
+++|+.+|++|+++
T Consensus 166 ~~~A~~~~~~a~~~ 179 (273)
T 1ouv_A 166 LKKALASYDKACDL 179 (273)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHC
Confidence 66666666666554
No 148
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.84 E-value=8.4e-09 Score=76.40 Aligned_cols=85 Identities=15% Similarity=0.152 Sum_probs=67.1
Q ss_pred CCHHHHHHHHHHHHHHCCCCH------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDA------LVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGD------GNVLSMYGDLIWI 201 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na------~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~d------a~al~~lG~ll~~ 201 (224)
+++++|+.+|++|++..+... .++.++|.++. ..|++++|+.+|++|+++.+.. +.++.++|.++..
T Consensus 23 ~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~ 101 (164)
T 3ro3_A 23 GNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYI-FLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTL 101 (164)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence 688999999999998765432 47888888887 6899999999999999876543 5567788877765
Q ss_pred HcCChHHHHHHHHHHHHhC
Q 027404 202 NHKDAPRAKSYFDRAVHSA 220 (224)
Q Consensus 202 ~~gd~eeA~~~ferAL~l~ 220 (224)
.+++++|+.+|++++++.
T Consensus 102 -~~~~~~A~~~~~~a~~~~ 119 (164)
T 3ro3_A 102 -LQDYEKAIDYHLKHLAIA 119 (164)
T ss_dssp -TTCHHHHHHHHHHHHHHH
T ss_pred -HhhHHHHHHHHHHHHHHH
Confidence 578999999999988763
No 149
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.84 E-value=3.6e-08 Score=83.89 Aligned_cols=86 Identities=8% Similarity=0.051 Sum_probs=73.9
Q ss_pred CCHHHHHHHHHHHHHHCCCC------HHHHHHHHHHHHHHcCCHHHHHHHHHHHH---HhCCCCH----HHHHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPED------ALVLANYAKFLKEIRGDFVKAEEYCGRAI---LAKPGDG----NVLSMYGDLIW 200 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~n------a~~l~nlA~~l~e~~Gd~eeAe~~~erAL---~ldP~da----~al~~lG~ll~ 200 (224)
+++++|+.+|++|++..+.. +.+++++|.++. .+|++++|+.+|++|+ +..|++. .++.++|.++.
T Consensus 129 ~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~-~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~ 207 (293)
T 2qfc_A 129 VDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYA-ENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALY 207 (293)
T ss_dssp SCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHH
Confidence 68999999999999876554 578999999987 6999999999999999 5667653 58889999887
Q ss_pred HHcCChHHHHHHHHHHHHhCC
Q 027404 201 INHKDAPRAKSYFDRAVHSAP 221 (224)
Q Consensus 201 ~~~gd~eeA~~~ferAL~l~P 221 (224)
. .+++++|+.+|++|+++.+
T Consensus 208 ~-~~~y~~Al~~~~kal~~~~ 227 (293)
T 2qfc_A 208 L-DSRYEESLYQVNKAIEISC 227 (293)
T ss_dssp H-TTCHHHHHHHHHHHHHHHH
T ss_pred H-HhhHHHHHHHHHHHHHHHH
Confidence 6 5899999999999998753
No 150
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.82 E-value=2.1e-08 Score=74.51 Aligned_cols=75 Identities=13% Similarity=-0.001 Sum_probs=67.9
Q ss_pred HHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC
Q 027404 147 IKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGD---GNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 147 Le~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~d---a~al~~lG~ll~~~~gd~eeA~~~ferAL~l~P~d 223 (224)
+..+|.++..++.+|..+. ..|++++|+.+|+++++.+|++ ..++..+|.++.. .+++++|+.+|+++++++|++
T Consensus 21 ~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~~~~~ 98 (148)
T 2dba_A 21 ATPGASSVEQLRKEGNELF-KCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLK-LEDYDKAETEASKAIEKDGGD 98 (148)
T ss_dssp CCTTCCCHHHHHHHHHHHH-TTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHTSCC
T ss_pred CccchHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHH-HccHHHHHHHHHHHHhhCccC
Confidence 4567889999999999887 6999999999999999999998 8899999988766 579999999999999999975
No 151
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.82 E-value=1.7e-08 Score=92.91 Aligned_cols=86 Identities=16% Similarity=0.185 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH------cCCHH-------HHHHHHHHHHH-hCCCCHHHHHHHHHHHHHH
Q 027404 137 ESMDVYYQEMIKAYPEDALVLANYAKFLKEI------RGDFV-------KAEEYCGRAIL-AKPGDGNVLSMYGDLIWIN 202 (224)
Q Consensus 137 e~A~~~yerALe~dP~na~~l~nlA~~l~e~------~Gd~e-------eAe~~~erAL~-ldP~da~al~~lG~ll~~~ 202 (224)
++|...|++||..+|+++.+|++||.++... .|+++ +|+.+|++|++ ++|++..+|..++.++..
T Consensus 255 ~~a~~~y~~al~~~p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~- 333 (530)
T 2ooe_A 255 KRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEES- 333 (530)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHh-
Confidence 4778889999999999999999998877521 58876 88999999997 788888888888877654
Q ss_pred cCChHHHHHHHHHHHHhCCCC
Q 027404 203 HKDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 203 ~gd~eeA~~~ferAL~l~P~d 223 (224)
.|++++|...|++|++++|++
T Consensus 334 ~g~~~~A~~~~~~al~~~p~~ 354 (530)
T 2ooe_A 334 RMKYEKVHSIYNRLLAIEDID 354 (530)
T ss_dssp TTCHHHHHHHHHHHHHSSSSC
T ss_pred cCCHHHHHHHHHHHhCccccC
Confidence 578899999999999888864
No 152
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.82 E-value=1.4e-08 Score=87.19 Aligned_cols=86 Identities=13% Similarity=0.188 Sum_probs=76.1
Q ss_pred CCHHHHHHHHHHHHHHCCCCH----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHHc
Q 027404 134 KESESMDVYYQEMIKAYPEDA----LVLANYAKFLKEIRGDFVKAEEYCGRAILA------KPGDGNVLSMYGDLIWINH 203 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na----~~l~nlA~~l~e~~Gd~eeAe~~~erAL~l------dP~da~al~~lG~ll~~~~ 203 (224)
+++++|+.+|++|++.+|.++ .++..+|.++. ..|++++|+.+|++|+.+ .|..+.++..+|.+++. .
T Consensus 23 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~-~ 100 (406)
T 3sf4_A 23 GDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYF-YLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKV-L 100 (406)
T ss_dssp TCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-T
T ss_pred ccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHH-c
Confidence 789999999999999999995 68889999887 699999999999999987 45557788899988765 5
Q ss_pred CChHHHHHHHHHHHHhCC
Q 027404 204 KDAPRAKSYFDRAVHSAP 221 (224)
Q Consensus 204 gd~eeA~~~ferAL~l~P 221 (224)
|++++|+.+|++|+++.|
T Consensus 101 g~~~~A~~~~~~al~~~~ 118 (406)
T 3sf4_A 101 GNFDEAIVCCQRHLDISR 118 (406)
T ss_dssp TCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 899999999999998765
No 153
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.81 E-value=3.4e-08 Score=69.91 Aligned_cols=64 Identities=8% Similarity=0.016 Sum_probs=60.5
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDL 198 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~l 198 (224)
+++++|+.+|+++++.+|.++.++.++|.++. ..|++++|+.+|+++++.+|+++.++..++.+
T Consensus 52 ~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 115 (118)
T 1elw_A 52 GDYQKAYEDGCKTVDLKPDWGKGYSRKAAALE-FLNRFEEAKRTYEEGLKHEANNPQLKEGLQNM 115 (118)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCcccHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHh
Confidence 68999999999999999999999999999987 69999999999999999999999999888765
No 154
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.81 E-value=2e-08 Score=74.30 Aligned_cols=86 Identities=14% Similarity=0.162 Sum_probs=72.2
Q ss_pred CCHHHHHHHHHHHHHHCCCC------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPED------ALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPG------DGNVLSMYGDLIWI 201 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~n------a~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~------da~al~~lG~ll~~ 201 (224)
+++++|+.+|++|++..+.. +.++.++|.++. ..|++++|+++|++++++.+. .+.++..+|.+++.
T Consensus 63 g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~ 141 (164)
T 3ro3_A 63 GEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYT-LLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTA 141 (164)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHH
Confidence 68999999999999986553 578899999887 699999999999999987432 24567788888766
Q ss_pred HcCChHHHHHHHHHHHHhCC
Q 027404 202 NHKDAPRAKSYFDRAVHSAP 221 (224)
Q Consensus 202 ~~gd~eeA~~~ferAL~l~P 221 (224)
.+++++|+.+|++++++..
T Consensus 142 -~g~~~~A~~~~~~a~~~~~ 160 (164)
T 3ro3_A 142 -LGNHDQAMHFAEKHLEISR 160 (164)
T ss_dssp -HTCHHHHHHHHHHHHHHHT
T ss_pred -ccCHHHHHHHHHHHHHHHH
Confidence 5789999999999998754
No 155
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.80 E-value=1.1e-08 Score=80.18 Aligned_cols=84 Identities=10% Similarity=0.096 Sum_probs=64.9
Q ss_pred CCHHHHHHHHHHHHH------HCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CCCC----HHHHHHHHHHHH
Q 027404 134 KESESMDVYYQEMIK------AYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILA---KPGD----GNVLSMYGDLIW 200 (224)
Q Consensus 134 ~d~e~A~~~yerALe------~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~l---dP~d----a~al~~lG~ll~ 200 (224)
+++++|+.+|++|++ ..|..+.++.++|.++. ..|++++|+.+|++|+.+ .+++ +.++.++|.+++
T Consensus 40 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~ 118 (203)
T 3gw4_A 40 DRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVER-MAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVAL 118 (203)
T ss_dssp TCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHH
Confidence 688888888888888 44555678888888876 688888899988888887 4433 456777887776
Q ss_pred HHcCChHHHHHHHHHHHHh
Q 027404 201 INHKDAPRAKSYFDRAVHS 219 (224)
Q Consensus 201 ~~~gd~eeA~~~ferAL~l 219 (224)
. .|++++|+.+|++++++
T Consensus 119 ~-~g~~~~A~~~~~~al~~ 136 (203)
T 3gw4_A 119 H-FGDLAGARQEYEKSLVY 136 (203)
T ss_dssp H-HTCHHHHHHHHHHHHHH
T ss_pred H-hCCHHHHHHHHHHHHHH
Confidence 5 46888888888888865
No 156
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.80 E-value=2.4e-08 Score=92.94 Aligned_cols=84 Identities=11% Similarity=0.018 Sum_probs=72.1
Q ss_pred CCHHHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHH---HHHHHHH
Q 027404 134 KESESMDVYYQEMIKA-----YPEDA---LVLANYAKFLKEIRGDFVKAEEYCGRAILA-----KPGDGN---VLSMYGD 197 (224)
Q Consensus 134 ~d~e~A~~~yerALe~-----dP~na---~~l~nlA~~l~e~~Gd~eeAe~~~erAL~l-----dP~da~---al~~lG~ 197 (224)
+++++|+.+|+++|++ .|+|+ .++.|+|.++. .+|++++|+.+|++||++ .|+|+. .++++|.
T Consensus 312 g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~-~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~ 390 (433)
T 3qww_A 312 KSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCL-YMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGR 390 (433)
T ss_dssp SCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHH-hhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Confidence 6899999999999985 67776 56779999887 699999999999999975 566666 4778998
Q ss_pred HHHHHcCChHHHHHHHHHHHHh
Q 027404 198 LIWINHKDAPRAKSYFDRAVHS 219 (224)
Q Consensus 198 ll~~~~gd~eeA~~~ferAL~l 219 (224)
+++. .|++++|+.+|++|+++
T Consensus 391 ~~~~-qg~~~eA~~~~~~Al~i 411 (433)
T 3qww_A 391 LYMG-LENKAAGEKALKKAIAI 411 (433)
T ss_dssp HHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHh-ccCHHHHHHHHHHHHHH
Confidence 8876 57999999999999986
No 157
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.80 E-value=1.8e-08 Score=92.67 Aligned_cols=88 Identities=17% Similarity=0.162 Sum_probs=41.5
Q ss_pred CCHHHHHHHHHHHHHHCCCCH-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDA-LVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSY 212 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na-~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~ 212 (224)
+++++|...|++||+++|.++ .+|.+++.++. .+|++++|+++|++|++..|.+..++...+.+.+...|++++|..+
T Consensus 335 g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~~~~~~~A~~~ 413 (530)
T 2ooe_A 335 MKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFAR-RAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKI 413 (530)
T ss_dssp TCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred CCHHHHHHHHHHHhCccccCchHHHHHHHHHHH-HhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHcCChhHHHHH
Confidence 466666666666666666664 46666655543 3344444444444444444333333332222211223444444444
Q ss_pred HHHHHHhCCC
Q 027404 213 FDRAVHSAPD 222 (224)
Q Consensus 213 ferAL~l~P~ 222 (224)
|++|++..|+
T Consensus 414 ~e~al~~~p~ 423 (530)
T 2ooe_A 414 FELGLKKYGD 423 (530)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHCCC
Confidence 4444444443
No 158
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.79 E-value=1.9e-08 Score=82.48 Aligned_cols=84 Identities=12% Similarity=0.035 Sum_probs=71.7
Q ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHH---c
Q 027404 133 GKESESMDVYYQEMIKAYPEDALVLANYAKFLKEI----RGDFVKAEEYCGRAILAKP--GDGNVLSMYGDLIWIN---H 203 (224)
Q Consensus 133 ~~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~----~Gd~eeAe~~~erAL~ldP--~da~al~~lG~ll~~~---~ 203 (224)
..++++|+.+|++|+ +++++.+++++|.++. . .+++++|+.+|++|++..| +++.++.++|.++..- .
T Consensus 66 ~~~~~~A~~~~~~A~--~~g~~~a~~~Lg~~y~-~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~ 142 (212)
T 3rjv_A 66 QADYPQARQLAEKAV--EAGSKSGEIVLARVLV-NRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGP 142 (212)
T ss_dssp SCCHHHHHHHHHHHH--HTTCHHHHHHHHHHHT-CGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSS
T ss_pred CCCHHHHHHHHHHHH--HCCCHHHHHHHHHHHH-cCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCC
Confidence 358999999999995 4689999999998875 4 6799999999999999988 4589999999887651 3
Q ss_pred CChHHHHHHHHHHHHh
Q 027404 204 KDAPRAKSYFDRAVHS 219 (224)
Q Consensus 204 gd~eeA~~~ferAL~l 219 (224)
+++++|+.+|++|+++
T Consensus 143 ~d~~~A~~~~~~A~~~ 158 (212)
T 3rjv_A 143 EDDVKASEYFKGSSSL 158 (212)
T ss_dssp CCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHc
Confidence 5899999999999988
No 159
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.78 E-value=7.6e-09 Score=85.54 Aligned_cols=87 Identities=15% Similarity=0.202 Sum_probs=76.5
Q ss_pred CCCHHHHHHHHHHHHHHC--------CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHH
Q 027404 133 GKESESMDVYYQEMIKAY--------PEDALVLANYAKFLKEIRGDFVKAEEYCGRAILA--------KPGDGNVLSMYG 196 (224)
Q Consensus 133 ~~d~e~A~~~yerALe~d--------P~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~l--------dP~da~al~~lG 196 (224)
.+++++|+.+|+++++.. |....++.++|.++. ..|++++|+++|++++++ +|....++..+|
T Consensus 124 ~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la 202 (311)
T 3nf1_A 124 RGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQ-NQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLA 202 (311)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 378999999999999984 666788999999987 699999999999999998 777788899999
Q ss_pred HHHHHHcCChHHHHHHHHHHHHhCC
Q 027404 197 DLIWINHKDAPRAKSYFDRAVHSAP 221 (224)
Q Consensus 197 ~ll~~~~gd~eeA~~~ferAL~l~P 221 (224)
.++.. .|++++|+.+|++++++.|
T Consensus 203 ~~~~~-~g~~~~A~~~~~~al~~~~ 226 (311)
T 3nf1_A 203 SCYLK-QGKFKQAETLYKEILTRAH 226 (311)
T ss_dssp HHHHH-HTCHHHHHHHHHHHHHHHH
T ss_pred HHHHH-cCCHHHHHHHHHHHHHHHH
Confidence 98876 5789999999999998643
No 160
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.78 E-value=1.5e-08 Score=73.08 Aligned_cols=69 Identities=13% Similarity=0.148 Sum_probs=62.3
Q ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC
Q 027404 152 EDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPD 222 (224)
Q Consensus 152 ~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~ferAL~l~P~ 222 (224)
..+.+++.+|.++. ..|++++|+.+|++++..+|+++.++..+|.++.. .+++++|+.+|++++.+.|+
T Consensus 2 ~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~~~ 70 (131)
T 1elr_A 2 KQALKEKELGNDAY-KKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFE-KGDYNKCRELCEKAIEVGRE 70 (131)
T ss_dssp HHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHH-hccHHHHHHHHHHHHhhccc
Confidence 34678999999887 69999999999999999999999999999998876 57899999999999998774
No 161
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=98.78 E-value=1.4e-08 Score=93.38 Aligned_cols=76 Identities=8% Similarity=-0.017 Sum_probs=65.5
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKS 211 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~ 211 (224)
+++++|+.+|++||+++|+++.+++++|.++. .+|++++|+.+|++|++++|++..++..++.++..+ +++++|..
T Consensus 331 g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~-~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~-~~~~~a~~ 406 (457)
T 1kt0_A 331 REYTKAVECCDKALGLDSANEKGLYRRGEAQL-LMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKA-KEHNERDR 406 (457)
T ss_dssp TCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHH-HHHHHHHH
T ss_pred cCHHHHHHHHHHHHhcCCccHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH-HHHHHHHH
Confidence 79999999999999999999999999999987 699999999999999999999999999999887654 56776664
No 162
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.77 E-value=7.7e-09 Score=88.07 Aligned_cols=87 Identities=8% Similarity=0.033 Sum_probs=71.6
Q ss_pred CCCHHHHHHHHHHHHHHCCCC------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-------CCCCHHHHHHHHHHH
Q 027404 133 GKESESMDVYYQEMIKAYPED------ALVLANYAKFLKEIRGDFVKAEEYCGRAILA-------KPGDGNVLSMYGDLI 199 (224)
Q Consensus 133 ~~d~e~A~~~yerALe~dP~n------a~~l~nlA~~l~e~~Gd~eeAe~~~erAL~l-------dP~da~al~~lG~ll 199 (224)
.+++++|+.+|++|++..+.. ..++.++|.++. .+|++++|+.+|++|++. .+..+.++.++|.++
T Consensus 128 ~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y 206 (293)
T 3u3w_A 128 KVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYA-ENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKAL 206 (293)
T ss_dssp SSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHH
Confidence 368999999999999975543 347899999887 699999999999999952 223345788999988
Q ss_pred HHHcCChHHHHHHHHHHHHhCC
Q 027404 200 WINHKDAPRAKSYFDRAVHSAP 221 (224)
Q Consensus 200 ~~~~gd~eeA~~~ferAL~l~P 221 (224)
.. .+++++|+.+|++|+++.+
T Consensus 207 ~~-~~~y~~A~~~~~~al~~~~ 227 (293)
T 3u3w_A 207 YL-DSRYEESLYQVNKAIEISC 227 (293)
T ss_dssp HH-TTCHHHHHHHHHHHHHHHH
T ss_pred HH-HhHHHHHHHHHHHHHHHHH
Confidence 76 5799999999999998764
No 163
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.77 E-value=2.2e-08 Score=87.67 Aligned_cols=85 Identities=15% Similarity=0.161 Sum_probs=75.4
Q ss_pred CCHHHHHHHHHHHHHHCCCCH------HHHHHHHHHHHHHcCCHHHHHHHHHHHHH-----hC-CCCHHHHHHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDA------LVLANYAKFLKEIRGDFVKAEEYCGRAIL-----AK-PGDGNVLSMYGDLIWI 201 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na------~~l~nlA~~l~e~~Gd~eeAe~~~erAL~-----ld-P~da~al~~lG~ll~~ 201 (224)
+++++|+.+|++|+++.+... .+++++|.++. .+|++++|+.+|++|++ .+ |..+.++.++|.++..
T Consensus 198 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~ 276 (383)
T 3ulq_A 198 KQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKN-SQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYK 276 (383)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHH
Confidence 799999999999998865443 58999999987 69999999999999999 56 8889999999998876
Q ss_pred HcCChHHHHHHHHHHHHhC
Q 027404 202 NHKDAPRAKSYFDRAVHSA 220 (224)
Q Consensus 202 ~~gd~eeA~~~ferAL~l~ 220 (224)
.|++++|+.+|++|+++.
T Consensus 277 -~g~~~~A~~~~~~al~~~ 294 (383)
T 3ulq_A 277 -LGKIDKAHEYHSKGMAYS 294 (383)
T ss_dssp -TTCHHHHHHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHHHHHH
Confidence 578999999999999874
No 164
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.77 E-value=1.4e-07 Score=73.00 Aligned_cols=82 Identities=16% Similarity=0.180 Sum_probs=71.9
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH---cCCh
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEI----RGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWIN---HKDA 206 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~----~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~---~gd~ 206 (224)
..+++|..+|++|++. +++.+++++|.++. . .+|+++|+++|++|++. .++.++.++|.++..- .+++
T Consensus 39 ~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~ 113 (138)
T 1klx_A 39 INKQKLFQYLSKACEL--NSGNGCRFLGDFYE-NGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYAGKGVVKNE 113 (138)
T ss_dssp SCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCH
T ss_pred CCHHHHHHHHHHHHcC--CCHHHHHHHHHHHH-cCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHCCCCCCcCH
Confidence 4677899999999987 78999999999876 5 68999999999999987 7899999999887541 4789
Q ss_pred HHHHHHHHHHHHhC
Q 027404 207 PRAKSYFDRAVHSA 220 (224)
Q Consensus 207 eeA~~~ferAL~l~ 220 (224)
++|+.+|++|.+..
T Consensus 114 ~~A~~~~~~Aa~~g 127 (138)
T 1klx_A 114 KQAVKTFEKACRLG 127 (138)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHCC
Confidence 99999999999874
No 165
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.76 E-value=3.5e-08 Score=84.63 Aligned_cols=71 Identities=17% Similarity=0.087 Sum_probs=66.4
Q ss_pred CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC
Q 027404 151 PEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 151 P~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~ferAL~l~P~d 223 (224)
|.++.+++++|..+. ..|++++|+.+|++|++++|+++.++.++|.++.. .+++++|+.+|++|++++|++
T Consensus 1 p~~a~~~~~~g~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~~~~~~A~~~~~~al~~~p~~ 71 (281)
T 2c2l_A 1 SPSAQELKEQGNRLF-VGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLK-MQQPEQALADCRRALELDGQS 71 (281)
T ss_dssp CCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHTTSCTTC
T ss_pred ChhHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHhCCCC
Confidence 678899999999987 69999999999999999999999999999998876 579999999999999999986
No 166
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.76 E-value=4.9e-08 Score=83.07 Aligned_cols=84 Identities=13% Similarity=0.090 Sum_probs=72.6
Q ss_pred CCHHHHHHHHHHHH---HHCCCCH----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHH
Q 027404 134 KESESMDVYYQEMI---KAYPEDA----LVLANYAKFLKEIRGDFVKAEEYCGRAILAKPG------DGNVLSMYGDLIW 200 (224)
Q Consensus 134 ~d~e~A~~~yerAL---e~dP~na----~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~------da~al~~lG~ll~ 200 (224)
+++++|+.+|++|+ +..|++. .+++++|.++. .+|++++|+.+|++|+++.++ -+.++.++|.++.
T Consensus 169 ~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~-~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~ 247 (293)
T 2qfc_A 169 GYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALY-LDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLR 247 (293)
T ss_dssp TCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHH-HHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH
Confidence 79999999999999 6677754 68999999987 699999999999999988653 2778899998876
Q ss_pred HHcCChHHH-HHHHHHHHHh
Q 027404 201 INHKDAPRA-KSYFDRAVHS 219 (224)
Q Consensus 201 ~~~gd~eeA-~~~ferAL~l 219 (224)
. .|++++| ..+|++|+.+
T Consensus 248 ~-~g~~~~Ai~~~~~~Al~~ 266 (293)
T 2qfc_A 248 K-LEYEEAEIEDAYKKASFF 266 (293)
T ss_dssp H-TTCCHHHHHHHHHHHHHH
T ss_pred H-cCCcHHHHHHHHHHHHHH
Confidence 5 5789999 8889999875
No 167
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.76 E-value=6.2e-09 Score=89.77 Aligned_cols=86 Identities=14% Similarity=0.149 Sum_probs=70.3
Q ss_pred CCHHHHHHHHHHHHHHCCC--C----HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPE--D----ALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGD------GNVLSMYGDLIWI 201 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~--n----a~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~d------a~al~~lG~ll~~ 201 (224)
+++++|+.+|++|+++.+. + +.++.++|.++. . |++++|+.+|++|+++.|.. +.++.++|.++..
T Consensus 90 g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~-~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~ 167 (307)
T 2ifu_A 90 QRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLME-P-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVR 167 (307)
T ss_dssp TCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHT-T-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-c-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHH
Confidence 5789999999999988432 2 467889998875 5 99999999999999987754 5678889988765
Q ss_pred HcCChHHHHHHHHHHHHhCCC
Q 027404 202 NHKDAPRAKSYFDRAVHSAPD 222 (224)
Q Consensus 202 ~~gd~eeA~~~ferAL~l~P~ 222 (224)
.|++++|+.+|++++++.|+
T Consensus 168 -~g~~~~A~~~~~~al~~~~~ 187 (307)
T 2ifu_A 168 -QQKFDEAAASLQKEKSMYKE 187 (307)
T ss_dssp -TTCHHHHHHHHHHHHHHHHH
T ss_pred -cCCHHHHHHHHHHHHHHHHH
Confidence 57899999999999987653
No 168
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=98.74 E-value=3.4e-08 Score=80.89 Aligned_cols=68 Identities=19% Similarity=0.198 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-------CHH-----HHHHHHHHHHHHcCChHHHHHHHHHHHHh--
Q 027404 154 ALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPG-------DGN-----VLSMYGDLIWINHKDAPRAKSYFDRAVHS-- 219 (224)
Q Consensus 154 a~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~-------da~-----al~~lG~ll~~~~gd~eeA~~~ferAL~l-- 219 (224)
+..+.+.|..+. ..|++++|+.+|++||+++|+ +.. +|.++|.++.. .|++++|+.+|++||++
T Consensus 11 a~~~~~~G~~l~-~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~-Lgr~~eAl~~~~kAL~l~n 88 (159)
T 2hr2_A 11 AYLALSDAQRQL-VAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAG-LRSFDEALHSADKALHYFN 88 (159)
T ss_dssp HHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhhh
Confidence 567888999887 699999999999999999999 444 99999998876 47999999999999999
Q ss_pred -----CCCC
Q 027404 220 -----APDD 223 (224)
Q Consensus 220 -----~P~d 223 (224)
+|++
T Consensus 89 ~~~e~~pd~ 97 (159)
T 2hr2_A 89 RRGELNQDE 97 (159)
T ss_dssp HHCCTTSTH
T ss_pred ccccCCCch
Confidence 9975
No 169
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.73 E-value=1.2e-07 Score=87.32 Aligned_cols=87 Identities=14% Similarity=0.051 Sum_probs=72.1
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH-------------------------------------------HHHcCC
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFL-------------------------------------------KEIRGD 170 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l-------------------------------------------~e~~Gd 170 (224)
.++.+|+.+|++||++||+++.++..++.++ ....|+
T Consensus 213 ~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~~a~~~~alal~~l~~gd 292 (372)
T 3ly7_A 213 KSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNNLSIIYQIKAVSALVKGK 292 (372)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTTCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCcCHHHHHHHHHHHHhCCC
Confidence 5678999999999999999987777433322 113699
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC
Q 027404 171 FVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPD 222 (224)
Q Consensus 171 ~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~ferAL~l~P~ 222 (224)
+++|+++++||+.++|+ ..+|..+|.++. ..|++++|++.|++|+.++|.
T Consensus 293 ~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~-~~G~~~eA~e~~~~AlrL~P~ 342 (372)
T 3ly7_A 293 TDESYQAINTGIDLEMS-WLNYVLLGKVYE-MKGMNREAADAYLTAFNLRPG 342 (372)
T ss_dssp HHHHHHHHHHHHHHCCC-HHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSCS
T ss_pred HHHHHHHHHHHHhcCCC-HHHHHHHHHHHH-HCCCHHHHHHHHHHHHhcCCC
Confidence 99999999999999975 677778887764 578999999999999999996
No 170
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.72 E-value=4.7e-08 Score=71.64 Aligned_cols=67 Identities=18% Similarity=0.132 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC
Q 027404 155 LVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDG---NVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 155 ~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da---~al~~lG~ll~~~~gd~eeA~~~ferAL~l~P~d 223 (224)
.+++++|..+. ..|++++|+.+|+++++.+|+++ .++..+|.+++. .+++++|+.+|+++++.+|++
T Consensus 3 ~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~-~~~~~~A~~~~~~~~~~~p~~ 72 (129)
T 2xev_A 3 RTAYNVAFDAL-KNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYA-TRNFQLAEAQFRDLVSRYPTH 72 (129)
T ss_dssp CCHHHHHHHHH-HTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHHH-HhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHCCCC
Confidence 45788888887 69999999999999999999998 799999998876 589999999999999999975
No 171
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.71 E-value=5.3e-08 Score=70.74 Aligned_cols=65 Identities=12% Similarity=0.085 Sum_probs=55.7
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPG--DGNVLSMYGDLI 199 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~--da~al~~lG~ll 199 (224)
+++++|+.+|++|++++|+++.+++++|.++. ..|++++|+++|++|++++|. +..+...+..++
T Consensus 21 g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~g~~~~A~~~~~~al~l~~~~~~~~~~~~l~~~l 87 (100)
T 3ma5_A 21 DNASRALALFEELVETDPDYVGTYYHLGKLYE-RLDRTDDAIDTYAQGIEVAREEGTQKDLSELQDAK 87 (100)
T ss_dssp TCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhhhhcCCchhHHHHHHHHH
Confidence 78999999999999999999999999999987 699999999999999998774 444444444443
No 172
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.71 E-value=4.4e-08 Score=93.57 Aligned_cols=88 Identities=8% Similarity=-0.044 Sum_probs=72.9
Q ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc----------
Q 027404 135 ESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRG-DFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINH---------- 203 (224)
Q Consensus 135 d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~G-d~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~---------- 203 (224)
++++|.+++.+||+.||.|..+|..-+.++. ..+ .+++|+++++++|+.+|.+..+|++.+.++..+.
T Consensus 124 ~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~-~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~ll~~l~~~~~~~~~~~ 202 (567)
T 1dce_A 124 NWARELELCARFLEADERNFHCWDYRRFVAA-QAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGR 202 (567)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHHSCCCCSSSCCS
T ss_pred cHHHHHHHHHHHHhhccccccHHHHHHHHHH-HcCCChHHHHHHHHHHHHHCCCCccHHHHHHHHHHhhccccccccccc
Confidence 5788888888888888888888888888776 577 8888888888888888888888888887776531
Q ss_pred ---CChHHHHHHHHHHHHhCCCC
Q 027404 204 ---KDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 204 ---gd~eeA~~~ferAL~l~P~d 223 (224)
+.+++|++++++|+.++|+|
T Consensus 203 ~~~~~~~eel~~~~~ai~~~P~~ 225 (567)
T 1dce_A 203 LPENVLLKELELVQNAFFTDPND 225 (567)
T ss_dssp SCHHHHHHHHHHHHHHHHHCSSC
T ss_pred ccHHHHHHHHHHHHHHHhhCCCC
Confidence 34788889999999988876
No 173
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.71 E-value=2.4e-08 Score=89.96 Aligned_cols=76 Identities=12% Similarity=-0.013 Sum_probs=68.5
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKS 211 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~ 211 (224)
+++++|+.+|++||+++|+++.+++++|.++. ..|++++|+.+|++|++++|++..++..++.++..+ +++++|..
T Consensus 287 g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~-~~~~~a~k 362 (370)
T 1ihg_A 287 SDWQGAVDSCLEALEIDPSNTKALYRRAQGWQ-GLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKI-KAQKDKEK 362 (370)
T ss_dssp TCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCchhHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH-HHHHHHHH
Confidence 79999999999999999999999999999987 699999999999999999999999999999877654 45666554
No 174
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.71 E-value=3.5e-08 Score=93.11 Aligned_cols=86 Identities=12% Similarity=0.099 Sum_probs=73.2
Q ss_pred CCCCHHHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHH---HHHHH
Q 027404 132 SGKESESMDVYYQEMIKA-----YPEDA---LVLANYAKFLKEIRGDFVKAEEYCGRAILA-----KPGDGN---VLSMY 195 (224)
Q Consensus 132 ~~~d~e~A~~~yerALe~-----dP~na---~~l~nlA~~l~e~~Gd~eeAe~~~erAL~l-----dP~da~---al~~l 195 (224)
.+|++++|+.+|+++|++ .|+|+ .++.|+|.++. .+|++++|+.+|++||++ .|+|+. .++++
T Consensus 321 ~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~-~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nL 399 (490)
T 3n71_A 321 SEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLS-YLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRA 399 (490)
T ss_dssp TTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 458999999999999986 56665 67889999887 699999999999999975 667766 47789
Q ss_pred HHHHHHHcCChHHHHHHHHHHHHh
Q 027404 196 GDLIWINHKDAPRAKSYFDRAVHS 219 (224)
Q Consensus 196 G~ll~~~~gd~eeA~~~ferAL~l 219 (224)
|.+++. .|++++|+.+|++|+++
T Consensus 400 a~~~~~-~G~~~eA~~~~~~Al~i 422 (490)
T 3n71_A 400 GLTNWH-AGHIEVGHGMICKAYAI 422 (490)
T ss_dssp HHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHH-CCCHHHHHHHHHHHHHH
Confidence 988876 58999999999999985
No 175
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.70 E-value=4.4e-08 Score=85.98 Aligned_cols=87 Identities=15% Similarity=0.017 Sum_probs=76.4
Q ss_pred CCHHHHHHHHHHHHHHCC--C----CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-----hCCCCHHHHHHHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYP--E----DALVLANYAKFLKEIRGDFVKAEEYCGRAIL-----AKPGDGNVLSMYGDLIWIN 202 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP--~----na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~-----ldP~da~al~~lG~ll~~~ 202 (224)
+++++|+.+|++|+++.+ + .+.++.++|.++. .+|++++|+.+|++|+. .+|..+.++.++|.++..
T Consensus 196 ~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~- 273 (378)
T 3q15_A 196 KHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYD-RSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCK- 273 (378)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHH-
T ss_pred CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHH-
Confidence 799999999999999743 1 2468899999987 69999999999999999 888889999999998876
Q ss_pred cCChHHHHHHHHHHHHhCCC
Q 027404 203 HKDAPRAKSYFDRAVHSAPD 222 (224)
Q Consensus 203 ~gd~eeA~~~ferAL~l~P~ 222 (224)
.|++++|+.+|++|+++.+.
T Consensus 274 ~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 274 AGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp TTCHHHHHHHHHHHHHHCCT
T ss_pred CCCHHHHHHHHHHHHHHHHH
Confidence 57999999999999998653
No 176
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.68 E-value=4.5e-08 Score=80.64 Aligned_cols=87 Identities=14% Similarity=0.145 Sum_probs=67.1
Q ss_pred CCHHHHHHHHHHHHHHCCCC------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPED------ALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGD------GNVLSMYGDLIWI 201 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~n------a~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~d------a~al~~lG~ll~~ 201 (224)
+++++|+.+|+++++..+.. +.++.++|.++. .+|++++|+.+|++|+.+.+.. ..++..+|.++..
T Consensus 237 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~ 315 (338)
T 3ro2_A 237 GEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYT-LLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTA 315 (338)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Confidence 57888999999988887665 678888888876 6889999999999988875543 4467778877765
Q ss_pred HcCChHHHHHHHHHHHHhCCC
Q 027404 202 NHKDAPRAKSYFDRAVHSAPD 222 (224)
Q Consensus 202 ~~gd~eeA~~~ferAL~l~P~ 222 (224)
.|++++|+.+|++|+++.+.
T Consensus 316 -~g~~~~A~~~~~~a~~~~~~ 335 (338)
T 3ro2_A 316 -LGNHDQAMHFAEKHLEISRE 335 (338)
T ss_dssp -HTCHHHHHHHHHHHHHC---
T ss_pred -cCChHHHHHHHHHHHHHHHh
Confidence 47889999999999887764
No 177
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.67 E-value=1.9e-08 Score=88.03 Aligned_cols=86 Identities=15% Similarity=0.026 Sum_probs=59.8
Q ss_pred CCHHHHHHHHHHHHHH------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-------CHHHHHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKA------YPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPG-------DGNVLSMYGDLIW 200 (224)
Q Consensus 134 ~d~e~A~~~yerALe~------dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~-------da~al~~lG~ll~ 200 (224)
+++++|+.+|++|+++ ++..+.+++++|.++. ..|++++|+.+|++|+++.+. .+.++.++|.++.
T Consensus 117 g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~ 195 (383)
T 3ulq_A 117 REYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYY-YMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFL 195 (383)
T ss_dssp TCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHH
Confidence 5778888888888776 2224577777887776 578888888888888876433 2346677777665
Q ss_pred HHcCChHHHHHHHHHHHHhCC
Q 027404 201 INHKDAPRAKSYFDRAVHSAP 221 (224)
Q Consensus 201 ~~~gd~eeA~~~ferAL~l~P 221 (224)
. .|++++|+.+|++|+++.|
T Consensus 196 ~-~g~~~~A~~~~~~al~~~~ 215 (383)
T 3ulq_A 196 D-LKQYEDAISHFQKAYSMAE 215 (383)
T ss_dssp H-TTCHHHHHHHHHHHHHHHH
T ss_pred H-hcCHHHHHHHHHHHHHHHH
Confidence 4 4677888888887776643
No 178
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.67 E-value=1.5e-07 Score=83.83 Aligned_cols=90 Identities=14% Similarity=0.123 Sum_probs=80.4
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHH----HHHc--CC
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRG--DFVKAEEYCGRAILAKPGDGNVLSMYGDLI----WINH--KD 205 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~G--d~eeAe~~~erAL~ldP~da~al~~lG~ll----~~~~--gd 205 (224)
...++|+.++.++|++||++..+|+.-+.++. ..+ ++++|+++++++|..+|++..+|+..+.++ .... ++
T Consensus 47 e~s~~aL~~t~~~L~~nP~~~taWn~R~~~L~-~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~~~~~ 125 (306)
T 3dra_A 47 EYSERALHITELGINELASHYTIWIYRFNILK-NLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNNDFD 125 (306)
T ss_dssp CCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-TCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTTCCC
T ss_pred CCCHHHHHHHHHHHHHCcHHHHHHHHHHHHHH-HcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhccccCC
Confidence 34479999999999999999999999999987 577 999999999999999999999999998877 3331 68
Q ss_pred hHHHHHHHHHHHHhCCCCC
Q 027404 206 APRAKSYFDRAVHSAPDDW 224 (224)
Q Consensus 206 ~eeA~~~ferAL~l~P~d~ 224 (224)
+++++.++++++..+|.++
T Consensus 126 ~~~EL~~~~~~l~~~pkny 144 (306)
T 3dra_A 126 PYREFDILEAMLSSDPKNH 144 (306)
T ss_dssp THHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999863
No 179
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.66 E-value=1.1e-07 Score=90.78 Aligned_cols=87 Identities=8% Similarity=0.061 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHH
Q 027404 136 SESMDVYYQEMIKAYPEDALVLANYAKFLKEIRG--DFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 136 ~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~G--d~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~f 213 (224)
+++|..+|.+||+.+|.+..+|+.-++++. ..+ ++++|+++++++|+++|.+..+|.+.+.++......+++|++++
T Consensus 89 ~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~-~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~ 167 (567)
T 1dce_A 89 VKAELGFLESCLRVNPKSYGTWHHRCWLLS-RLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFT 167 (567)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-TCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHH
Confidence 899999999999999999999999999987 688 77999999999999999999999999988766533899999999
Q ss_pred HHHHHhCCCC
Q 027404 214 DRAVHSAPDD 223 (224)
Q Consensus 214 erAL~l~P~d 223 (224)
+++++++|.|
T Consensus 168 ~~~I~~~p~n 177 (567)
T 1dce_A 168 DSLITRNFSN 177 (567)
T ss_dssp HTTTTTTCCC
T ss_pred HHHHHHCCCC
Confidence 9999999986
No 180
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.66 E-value=7e-08 Score=82.69 Aligned_cols=85 Identities=14% Similarity=0.141 Sum_probs=69.5
Q ss_pred CCHHHHHHHHHHHHHHCCCC------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPED------ALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGD------GNVLSMYGDLIWI 201 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~n------a~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~d------a~al~~lG~ll~~ 201 (224)
+++++|+.+|++|+++.|.. +.++.++|.++. ..|++++|+.+|++|+++.+.. +.++..+|.++..
T Consensus 241 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~ 319 (406)
T 3sf4_A 241 GEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYT-LLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTA 319 (406)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Confidence 68899999999999887766 678888898876 6899999999999999886544 6677788887765
Q ss_pred HcCChHHHHHHHHHHHHhC
Q 027404 202 NHKDAPRAKSYFDRAVHSA 220 (224)
Q Consensus 202 ~~gd~eeA~~~ferAL~l~ 220 (224)
.|++++|+.+|++|+++.
T Consensus 320 -~g~~~~A~~~~~~al~~~ 337 (406)
T 3sf4_A 320 -LGNHDQAMHFAEKHLEIS 337 (406)
T ss_dssp -HTCHHHHHHHHHHHHHHH
T ss_pred -cCCHHHHHHHHHHHHHHH
Confidence 478999999999988764
No 181
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.64 E-value=6.9e-08 Score=75.57 Aligned_cols=85 Identities=19% Similarity=0.150 Sum_probs=69.4
Q ss_pred CCHHHHHHHHHHHHHH---CCCC----HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--CCH----HHHHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKA---YPED----ALVLANYAKFLKEIRGDFVKAEEYCGRAILAKP--GDG----NVLSMYGDLIW 200 (224)
Q Consensus 134 ~d~e~A~~~yerALe~---dP~n----a~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP--~da----~al~~lG~ll~ 200 (224)
+++++|+.+|++|+++ .+++ +.++.++|.++. ..|++++|+.+|++++++.+ .+. .++.++|.+++
T Consensus 80 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~ 158 (203)
T 3gw4_A 80 GNWDAARRCFLEERELLASLPEDPLAASANAYEVATVAL-HFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQ 158 (203)
T ss_dssp TCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 6899999999999998 4533 467899999887 69999999999999997643 232 34577888776
Q ss_pred HHcCChHHHHHHHHHHHHhC
Q 027404 201 INHKDAPRAKSYFDRAVHSA 220 (224)
Q Consensus 201 ~~~gd~eeA~~~ferAL~l~ 220 (224)
. .|++++|+.+|++|+++.
T Consensus 159 ~-~g~~~~A~~~~~~al~~~ 177 (203)
T 3gw4_A 159 Q-EKNLLEAQQHWLRARDIF 177 (203)
T ss_dssp H-TTCHHHHHHHHHHHHHHH
T ss_pred H-CcCHHHHHHHHHHHHHHH
Confidence 5 589999999999999863
No 182
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.63 E-value=1.7e-07 Score=68.43 Aligned_cols=64 Identities=14% Similarity=0.100 Sum_probs=55.4
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CHHHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPG--DGNVLSMYGDL 198 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~--da~al~~lG~l 198 (224)
+++++|+.+|++|++++|+++.+++++|.++. ..|++++|+.+|+++++++|. +..++..+..+
T Consensus 33 g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~l~~~ 98 (115)
T 2kat_A 33 EQFDAALPHLRAALDFDPTYSVAWKWLGKTLQ-GQGDRAGARQAWESGLAAAQSRGDQQVVKELQVF 98 (115)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhccccccHHHHHHHHHH
Confidence 68999999999999999999999999999987 699999999999999999885 44444444433
No 183
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.61 E-value=3e-08 Score=86.21 Aligned_cols=85 Identities=16% Similarity=0.070 Sum_probs=59.2
Q ss_pred CCHHHHHHHHHHHHHHCCCCHH------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDAL------VLANYAKFLKEIRGDFVKAEEYCGRAILAKPGD------GNVLSMYGDLIWI 201 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~------~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~d------a~al~~lG~ll~~ 201 (224)
+++++|+.+|++|+++.|.+.. ++.++|.++. .+|++++|+.+|++++.+.|.. +.++..+|.++..
T Consensus 237 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~ 315 (411)
T 4a1s_A 237 GDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHI-FLGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYTL 315 (411)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH-HCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 5777777777777777664333 6777777766 5777777777777777776643 5566677766654
Q ss_pred HcCChHHHHHHHHHHHHhC
Q 027404 202 NHKDAPRAKSYFDRAVHSA 220 (224)
Q Consensus 202 ~~gd~eeA~~~ferAL~l~ 220 (224)
.|++++|+.+|++++++.
T Consensus 316 -~g~~~~A~~~~~~al~~~ 333 (411)
T 4a1s_A 316 -LHEFNTAIEYHNRHLAIA 333 (411)
T ss_dssp -TTCHHHHHHHHHHHHHHH
T ss_pred -cCCHHHHHHHHHHHHHHH
Confidence 467777777777777654
No 184
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.61 E-value=3.7e-07 Score=82.40 Aligned_cols=88 Identities=8% Similarity=-0.053 Sum_probs=74.8
Q ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc----------
Q 027404 135 ESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGD-FVKAEEYCGRAILAKPGDGNVLSMYGDLIWINH---------- 203 (224)
Q Consensus 135 d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd-~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~---------- 203 (224)
.++++..++.++|+.||.|..+|..-+.++. ..+. +++++++++++|+.+|.|..+|.+.+.++....
T Consensus 125 ~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~-~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l~~~~~~~~~~~ 203 (331)
T 3dss_A 125 NWARELELCARFLEADERNFHCWDYRRFVAA-QAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGR 203 (331)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHHSCCC------C
T ss_pred cHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhhhccccccccc
Confidence 5788999999999999999999998888776 5777 689999999999999999999998888776552
Q ss_pred ---CChHHHHHHHHHHHHhCCCC
Q 027404 204 ---KDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 204 ---gd~eeA~~~ferAL~l~P~d 223 (224)
+.++++++++++|+.++|+|
T Consensus 204 ~~~~~~~eEle~~~~ai~~~P~d 226 (331)
T 3dss_A 204 LPENVLLKELELVQNAFFTDPND 226 (331)
T ss_dssp CCHHHHHHHHHHHHHHHHHSTTC
T ss_pred cchHHHHHHHHHHHHHHHhCCCC
Confidence 34788999999999999986
No 185
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.58 E-value=9.9e-08 Score=88.33 Aligned_cols=85 Identities=16% Similarity=0.004 Sum_probs=71.9
Q ss_pred CCCHHHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHH---HHHHHH
Q 027404 133 GKESESMDVYYQEMIKA-----YPEDA---LVLANYAKFLKEIRGDFVKAEEYCGRAILA-----KPGDGN---VLSMYG 196 (224)
Q Consensus 133 ~~d~e~A~~~yerALe~-----dP~na---~~l~nlA~~l~e~~Gd~eeAe~~~erAL~l-----dP~da~---al~~lG 196 (224)
++++++|+.+|+++|++ .|+|+ .++.++|.++. .+|++++|+.+|+++|++ .|+|+. .++++|
T Consensus 300 ~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~-~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa 378 (429)
T 3qwp_A 300 HWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACI-NLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVG 378 (429)
T ss_dssp TTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHH
Confidence 36889999999999975 56776 57788998887 699999999999999975 567766 477899
Q ss_pred HHHHHHcCChHHHHHHHHHHHHh
Q 027404 197 DLIWINHKDAPRAKSYFDRAVHS 219 (224)
Q Consensus 197 ~ll~~~~gd~eeA~~~ferAL~l 219 (224)
.+++. .|++++|+.+|++|+++
T Consensus 379 ~~~~~-~g~~~eA~~~~~~Al~i 400 (429)
T 3qwp_A 379 KLQLH-QGMFPQAMKNLRLAFDI 400 (429)
T ss_dssp HHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHh-cCCHHHHHHHHHHHHHH
Confidence 88876 57899999999999985
No 186
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.56 E-value=4.6e-07 Score=82.51 Aligned_cols=90 Identities=11% Similarity=0.046 Sum_probs=81.4
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC-ChHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRG-DFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHK-DAPRAKS 211 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~G-d~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~g-d~eeA~~ 211 (224)
+..++|+.++.++|.+||.+..+|+.-+.++. ..+ ++++|+++++++|..+|++..+|+..+.++....+ +++++++
T Consensus 68 e~se~AL~lt~~~L~~nP~~ytaWn~R~~iL~-~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~ 146 (349)
T 3q7a_A 68 EKSERALELTEIIVRMNPAHYTVWQYRFSLLT-SLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEIE 146 (349)
T ss_dssp CCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHH
T ss_pred CCCHHHHHHHHHHHHhCchhHHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHHH
Confidence 34578999999999999999999999999987 577 69999999999999999999999999988876535 8999999
Q ss_pred HHHHHHHhCCCCC
Q 027404 212 YFDRAVHSAPDDW 224 (224)
Q Consensus 212 ~ferAL~l~P~d~ 224 (224)
++++++..+|.++
T Consensus 147 ~~~k~L~~dpkNy 159 (349)
T 3q7a_A 147 YIHGSLLPDPKNY 159 (349)
T ss_dssp HHHHHTSSCTTCH
T ss_pred HHHHHHHhCCCCH
Confidence 9999999999863
No 187
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.52 E-value=2.2e-07 Score=82.32 Aligned_cols=87 Identities=8% Similarity=-0.138 Sum_probs=70.5
Q ss_pred CCHHHHHHHHHHHHHHC-CCC-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CC-CHHHHHHHHHHHHHHcCChHH
Q 027404 134 KESESMDVYYQEMIKAY-PED-ALVLANYAKFLKEIRGDFVKAEEYCGRAILAK--PG-DGNVLSMYGDLIWINHKDAPR 208 (224)
Q Consensus 134 ~d~e~A~~~yerALe~d-P~n-a~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ld--P~-da~al~~lG~ll~~~~gd~ee 208 (224)
+++++|+.+|++++... |.. ..+++++|.++. ..|++++|+.+|++++... |. ..++++++|.++.. .|+.++
T Consensus 149 ~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~-~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~-lGr~de 226 (282)
T 4f3v_A 149 ERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAA-NLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRS-QGNESA 226 (282)
T ss_dssp TCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHH-HTCHHH
T ss_pred CCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHH-HCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHH-cCCHHH
Confidence 67778888887776643 211 358999999886 6999999999999999654 55 66789999988876 578999
Q ss_pred HHHHHHHHHHhCCC
Q 027404 209 AKSYFDRAVHSAPD 222 (224)
Q Consensus 209 A~~~ferAL~l~P~ 222 (224)
|...|++++..+|+
T Consensus 227 A~~~l~~a~a~~P~ 240 (282)
T 4f3v_A 227 AVALLEWLQTTHPE 240 (282)
T ss_dssp HHHHHHHHHHHSCC
T ss_pred HHHHHHHHHhcCCc
Confidence 99999999999996
No 188
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.51 E-value=5.7e-07 Score=80.03 Aligned_cols=88 Identities=11% Similarity=0.088 Sum_probs=80.0
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC------
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFV--KAEEYCGRAILAKPGDGNVLSMYGDLIWINHKD------ 205 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~e--eAe~~~erAL~ldP~da~al~~lG~ll~~~~gd------ 205 (224)
+++++++.++.++|+.+|.|..+|+.-+.++. ..++++ +++++++++|+.+|.+..+|.+.+.++... ++
T Consensus 124 ~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~-~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l-~~~~~~~~ 201 (306)
T 3dra_A 124 FDPYREFDILEAMLSSDPKNHHVWSYRKWLVD-TFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFSK-KHLATDNT 201 (306)
T ss_dssp CCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHSS-GGGCCHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhc-cccchhhh
Confidence 46799999999999999999999999999886 689888 999999999999999999999998777543 44
Q ss_pred hHHHHHHHHHHHHhCCCC
Q 027404 206 APRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 206 ~eeA~~~ferAL~l~P~d 223 (224)
++++++++++++.++|+|
T Consensus 202 ~~eEl~~~~~aI~~~p~n 219 (306)
T 3dra_A 202 IDEELNYVKDKIVKCPQN 219 (306)
T ss_dssp HHHHHHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHHhCCCC
Confidence 899999999999999987
No 189
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.51 E-value=2.5e-07 Score=80.13 Aligned_cols=86 Identities=14% Similarity=0.105 Sum_probs=44.1
Q ss_pred CCHHHHHHHHHHHHHHCCCCH------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------CCCHHHHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDA------LVLANYAKFLKEIRGDFVKAEEYCGRAILAK--------PGDGNVLSMYGDLI 199 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na------~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ld--------P~da~al~~lG~ll 199 (224)
+++++|+.+|++|+++.|... .++.++|.++. .+|++++|+.+|++++++. |....++.++|.++
T Consensus 67 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~-~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~ 145 (373)
T 1hz4_A 67 GELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILF-AQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLL 145 (373)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHH
Confidence 455566666666655443321 22445555554 4566666666666655543 22233444555554
Q ss_pred HHHcCChHHHHHHHHHHHHhCC
Q 027404 200 WINHKDAPRAKSYFDRAVHSAP 221 (224)
Q Consensus 200 ~~~~gd~eeA~~~ferAL~l~P 221 (224)
+. .|++++|+.+|++++.+.|
T Consensus 146 ~~-~g~~~~A~~~~~~al~~~~ 166 (373)
T 1hz4_A 146 WA-WARLDEAEASARSGIEVLS 166 (373)
T ss_dssp HH-TTCHHHHHHHHHHHHHHTT
T ss_pred HH-hcCHHHHHHHHHHHHHHhh
Confidence 43 3556666666666655544
No 190
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.50 E-value=8e-07 Score=65.71 Aligned_cols=62 Identities=11% Similarity=0.131 Sum_probs=56.3
Q ss_pred CCHHHHHHHHHHHHHHC-------CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAY-------PEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYG 196 (224)
Q Consensus 134 ~d~e~A~~~yerALe~d-------P~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG 196 (224)
+++..|+.+|++|++.. +..+.++.+||.+++ .+|++++|+.++++|++++|++..++.+++
T Consensus 19 ~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~-~~g~~~~A~~~~~~al~l~P~~~~~~~n~~ 87 (104)
T 2v5f_A 19 ADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVY-QQGDLDKALLLTKKLLELDPEHQRANGNLK 87 (104)
T ss_dssp TCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred cchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHH-HccCHHHHHHHHHHHHhcCCCCHHHHhhHH
Confidence 68999999999999973 345789999999998 699999999999999999999999988876
No 191
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.49 E-value=7.5e-07 Score=81.06 Aligned_cols=83 Identities=16% Similarity=0.201 Sum_probs=60.7
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH---cCCh
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEI----RGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWIN---HKDA 206 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~----~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~---~gd~ 206 (224)
.++++|+.+|++|++. +++.+++++|.++. . .+++++|+.+|++|++. +++.++.++|.++..- .+++
T Consensus 345 ~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~-~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~Lg~~y~~g~g~~~d~ 419 (490)
T 2xm6_A 345 EEHKKAVEWFRKAAAK--GEKAAQFNLGNALL-QGKGVKKDEQQAAIWMRKAAEQ--GLSAAQVQLGEIYYYGLGVERDY 419 (490)
T ss_dssp HHHHHHHHHHHHHHHT--TCHHHHHHHHHHHH-HTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCH
T ss_pred ccHHHHHHHHHHHHHC--CCHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHcCCCCCCCH
Confidence 3677777777777776 56778888887765 4 57888888888888775 3677777888766541 4678
Q ss_pred HHHHHHHHHHHHhCC
Q 027404 207 PRAKSYFDRAVHSAP 221 (224)
Q Consensus 207 eeA~~~ferAL~l~P 221 (224)
++|+.+|++|++.+|
T Consensus 420 ~~A~~~~~~A~~~~~ 434 (490)
T 2xm6_A 420 VQAWAWFDTASTNDM 434 (490)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCC
Confidence 888888888887764
No 192
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.49 E-value=1e-06 Score=65.09 Aligned_cols=69 Identities=14% Similarity=0.142 Sum_probs=60.3
Q ss_pred CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-------CCCHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC
Q 027404 153 DALVLANYAKFLKEIRGDFVKAEEYCGRAILAK-------PGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 153 na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ld-------P~da~al~~lG~ll~~~~gd~eeA~~~ferAL~l~P~d 223 (224)
.+.-.+.+|.+++ .++++..|+.+|++|++.. +..+.++..+|.+++. .|++++|+.++++|++++|++
T Consensus 4 sa~dc~~lG~~~~-~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~-~g~~~~A~~~~~~al~l~P~~ 79 (104)
T 2v5f_A 4 TAEDCFELGKVAY-TEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQ-QGDLDKALLLTKKLLELDPEH 79 (104)
T ss_dssp CHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTC
T ss_pred CHHHHHHHHHHHH-HccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHhcCCCC
Confidence 4667789999998 6999999999999999863 3467889999999876 578999999999999999986
No 193
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.48 E-value=6.9e-07 Score=77.26 Aligned_cols=87 Identities=14% Similarity=0.026 Sum_probs=73.3
Q ss_pred CCCHHHHHHHHHHHHHHC--------CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHH
Q 027404 133 GKESESMDVYYQEMIKAY--------PEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGD-----GNVLSMYGDLI 199 (224)
Q Consensus 133 ~~d~e~A~~~yerALe~d--------P~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~d-----a~al~~lG~ll 199 (224)
.|++++|+.+|+++++.. |....++.++|.+++ ..|++++|+.+|++++++.|.. ..++..+|.++
T Consensus 106 ~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~ 184 (373)
T 1hz4_A 106 QGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLW-AWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCS 184 (373)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHH
Confidence 379999999999999875 445678889999887 6999999999999999998753 45677888877
Q ss_pred HHHcCChHHHHHHHHHHHHhCC
Q 027404 200 WINHKDAPRAKSYFDRAVHSAP 221 (224)
Q Consensus 200 ~~~~gd~eeA~~~ferAL~l~P 221 (224)
.. .|++++|+.++++++.+.+
T Consensus 185 ~~-~g~~~~A~~~l~~a~~~~~ 205 (373)
T 1hz4_A 185 LA-RGDLDNARSQLNRLENLLG 205 (373)
T ss_dssp HH-HTCHHHHHHHHHHHHHHHT
T ss_pred HH-cCCHHHHHHHHHHHHHHHh
Confidence 65 5899999999999998743
No 194
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.48 E-value=2.1e-07 Score=81.52 Aligned_cols=84 Identities=17% Similarity=-0.060 Sum_probs=58.3
Q ss_pred CCHHHHHHHHHHHHHHC------CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-------CHHHHHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAY------PEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPG-------DGNVLSMYGDLIW 200 (224)
Q Consensus 134 ~d~e~A~~~yerALe~d------P~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~-------da~al~~lG~ll~ 200 (224)
+++++|+.+|++|+++. |..+.+++++|.++. ..|++++|+.+|++|+++.+. .+.++.++|.++.
T Consensus 115 g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~ 193 (378)
T 3q15_A 115 KEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYY-HMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYD 193 (378)
T ss_dssp TCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHH-HcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHH
Confidence 57788888888887652 223567777787776 578888888888888776442 2345667777665
Q ss_pred HHcCChHHHHHHHHHHHHh
Q 027404 201 INHKDAPRAKSYFDRAVHS 219 (224)
Q Consensus 201 ~~~gd~eeA~~~ferAL~l 219 (224)
. .+++++|+.+|++|+++
T Consensus 194 ~-~~~~~~A~~~~~~al~~ 211 (378)
T 3q15_A 194 D-FKHYDKALPHLEAALEL 211 (378)
T ss_dssp H-TTCHHHHHHHHHHHHHH
T ss_pred H-hCCHHHHHHHHHHHHHH
Confidence 4 46788888888887775
No 195
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.47 E-value=2.2e-06 Score=77.37 Aligned_cols=86 Identities=8% Similarity=0.058 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC-hHHHHHH
Q 027404 136 SESMDVYYQEMIKAYPEDALVLANYAKFLKEIRG--DFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKD-APRAKSY 212 (224)
Q Consensus 136 ~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~G--d~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd-~eeA~~~ 212 (224)
++++..++.++|..+|.+..+|+.-++++. ..+ +++++++++.++++.+|.+..+|.+.+.++.. .++ +++++++
T Consensus 90 l~~EL~~~~~~L~~~PKny~aW~hR~wlL~-~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~-l~~~~~eel~~ 167 (331)
T 3dss_A 90 VKAELGFLESCLRVNPKSYGTWHHRCWLLS-RLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQ-AAVAPAEELAF 167 (331)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHh-ccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-hCcCHHHHHHH
Confidence 789999999999999999999999999886 577 48999999999999999999999998887765 456 6999999
Q ss_pred HHHHHHhCCCC
Q 027404 213 FDRAVHSAPDD 223 (224)
Q Consensus 213 ferAL~l~P~d 223 (224)
+++++..+|.|
T Consensus 168 ~~~~I~~~p~N 178 (331)
T 3dss_A 168 TDSLITRNFSN 178 (331)
T ss_dssp HHHHHHHCSCC
T ss_pred HHHHHHHCCCC
Confidence 99999999987
No 196
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.40 E-value=7.4e-07 Score=81.51 Aligned_cols=81 Identities=14% Similarity=0.113 Sum_probs=51.4
Q ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHc----CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH--HHcCChHH
Q 027404 135 ESESMDVYYQEMIKAYPEDALVLANYAKFLKEIR----GDFVKAEEYCGRAILAKPGDGNVLSMYGDLIW--INHKDAPR 208 (224)
Q Consensus 135 d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~----Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~--~~~gd~ee 208 (224)
++++|+.+|++|++.+|.++.+++++|.++. .. +++++|+.+|++|+ |+++.++.++|.+++ ...+++++
T Consensus 194 ~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~-~g~~~~~d~~~A~~~~~~aa---~g~~~a~~~Lg~~~~~~~~~~d~~~ 269 (452)
T 3e4b_A 194 QQAELLKQMEAGVSRGTVTAQRVDSVARVLG-DATLGTPDEKTAQALLEKIA---PGYPASWVSLAQLLYDFPELGDVEQ 269 (452)
T ss_dssp HHHHHHHHHHHHHHTTCSCHHHHHHHHHHHT-CGGGSSCCHHHHHHHHHHHG---GGSTHHHHHHHHHHHHSGGGCCHHH
T ss_pred cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh-CCCCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHhCCCCCCHHH
Confidence 6666777777777777776666666666553 12 46667777777666 666666666666533 23456666
Q ss_pred HHHHHHHHHHh
Q 027404 209 AKSYFDRAVHS 219 (224)
Q Consensus 209 A~~~ferAL~l 219 (224)
|+.+|++|++.
T Consensus 270 A~~~~~~Aa~~ 280 (452)
T 3e4b_A 270 MMKYLDNGRAA 280 (452)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHC
Confidence 66666666654
No 197
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.39 E-value=1.5e-06 Score=67.19 Aligned_cols=79 Identities=19% Similarity=0.172 Sum_probs=67.3
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH---cCChHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWIN---HKDAPRAK 210 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~---~gd~eeA~ 210 (224)
+++++|+.+|++|.+.....+. +|.++. .....++|+++|++|++. +++.+++++|.++..- .+++++|+
T Consensus 9 ~d~~~A~~~~~~aa~~g~~~a~----lg~~y~-~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~ 81 (138)
T 1klx_A 9 KDLKKAIQYYVKACELNEMFGC----LSLVSN-SQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAA 81 (138)
T ss_dssp HHHHHHHHHHHHHHHTTCTTHH----HHHHTC-TTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHH
T ss_pred cCHHHHHHHHHHHHcCCCHhhh----HHHHHH-cCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHH
Confidence 5889999999999999755544 887775 567889999999999987 7999999999887641 47899999
Q ss_pred HHHHHHHHh
Q 027404 211 SYFDRAVHS 219 (224)
Q Consensus 211 ~~ferAL~l 219 (224)
.+|++|.+.
T Consensus 82 ~~~~~Aa~~ 90 (138)
T 1klx_A 82 QYYSKACGL 90 (138)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHcC
Confidence 999999876
No 198
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.36 E-value=1.1e-06 Score=80.31 Aligned_cols=79 Identities=19% Similarity=0.277 Sum_probs=43.2
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH--HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH---cCChHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLK--EIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWIN---HKDAPR 208 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~--e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~---~gd~ee 208 (224)
+++++|+.+|++|+ |+++.+++++|.+++ ...+++++|+.+|++|++. +++.+++++|.++..- ..++++
T Consensus 231 ~d~~~A~~~~~~aa---~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~--g~~~A~~~Lg~~y~~G~g~~~d~~~ 305 (452)
T 3e4b_A 231 PDEKTAQALLEKIA---PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAA--DQPRAELLLGKLYYEGKWVPADAKA 305 (452)
T ss_dssp CCHHHHHHHHHHHG---GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHH
T ss_pred CCHHHHHHHHHHHc---CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHH
Confidence 45666666666665 666666666665532 2355666666666665543 3555555666544310 015556
Q ss_pred HHHHHHHHH
Q 027404 209 AKSYFDRAV 217 (224)
Q Consensus 209 A~~~ferAL 217 (224)
|+.+|++|.
T Consensus 306 A~~~~~~Aa 314 (452)
T 3e4b_A 306 AEAHFEKAV 314 (452)
T ss_dssp HHHHHHTTT
T ss_pred HHHHHHHHh
Confidence 666665554
No 199
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.32 E-value=1.8e-06 Score=63.65 Aligned_cols=55 Identities=11% Similarity=0.042 Sum_probs=50.9
Q ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 027404 135 ESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGN 190 (224)
Q Consensus 135 d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~ 190 (224)
..++|..++++||++||+++.+++.+|.+++ .+|+|++|+.+++++++.+|.++.
T Consensus 24 ~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~-~~g~y~~Ai~~w~~~l~~~p~~~~ 78 (93)
T 3bee_A 24 MTDEVSLLLEQALQLEPYNEAALSLIANDHF-ISFRFQEAIDTWVLLLDSNDPNLD 78 (93)
T ss_dssp CCHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTCCCTTCC
T ss_pred CCHHHHHHHHHHHHHCcCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhhCCCCcc
Confidence 4689999999999999999999999999988 699999999999999999998433
No 200
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.30 E-value=6.8e-06 Score=74.70 Aligned_cols=81 Identities=12% Similarity=0.085 Sum_probs=42.9
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH---cCCh
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEI----RGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWIN---HKDA 206 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~----~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~---~gd~ 206 (224)
+++++|+.+|++|++. +++.+++.+|.++. . .+++++|+++|++|++. +++.++..+|.++..- .+++
T Consensus 57 ~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~-~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~ 131 (490)
T 2xm6_A 57 KDLTQAMDWFRRAAEQ--GYTPAEYVLGLRYM-NGEGVPQDYAQAVIWYKKAALK--GLPQAQQNLGVMYHEGNGVKVDK 131 (490)
T ss_dssp CCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH-HTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCH
T ss_pred cCHHHHHHHHHHHHHC--CCHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCH
Confidence 4555566666665554 45555555555543 3 45555566555555543 3555555555544321 2355
Q ss_pred HHHHHHHHHHHHh
Q 027404 207 PRAKSYFDRAVHS 219 (224)
Q Consensus 207 eeA~~~ferAL~l 219 (224)
++|+.+|++|++.
T Consensus 132 ~~A~~~~~~a~~~ 144 (490)
T 2xm6_A 132 AESVKWFRLAAEQ 144 (490)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHC
Confidence 5555555555543
No 201
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.22 E-value=4.5e-06 Score=75.93 Aligned_cols=88 Identities=14% Similarity=0.052 Sum_probs=78.9
Q ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChH------
Q 027404 135 ESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRG-DFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAP------ 207 (224)
Q Consensus 135 d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~G-d~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~e------ 207 (224)
.+++++.++.++|..+|.+..+|+.-+.++....+ +++++++++.++|+.+|.+..+|.+.+.++... ++++
T Consensus 104 ~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l-~~~~~~~~~~ 182 (349)
T 3q7a_A 104 SLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHF-STLGRISEAQ 182 (349)
T ss_dssp CHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHHH-HHTTCCCHHH
T ss_pred hHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh-ccccccchhh
Confidence 68999999999999999999999999999874327 899999999999999999999999988777554 3466
Q ss_pred --HHHHHHHHHHHhCCCC
Q 027404 208 --RAKSYFDRAVHSAPDD 223 (224)
Q Consensus 208 --eA~~~ferAL~l~P~d 223 (224)
+++++++++++++|.|
T Consensus 183 ~~eELe~~~k~I~~dp~N 200 (349)
T 3q7a_A 183 WGSELDWCNEMLRVDGRN 200 (349)
T ss_dssp HHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHhCCCC
Confidence 9999999999999986
No 202
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.12 E-value=4.7e-06 Score=78.56 Aligned_cols=85 Identities=9% Similarity=0.008 Sum_probs=69.2
Q ss_pred CCCHHHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHHH---HHHH
Q 027404 133 GKESESMDVYYQEMIKA-----YPEDA---LVLANYAKFLKEIRGDFVKAEEYCGRAILA-----KPGDGNVL---SMYG 196 (224)
Q Consensus 133 ~~d~e~A~~~yerALe~-----dP~na---~~l~nlA~~l~e~~Gd~eeAe~~~erAL~l-----dP~da~al---~~lG 196 (224)
.|++++|+.+|++||++ -|+|| ..++|+|.++. .+|++++|+.+|++|+++ .|+|+.+. .+++
T Consensus 364 ~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~-~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~ 442 (490)
T 3n71_A 364 LQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNW-HAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRM 442 (490)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Confidence 38999999999999976 56666 67889999987 699999999999999974 78887754 4566
Q ss_pred HHHHHHcCChHHHHHHHHHHHHh
Q 027404 197 DLIWINHKDAPRAKSYFDRAVHS 219 (224)
Q Consensus 197 ~ll~~~~gd~eeA~~~ferAL~l 219 (224)
.++..+ +.+++|+..|++|.+.
T Consensus 443 ~~~~e~-~~~~~ae~~~~~~~~~ 464 (490)
T 3n71_A 443 QTEMEL-RMFRQNEFMYHKMREA 464 (490)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHH-HHHHHHHHHHHHHHHH
Confidence 665554 5699999999988753
No 203
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.09 E-value=1.8e-06 Score=76.47 Aligned_cols=84 Identities=12% Similarity=-0.158 Sum_probs=72.2
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHHcCChHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGD--GNVLSMYGDLIWINHKDAPRAKS 211 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~d--a~al~~lG~ll~~~~gd~eeA~~ 211 (224)
+++++|.+.|++++..+|++. +++.+|.+++ ..+++++|+.+|++++...+.. ..+++++|.++.. .|++++|+.
T Consensus 116 g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~-~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~-LG~~~eAl~ 192 (282)
T 4f3v_A 116 GNYADAMEALEAAPVAGSEHL-VAWMKAVVYG-AAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAAN-LALFTEAER 192 (282)
T ss_dssp TCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHH-HTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHH-TTCHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCchH-HHHHHHHHHH-HcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHH-CCCHHHHHH
Confidence 799999999999999999999 9999999887 6999999999999888753221 3578899988765 689999999
Q ss_pred HHHHHHHhC
Q 027404 212 YFDRAVHSA 220 (224)
Q Consensus 212 ~ferAL~l~ 220 (224)
+|++++...
T Consensus 193 ~l~~a~~g~ 201 (282)
T 4f3v_A 193 RLTEANDSP 201 (282)
T ss_dssp HHHHHHTST
T ss_pred HHHHHhcCC
Confidence 999998543
No 204
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.09 E-value=1.8e-05 Score=62.50 Aligned_cols=87 Identities=11% Similarity=0.003 Sum_probs=73.0
Q ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHH---HHHHHHHHHHHhC-C-CCHHHHHHHHHHHHHHcCChHHH
Q 027404 135 ESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFV---KAEEYCGRAILAK-P-GDGNVLSMYGDLIWINHKDAPRA 209 (224)
Q Consensus 135 d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~e---eAe~~~erAL~ld-P-~da~al~~lG~ll~~~~gd~eeA 209 (224)
....++..|++++..++....+.++||+++. ...+.. +++..++..+..+ | ...+.++.+|..++. .|+|.+|
T Consensus 16 ~l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv-~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yk-lg~Y~~A 93 (126)
T 1nzn_A 16 DLLKFEKKFQSEKAAGSVSKSTQFEYAWCLV-RTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYR-LKEYEKA 93 (126)
T ss_dssp HHHHHHHHHHHHHHHSCCCHHHHHHHHHHHT-TSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHH-TTCHHHH
T ss_pred HHHHHHHHHHHHhccCCCcHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHH-hhhHHHH
Confidence 4567889999999999999999999999986 344444 5999999999887 5 456678888887766 5799999
Q ss_pred HHHHHHHHHhCCCC
Q 027404 210 KSYFDRAVHSAPDD 223 (224)
Q Consensus 210 ~~~ferAL~l~P~d 223 (224)
..+++..|++.|++
T Consensus 94 ~~~~~~lL~~eP~n 107 (126)
T 1nzn_A 94 LKYVRGLLQTEPQN 107 (126)
T ss_dssp HHHHHHHHHHCTTC
T ss_pred HHHHHHHHHhCCCC
Confidence 99999999999986
No 205
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.08 E-value=7.3e-06 Score=66.67 Aligned_cols=62 Identities=13% Similarity=0.054 Sum_probs=56.5
Q ss_pred CCHHHHHHHHHHHHHHC-C-CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAY-P-EDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYG 196 (224)
Q Consensus 134 ~d~e~A~~~yerALe~d-P-~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG 196 (224)
.++++++.+++..++.+ | ++.+++|++|..++ +.++|++|.+|++++|+++|++.++....-
T Consensus 49 ~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~-kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk~ 112 (152)
T 1pc2_A 49 DDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNY-RLKEYEKALKYVRGLLQTEPQNNQAKELER 112 (152)
T ss_dssp HHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHH-HTSCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHH-HccCHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 47889999999999999 8 67899999999998 799999999999999999999999986543
No 206
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.91 E-value=8.3e-06 Score=73.05 Aligned_cols=56 Identities=16% Similarity=0.141 Sum_probs=51.0
Q ss_pred CCCHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 027404 133 GKESESMDVYYQEMIKAYPED-ALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGD 188 (224)
Q Consensus 133 ~~d~e~A~~~yerALe~dP~n-a~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~d 188 (224)
.|+.++|+.+|+|||+++|+. ..+++.||.+++..+||+++|.+++++|++++|..
T Consensus 217 gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 217 GGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRAGFDEALDRALAIDPES 273 (301)
T ss_dssp TCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGGG
T ss_pred CCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCC
Confidence 479999999999999999985 99999999998743599999999999999998873
No 207
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.90 E-value=5.8e-05 Score=73.91 Aligned_cols=82 Identities=9% Similarity=0.052 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHH-HHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHHH
Q 027404 136 SESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAE-EYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFD 214 (224)
Q Consensus 136 ~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe-~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~fe 214 (224)
.++....|++||...|.++.+|+.||.++. ..|+.++|. ..|++|+...|.....|..|+.+... .+++++|...|+
T Consensus 325 ~~Rv~~~Ye~aL~~~p~~~~lW~~ya~~~~-~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~-~~~~e~aR~iye 402 (679)
T 4e6h_A 325 KARMTYVYMQAAQHVCFAPEIWFNMANYQG-EKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYEL-NTKIPEIETTIL 402 (679)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHH-HHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHH-hcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-hCCHHHHHHHHH
Confidence 456778999999999999999999999886 689988997 99999999999999999888877654 678999999999
Q ss_pred HHHHh
Q 027404 215 RAVHS 219 (224)
Q Consensus 215 rAL~l 219 (224)
+++..
T Consensus 403 k~l~~ 407 (679)
T 4e6h_A 403 SCIDR 407 (679)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99974
No 208
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.76 E-value=4.4e-05 Score=68.40 Aligned_cols=83 Identities=14% Similarity=0.142 Sum_probs=68.8
Q ss_pred CCHHHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----------CCCCHHHHHHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPE--DALVLANYAKFLKEIRGDFVKAEEYCGRAILA----------KPGDGNVLSMYGDLIWI 201 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~--na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~l----------dP~da~al~~lG~ll~~ 201 (224)
+++..|...|+++.+..|+ .+..+++ ++. .+|++++|++.++++++. +|+|+.++.++..+...
T Consensus 192 ~~~q~A~~~f~El~~~~p~~~~~~lLln---~~~-~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~l~~~ 267 (310)
T 3mv2_B 192 ETATSNFYYYEELSQTFPTWKTQLGLLN---LHL-QQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLANQITLALM 267 (310)
T ss_dssp STTTHHHHHHHHHHTTSCSHHHHHHHHH---HHH-HHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCCcccHHHHHH---HHH-HcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHH
Confidence 3678999999999888887 4566666 343 689999999999988776 59999999888776665
Q ss_pred HcCChHHHHHHHHHHHHhCCCC
Q 027404 202 NHKDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 202 ~~gd~eeA~~~ferAL~l~P~d 223 (224)
+ |+ +|.++++++.+++|++
T Consensus 268 l-gk--~a~~l~~qL~~~~P~h 286 (310)
T 3mv2_B 268 Q-GL--DTEDLTNQLVKLDHEH 286 (310)
T ss_dssp T-TC--TTHHHHHHHHHTTCCC
T ss_pred h-Ch--HHHHHHHHHHHhCCCC
Confidence 4 55 8999999999999986
No 209
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.73 E-value=7.9e-05 Score=65.10 Aligned_cols=87 Identities=9% Similarity=0.048 Sum_probs=71.7
Q ss_pred CCCHHHHHHHHHHHHHHCCC------CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHH
Q 027404 133 GKESESMDVYYQEMIKAYPE------DALVLANYAKFLKEIRGDFVKAEEYCGRAILA------KPGDGNVLSMYGDLIW 200 (224)
Q Consensus 133 ~~d~e~A~~~yerALe~dP~------na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~l------dP~da~al~~lG~ll~ 200 (224)
.+++++|+.+|++++...+. -+.++.++|.++. .+|++++|+.++++++.. .|....++..++.++.
T Consensus 108 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (434)
T 4b4t_Q 108 PDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHY-QKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYH 186 (434)
T ss_dssp CSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHH-HccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHH
Confidence 36889999999999986433 2578899999987 699999999999999876 3445668888888876
Q ss_pred HHcCChHHHHHHHHHHHHhCC
Q 027404 201 INHKDAPRAKSYFDRAVHSAP 221 (224)
Q Consensus 201 ~~~gd~eeA~~~ferAL~l~P 221 (224)
. .+++++|..+|++|+.+.+
T Consensus 187 ~-~~~~~~A~~~~~~al~~~~ 206 (434)
T 4b4t_Q 187 K-LRNLAKSKASLTAARTAAN 206 (434)
T ss_dssp H-TTCHHHHHHHHHHHHHHHH
T ss_pred H-hCcHHHHHHHHHHHHHHhh
Confidence 5 5799999999999998754
No 210
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.65 E-value=0.00016 Score=70.84 Aligned_cols=88 Identities=10% Similarity=0.052 Sum_probs=65.0
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---CHHHHHHHHHHHHHHcCChHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPG---DGNVLSMYGDLIWINHKDAPRAK 210 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~---da~al~~lG~ll~~~~gd~eeA~ 210 (224)
++.+.|...|+++|+..|+++.+|..|+.+.. ..|+.+.|...|++|+...|+ ...+|..+..+- ...|+.+.+.
T Consensus 484 ~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~-~~~~~~~AR~lferal~~~~~~~~~~~lw~~~~~fE-~~~G~~~~~~ 561 (679)
T 4e6h_A 484 KDTKTACKVLELGLKYFATDGEYINKYLDFLI-YVNEESQVKSLFESSIDKISDSHLLKMIFQKVIFFE-SKVGSLNSVR 561 (679)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHTTTSSSTTHHHHHHHHHHHHH-HHTCCSHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCchHHHHHHHHHHH-hCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-HHcCCHHHHH
Confidence 45678888888888888888888888887765 578888888888888887773 344555555433 3457788888
Q ss_pred HHHHHHHHhCCCC
Q 027404 211 SYFDRAVHSAPDD 223 (224)
Q Consensus 211 ~~ferAL~l~P~d 223 (224)
..++++++..|++
T Consensus 562 ~v~~R~~~~~P~~ 574 (679)
T 4e6h_A 562 TLEKRFFEKFPEV 574 (679)
T ss_dssp HHHHHHHHHSTTC
T ss_pred HHHHHHHHhCCCC
Confidence 8888888888864
No 211
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.59 E-value=0.00021 Score=75.43 Aligned_cols=65 Identities=15% Similarity=0.038 Sum_probs=57.8
Q ss_pred CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC
Q 027404 151 PEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPD 222 (224)
Q Consensus 151 P~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~ferAL~l~P~ 222 (224)
.+.+.+|++||.++. ..|++++|+.+|.+| +|+.+|...+.++.. .|++++|+++|..|++..++
T Consensus 1102 vn~p~vWsqLAKAql-~~G~~kEAIdsYiKA-----dD~say~eVa~~~~~-lGkyEEAIeyL~mArk~~~e 1166 (1630)
T 1xi4_A 1102 CNEPAVWSQLAKAQL-QKGMVKEAIDSYIKA-----DDPSSYMEVVQAANT-SGNWEELVKYLQMARKKARE 1166 (1630)
T ss_pred cCCHHHHHHHHHHHH-hCCCHHHHHHHHHhc-----CChHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhccc
Confidence 578999999999986 799999999999887 889999999988755 68999999999999988754
No 212
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.56 E-value=0.00018 Score=64.38 Aligned_cols=81 Identities=19% Similarity=0.207 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHHcCChHHHHHHHHHH
Q 027404 139 MDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKP--GDGNVLSMYGDLIWINHKDAPRAKSYFDRA 216 (224)
Q Consensus 139 A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP--~da~al~~lG~ll~~~~gd~eeA~~~ferA 216 (224)
|+.+|++.++..+.+..++..+|.++. ..|++++|+++|.+.|..+| ++.+++..++.++.. .++++.|...++++
T Consensus 85 a~~~l~~l~~~~~~~~~~~~~la~i~~-~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~-~~r~d~A~k~l~~~ 162 (310)
T 3mv2_B 85 NIEELENLLKDKQNSPYELYLLATAQA-ILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALL-NNNVSTASTIFDNY 162 (310)
T ss_dssp CCHHHHHTTTTSCCCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCcHHHHHHHHHHH-HcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHH-CCCHHHHHHHHHHH
Confidence 677888888887777777889998887 68999999999999999997 788888888877765 67899999999999
Q ss_pred HHhCC
Q 027404 217 VHSAP 221 (224)
Q Consensus 217 L~l~P 221 (224)
.+.+|
T Consensus 163 ~~~~~ 167 (310)
T 3mv2_B 163 TNAIE 167 (310)
T ss_dssp HHHSC
T ss_pred HhcCc
Confidence 99988
No 213
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=97.52 E-value=0.00027 Score=64.92 Aligned_cols=57 Identities=14% Similarity=0.073 Sum_probs=51.1
Q ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 027404 133 GKESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNV 191 (224)
Q Consensus 133 ~~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~a 191 (224)
.+++++|+.++++|+++|| +..++..+|.++. ..|++++|+++|++|+.++|.+...
T Consensus 290 ~gd~d~A~~~l~rAl~Ln~-s~~a~~llG~~~~-~~G~~~eA~e~~~~AlrL~P~~~t~ 346 (372)
T 3ly7_A 290 KGKTDESYQAINTGIDLEM-SWLNYVLLGKVYE-MKGMNREAADAYLTAFNLRPGANTL 346 (372)
T ss_dssp HTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSCSHHHH
T ss_pred CCCHHHHHHHHHHHHhcCC-CHHHHHHHHHHHH-HCCCHHHHHHHHHHHHhcCCCcChH
Confidence 3899999999999999997 4788888898876 7999999999999999999988643
No 214
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.41 E-value=0.00036 Score=64.65 Aligned_cols=60 Identities=13% Similarity=0.048 Sum_probs=51.3
Q ss_pred CCHHHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHHHHH
Q 027404 134 KESESMDVYYQEMIKA-----YPEDA---LVLANYAKFLKEIRGDFVKAEEYCGRAILA-----KPGDGNVLSM 194 (224)
Q Consensus 134 ~d~e~A~~~yerALe~-----dP~na---~~l~nlA~~l~e~~Gd~eeAe~~~erAL~l-----dP~da~al~~ 194 (224)
|++++|+.+|++||++ -|++| ..++|+|.++. .+|++++|+.+|+||+++ .|+|+.+...
T Consensus 354 g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~-~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~l 426 (433)
T 3qww_A 354 QDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYM-GLENKAAGEKALKKAIAIMEVAHGKDHPYISEI 426 (433)
T ss_dssp TCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHH-hccCHHHHHHHHHHHHHHHHHHcCCCChHHHHH
Confidence 8999999999999976 56665 67889999987 699999999999999975 7888877543
No 215
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.40 E-value=0.0004 Score=60.60 Aligned_cols=84 Identities=20% Similarity=0.118 Sum_probs=66.1
Q ss_pred CCHHHHHHHHHHHHHH------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---CC----HHHHHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKA------YPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKP---GD----GNVLSMYGDLIW 200 (224)
Q Consensus 134 ~d~e~A~~~yerALe~------dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP---~d----a~al~~lG~ll~ 200 (224)
+++++|..++++++.. .|...+++.+++.++. ..|++++|..+|++|+.+.+ ++ +..+..+|.++
T Consensus 149 g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~g~~~- 226 (434)
T 4b4t_Q 149 KQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYH-KLRNLAKSKASLTAARTAANSIYCPTQTVAELDLMSGILH- 226 (434)
T ss_dssp TCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHT-
T ss_pred cChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHH-
Confidence 6899999999999876 3444689999999887 69999999999999998754 23 23344555544
Q ss_pred HHcCChHHHHHHHHHHHHh
Q 027404 201 INHKDAPRAKSYFDRAVHS 219 (224)
Q Consensus 201 ~~~gd~eeA~~~ferAL~l 219 (224)
...+++++|..+|.+++..
T Consensus 227 ~~~~~y~~A~~~~~~a~~~ 245 (434)
T 4b4t_Q 227 CEDKDYKTAFSYFFESFES 245 (434)
T ss_dssp TSSSCHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHH
Confidence 3458899999999999864
No 216
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=97.35 E-value=0.0028 Score=55.98 Aligned_cols=90 Identities=22% Similarity=0.186 Sum_probs=75.9
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH------------
Q 027404 132 SGKESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLI------------ 199 (224)
Q Consensus 132 ~~~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll------------ 199 (224)
..+.+++|+...+..|+.+|.|+.....|..+|+ ..|++++|.+.++.+.+++|+.......|..++
T Consensus 9 ~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLc-v~G~w~RA~~QL~~~a~l~p~~~~~a~~yr~lI~aE~~R~~vfaG 87 (273)
T 1zbp_A 9 SEGQLQQALELLIEAIKASPKDASLRSSFIELLC-IDGDFERADEQLMQSIKLFPEYLPGASQLRHLVKAAQARKDFAQG 87 (273)
T ss_dssp TTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred hCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHhCchhhHHHHHHHHHHHHHHHHHHHHcC
Confidence 3478999999999999999999999999999998 799999999999999999999876654443321
Q ss_pred ----------------------HHHcCChHHHHHHHHHHHHhCCC
Q 027404 200 ----------------------WINHKDAPRAKSYFDRAVHSAPD 222 (224)
Q Consensus 200 ----------------------~~~~gd~eeA~~~ferAL~l~P~ 222 (224)
....|+.++|.+.-.+|+...|.
T Consensus 88 ~~~P~~~g~~~~w~~~ll~Al~~~~~G~~~~A~~lr~~A~e~ap~ 132 (273)
T 1zbp_A 88 AATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQE 132 (273)
T ss_dssp CCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHhcCcc
Confidence 11247899999999999988775
No 217
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.25 E-value=0.00071 Score=62.39 Aligned_cols=60 Identities=12% Similarity=0.016 Sum_probs=51.1
Q ss_pred CCHHHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHHHHH
Q 027404 134 KESESMDVYYQEMIKA-----YPEDA---LVLANYAKFLKEIRGDFVKAEEYCGRAILA-----KPGDGNVLSM 194 (224)
Q Consensus 134 ~d~e~A~~~yerALe~-----dP~na---~~l~nlA~~l~e~~Gd~eeAe~~~erAL~l-----dP~da~al~~ 194 (224)
|++++|+.+|+++|++ -|++| ..++|+|.++. .+|++++|+.+|++|+++ .|+|+.+...
T Consensus 343 g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~-~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~ 415 (429)
T 3qwp_A 343 GLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQL-HQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDL 415 (429)
T ss_dssp TCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHH
T ss_pred ccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHH
Confidence 7999999999999976 56666 57889999987 699999999999999974 7888876543
No 218
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=97.23 E-value=0.0023 Score=59.69 Aligned_cols=60 Identities=18% Similarity=0.154 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 027404 136 SESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGD 197 (224)
Q Consensus 136 ~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ 197 (224)
.+++...|++||...|.++.+|..|+.++. .+|+.++|...|+||+.. |.+...+..|+.
T Consensus 195 ~~Rv~~~ye~al~~~p~~~~lW~~ya~~~~-~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~ 254 (493)
T 2uy1_A 195 ESRMHFIHNYILDSFYYAEEVYFFYSEYLI-GIGQKEKAKKVVERGIEM-SDGMFLSLYYGL 254 (493)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHH-CCSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhC-CCcHHHHHHHHh
Confidence 466788999999999999999999999886 699999999999999999 998766655544
No 219
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.18 E-value=0.0011 Score=53.32 Aligned_cols=87 Identities=13% Similarity=-0.047 Sum_probs=63.3
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHcCChHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRG---DFVKAEEYCGRAILAKPG-DGNVLSMYGDLIWINHKDAPRA 209 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~G---d~eeAe~~~erAL~ldP~-da~al~~lG~ll~~~~gd~eeA 209 (224)
.++...+.-|++-+. +.-.+.+.++||+++.. .. +..+++..++..+...|. ..+.++.+|..++. .++|.+|
T Consensus 20 eeL~~lr~qY~~E~~-~~vs~~t~F~YAw~Lv~-S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~yk-l~~Y~~A 96 (144)
T 1y8m_A 20 QQLEILRQQVVSEGG-PTATIQSRFNYAWGLIK-STDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYK-LGEYSMA 96 (144)
T ss_dssp HHHHHHHHHHHHTTS-TTSCHHHHHHHHHHHHH-SSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHT-TTCHHHH
T ss_pred HHHHHHHHHHHHhcc-CCCcHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHH-hhhHHHH
Confidence 345555555555422 35678999999988863 33 445899999999998885 44566667766665 5789999
Q ss_pred HHHHHHHHHhCCCC
Q 027404 210 KSYFDRAVHSAPDD 223 (224)
Q Consensus 210 ~~~ferAL~l~P~d 223 (224)
..+.+..|++.|++
T Consensus 97 r~y~d~lL~~eP~n 110 (144)
T 1y8m_A 97 KRYVDTLFEHERNN 110 (144)
T ss_dssp HHHHHHHHHTCCCC
T ss_pred HHHHHHHHhcCCCc
Confidence 99999999999976
No 220
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.09 E-value=0.0014 Score=52.12 Aligned_cols=86 Identities=13% Similarity=-0.052 Sum_probs=55.5
Q ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHcCChHHHH
Q 027404 135 ESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRG---DFVKAEEYCGRAILAKPG-DGNVLSMYGDLIWINHKDAPRAK 210 (224)
Q Consensus 135 d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~G---d~eeAe~~~erAL~ldP~-da~al~~lG~ll~~~~gd~eeA~ 210 (224)
++...++-|++-+ ...-.+.+.++||+++.. .. +..+++..++..++.+|. ..+.++.+|..++.+ |+|++|.
T Consensus 22 eL~~l~~qy~~E~-~~~vs~qt~F~yAw~Lv~-S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~ykl-gdY~~Ar 98 (134)
T 3o48_A 22 QLEILRQQVVSEG-GPTATIQSRFNYAWGLIK-STDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKL-GEYSMAK 98 (134)
T ss_dssp HHHHHHHHHHHTT-GGGSCHHHHHHHHHHHHH-SSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHH-TCHHHHH
T ss_pred HHHHHHHHHHHHh-CCCCChhhHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHh-hhHHHHH
Confidence 3444444454433 223356788888877763 33 344788888888877774 355666677666554 6788888
Q ss_pred HHHHHHHHhCCCC
Q 027404 211 SYFDRAVHSAPDD 223 (224)
Q Consensus 211 ~~ferAL~l~P~d 223 (224)
.+.+..+++.|++
T Consensus 99 ~y~d~lL~~eP~N 111 (134)
T 3o48_A 99 RYVDTLFEHERNN 111 (134)
T ss_dssp HHHHHHHTTCTTC
T ss_pred HHHHHHHhhCCCC
Confidence 8888888888875
No 221
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.05 E-value=0.00098 Score=52.47 Aligned_cols=62 Identities=13% Similarity=0.054 Sum_probs=54.1
Q ss_pred CCHHHHHHHHHHHHHHC-C-CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAY-P-EDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYG 196 (224)
Q Consensus 134 ~d~e~A~~~yerALe~d-P-~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG 196 (224)
.+..+++.+++..+..+ | ..-+.++.+|..++ +.|+|.+|.+|++.+|++.|++.+|.....
T Consensus 52 ~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~y-klg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~ 115 (126)
T 1nzn_A 52 DDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNY-RLKEYEKALKYVRGLLQTEPQNNQAKELER 115 (126)
T ss_dssp HHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 45667999999999987 6 56689999999998 799999999999999999999999986543
No 222
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=96.94 E-value=0.0043 Score=50.72 Aligned_cols=84 Identities=15% Similarity=0.128 Sum_probs=71.2
Q ss_pred HHHHHHHHHHHHHHCCC--------CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChH
Q 027404 136 SESMDVYYQEMIKAYPE--------DALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAP 207 (224)
Q Consensus 136 ~e~A~~~yerALe~dP~--------na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~e 207 (224)
.++-.+.|++|+..-|- ....|..||.+. ..+|.++|.+.|+.|+.+....+.+|..+|.+-.. +++..
T Consensus 35 l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~~--ei~D~d~aR~vy~~a~~~hKkFAKiwi~~AqFEiR-qgnl~ 111 (161)
T 4h7y_A 35 LNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAELK--AIQEPDDARDYFQMARANCKKFAFVHISFAQFELS-QGNVK 111 (161)
T ss_dssp HHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHHH--HHHCGGGCHHHHHHHHHHCTTBHHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHHH--HhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cccHH
Confidence 36777899999998775 357888899763 36899999999999999988999999999987654 68899
Q ss_pred HHHHHHHHHHHhCCC
Q 027404 208 RAKSYFDRAVHSAPD 222 (224)
Q Consensus 208 eA~~~ferAL~l~P~ 222 (224)
.|...+.+|+-+.|.
T Consensus 112 kARkILg~AiG~~~k 126 (161)
T 4h7y_A 112 KSKQLLQKAVERGAV 126 (161)
T ss_dssp HHHHHHHHHHHTTCB
T ss_pred HHHHHHHHHhccCCC
Confidence 999999999998884
No 223
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=96.89 E-value=0.0041 Score=51.21 Aligned_cols=80 Identities=14% Similarity=0.082 Sum_probs=62.9
Q ss_pred CCHHHHHHHHHHHHHHCCCCH---------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-------------------
Q 027404 134 KESESMDVYYQEMIKAYPEDA---------LVLANYAKFLKEIRGDFVKAEEYCGRAILAK------------------- 185 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na---------~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ld------------------- 185 (224)
+.|+.|+..+..++.+..+++ .++..+|.+++ .+++|.+|+.+|++||.+.
T Consensus 34 ~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf-~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~ 112 (167)
T 3ffl_A 34 GLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLF-HDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSAST 112 (167)
T ss_dssp TCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHCC----------------
T ss_pred hhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHH-cccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCC
Confidence 689999999998777644433 48889999998 5999999999999997531
Q ss_pred ------CCCHHHHHHHHHHHHHHcCChHHHHHHHHH
Q 027404 186 ------PGDGNVLSMYGDLIWINHKDAPRAKSYFDR 215 (224)
Q Consensus 186 ------P~da~al~~lG~ll~~~~gd~eeA~~~fer 215 (224)
+.+.++.+.++.++..+ +++++|+..++.
T Consensus 113 p~s~~~~~e~Elkykia~C~~~l-~~~~~Ai~~Le~ 147 (167)
T 3ffl_A 113 PQSQCLPSEIEVKYKLAECYTVL-KQDKDAIAILDG 147 (167)
T ss_dssp ----CCCCHHHHHHHHHHHHHHT-TCHHHHHHHHHT
T ss_pred cccccccchHHHHHHHHHHHHHH-CCHHHHHHHHhc
Confidence 12236778888888775 689999999874
No 224
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.79 E-value=0.0029 Score=67.04 Aligned_cols=81 Identities=11% Similarity=0.085 Sum_probs=54.6
Q ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-------------------------C
Q 027404 133 GKESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKP-------------------------G 187 (224)
Q Consensus 133 ~~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP-------------------------~ 187 (224)
.+++++|..+|.+| ..|..+|.++. ..|++++|++++++|...++ .
T Consensus 1208 eg~YeeA~~~Y~kA--------~ny~rLA~tLv-kLge~q~AIEaarKA~n~~aWkev~~acve~~Ef~LA~~cgl~Iiv 1278 (1630)
T 1xi4_A 1208 EKMYDAAKLLYNNV--------SNFGRLASTLV-HLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQMCGLHIVV 1278 (1630)
T ss_pred cCCHHHHHHHHHhh--------hHHHHHHHHHH-HhCCHHHHHHHHHHhCCHHHHHHHHHHHhhhhHHHHHHHHHHhhhc
Confidence 36778888888876 36667777766 57788888888877744333 1
Q ss_pred CHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC
Q 027404 188 DGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 188 da~al~~lG~ll~~~~gd~eeA~~~ferAL~l~P~d 223 (224)
+++.+..++..| ...|.|++|+.+|++++.++|.+
T Consensus 1279 ~~deLeeli~yY-e~~G~feEAI~LlE~aL~LeraH 1313 (1630)
T 1xi4_A 1279 HADELEELINYY-QDRGYFEELITMLEAALGLERAH 1313 (1630)
T ss_pred CHHHHHHHHHHH-HHcCCHHHHHHHHHHHhccChhH
Confidence 233333444433 44688999999999998888754
No 225
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=96.76 E-value=0.0041 Score=49.47 Aligned_cols=62 Identities=10% Similarity=0.024 Sum_probs=55.2
Q ss_pred CCHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPED-ALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYG 196 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~n-a~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG 196 (224)
.+..+++..++..++.+|.. -+.++.+|..++ +.|+|++|.+|.++++++.|++.+|.....
T Consensus 57 ~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~y-klgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~ 119 (134)
T 3o48_A 57 NDERLGVKILTDIYKEAESRRRECLYYLTIGCY-KLGEYSMAKRYVDTLFEHERNNKQVGALKS 119 (134)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHTTCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHH-HhhhHHHHHHHHHHHHhhCCCCHHHHHHHH
Confidence 46779999999999999954 689999999888 799999999999999999999999986543
No 226
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=96.74 E-value=0.011 Score=54.88 Aligned_cols=87 Identities=8% Similarity=0.049 Sum_probs=66.0
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHH----------------------------------------HHHHcCCHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKF----------------------------------------LKEIRGDFVK 173 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~----------------------------------------l~e~~Gd~ee 173 (224)
++.++|...|++|+.. |.+..++..|+.+ .. +.++.++
T Consensus 227 ~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~~~~~-r~~~~~~ 304 (493)
T 2uy1_A 227 GQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRINHLNYVL-KKRGLEL 304 (493)
T ss_dssp TCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHHHHHHHH-HHHCHHH
T ss_pred CCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHHHHHHHH-HcCCHHH
Confidence 5789999999999999 9987666655543 21 3567889
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC
Q 027404 174 AEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 174 Ae~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~ferAL~l~P~d 223 (224)
|...|++| ...+....+|..++.+-+...++++.|...|+++++..|++
T Consensus 305 AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~ 353 (493)
T 2uy1_A 305 FRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDS 353 (493)
T ss_dssp HHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCC
Confidence 99999999 43333566776667665555567999999999999987764
No 227
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=96.73 E-value=0.0061 Score=49.04 Aligned_cols=62 Identities=10% Similarity=0.024 Sum_probs=55.1
Q ss_pred CCHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPED-ALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYG 196 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~n-a~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG 196 (224)
.+..+++.+++..+..+|.+ -+.++.+|..++ +.|+|.+|.+|.+++|++.|++.+|.....
T Consensus 56 ~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~y-kl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~ 118 (144)
T 1y8m_A 56 NDERLGVKILTDIYKEAESRRRECLYYLTIGCY-KLGEYSMAKRYVDTLFEHERNNKQVGALKS 118 (144)
T ss_dssp HHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHTCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCccchhHHHHHHHHHHH-HhhhHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 56789999999999999954 589999999888 799999999999999999999999976543
No 228
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=96.57 E-value=0.0088 Score=56.10 Aligned_cols=79 Identities=8% Similarity=-0.066 Sum_probs=43.5
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~f 213 (224)
+++++|+++|++| +++.+|.....++. ..|+++.|..+... |...|++ +..+..++ ...|++++|+.+|
T Consensus 162 g~yq~AVea~~KA-----~~~~~Wk~v~~aCv-~~~ef~lA~~~~l~-L~~~ad~---l~~lv~~Y-ek~G~~eEai~lL 230 (449)
T 1b89_A 162 GEYQAAVDGARKA-----NSTRTWKEVCFACV-DGKEFRLAQMCGLH-IVVHADE---LEELINYY-QDRGYFEELITML 230 (449)
T ss_dssp TCHHHHHHHHHHH-----TCHHHHHHHHHHHH-HTTCHHHHHHTTTT-TTTCHHH---HHHHHHHH-HHTTCHHHHHHHH
T ss_pred ccHHHHHHHHHHc-----CCchhHHHHHHHHH-HcCcHHHHHHHHHH-HHhCHhh---HHHHHHHH-HHCCCHHHHHHHH
Confidence 4455555555555 34455554444443 34555555444443 2233322 22333444 4568899999999
Q ss_pred HHHHHhCCCC
Q 027404 214 DRAVHSAPDD 223 (224)
Q Consensus 214 erAL~l~P~d 223 (224)
++++.+++.+
T Consensus 231 e~aL~le~ah 240 (449)
T 1b89_A 231 EAALGLERAH 240 (449)
T ss_dssp HHHTTSTTCC
T ss_pred HHHhCCcHHH
Confidence 9999988653
No 229
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=96.14 E-value=0.00088 Score=62.91 Aligned_cols=75 Identities=12% Similarity=0.004 Sum_probs=0.0
Q ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHH
Q 027404 133 GKESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSY 212 (224)
Q Consensus 133 ~~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~ 212 (224)
.+++++|..++++. +++.+|..+|.++. ..|++++|+.+|.++ .|+..+...+..+.. .|++++|+.|
T Consensus 16 ~~~ld~A~~fae~~-----~~~~vWs~La~A~l-~~g~~~eAIdsfika-----~D~~~y~~V~~~ae~-~g~~EeAi~y 83 (449)
T 1b89_A 16 IGNLDRAYEFAERC-----NEPAVWSQLAKAQL-QKGMVKEAIDSYIKA-----DDPSSYMEVVQAANT-SGNWEELVKY 83 (449)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCHHHHHHHHHhC-----CChHHHHHHHHHHH-HcCCHHHHHHHHHcC-----CCHHHHHHHHHHHHh-CCCHHHHHHH
Confidence 46788999999998 45679999999887 689999999999775 455677777766544 5789999999
Q ss_pred HHHHHHh
Q 027404 213 FDRAVHS 219 (224)
Q Consensus 213 ferAL~l 219 (224)
++.+++.
T Consensus 84 l~~ark~ 90 (449)
T 1b89_A 84 LQMARKK 90 (449)
T ss_dssp -------
T ss_pred HHHHHHh
Confidence 9998864
No 230
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=95.95 E-value=0.022 Score=53.92 Aligned_cols=66 Identities=15% Similarity=0.193 Sum_probs=58.3
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIW 200 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~ 200 (224)
..+..|..+|++|+.++|++...++.+|.+.. .+++.-+|+-||-|++....-++.+..++..++-
T Consensus 166 ~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~-~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~ 231 (497)
T 1ya0_A 166 NQTSQAESYYRHAAQLVPSNGQPYNQLAILAS-SKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALS 231 (497)
T ss_dssp TCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHH-HTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCchHHHHHHHHh-cccccHHHHHHHHHHHhcCCCChhHHHHHHHHHH
Confidence 45789999999999999999999999998776 6899999999999999888778999888876654
No 231
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=95.83 E-value=0.016 Score=47.42 Aligned_cols=59 Identities=19% Similarity=0.235 Sum_probs=54.3
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLS 193 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~ 193 (224)
++.++|...|+.|+.++...+-+|..+|.|-. ++|+..+|.+.+.+||...|.+.+.+.
T Consensus 74 ~D~d~aR~vy~~a~~~hKkFAKiwi~~AqFEi-Rqgnl~kARkILg~AiG~~~k~~~~le 132 (161)
T 4h7y_A 74 QEPDDARDYFQMARANCKKFAFVHISFAQFEL-SQGNVKKSKQLLQKAVERGAVPLEMLE 132 (161)
T ss_dssp HCGGGCHHHHHHHHHHCTTBHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTTCBCHHHHH
T ss_pred cCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH-HcccHHHHHHHHHHHhccCCCcHHHHH
Confidence 57789999999999998889999999999976 799999999999999999999988764
No 232
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=94.92 E-value=0.29 Score=44.06 Aligned_cols=57 Identities=9% Similarity=-0.020 Sum_probs=46.8
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Q 027404 160 YAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVH 218 (224)
Q Consensus 160 lA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~ferAL~ 218 (224)
++.++. ..|++.+|+..+++++..+|-+-.++..+-.+++. .|+..+|+..|+++.+
T Consensus 177 ~~~~~l-~~g~~~~a~~~l~~~~~~~P~~E~~~~~lm~al~~-~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 177 KAEAEI-ACGRASAVIAELEALTFEHPYREPLWTQLITAYYL-SDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHT-TTCHHHHHHHHHHHHH
T ss_pred HHHHHH-HCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 444444 58999999999999999999999888877666654 6899999999998754
No 233
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=94.44 E-value=0.12 Score=51.25 Aligned_cols=58 Identities=14% Similarity=-0.000 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHHH
Q 027404 155 LVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFD 214 (224)
Q Consensus 155 ~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~fe 214 (224)
..+...+.||. .+|+++-|+++.++|+...|.+-..|+.|+.+|.. .++|+.|+-.+.
T Consensus 338 ~LL~~Qa~FLl-~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~-l~d~e~ALLtLN 395 (754)
T 4gns_B 338 DLLNIQTNFLL-NRGDYELALGVSNTSTELALDSFESWYNLARCHIK-KEEYEKALFAIN 395 (754)
T ss_dssp HHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHh-ccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHH-hccHHHHHHHHh
Confidence 45666788887 68999999999999999999999999999999877 579999986654
No 234
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=94.22 E-value=0.15 Score=48.17 Aligned_cols=62 Identities=19% Similarity=0.251 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHHHHHHHh
Q 027404 156 VLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHS 219 (224)
Q Consensus 156 ~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~ferAL~l 219 (224)
.+..+|.+.. ....+..|+.||.+|+.++|++...++.+|.+... .++.-+|+-+|-|++..
T Consensus 154 ~l~~LGDL~R-Y~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~-~~~~l~a~y~y~rsl~~ 215 (497)
T 1ya0_A 154 CLVHLGDIAR-YRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASS-KGDHLTTIFYYCRSIAV 215 (497)
T ss_dssp HHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHH-TTCHHHHHHHHHHHHSS
T ss_pred HHHHcccHHH-HHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhc-ccccHHHHHHHHHHHhc
Confidence 4556676654 57788999999999999999999999999976544 67888999999999864
No 235
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=93.91 E-value=0.097 Score=42.95 Aligned_cols=61 Identities=11% Similarity=0.120 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---------HHHHHHHHHHHHHcCChHHHHHHHHHHHHh
Q 027404 157 LANYAKFLKEIRGDFVKAEEYCGRAILAKPGDG---------NVLSMYGDLIWINHKDAPRAKSYFDRAVHS 219 (224)
Q Consensus 157 l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da---------~al~~lG~ll~~~~gd~eeA~~~ferAL~l 219 (224)
++.-...++ ..+.|+-|+.....++.+..+++ +++..+|.+++. .+.|.+|+.+|++||++
T Consensus 23 l~dqik~L~-d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~-~~eyrrA~~~y~qALq~ 92 (167)
T 3ffl_A 23 VIDHVRDMA-AAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFH-DKEYRNAVSKYTMALQQ 92 (167)
T ss_dssp HHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHc-ccHHHHHHHHHHHHHHH
Confidence 333344455 48999999999998776644333 377889999887 57899999999999875
No 236
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=93.68 E-value=0.18 Score=44.41 Aligned_cols=55 Identities=27% Similarity=0.347 Sum_probs=50.6
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC
Q 027404 167 IRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPD 222 (224)
Q Consensus 167 ~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~ferAL~l~P~ 222 (224)
..|++++|++.+...|+.+|.|+.....|-.+++. .|++++|+..++.+.+++|+
T Consensus 9 ~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv-~G~w~RA~~QL~~~a~l~p~ 63 (273)
T 1zbp_A 9 SEGQLQQALELLIEAIKASPKDASLRSSFIELLCI-DGDFERADEQLMQSIKLFPE 63 (273)
T ss_dssp TTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCGG
T ss_pred hCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHhCch
Confidence 47999999999999999999999999888888776 58999999999999999996
No 237
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=93.20 E-value=1.4 Score=40.96 Aligned_cols=48 Identities=17% Similarity=-0.022 Sum_probs=20.2
Q ss_pred CCHHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKA--YPEDALVLANYAKFLKEIRGDFVKAEEYCGRAIL 183 (224)
Q Consensus 134 ~d~e~A~~~yerALe~--dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ 183 (224)
+++++|..+|+++.+. .| |..++..+=..+. ..|+.++|++.|++..+
T Consensus 119 g~~~~A~~l~~~M~~~g~~P-d~~tyn~lI~~~~-~~g~~~~A~~l~~~M~~ 168 (501)
T 4g26_A 119 DDPEMAFDMVKQMKAFGIQP-RLRSYGPALFGFC-RKGDADKAYEVDAHMVE 168 (501)
T ss_dssp TCHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCC-ccceehHHHHHHH-HCCCHHHHHHHHHHHHh
Confidence 3445555555554443 12 2233333222232 34555555555554443
No 238
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=92.87 E-value=0.49 Score=44.41 Aligned_cols=31 Identities=16% Similarity=-0.046 Sum_probs=27.3
Q ss_pred CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 027404 150 YPEDALVLANYAKFLKEIRGDFVKAEEYCGRA 181 (224)
Q Consensus 150 dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erA 181 (224)
..+++..|..+|.++. .+++++.|+++|.++
T Consensus 677 ~~~~~~~W~~la~~al-~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 677 DESAEMKWRALGDASL-QRFNFKLAIEAFTNA 707 (814)
T ss_dssp TCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHH
T ss_pred hhCcHhHHHHHHHHHH-HcCCHHHHHHHHHHc
Confidence 5567899999999887 699999999999986
No 239
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=92.28 E-value=1.8 Score=40.10 Aligned_cols=83 Identities=13% Similarity=-0.049 Sum_probs=61.9
Q ss_pred CCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHHcCChHHH
Q 027404 133 GKESESMDVYYQEMIKAYPE-DALVLANYAKFLKEIRGDFVKAEEYCGRAILA--KPGDGNVLSMYGDLIWINHKDAPRA 209 (224)
Q Consensus 133 ~~d~e~A~~~yerALe~dP~-na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~l--dP~da~al~~lG~ll~~~~gd~eeA 209 (224)
.+.+++|...|+++.+..-. |..++..+-..+. ..|++++|+++|++..+. .| +...|..+-..+.. .|++++|
T Consensus 83 ~~~l~~A~~lf~~M~~~G~~Pd~~tyn~lI~~~~-~~g~~~~A~~l~~~M~~~g~~P-d~~tyn~lI~~~~~-~g~~~~A 159 (501)
T 4g26_A 83 NPGLSRGFDIFKQMIVDKVVPNEATFTNGARLAV-AKDDPEMAFDMVKQMKAFGIQP-RLRSYGPALFGFCR-KGDADKA 159 (501)
T ss_dssp CHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHHHH-TTCHHHH
T ss_pred cchHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHcCCCC-ccceehHHHHHHHH-CCCHHHH
Confidence 35789999999999886322 5667777776776 689999999999998875 45 44555544444444 6889999
Q ss_pred HHHHHHHHH
Q 027404 210 KSYFDRAVH 218 (224)
Q Consensus 210 ~~~ferAL~ 218 (224)
..+|++..+
T Consensus 160 ~~l~~~M~~ 168 (501)
T 4g26_A 160 YEVDAHMVE 168 (501)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999998775
No 240
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=89.74 E-value=0.83 Score=41.04 Aligned_cols=49 Identities=6% Similarity=-0.060 Sum_probs=44.8
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAIL 183 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ 183 (224)
+++++|+..++++++.+|-+-.++..+-.+++ ..|+..+|++.|+++-+
T Consensus 185 g~~~~a~~~l~~~~~~~P~~E~~~~~lm~al~-~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 185 GRASAVIAELEALTFEHPYREPLWTQLITAYY-LSDRQSDALGAYRRVKT 233 (388)
T ss_dssp TCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-TTTCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHH
Confidence 78999999999999999999999999888887 69999999999998754
No 241
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=89.38 E-value=0.84 Score=39.13 Aligned_cols=48 Identities=21% Similarity=0.149 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHH-----HCCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 027404 136 SESMDVYYQEMIK-----AYPEDA---LVLANYAKFLKEIRGDFVKAEEYCGRAIL 183 (224)
Q Consensus 136 ~e~A~~~yerALe-----~dP~na---~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ 183 (224)
.+.|..+|++|++ +.|.|| .+..|++.|+++..++.++|.+..++|+.
T Consensus 146 ~e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 146 AENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4578889999984 588888 45668999999989999999888888775
No 242
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=88.99 E-value=0.92 Score=39.02 Aligned_cols=48 Identities=21% Similarity=0.196 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHH-----HCCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 027404 136 SESMDVYYQEMIK-----AYPEDA---LVLANYAKFLKEIRGDFVKAEEYCGRAIL 183 (224)
Q Consensus 136 ~e~A~~~yerALe-----~dP~na---~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ 183 (224)
.+.|..+|++|++ +.|.|| .+..|++.|+++..++.++|.+..++|++
T Consensus 149 ~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd 204 (236)
T 3iqu_A 149 IDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFD 204 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 5678899999875 578888 45668999999999999999888877764
No 243
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=88.83 E-value=0.95 Score=39.47 Aligned_cols=48 Identities=19% Similarity=0.149 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHH----HCCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 027404 136 SESMDVYYQEMIK----AYPEDA---LVLANYAKFLKEIRGDFVKAEEYCGRAIL 183 (224)
Q Consensus 136 ~e~A~~~yerALe----~dP~na---~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ 183 (224)
.+.|..+|++|++ +.|.|| .+..|++.|+++..++.++|.+..++|+.
T Consensus 172 ~e~a~~aY~~A~~iA~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 226 (260)
T 2npm_A 172 AEDALKAYKDATVVAKDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFE 226 (260)
T ss_dssp HHHHHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4578899999986 477788 46678999999989999999998888875
No 244
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=88.43 E-value=1.1 Score=38.91 Aligned_cols=48 Identities=25% Similarity=0.225 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHH-----HCCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 027404 136 SESMDVYYQEMIK-----AYPEDA---LVLANYAKFLKEIRGDFVKAEEYCGRAIL 183 (224)
Q Consensus 136 ~e~A~~~yerALe-----~dP~na---~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ 183 (224)
.+.|..+|++|++ +.|.|| .+..|++.|+++..++.++|....++|+.
T Consensus 147 ~~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd 202 (248)
T 3uzd_A 147 VESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFD 202 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4678899999875 578888 45668999999999999999888777764
No 245
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=88.25 E-value=1.1 Score=39.07 Aligned_cols=48 Identities=21% Similarity=0.163 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHH-----HCCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 027404 136 SESMDVYYQEMIK-----AYPEDA---LVLANYAKFLKEIRGDFVKAEEYCGRAIL 183 (224)
Q Consensus 136 ~e~A~~~yerALe-----~dP~na---~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ 183 (224)
.+.|..+|++|++ +.|.|| .+..|++.|+++..++.++|....++|+.
T Consensus 151 ~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 206 (260)
T 1o9d_A 151 AESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 4578999999984 588898 46678999999999999999888888774
No 246
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=87.73 E-value=5.9 Score=33.31 Aligned_cols=66 Identities=17% Similarity=0.152 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHH--H---------------hCCCCHHHHH-HHHHHHHHHcCChHHHHHHHHH
Q 027404 154 ALVLANYAKFLKEIRGDFVKAEEYCGRAI--L---------------AKPGDGNVLS-MYGDLIWINHKDAPRAKSYFDR 215 (224)
Q Consensus 154 a~~l~nlA~~l~e~~Gd~eeAe~~~erAL--~---------------ldP~da~al~-~lG~ll~~~~gd~eeA~~~fer 215 (224)
....+--+.++. ...|+.+|+.+++..| + +||.|.+... .+|.++ .+.++.+||+.+|.+
T Consensus 62 ~Ts~YYk~LCy~-klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~ll-tq~g~r~EaI~y~~~ 139 (242)
T 3kae_A 62 CTSKYYESLCYK-KKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLC-TLSGYREEGIGHYVR 139 (242)
T ss_dssp HHHHHHHHHHHH-HTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHH-HHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHH-HHhcCHHHhhhHhhh
Confidence 333333344444 6899999999999999 2 3456666544 566654 557899999999999
Q ss_pred HHHhCC
Q 027404 216 AVHSAP 221 (224)
Q Consensus 216 AL~l~P 221 (224)
...+.|
T Consensus 140 Sf~~~~ 145 (242)
T 3kae_A 140 SFGKSF 145 (242)
T ss_dssp HHHHCC
T ss_pred hcCCcc
Confidence 988776
No 247
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=87.43 E-value=3.1 Score=34.11 Aligned_cols=43 Identities=9% Similarity=0.006 Sum_probs=35.3
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAI 182 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL 182 (224)
|+++.|.+..+.. ++...|..+|.... .+|+++-|++||.++=
T Consensus 19 g~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL-~~gn~~lAe~cy~~~~ 61 (177)
T 3mkq_B 19 GNLDAALDEAKKL-----NDSITWERLIQEAL-AQGNASLAEMIYQTQH 61 (177)
T ss_dssp TCHHHHHHHHHHH-----CCHHHHHHHHHHHH-HTTCHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHh-----CCHHHHHHHHHHHH-HcCChHHHHHHHHHhC
Confidence 6777777776554 77899999999887 6999999999998763
No 248
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=87.37 E-value=1.5 Score=38.21 Aligned_cols=48 Identities=21% Similarity=0.149 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHH-----HCCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 027404 136 SESMDVYYQEMIK-----AYPEDA---LVLANYAKFLKEIRGDFVKAEEYCGRAIL 183 (224)
Q Consensus 136 ~e~A~~~yerALe-----~dP~na---~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ 183 (224)
.+.|..+|++|++ +.|.|| .+..|++.|+++..++.++|.+..++|++
T Consensus 172 ~e~a~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd 227 (261)
T 3ubw_A 172 AENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 227 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4678889999874 578888 45668999999989999999888887764
No 249
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=85.53 E-value=4.9 Score=34.31 Aligned_cols=49 Identities=14% Similarity=-0.014 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 027404 136 SESMDVYYQEMIKA-----YPEDA---LVLANYAKFLKEIRGDFVKAEEYCGRAILA 184 (224)
Q Consensus 136 ~e~A~~~yerALe~-----dP~na---~~l~nlA~~l~e~~Gd~eeAe~~~erAL~l 184 (224)
.+.|..+|+.|+++ .|.|| .+..|++.|+++..++.++|....++|+++
T Consensus 141 ~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~ 197 (227)
T 2o8p_A 141 LEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKI 197 (227)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 78999999999863 55565 678899999999999999999999999874
No 250
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=85.39 E-value=1.1 Score=39.21 Aligned_cols=49 Identities=24% Similarity=0.460 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHH-----H--CCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 027404 136 SESMDVYYQEMIK-----A--YPEDA---LVLANYAKFLKEIRGDFVKAEEYCGRAILA 184 (224)
Q Consensus 136 ~e~A~~~yerALe-----~--dP~na---~~l~nlA~~l~e~~Gd~eeAe~~~erAL~l 184 (224)
.+.|..+|++|++ + .|.|| .+..|++.|+++..++.++|.+..++|++-
T Consensus 168 ~e~a~~aYq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 168 IKQAVEFYEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 4678899999875 4 68888 456689999999899999999999999875
No 251
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=84.60 E-value=2 Score=42.59 Aligned_cols=48 Identities=10% Similarity=-0.119 Sum_probs=43.4
Q ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 027404 133 GKESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRA 181 (224)
Q Consensus 133 ~~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erA 181 (224)
+++++-|..+.++|+..-|.+...|+.||.+|. ..||++.|+-.+.-+
T Consensus 350 K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi-~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 350 RGDYELALGVSNTSTELALDSFESWYNLARCHI-KKEEYEKALFAINSM 397 (754)
T ss_dssp TTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHH-HTTCHHHHHHHHHHS
T ss_pred cCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHH-HhccHHHHHHHHhcC
Confidence 489999999999999999999999999999987 699999999755544
No 252
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=81.31 E-value=3.6 Score=37.29 Aligned_cols=84 Identities=12% Similarity=0.057 Sum_probs=56.3
Q ss_pred CCHHHHHHHHHHHHHHCCC--C-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCCHHHH----HHHHHHHHHHcC
Q 027404 134 KESESMDVYYQEMIKAYPE--D-ALVLANYAKFLKEIRGDFVKAEEYCGRAILA--KPGDGNVL----SMYGDLIWINHK 204 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~--n-a~~l~nlA~~l~e~~Gd~eeAe~~~erAL~l--dP~da~al----~~lG~ll~~~~g 204 (224)
|+++.|.++|.++...... + .+++.....+.. ..+|+..|..++.+|-.+ ...|.... ...|.+++ ..+
T Consensus 145 Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l-~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~~~gl~~l-~~r 222 (429)
T 4b4t_R 145 GDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGF-FYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKTYYGIHCL-AVR 222 (429)
T ss_dssp CCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHGGG-GTS
T ss_pred CCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHH-HhC
Confidence 6778899999999876433 3 256666666655 479999999999998754 22233322 12333333 357
Q ss_pred ChHHHHHHHHHHHHh
Q 027404 205 DAPRAKSYFDRAVHS 219 (224)
Q Consensus 205 d~eeA~~~ferAL~l 219 (224)
+|.+|..+|-.++..
T Consensus 223 ~f~~Aa~~f~e~~~t 237 (429)
T 4b4t_R 223 NFKEAAKLLVDSLAT 237 (429)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhcc
Confidence 899999999877653
No 253
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=79.35 E-value=6.6 Score=35.80 Aligned_cols=84 Identities=17% Similarity=0.096 Sum_probs=58.8
Q ss_pred CCHHHHHHHHHHHHHH--CCCCH----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---CCCHHH---HHHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKA--YPEDA----LVLANYAKFLKEIRGDFVKAEEYCGRAILAK---PGDGNV---LSMYGDLIWI 201 (224)
Q Consensus 134 ~d~e~A~~~yerALe~--dP~na----~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ld---P~da~a---l~~lG~ll~~ 201 (224)
+++.+|...+.+.++. ..++. +++..-..++. ..+++.++.++|.+|.... +-++.+ +..++.++..
T Consensus 113 ~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~-~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~~~~Gi~~l 191 (394)
T 3txn_A 113 ALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYH-ALSNLPKARAALTSARTTANAIYCPPKVQGALDLQSGILHA 191 (394)
T ss_dssp TCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHH-HhccHHHHHHHHHHHHhhhccCCCCHHHHHHHHHHhhHHHH
Confidence 6899999999999874 21222 45555566666 6899999999999997654 234443 2233444444
Q ss_pred -HcCChHHHHHHHHHHHH
Q 027404 202 -NHKDAPRAKSYFDRAVH 218 (224)
Q Consensus 202 -~~gd~eeA~~~ferAL~ 218 (224)
..++|.+|..+|-.|++
T Consensus 192 ~~~rdyk~A~~~F~eaf~ 209 (394)
T 3txn_A 192 ADERDFKTAFSYFYEAFE 209 (394)
T ss_dssp HTTSCHHHHHHHHHHHHH
T ss_pred HhccCHHHHHHHHHHHHh
Confidence 57899999999988874
No 254
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=78.47 E-value=10 Score=30.99 Aligned_cols=55 Identities=13% Similarity=0.070 Sum_probs=45.0
Q ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHHHHH
Q 027404 152 EDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRA 216 (224)
Q Consensus 152 ~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~ferA 216 (224)
.|++..+.+|. ..|+++.|.+..+.. ++...|..+|..... .++++-|+.+|+++
T Consensus 6 ~D~~~rF~LAL----~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~-~gn~~lAe~cy~~~ 60 (177)
T 3mkq_B 6 QDPHIRFDLAL----EYGNLDAALDEAKKL-----NDSITWERLIQEALA-QGNASLAEMIYQTQ 60 (177)
T ss_dssp SCHHHHHHHHH----HTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHH-TTCHHHHHHHHHHT
T ss_pred CChHHHHHHHH----hcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHH-cCChHHHHHHHHHh
Confidence 57888888873 379999999987765 678889999987655 68899999999875
No 255
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=78.07 E-value=6.8 Score=37.75 Aligned_cols=80 Identities=10% Similarity=0.119 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHHHHHHHHH
Q 027404 136 SESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDR 215 (224)
Q Consensus 136 ~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~eeA~~~fer 215 (224)
..++..++.+++...+++. +...++.... +.+|++.|..+|++.-...+..+...+.+|.++.. .|+.++|..+|++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~-~~e~~~r~Al-r~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~-~g~~~~a~~~~~~ 344 (618)
T 1qsa_A 268 TDEQAKWRDDAIMRSQSTS-LIERRVRMAL-GTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLE-RGREAEAKEILHQ 344 (618)
T ss_dssp CHHHHHHHHHHHHTCCCHH-HHHHHHHHHH-HHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred ChHHHHHHHhccccCCChH-HHHHHHHHHH-HCCCHHHHHHHHHHccccccccHhHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 4677888888766544443 3334444443 47999999999987665545667778888987654 5889999999999
Q ss_pred HHH
Q 027404 216 AVH 218 (224)
Q Consensus 216 AL~ 218 (224)
+..
T Consensus 345 ~a~ 347 (618)
T 1qsa_A 345 LMQ 347 (618)
T ss_dssp HHT
T ss_pred Hhc
Confidence 875
No 256
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=76.31 E-value=4.8 Score=28.65 Aligned_cols=19 Identities=26% Similarity=0.335 Sum_probs=16.0
Q ss_pred HHcCCHHHHHHHHHHHHHh
Q 027404 166 EIRGDFVKAEEYCGRAILA 184 (224)
Q Consensus 166 e~~Gd~eeAe~~~erAL~l 184 (224)
+..|++++|+.+|..||+.
T Consensus 22 D~~g~y~eAl~lY~~aie~ 40 (83)
T 2v6y_A 22 DKEGKVEDAITYYKKAIEV 40 (83)
T ss_dssp HHTTCHHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHHH
Confidence 5789999999999988853
No 257
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=75.75 E-value=36 Score=30.85 Aligned_cols=83 Identities=7% Similarity=0.177 Sum_probs=56.1
Q ss_pred CCHHHHHHHHHHHHHH--CCCC----HHHHHHHHHHHHHHcCCHHHHHHHHHHHH---HhCCCCHHH----HHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKA--YPED----ALVLANYAKFLKEIRGDFVKAEEYCGRAI---LAKPGDGNV----LSMYGDLIW 200 (224)
Q Consensus 134 ~d~e~A~~~yerALe~--dP~n----a~~l~nlA~~l~e~~Gd~eeAe~~~erAL---~ldP~da~a----l~~lG~ll~ 200 (224)
|++.+|...++....- ...+ .+++....+++. ..+|+.+|..+++++- ...+.++.. +..+|.++
T Consensus 151 g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l-~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~~~~~~~~~~- 228 (445)
T 4b4t_P 151 GKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSI-LKGDYSQATVLSRKILKKTFKNPKYESLKLEYYNLLVKIS- 228 (445)
T ss_dssp TCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHH-
T ss_pred cCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHhhcccCCcHHHHHHHHHHHHHHH-
Confidence 6888898888887532 1122 256666677666 5899999999999874 234445442 23344444
Q ss_pred HHcCChHHHHHHHHHHHH
Q 027404 201 INHKDAPRAKSYFDRAVH 218 (224)
Q Consensus 201 ~~~gd~eeA~~~ferAL~ 218 (224)
...++|.+|-.+|..++.
T Consensus 229 ~~e~~y~~a~~~y~e~~~ 246 (445)
T 4b4t_P 229 LHKREYLEVAQYLQEIYQ 246 (445)
T ss_dssp HHHCCHHHHHHHHHHHHH
T ss_pred HHhhhHHHHHHHHHHHHh
Confidence 446789999999988875
No 258
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=75.68 E-value=5.1 Score=28.65 Aligned_cols=19 Identities=21% Similarity=0.174 Sum_probs=15.8
Q ss_pred HHcCCHHHHHHHHHHHHHh
Q 027404 166 EIRGDFVKAEEYCGRAILA 184 (224)
Q Consensus 166 e~~Gd~eeAe~~~erAL~l 184 (224)
+..|++++|+.+|..||+.
T Consensus 30 D~~g~y~eAl~lY~~aie~ 48 (83)
T 2w2u_A 30 DKEGNAEEAITNYKKAIEV 48 (83)
T ss_dssp HHTTCHHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHHH
Confidence 5789999999999888853
No 259
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=74.17 E-value=6.3 Score=28.04 Aligned_cols=45 Identities=20% Similarity=0.160 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 027404 136 SESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDG 189 (224)
Q Consensus 136 ~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da 189 (224)
.+.|+.+..+|++.|-. .+|..++. -|..|+++|.+++...|+..
T Consensus 8 ~~~Ai~lv~~Ave~D~~-----g~y~eAl~----lY~~aie~l~~~lk~e~d~~ 52 (83)
T 2v6y_A 8 EDMARKYAILAVKADKE-----GKVEDAIT----YYKKAIEVLSQIIVLYPESV 52 (83)
T ss_dssp HHHHHHHHHHHHHHHHT-----TCHHHHHH----HHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHHHHHHh-----ccHHHHHH----HHHHHHHHHHHHHHHCCCHH
Confidence 46889999999887432 23333332 25689999999998877654
No 260
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=73.10 E-value=6.9 Score=27.96 Aligned_cols=45 Identities=20% Similarity=0.180 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 027404 136 SESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDG 189 (224)
Q Consensus 136 ~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da 189 (224)
.+.|+.+..+|++.|-. .+|..++. -|.+|+++|.+++...|+..
T Consensus 16 ~~~Ai~lv~~Ave~D~~-----g~y~eAl~----lY~~aie~l~~alk~e~d~~ 60 (83)
T 2w2u_A 16 EEMARKYAINAVKADKE-----GNAEEAIT----NYKKAIEVLAQLVSLYRDGS 60 (83)
T ss_dssp HHHHHHHHHHHHHHHHT-----TCHHHHHH----HHHHHHHHHHHHHHHSTTSS
T ss_pred HHHHHHHHHHHHHHHHh-----ccHHHHHH----HHHHHHHHHHHHHHHCCCHH
Confidence 56888999999887432 22332222 25589999999998877544
No 261
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=72.35 E-value=47 Score=34.51 Aligned_cols=82 Identities=7% Similarity=-0.139 Sum_probs=58.0
Q ss_pred CCHHHHHHHHHHHHH-----HCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHHcCCh
Q 027404 134 KESESMDVYYQEMIK-----AYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILA--KPGDGNVLSMYGDLIWINHKDA 206 (224)
Q Consensus 134 ~d~e~A~~~yerALe-----~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~l--dP~da~al~~lG~ll~~~~gd~ 206 (224)
|++++|...|+++-+ ..| |...|+.+=..++ +.|++++|.+.|++-.+. .|+ ...|..+=..+...+...
T Consensus 141 G~leeA~~Lf~eM~~m~~kG~~P-dvvTYNtLI~Glc-k~G~~~eA~~Lf~eM~~~G~~PD-vvTYntLI~glcK~G~~~ 217 (1134)
T 3spa_A 141 DQLPLAHHLLVVHHGQRQKRKLL-TLDMYNAVMLGWA-RQGAFKELVYVLFMVKDAGLTPD-LLSYAAALQCMGRQDQDA 217 (1134)
T ss_dssp TCHHHHHHHHHHHHHSHHHHTTC-CHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHTTCCCC-HHHHHHHHHHHHHHTCCH
T ss_pred CCHHHHHHHHHHHHHHhhcCCCC-CHhHHHHHHHHHH-hCCCHHHHHHHHHHHHHcCCCCc-HHHHHHHHHHHHhCCCcH
Confidence 799999999977653 345 4566666655666 689999999999988864 463 444544444555543335
Q ss_pred HHHHHHHHHHHH
Q 027404 207 PRAKSYFDRAVH 218 (224)
Q Consensus 207 eeA~~~ferAL~ 218 (224)
++|..+|++...
T Consensus 218 e~A~~Ll~EM~~ 229 (1134)
T 3spa_A 218 GTIERCLEQMSQ 229 (1134)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 788999988765
No 262
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=72.05 E-value=12 Score=31.81 Aligned_cols=52 Identities=2% Similarity=-0.082 Sum_probs=41.6
Q ss_pred cCCHHHHHHHHHHHHHh-----CCCCHH---HHHHHHHHHHHHcCChHHHHHHHHHHHHh
Q 027404 168 RGDFVKAEEYCGRAILA-----KPGDGN---VLSMYGDLIWINHKDAPRAKSYFDRAVHS 219 (224)
Q Consensus 168 ~Gd~eeAe~~~erAL~l-----dP~da~---al~~lG~ll~~~~gd~eeA~~~ferAL~l 219 (224)
.|+.+.|..+|+.|+++ .|.||. ...++..++++..++.++|....++|+.+
T Consensus 138 ~g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~ 197 (227)
T 2o8p_A 138 LCSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKI 197 (227)
T ss_dssp SSCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 47788999999999864 455543 45578888999889999999999999764
No 263
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=71.80 E-value=18 Score=30.15 Aligned_cols=76 Identities=11% Similarity=0.052 Sum_probs=49.8
Q ss_pred HHHHHHHHH---------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH--hCCCCHHHHHHHHHHHHHHcCChHHH
Q 027404 141 VYYQEMIKA---------YPEDALVLANYAKFLKEIRGDFVKAEEYCGRAIL--AKPGDGNVLSMYGDLIWINHKDAPRA 209 (224)
Q Consensus 141 ~~yerALe~---------dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~--ldP~da~al~~lG~ll~~~~gd~eeA 209 (224)
..++++++. ||..-.+|..|+.++. ......+...|.-... +--..+..|..+|.++ ...|++++|
T Consensus 58 ~lLErc~~~F~~~~rYkND~RYLklWl~Ya~~~~--~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~l-E~~g~~~~A 134 (202)
T 3esl_A 58 STMERCLIYIQDMETYRNDPRFLKIWIWYINLFL--SNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLL-ENAQFFLEA 134 (202)
T ss_dssp HHHHHHHHHHTTCGGGTTCHHHHHHHHHHHHHHS--TTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHH-HHTTCHHHH
T ss_pred HHHHHHHHHhcccccccCCHHHHHHHHHHHHhhc--ccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHH-HHcCCHHHH
Confidence 466677654 3333466667776431 3446677777776664 4455677777777665 446789999
Q ss_pred HHHHHHHHHh
Q 027404 210 KSYFDRAVHS 219 (224)
Q Consensus 210 ~~~ferAL~l 219 (224)
.++|+.+++-
T Consensus 135 ~~Vy~~GI~~ 144 (202)
T 3esl_A 135 KVLLELGAEN 144 (202)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHc
Confidence 9999888864
No 264
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=71.79 E-value=21 Score=33.19 Aligned_cols=13 Identities=0% Similarity=-0.238 Sum_probs=9.9
Q ss_pred CCHHHHHHHHHHH
Q 027404 134 KESESMDVYYQEM 146 (224)
Q Consensus 134 ~d~e~A~~~yerA 146 (224)
++++.|+.+|.++
T Consensus 695 ~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 695 FNFKLAIEAFTNA 707 (814)
T ss_dssp TCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHc
Confidence 6777788888776
No 265
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=70.61 E-value=13 Score=31.76 Aligned_cols=47 Identities=11% Similarity=-0.091 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHH-----hCCCCHHH---HHHHHHHHHHHcCChHHHHHHHHHHHH
Q 027404 172 VKAEEYCGRAIL-----AKPGDGNV---LSMYGDLIWINHKDAPRAKSYFDRAVH 218 (224)
Q Consensus 172 eeAe~~~erAL~-----ldP~da~a---l~~lG~ll~~~~gd~eeA~~~ferAL~ 218 (224)
++|.++|+.|++ +.|.||.- ..+++.+++...++.++|....++|+.
T Consensus 147 e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 478889998884 57888864 346778888888899999998887775
No 266
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=69.27 E-value=14 Score=31.64 Aligned_cols=48 Identities=13% Similarity=0.022 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHH-----hCCCCHHHH---HHHHHHHHHHcCChHHHHHHHHHHHH
Q 027404 171 FVKAEEYCGRAIL-----AKPGDGNVL---SMYGDLIWINHKDAPRAKSYFDRAVH 218 (224)
Q Consensus 171 ~eeAe~~~erAL~-----ldP~da~al---~~lG~ll~~~~gd~eeA~~~ferAL~ 218 (224)
.+.|.+.|+.|++ +.|.||..+ .+++.+++...++.++|....++|+.
T Consensus 149 ~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd 204 (236)
T 3iqu_A 149 IDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFD 204 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3578889998874 678888743 46777888888899999988777764
No 267
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=69.13 E-value=14 Score=32.09 Aligned_cols=47 Identities=11% Similarity=-0.016 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHH----hCCCCHHH---HHHHHHHHHHHcCChHHHHHHHHHHHH
Q 027404 172 VKAEEYCGRAIL----AKPGDGNV---LSMYGDLIWINHKDAPRAKSYFDRAVH 218 (224)
Q Consensus 172 eeAe~~~erAL~----ldP~da~a---l~~lG~ll~~~~gd~eeA~~~ferAL~ 218 (224)
++|.++|+.|++ +.|.||.- ..+++.++++..++.++|....++|+.
T Consensus 173 e~a~~aY~~A~~iA~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 226 (260)
T 2npm_A 173 EDALKAYKDATVVAKDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFE 226 (260)
T ss_dssp HHHHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 478899999986 56777764 346778888888999999998888875
No 268
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=68.60 E-value=6.1 Score=37.63 Aligned_cols=60 Identities=17% Similarity=0.231 Sum_probs=43.7
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC
Q 027404 160 YAKFLKEIRGDFVKAEEYCGRAILAKPGD-------GNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDD 223 (224)
Q Consensus 160 lA~~l~e~~Gd~eeAe~~~erAL~ldP~d-------a~al~~lG~ll~~~~gd~eeA~~~ferAL~l~P~d 223 (224)
+=+.|. ..+.++.|+.+..++. -|.. +..++++|.+... .++|.+|.++|..|++..|.+
T Consensus 237 lLRnYL-~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~-q~~Y~eA~~~L~~A~rkap~~ 303 (523)
T 4b4t_S 237 ILRDFL-NNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAI-QLDYSTANEYIIAAIRKAPHN 303 (523)
T ss_dssp HHHHHH-HSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHTSSCSCS
T ss_pred HHHHHH-ccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHhCCcc
Confidence 344343 5789999999999996 3322 3345566777654 678999999999999988753
No 269
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=67.76 E-value=15 Score=31.79 Aligned_cols=47 Identities=11% Similarity=-0.063 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHH-----hCCCCHHH---HHHHHHHHHHHcCChHHHHHHHHHHHH
Q 027404 172 VKAEEYCGRAIL-----AKPGDGNV---LSMYGDLIWINHKDAPRAKSYFDRAVH 218 (224)
Q Consensus 172 eeAe~~~erAL~-----ldP~da~a---l~~lG~ll~~~~gd~eeA~~~ferAL~ 218 (224)
+.|.++|+.|+. +.|.||.. ..+++.+++...++.++|....++|+.
T Consensus 152 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 206 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (260)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 478889998884 57888864 346778888888899999988887764
No 270
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=67.73 E-value=15 Score=31.55 Aligned_cols=47 Identities=13% Similarity=0.030 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHH-----hCCCCHHH---HHHHHHHHHHHcCChHHHHHHHHHHHH
Q 027404 172 VKAEEYCGRAIL-----AKPGDGNV---LSMYGDLIWINHKDAPRAKSYFDRAVH 218 (224)
Q Consensus 172 eeAe~~~erAL~-----ldP~da~a---l~~lG~ll~~~~gd~eeA~~~ferAL~ 218 (224)
+.|.+.|+.|+. +.|.||.. ..+++.+++...++.++|....++|+.
T Consensus 148 ~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd 202 (248)
T 3uzd_A 148 ESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFD 202 (248)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 478889998874 67888874 346777888888899999888777764
No 271
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=66.35 E-value=9.4 Score=27.37 Aligned_cols=19 Identities=11% Similarity=0.031 Sum_probs=16.4
Q ss_pred HHcCCHHHHHHHHHHHHHh
Q 027404 166 EIRGDFVKAEEYCGRAILA 184 (224)
Q Consensus 166 e~~Gd~eeAe~~~erAL~l 184 (224)
...|++++|+.+|..||+.
T Consensus 27 D~~g~y~eAl~lY~~Aie~ 45 (86)
T 4a5x_A 27 DSESRYPQALVCYQEGIDL 45 (86)
T ss_dssp HHTTCHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHH
Confidence 4689999999999999853
No 272
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=66.34 E-value=11 Score=27.38 Aligned_cols=34 Identities=9% Similarity=0.090 Sum_probs=25.8
Q ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 027404 135 ESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILA 184 (224)
Q Consensus 135 d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~l 184 (224)
-.+.|+.+..+|++. +..|++++|+.+|..||+.
T Consensus 11 ~l~~Ai~lv~~Ave~----------------D~~g~y~eAl~~Y~~Aie~ 44 (93)
T 1wfd_A 11 DSTAAVAVLKRAVEL----------------DAESRYQQALVCYQEGIDM 44 (93)
T ss_dssp HHHHHHHHHHHHHHH----------------HHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH----------------HHhCCHHHHHHHHHHHHHH
Confidence 456777777777433 5789999999999988853
No 273
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=64.88 E-value=10 Score=28.74 Aligned_cols=34 Identities=9% Similarity=0.059 Sum_probs=25.1
Q ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 027404 135 ESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILA 184 (224)
Q Consensus 135 d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~l 184 (224)
.++.|+.+..+|+ .....|++++|+.+|..||++
T Consensus 14 ~l~kAi~lv~~Av----------------e~D~ag~y~eAl~lY~~Aie~ 47 (117)
T 2cpt_A 14 NLQKAIDLASKAA----------------QEDKAGNYEEALQLYQHAVQY 47 (117)
T ss_dssp HHHHHHHHHHHHH----------------HHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH----------------HHHHccCHHHHHHHHHHHHHH
Confidence 3566776666663 334689999999999998863
No 274
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=64.56 E-value=12 Score=26.76 Aligned_cols=46 Identities=9% Similarity=0.140 Sum_probs=32.0
Q ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 027404 135 ESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDG 189 (224)
Q Consensus 135 d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da 189 (224)
.-..|..+..+|++.|-. .+|..++. -|..|+++|..++...|+..
T Consensus 12 ~~~~A~~lv~~Ave~D~~-----g~y~eAl~----lY~~Aie~ll~alk~e~d~~ 57 (86)
T 4a5x_A 12 QSTAAATVLKRAVELDSE-----SRYPQALV----CYQEGIDLLLQVLKGTKDNT 57 (86)
T ss_dssp HHHHHHHHHHHHHHHHHT-----TCHHHHHH----HHHHHHHHHHHHHHTCCCHH
T ss_pred HHHHHHHHHHHHHHHHHc-----CCHHHHHH----HHHHHHHHHHHHHhhCCCHH
Confidence 346789999999988322 23333332 25689999999999887654
No 275
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=64.10 E-value=20 Score=31.14 Aligned_cols=47 Identities=11% Similarity=-0.091 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHH-----hCCCCHHH---HHHHHHHHHHHcCChHHHHHHHHHHHH
Q 027404 172 VKAEEYCGRAIL-----AKPGDGNV---LSMYGDLIWINHKDAPRAKSYFDRAVH 218 (224)
Q Consensus 172 eeAe~~~erAL~-----ldP~da~a---l~~lG~ll~~~~gd~eeA~~~ferAL~ 218 (224)
+.|.+.|+.|++ +.|.||.. ..+++.+++...++.++|....++|+.
T Consensus 173 e~a~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd 227 (261)
T 3ubw_A 173 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 227 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 478899998874 67888874 346777888888899999988777764
No 276
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=63.97 E-value=13 Score=26.84 Aligned_cols=16 Identities=31% Similarity=0.285 Sum_probs=8.0
Q ss_pred CCCCHHHHHHHHHHHH
Q 027404 132 SGKESESMDVYYQEMI 147 (224)
Q Consensus 132 ~~~d~e~A~~~yerAL 147 (224)
..+++++|..+|.+||
T Consensus 27 ~~g~y~eAl~~Y~~Ai 42 (93)
T 1wfd_A 27 AESRYQQALVCYQEGI 42 (93)
T ss_dssp HTTCHHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHH
Confidence 3355555555555444
No 277
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=62.55 E-value=36 Score=28.57 Aligned_cols=58 Identities=10% Similarity=-0.002 Sum_probs=46.2
Q ss_pred CCHHHHHHHHHHHHH-----------------HCCCCHHHHHH-HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 027404 134 KESESMDVYYQEMIK-----------------AYPEDALVLAN-YAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVL 192 (224)
Q Consensus 134 ~d~e~A~~~yerALe-----------------~dP~na~~l~n-lA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al 192 (224)
+++..|+..++..|+ +||.|-+.+++ +|.++. ..|+.++|+.||.+.....|=...+-
T Consensus 76 KdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~llt-q~g~r~EaI~y~~~Sf~~~~lf~~vE 151 (242)
T 3kae_A 76 KDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCT-LSGYREEGIGHYVRSFGKSFLFSPVE 151 (242)
T ss_dssp TCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCCCHHHHH
T ss_pred HHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHH-HhcCHHHhhhHhhhhcCCccccchHH
Confidence 688999999999982 25677776665 677765 69999999999999999888655543
No 278
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=62.15 E-value=15 Score=25.86 Aligned_cols=34 Identities=9% Similarity=-0.141 Sum_probs=25.5
Q ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 027404 135 ESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILA 184 (224)
Q Consensus 135 d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~l 184 (224)
..+.|..+..+|++ .+..|++++|+.+|..|++.
T Consensus 9 ~l~~A~~l~~~Av~----------------~D~~g~y~eAl~~Y~~aie~ 42 (85)
T 2v6x_A 9 FLTKGIELVQKAID----------------LDTATQYEEAYTAYYNGLDY 42 (85)
T ss_dssp HHHHHHHHHHHHHH----------------HHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH----------------HHHcCCHHHHHHHHHHHHHH
Confidence 45677777777742 24789999999999998863
No 279
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=62.11 E-value=15 Score=32.38 Aligned_cols=65 Identities=11% Similarity=-0.082 Sum_probs=42.2
Q ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHH----------------H---hCCCCHHHHHHHHHHHHHHcCChHHHHHH
Q 027404 152 EDALVLANYAKFLKEIRGDFVKAEEYCGRAI----------------L---AKPGDGNVLSMYGDLIWINHKDAPRAKSY 212 (224)
Q Consensus 152 ~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL----------------~---ldP~da~al~~lG~ll~~~~gd~eeA~~~ 212 (224)
.||+.+..+|..+. ..+++.+|+.||-..- . -.|...+.+...+.+.+...++...|...
T Consensus 132 Gdp~LH~~~a~~~~-~e~~~~~A~~H~i~~~~~s~~~~a~~l~~w~~~~~~~~~~e~dlf~~RaVL~yL~l~n~~~A~~~ 210 (312)
T 2wpv_A 132 GDPYLHNTIGSKLL-EGDFVYEAERYFMLGTHDSMIKYVDLLWDWLCQVDDIEDSTVAEFFSRLVFNYLFISNISFAHES 210 (312)
T ss_dssp CCHHHHHHHHHHHH-HTTCHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTBHHHHHHH
T ss_pred CCHHHHHHHHHHHh-hcCCHHHHHHHHHhCCCccHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 58999999999998 5899999999885321 1 12333344433343333344677777777
Q ss_pred HHHHH
Q 027404 213 FDRAV 217 (224)
Q Consensus 213 ferAL 217 (224)
|+.-.
T Consensus 211 ~~~f~ 215 (312)
T 2wpv_A 211 KDIFL 215 (312)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76544
No 280
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=60.95 E-value=39 Score=32.45 Aligned_cols=49 Identities=20% Similarity=0.205 Sum_probs=39.6
Q ss_pred CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 027404 153 DALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWIN 202 (224)
Q Consensus 153 na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~ 202 (224)
-.+.....|...+ ..|+|.-|.+....++..+|++..+....+.+|.++
T Consensus 448 g~~~~~~~a~~~~-~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l 496 (658)
T 2cfu_A 448 GAERLLEQARASY-ARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQL 496 (658)
T ss_dssp CHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH-HCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 3455555666666 589999999999999999999999988888877554
No 281
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=59.11 E-value=19 Score=25.26 Aligned_cols=14 Identities=14% Similarity=0.104 Sum_probs=6.6
Q ss_pred CCHHHHHHHHHHHH
Q 027404 134 KESESMDVYYQEMI 147 (224)
Q Consensus 134 ~d~e~A~~~yerAL 147 (224)
+++++|..+|.+|+
T Consensus 27 g~y~eAl~~Y~~ai 40 (85)
T 2v6x_A 27 TQYEEAYTAYYNGL 40 (85)
T ss_dssp TCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 44454444444443
No 282
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=58.95 E-value=52 Score=33.43 Aligned_cols=74 Identities=14% Similarity=-0.058 Sum_probs=51.1
Q ss_pred HHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH---hC-----------------C-C--CHHHHHHHHHHHHHH
Q 027404 146 MIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAIL---AK-----------------P-G--DGNVLSMYGDLIWIN 202 (224)
Q Consensus 146 ALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~---ld-----------------P-~--da~al~~lG~ll~~~ 202 (224)
.+..-|.++...+.+|.++. ..|++++|..+|++|.. .+ + . -+..|.... .+++.
T Consensus 834 l~~~~~~~~~~~yl~g~~~L-~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~-~LFe~ 911 (1139)
T 4fhn_B 834 LIGWLNSDPIAVYLKALIYL-KSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLS-KKLFE 911 (1139)
T ss_dssp HHHHSCCCHHHHHHHHHHHH-HTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHH-HHHHH
T ss_pred HhhhccCCcHHHHHHHHHHH-hcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHH-HHHHH
Confidence 34567888888888999887 69999999999998731 10 0 0 112222332 34566
Q ss_pred cCChHHHHHHHHHHHHhCC
Q 027404 203 HKDAPRAKSYFDRAVHSAP 221 (224)
Q Consensus 203 ~gd~eeA~~~ferAL~l~P 221 (224)
.+.++-|+++-+.|+...+
T Consensus 912 ~~~~~~vi~fa~lAi~~~~ 930 (1139)
T 4fhn_B 912 ESAYIDALEFSLLADASKE 930 (1139)
T ss_dssp TSCCHHHHHHHHHHHHHCC
T ss_pred cCCHHHHHHHHHHHHHhcc
Confidence 7789999999999998654
No 283
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=58.31 E-value=47 Score=33.29 Aligned_cols=75 Identities=13% Similarity=-0.073 Sum_probs=52.4
Q ss_pred HHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-hC--------------------CCCHH--HHHHHHHHHH
Q 027404 144 QEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAIL-AK--------------------PGDGN--VLSMYGDLIW 200 (224)
Q Consensus 144 erALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~-ld--------------------P~da~--al~~lG~ll~ 200 (224)
+..+..-|.++..-|-+|.++. ..|++++|..+|++|-. +. ++... .|.... -++
T Consensus 830 ~eL~~~~~~t~~~~yv~gr~~L-~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~-~LF 907 (950)
T 4gq2_M 830 MQLIGWLNSDPIAVYLKALIYL-KSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLS-KKL 907 (950)
T ss_dssp HHHGGGCCSSHHHHHHHHHHHH-HTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHH-HHH
T ss_pred HHHHhhcCCChHHHHHHHHHHH-HcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHH-HHH
Confidence 4455667888888889999987 69999999999998752 11 11111 122222 245
Q ss_pred HHcCChHHHHHHHHHHHHhC
Q 027404 201 INHKDAPRAKSYFDRAVHSA 220 (224)
Q Consensus 201 ~~~gd~eeA~~~ferAL~l~ 220 (224)
+..+.++-++.+.+.||...
T Consensus 908 E~~~a~~~vi~fA~lAI~~~ 927 (950)
T 4gq2_M 908 FEESAYIDALEFSLLADASK 927 (950)
T ss_dssp HHTTCHHHHHHHHHHHHHTC
T ss_pred HhcCCHHHHHHHHHHHHhhc
Confidence 66788999999999999754
No 284
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=58.14 E-value=57 Score=24.52 Aligned_cols=13 Identities=23% Similarity=0.148 Sum_probs=5.6
Q ss_pred CCHHHHHHHHHHH
Q 027404 134 KESESMDVYYQEM 146 (224)
Q Consensus 134 ~d~e~A~~~yerA 146 (224)
+++++|+.+|.+|
T Consensus 32 g~y~eAl~lY~~A 44 (117)
T 2cpt_A 32 GNYEEALQLYQHA 44 (117)
T ss_dssp TCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHH
Confidence 3444444444443
No 285
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=57.67 E-value=17 Score=31.65 Aligned_cols=49 Identities=20% Similarity=0.226 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHH-----h--CCCCHHH---HHHHHHHHHHHcCChHHHHHHHHHHHHh
Q 027404 171 FVKAEEYCGRAIL-----A--KPGDGNV---LSMYGDLIWINHKDAPRAKSYFDRAVHS 219 (224)
Q Consensus 171 ~eeAe~~~erAL~-----l--dP~da~a---l~~lG~ll~~~~gd~eeA~~~ferAL~l 219 (224)
.++|.+.|+.|++ + .|.||.. ..++..++++..++.++|....++|+.-
T Consensus 168 ~e~a~~aYq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 168 IKQAVEFYEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 3578899998875 4 6788774 3467778888788999999999998864
No 286
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=57.08 E-value=11 Score=33.96 Aligned_cols=83 Identities=16% Similarity=0.152 Sum_probs=55.0
Q ss_pred CHHHHHHHHHHHHHHCCC---CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--CC-HHHHHHHHHHHHHHcCChHH
Q 027404 135 ESESMDVYYQEMIKAYPE---DALVLANYAKFLKEIRGDFVKAEEYCGRAILAKP--GD-GNVLSMYGDLIWINHKDAPR 208 (224)
Q Consensus 135 d~e~A~~~yerALe~dP~---na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP--~d-a~al~~lG~ll~~~~gd~ee 208 (224)
..++-......+.+.+-. -..++..+|.+++ ..||+++|.++|.++...-. .+ .+.+...-.+... .+++..
T Consensus 109 ~l~~l~~~~~~~~~~~~~e~e~~~~~~~la~~~~-~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~-~~d~~~ 186 (429)
T 4b4t_R 109 KIKELNEKIQKLEEDDEGELEQAQAWINLGEYYA-QIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFF-YNDQLY 186 (429)
T ss_dssp CHHHHHHHHHHHHHCCSCCCCCSSCCHHHHHHHH-HHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHH-HTCHHH
T ss_pred HHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH-hccHHH
Confidence 444444444444443333 2357889999988 69999999999999987533 33 2334444344433 478999
Q ss_pred HHHHHHHHHHh
Q 027404 209 AKSYFDRAVHS 219 (224)
Q Consensus 209 A~~~ferAL~l 219 (224)
|..++++|..+
T Consensus 187 ~~~~~~ka~~~ 197 (429)
T 4b4t_R 187 VKEKLEAVNSM 197 (429)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999998764
No 287
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=56.22 E-value=49 Score=23.13 Aligned_cols=36 Identities=19% Similarity=0.206 Sum_probs=29.3
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 027404 159 NYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMY 195 (224)
Q Consensus 159 nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~l 195 (224)
.+|..+. .+|++++|..+|-+||.+-|+..+.+..|
T Consensus 22 ~~GE~L~-~~g~~~~~~~hf~nAl~Vc~qP~~LL~i~ 57 (73)
T 3ax2_A 22 QLGEELL-AQGDYEKGVDHLTNAIAVCGQPQQLLQVL 57 (73)
T ss_dssp HHHHHHH-HTTCHHHHHHHHHHHHHTCSSCHHHHHHH
T ss_pred HHHHHHH-HCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 3466666 58999999999999999999988876544
No 288
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=55.66 E-value=7.5 Score=36.99 Aligned_cols=53 Identities=26% Similarity=0.347 Sum_probs=40.2
Q ss_pred CCHHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 027404 134 KESESMDVYYQEMIKAYPED-------ALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDG 189 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~n-------a~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da 189 (224)
+.+++|..+..++. .|.+ ...++.+|++.. .+++|.+|.++|..|+...|.+.
T Consensus 245 ~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a-~q~~Y~eA~~~L~~A~rkap~~~ 304 (523)
T 4b4t_S 245 GEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINA-IQLDYSTANEYIIAAIRKAPHNS 304 (523)
T ss_dssp SCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHTSSCSCSS
T ss_pred CcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHhCCcch
Confidence 56778888888874 4533 234555688876 79999999999999999888653
No 289
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=54.10 E-value=46 Score=30.77 Aligned_cols=64 Identities=20% Similarity=0.099 Sum_probs=42.9
Q ss_pred CHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHhC-----CCCHHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Q 027404 153 DALVLANYAKFLKEIR--GDFVKAEEYCGRAILAK-----PGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVH 218 (224)
Q Consensus 153 na~~l~nlA~~l~e~~--Gd~eeAe~~~erAL~ld-----P~da~al~~lG~ll~~~~gd~eeA~~~ferAL~ 218 (224)
.|.++.|||.+- +.. .....++..|.+||..+ -.|...|..+|..++. ++++.+|+.++..|-.
T Consensus 254 YPmALgnLgDLE-e~~pt~gr~~~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR-~~~~reAl~~WA~Aa~ 324 (472)
T 3re2_A 254 YPMAIANLGDLE-EISPTPGRPPAEELFKEAITVAKREYSDHHIYPYTYLGGYYYR-KKKYYEAIASWVDAGY 324 (472)
T ss_dssp CHHHHHHHHHHH-HHSCCTTSCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred CchhhcchhhHH-hcCCCCCCCCHHHHHHHHHHHHHHHhccCCccchhhhhhhhhh-cchHHHHHHHHHHHHH
Confidence 466666766542 221 11224899999999763 3455667777776654 7899999999887754
No 290
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=53.29 E-value=45 Score=26.94 Aligned_cols=84 Identities=17% Similarity=0.044 Sum_probs=51.0
Q ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCChHH
Q 027404 129 DGDSGKESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPR 208 (224)
Q Consensus 129 ~~~~~~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG~ll~~~~gd~ee 208 (224)
+...+++...-..+|-++ +-.+-.+-..+-. +. .+|..++-.+.+.-.+.-++=.+..+..+|.+|.. -|+..+
T Consensus 70 Dis~C~NlKrVi~C~~~~---n~~se~vd~ALd~-lv-~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~K-lg~~r~ 143 (172)
T 1wy6_A 70 DLDKCQNLKSVVECGVIN---NTLNEHVNKALDI-LV-IQGKRDKLEEIGREILKNNEVSASILVAIANALRR-VGDERD 143 (172)
T ss_dssp CGGGCSCTHHHHHHHHHT---TCCCHHHHHHHHH-HH-HTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHH-TTCHHH
T ss_pred CcHhhhcHHHHHHHHHHh---cchHHHHHHHHHH-HH-HhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHH-hcchhh
Confidence 445566777777777543 3333333333332 22 47777777777776655555567777778877755 467788
Q ss_pred HHHHHHHHHH
Q 027404 209 AKSYFDRAVH 218 (224)
Q Consensus 209 A~~~ferAL~ 218 (224)
|.+.+.+|-+
T Consensus 144 a~eLl~~AC~ 153 (172)
T 1wy6_A 144 ATTLLIEACK 153 (172)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888877753
No 291
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=52.78 E-value=72 Score=25.48 Aligned_cols=56 Identities=11% Similarity=0.086 Sum_probs=39.4
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCC--H----HHHHH-HHHHHHH-HcCChHHHHHHHHHHHH
Q 027404 162 KFLKEIRGDFVKAEEYCGRAILAKPGD--G----NVLSM-YGDLIWI-NHKDAPRAKSYFDRAVH 218 (224)
Q Consensus 162 ~~l~e~~Gd~eeAe~~~erAL~ldP~d--a----~al~~-lG~ll~~-~~gd~eeA~~~ferAL~ 218 (224)
..++ ..|+|=+|-+.++.+....+.. . ..+.. ++..+++ ..++..-|...|++|+.
T Consensus 40 i~lF-n~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~ 103 (161)
T 2ijq_A 40 VRLY-NSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQ 103 (161)
T ss_dssp HHHH-HTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHH-hCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 3455 4799999999999999887765 2 22333 3333332 35789999999999986
No 292
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=50.82 E-value=86 Score=26.02 Aligned_cols=57 Identities=14% Similarity=0.058 Sum_probs=44.4
Q ss_pred CHHHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 027404 135 ESESMDVYYQEMIKAYPE--DALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVL 192 (224)
Q Consensus 135 d~e~A~~~yerALe~dP~--na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al 192 (224)
+...+...|..+....-. .+..|-.+|.++. ..|++++|.+.|++.|+..-....-+
T Consensus 94 ~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE-~~g~~~~A~~Vy~~GI~~~A~P~~rL 152 (202)
T 3esl_A 94 NFHESENTFKYMFNKGIGTKLSLFYEEFSKLLE-NAQFFLEAKVLLELGAENNCRPYNRL 152 (202)
T ss_dssp CHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTTCBSHHHH
T ss_pred ccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHcCCccHHHH
Confidence 355778888888776554 5678888998775 79999999999999999876655443
No 293
>2ca5_A MXIH; transport protein, type III secretion system, needle complex, protein transport, virulence; 2.10A {Shigella flexneri} SCOP: a.2.20.1 PDB: 2v6l_0 3j0r_A
Probab=49.85 E-value=22 Score=25.76 Aligned_cols=30 Identities=10% Similarity=0.181 Sum_probs=20.8
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 027404 170 DFVKAEEYCGRAILAKPGDGNVLSMYGDLI 199 (224)
Q Consensus 170 d~eeAe~~~erAL~ldP~da~al~~lG~ll 199 (224)
+..+++.-...+|+.+|+||.++..|...+
T Consensus 25 ~~~~~v~~Ai~~L~~~PsnPa~LAeyQ~kl 54 (85)
T 2ca5_A 25 TLQGELTLALDKLAKNPSNPQLLAEYQSKL 54 (85)
T ss_dssp HHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 444566666667788898888887776544
No 294
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=48.08 E-value=45 Score=27.13 Aligned_cols=34 Identities=21% Similarity=0.096 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 027404 155 LVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDG 189 (224)
Q Consensus 155 ~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da 189 (224)
..++.+|.++. .++++.+|.++|..|+..-|...
T Consensus 15 ~Y~YYlGr~~~-~~~~y~~A~~~L~~A~~~~~~~~ 48 (203)
T 3t5x_A 15 TYKYYVGRKAM-FDSDFKQAEEYLSFAFEHCHRSS 48 (203)
T ss_dssp HHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSCTTC
T ss_pred HHHHHHHHHHH-HHhCHHHHHHHHHHHHHHCCHhH
Confidence 45556677765 68888888888888888877654
No 295
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=46.39 E-value=60 Score=23.84 Aligned_cols=51 Identities=22% Similarity=0.319 Sum_probs=37.9
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYG 196 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~~lG 196 (224)
.+.++-+.+|.+-++ +|..+. .+|+++.|+.+|-+||.+-|+....+..|-
T Consensus 11 ~d~e~~e~~Fl~eV~-----------lGE~L~-~~g~~e~av~Hf~nAl~Vc~qP~~LL~i~q 61 (95)
T 1om2_A 11 KDAEAVQKFFLEEIQ-----------LGEELL-AQGDYEKGVDHLTNAIAVCGQPQQLLQVLQ 61 (95)
T ss_dssp SSHHHHHHHHHHHHH-----------HHHHHH-HHTCHHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH-----------HHHHHH-HCCCHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 366667777766544 466665 589999999999999999988777665443
No 296
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=46.34 E-value=68 Score=30.20 Aligned_cols=63 Identities=11% Similarity=0.091 Sum_probs=42.2
Q ss_pred CHHHHHHHHHHHHHHc---CCHHHHHHHHHHHHHhC-----CCCHHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Q 027404 153 DALVLANYAKFLKEIR---GDFVKAEEYCGRAILAK-----PGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVH 218 (224)
Q Consensus 153 na~~l~nlA~~l~e~~---Gd~eeAe~~~erAL~ld-----P~da~al~~lG~ll~~~~gd~eeA~~~ferAL~ 218 (224)
.|.++.|||.+- +.. |+ ..++..|.+||..+ -.|...|..+|..++. ++++.+|+.++..|-.
T Consensus 276 YPmALgnLgDLE-e~~pt~gr-~~~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR-~~~~reAl~~WA~Aa~ 346 (550)
T 3u84_A 276 YPMALGNLADLE-ELEPTPGR-PDPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCR-NRNVREALQAWADTAT 346 (550)
T ss_dssp CHHHHHHHHHHH-HHSCCTTC-CCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred CchhhcchhhHh-hcCCCCCC-CCHHHHHHHHHHHHHHHhccCCccceeecchhhhh-cchHHHHHHHHHHHHH
Confidence 456666666532 221 22 25899999999753 3556667777876654 7899999999887754
No 297
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=45.98 E-value=1.1e+02 Score=24.58 Aligned_cols=51 Identities=20% Similarity=0.143 Sum_probs=40.9
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAK 185 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ld 185 (224)
+..++-++.+...+.-++-+|+.+..+|.+|. ..|+..+|.+.+.+|.+..
T Consensus 105 ~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~-Klg~~r~a~eLl~~AC~kG 155 (172)
T 1wy6_A 105 GKRDKLEEIGREILKNNEVSASILVAIANALR-RVGDERDATTLLIEACKKG 155 (172)
T ss_dssp TCHHHHHHHHHHHC--CCSCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTT
T ss_pred ccHhHHHHHHHHHhccCCCChHHHHHHHHHHH-HhcchhhHHHHHHHHHHhh
Confidence 55666666676666777778999999999987 7999999999999998764
No 298
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=44.26 E-value=74 Score=28.38 Aligned_cols=67 Identities=10% Similarity=0.048 Sum_probs=42.2
Q ss_pred CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHH-------HH---------HhCCCCHHHHHHHHHHHHHHcCChHHHHHHH
Q 027404 150 YPEDALVLANYAKFLKEIRGDFVKAEEYCGR-------AI---------LAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 150 dP~na~~l~nlA~~l~e~~Gd~eeAe~~~er-------AL---------~ldP~da~al~~lG~ll~~~~gd~eeA~~~f 213 (224)
.-.||+.+..+|..++ ..+++.+|+.+|-. .+ +..|..+..+..-+.+.+...++...|...|
T Consensus 132 ~~Gdp~LH~~ig~~~~-~e~~~~~Ae~H~ilg~~~s~~~~a~mL~ew~~~~~~~e~dlfiaRaVL~yL~l~n~~~A~~~~ 210 (336)
T 3lpz_A 132 PAGDPELHHVVGTLYV-EEGEFEAAEKHLVLGTKESPEVLARMEYEWYKQDESHTAPLYCARAVLPYLLVANVRAANTAY 210 (336)
T ss_dssp TTCCHHHHHHHHHHHH-HTTCHHHHHHHHTTSCTTHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH-ccCCHHHHHHHHHhcCCchHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 3468899999999998 58999999998831 11 0123334444444444444456778787765
Q ss_pred HHHH
Q 027404 214 DRAV 217 (224)
Q Consensus 214 erAL 217 (224)
+.-+
T Consensus 211 ~~f~ 214 (336)
T 3lpz_A 211 RIFT 214 (336)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
No 299
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=43.01 E-value=48 Score=26.24 Aligned_cols=45 Identities=4% Similarity=0.075 Sum_probs=28.3
Q ss_pred HHHHHHHHHH--hCCCCHHHHHHHHHHHHHHcCChHHHHHHHHHHHHh
Q 027404 174 AEEYCGRAIL--AKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHS 219 (224)
Q Consensus 174 Ae~~~erAL~--ldP~da~al~~lG~ll~~~~gd~eeA~~~ferAL~l 219 (224)
+...|.-... +--..+..|..+|.++ ...+++++|.++|+.+++-
T Consensus 84 p~~if~~L~~~~IG~~~AlfYe~wA~~l-E~~g~~~~A~~Vy~~Gi~~ 130 (152)
T 4a1g_A 84 LHQFFEFLYNHGIGTLSSPLYIAWAGHL-EAQGELQHASAVLQRGIQN 130 (152)
T ss_dssp HHHHHHHHHTTTTTTTBHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCcHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHc
Confidence 5555555543 4445666666677655 3457788888888877764
No 300
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=42.47 E-value=93 Score=24.84 Aligned_cols=35 Identities=23% Similarity=0.219 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 027404 154 ALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDG 189 (224)
Q Consensus 154 a~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da 189 (224)
+..|-.+|.++. ..|++.+|.+.|+++|.......
T Consensus 96 AlfY~~wA~~lE-~~~~~~~A~~Iy~~Gi~~~A~P~ 130 (164)
T 2wvi_A 96 AQFYISWAEEYE-ARENFRKADAIFQEGIQQKAEPL 130 (164)
T ss_dssp HHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTTCBSH
T ss_pred HHHHHHHHHHHH-HcCCHHHHHHHHHHHHHcCCCcH
Confidence 444445555443 45666666666666665544433
No 301
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=41.38 E-value=92 Score=29.17 Aligned_cols=65 Identities=9% Similarity=0.050 Sum_probs=44.0
Q ss_pred CCHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHh-----CCCCHHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Q 027404 152 EDALVLANYAKFLKEIRG--DFVKAEEYCGRAILA-----KPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVH 218 (224)
Q Consensus 152 ~na~~l~nlA~~l~e~~G--d~eeAe~~~erAL~l-----dP~da~al~~lG~ll~~~~gd~eeA~~~ferAL~ 218 (224)
..|.++.|||.+- +..- ....+++.|++||.. +-.+...|..+|..++. .++|.+|..++..|-.
T Consensus 260 ~YPmALgnLgDLE-ei~pt~grp~~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R-~~~~~eAl~~wa~aa~ 331 (489)
T 4gq4_A 260 RYPMALGNLADLE-ELEPTPGRPDPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCR-NRNVREALQAWADTAT 331 (489)
T ss_dssp TCHHHHHHHHHHH-HHSCCTTSCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred hcchhhhcccCHh-hcCCCCCCCCHHHHHHHHHHHHHHhcccCcccceeecchHHHH-hhhHHHHHHHhhhhhh
Confidence 3578888888753 3221 122588899999985 33455556666776654 6789999999987764
No 302
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=41.36 E-value=42 Score=34.09 Aligned_cols=78 Identities=14% Similarity=0.026 Sum_probs=49.3
Q ss_pred CCHHHHHHHHHHHHH---H-----------------CC---CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CCH
Q 027404 134 KESESMDVYYQEMIK---A-----------------YP---EDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKP-GDG 189 (224)
Q Consensus 134 ~d~e~A~~~yerALe---~-----------------dP---~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP-~da 189 (224)
+++++|..+|++|-. . .+ .-+..|.....++ +..+-++-++++.+.||+..+ ++.
T Consensus 856 ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LF-e~~~~~~~vi~fa~lAi~~~~~~~~ 934 (1139)
T 4fhn_B 856 KEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKL-FEESAYIDALEFSLLADASKETDDE 934 (1139)
T ss_dssp TCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHH-HHTSCCHHHHHHHHHHHHHCCSCCH
T ss_pred CCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHhccCCCh
Confidence 688999999988721 1 11 1123444445444 578999999999999998765 444
Q ss_pred H----HHHHHHHHHHHHcCChHHHHHHH
Q 027404 190 N----VLSMYGDLIWINHKDAPRAKSYF 213 (224)
Q Consensus 190 ~----al~~lG~ll~~~~gd~eeA~~~f 213 (224)
. .|.++=...... ++|++|...+
T Consensus 935 ~~~~~l~~~iFk~~L~l-~~ye~Ay~aL 961 (1139)
T 4fhn_B 935 DLSIAITHETLKTACAA-GKFDAAHVAL 961 (1139)
T ss_dssp HHHHHHHHHHHHHHHHH-CCSGGGGHHH
T ss_pred hhHHHHHHHHHHHHHhh-CCHHHHHHHH
Confidence 3 233333333343 6788887665
No 303
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=41.09 E-value=97 Score=22.23 Aligned_cols=55 Identities=11% Similarity=0.042 Sum_probs=36.8
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHH----HHHHHHHHHHH-HcCChHHHHHHHHHHHH
Q 027404 161 AKFLKEIRGDFVKAEEYCGRAILAKPGDGN----VLSMYGDLIWI-NHKDAPRAKSYFDRAVH 218 (224)
Q Consensus 161 A~~l~e~~Gd~eeAe~~~erAL~ldP~da~----al~~lG~ll~~-~~gd~eeA~~~ferAL~ 218 (224)
|..++ ..|+|=+|-+.++.+....|+... .+..++..+++ ..|+. |...|++|+.
T Consensus 8 ~~~lf-n~g~~~eaHEvlE~~W~~~~~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~ 67 (94)
T 2cwy_A 8 VLGLW-RAGRYYEVHEVLEPYWLKATGEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEA 67 (94)
T ss_dssp HHHHH-HTTCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHH
T ss_pred HHHHH-hCCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHH
Confidence 44455 479999999999999988865321 23333433333 34666 8889998876
No 304
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=37.62 E-value=1e+02 Score=27.84 Aligned_cols=82 Identities=11% Similarity=0.055 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHHCCCCH-HH-----HHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCCHHH----HHHHHHHHHHHc
Q 027404 136 SESMDVYYQEMIKAYPEDA-LV-----LANYAKFLKEIRGDFVKAEEYCGRAILA--KPGDGNV----LSMYGDLIWINH 203 (224)
Q Consensus 136 ~e~A~~~yerALe~dP~na-~~-----l~nlA~~l~e~~Gd~eeAe~~~erAL~l--dP~da~a----l~~lG~ll~~~~ 203 (224)
.+.-.+.+..+|+..-+.- .+ -..+|.+++ ..|+|.+|.+.+.+.++- ..++... +..-..++.. .
T Consensus 75 ~~~~~~~~~~~~~~a~~~~r~flr~~l~~kL~~l~~-~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~-~ 152 (394)
T 3txn_A 75 TGIEVQLCKDCIEWAKQEKRTFLRQSLEARLIALYF-DTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHA-L 152 (394)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHH-T
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHH-h
Confidence 3555666777776433332 22 237898888 599999999999998863 2223322 2222233333 5
Q ss_pred CChHHHHHHHHHHHHh
Q 027404 204 KDAPRAKSYFDRAVHS 219 (224)
Q Consensus 204 gd~eeA~~~ferAL~l 219 (224)
+++.+|.++|.+|...
T Consensus 153 ~n~~k~k~~l~~a~~~ 168 (394)
T 3txn_A 153 SNLPKARAALTSARTT 168 (394)
T ss_dssp TCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhh
Confidence 7899999999998764
No 305
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=37.30 E-value=32 Score=33.02 Aligned_cols=49 Identities=14% Similarity=0.094 Sum_probs=41.2
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAIL 183 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ 183 (224)
++++.|..+|+++-......+.+.+-+|.++. ..|+.++|..+|+++..
T Consensus 299 ~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~-~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 299 GDRRGLNTWLARLPMEAKEKDEWRYWQADLLL-ERGREAEAKEILHQLMQ 347 (618)
T ss_dssp TCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHH-HTTCHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHccccccccHhHHHHHHHHHH-HcCCHHHHHHHHHHHhc
Confidence 68999999998776655566888999999875 69999999999999875
No 306
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=37.03 E-value=1.6e+02 Score=24.63 Aligned_cols=31 Identities=6% Similarity=0.122 Sum_probs=14.7
Q ss_pred CCHHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Q 027404 187 GDGNVLSMYGDLIWINHKDAPRAKSYFDRAVH 218 (224)
Q Consensus 187 ~da~al~~lG~ll~~~~gd~eeA~~~ferAL~ 218 (224)
..+..|..+|.++ ...|++++|.++|+.+++
T Consensus 148 ~~AlfYe~wA~~l-E~~g~~~~A~~Vy~~Gi~ 178 (223)
T 4aez_C 148 ESSIFYEEYANYF-ESRGLFQKADEVYQKGKR 178 (223)
T ss_dssp TBHHHHHHHHHHH-HHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHH
Confidence 3444444444433 233455555555555554
No 307
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.79 E-value=29 Score=26.52 Aligned_cols=16 Identities=25% Similarity=0.285 Sum_probs=10.0
Q ss_pred cCCHHHHHHHHHHHHH
Q 027404 168 RGDFVKAEEYCGRAIL 183 (224)
Q Consensus 168 ~Gd~eeAe~~~erAL~ 183 (224)
.|+.+.|+++|++.|.
T Consensus 35 ~g~k~~Al~lYk~GI~ 50 (116)
T 2dl1_A 35 LGQKEEAKNYYKQGIG 50 (116)
T ss_dssp HTCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHH
Confidence 4666666666666553
No 308
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=33.45 E-value=75 Score=26.75 Aligned_cols=53 Identities=17% Similarity=0.161 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHCCC--CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 027404 138 SMDVYYQEMIKAYPE--DALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNV 191 (224)
Q Consensus 138 ~A~~~yerALe~dP~--na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~a 191 (224)
.+...|..+....-. .+..|-.+|.++. ..|++++|.+.|++.|+..-.....
T Consensus 132 ~p~~if~~L~~~~IG~~~AlfYe~wA~~lE-~~g~~~~A~~Vy~~Gi~~~A~P~~r 186 (223)
T 4aez_C 132 EPVELFSFLAHHHIGQESSIFYEEYANYFE-SRGLFQKADEVYQKGKRMKAKPFLR 186 (223)
T ss_dssp CHHHHHHHHHHTTCSTTBHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHTCBSHHH
T ss_pred CHHHHHHHHHHCCcchhHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHcCCccHHH
Confidence 455677777665444 5677778898775 7999999999999999987665443
No 309
>3k66_A Beta-amyloid-like protein; X-RAY amyloid precursor protein, heparin binding, alternative splicing, developmental protein, differentiation; 2.70A {Caenorhabditis elegans} PDB: 3k6b_A*
Probab=31.28 E-value=1e+02 Score=26.31 Aligned_cols=51 Identities=18% Similarity=0.187 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHH--Hh-CCCCHHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCC
Q 027404 171 FVKAEEYCGRAI--LA-KPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAP 221 (224)
Q Consensus 171 ~eeAe~~~erAL--~l-dP~da~al~~lG~ll~~~~gd~eeA~~~ferAL~l~P 221 (224)
...|..+|..|+ .. .|+...++..+-.++....+|-.=.+..|+.+...+|
T Consensus 103 rr~Ale~y~~AL~~q~~pP~~~~Vl~aLk~yiRae~KDR~Htl~hy~Hl~~~dp 156 (239)
T 3k66_A 103 KRDATHDYRQALATHVNKPNKHSVLQSLKAYIRAEEKDRMHTLNRYRHLLKADS 156 (239)
T ss_dssp HHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHhHHHHHHHHHccCH
Confidence 446888888888 33 3443344443333332222333445556666655555
No 310
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=30.64 E-value=46 Score=23.54 Aligned_cols=25 Identities=16% Similarity=0.212 Sum_probs=19.1
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh
Q 027404 159 NYAKFLKEIRGDFVKAEEYCGRAILA 184 (224)
Q Consensus 159 nlA~~l~e~~Gd~eeAe~~~erAL~l 184 (224)
.+|+=+. ..|+|+.|+.||+.+++.
T Consensus 17 k~ARe~A-l~GnYdta~~yY~g~~~q 41 (78)
T 2rpa_A 17 KLAREYA-LLGNYDSAMVYYQGVLDQ 41 (78)
T ss_dssp HHHHHHH-HHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHH-HhcChHHHHHHHHHHHHH
Confidence 3455444 579999999999999864
No 311
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=30.01 E-value=86 Score=23.19 Aligned_cols=34 Identities=15% Similarity=0.028 Sum_probs=21.5
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHH-------HhCCCCHHHHHHH
Q 027404 160 YAKFLKEIRGDFVKAEEYCGRAI-------LAKPGDGNVLSMY 195 (224)
Q Consensus 160 lA~~l~e~~Gd~eeAe~~~erAL-------~ldP~da~al~~l 195 (224)
.|..+. ..|+|++|++|.++|. ++. +...++..|
T Consensus 21 rAe~ll-~~gkydeAIech~kAa~yL~eAmklt-qs~qa~~SL 61 (97)
T 2crb_A 21 RADRLL-AAGKYEEAISCHRKATTYLSEAMKLT-ESEQAHLSL 61 (97)
T ss_dssp HHHHHH-HTTCHHHHHHHHHHHHHHHHHHHTTC-CCHHHHHHH
T ss_pred HHHHHH-hcCCHHHHHHHHHHHHHHHHHHHHhh-ccHHHHHHH
Confidence 344444 5899998888777766 344 555665543
No 312
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=28.15 E-value=2.2e+02 Score=22.53 Aligned_cols=71 Identities=4% Similarity=0.041 Sum_probs=47.3
Q ss_pred HHHHHHHHCCC---------CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH--hCCCCHHHHHHHHHHHHHHcCChHHHH
Q 027404 142 YYQEMIKAYPE---------DALVLANYAKFLKEIRGDFVKAEEYCGRAIL--AKPGDGNVLSMYGDLIWINHKDAPRAK 210 (224)
Q Consensus 142 ~yerALe~dP~---------na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~--ldP~da~al~~lG~ll~~~~gd~eeA~ 210 (224)
.+++++..--+ .-.+|..|+.+ ..+ +...|..... +--..+..|..+|.++ ...+++.+|.
T Consensus 45 lLErc~~~f~~~~~YknD~RyLklWl~ya~~----~~~---p~~if~~L~~~~IG~~~AlfY~~wA~~l-E~~~~~~~A~ 116 (164)
T 2wvi_A 45 LLERAVEALQGEKRYYSDPRFLNLWLKLGRL----CNE---PLDMYSYLHNQGIGVSLAQFYISWAEEY-EARENFRKAD 116 (164)
T ss_dssp HHHHHHHHTTTCGGGTTCHHHHHHHHHHHHH----CSC---HHHHHHHHHHTTSSTTBHHHHHHHHHHH-HHTTCHHHHH
T ss_pred HHHHHHHHhhhhhhhccCHHHHHHHHHHHHh----cCC---HHHHHHHHHHCCcchhhHHHHHHHHHHH-HHcCCHHHHH
Confidence 66666665333 23555555542 344 5556666554 4556777788888766 4578999999
Q ss_pred HHHHHHHHhC
Q 027404 211 SYFDRAVHSA 220 (224)
Q Consensus 211 ~~ferAL~l~ 220 (224)
++|+.+++..
T Consensus 117 ~Iy~~Gi~~~ 126 (164)
T 2wvi_A 117 AIFQEGIQQK 126 (164)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHcC
Confidence 9999999754
No 313
>3o10_A Sacsin; all-helical domain, homodimerization, chaperone; 1.90A {Homo sapiens}
Probab=27.61 E-value=92 Score=23.77 Aligned_cols=16 Identities=6% Similarity=-0.026 Sum_probs=12.8
Q ss_pred CCCCHHHHHHHHHHHH
Q 027404 132 SGKESESMDVYYQEMI 147 (224)
Q Consensus 132 ~~~d~e~A~~~yerAL 147 (224)
+.++.+++..++++|.
T Consensus 2 ~~~~~ee~~~wl~~A~ 17 (141)
T 3o10_A 2 SVGNPVEARRWLRQAR 17 (141)
T ss_dssp CCCCHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHH
Confidence 3467899999999985
No 314
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=27.20 E-value=1.7e+02 Score=26.58 Aligned_cols=48 Identities=17% Similarity=0.215 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHCCC-----------CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 027404 136 SESMDVYYQEMIKAYPE-----------DALVLANYAKFLKEIRGDFVKAEEYCGRAILA 184 (224)
Q Consensus 136 ~e~A~~~yerALe~dP~-----------na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~l 184 (224)
++..+.-++.|+..=|. -..++..+|+++. .++++++|+.+.+++|..
T Consensus 174 y~~I~~DL~~A~~~Lp~~~~~~~~gr~tk~aA~allArvyL-~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 174 YAQSINDLEEALELIPETYVRDAKHKIDNEVVLGILSRACL-YARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHHSCTTCCCSSTTSCCHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccCcccCCcccHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHhc
Confidence 44455556666665442 1356677788776 688888888888888865
No 315
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=25.79 E-value=93 Score=21.64 Aligned_cols=26 Identities=12% Similarity=-0.045 Sum_probs=16.2
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHH
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLAN 159 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~n 159 (224)
+++++|..+|-+||..-|+-...+.-
T Consensus 31 g~~~~~~~hf~nAl~Vc~qP~~LL~i 56 (73)
T 3ax2_A 31 GDYEKGVDHLTNAIAVCGQPQQLLQV 56 (73)
T ss_dssp TCHHHHHHHHHHHHHTCSSCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 34667777777777776665554443
No 316
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=24.23 E-value=2.1e+02 Score=25.71 Aligned_cols=48 Identities=10% Similarity=0.105 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHCCCC--------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 027404 136 SESMDVYYQEMIKAYPED--------ALVLANYAKFLKEIRGDFVKAEEYCGRAILA 184 (224)
Q Consensus 136 ~e~A~~~yerALe~dP~n--------a~~l~nlA~~l~e~~Gd~eeAe~~~erAL~l 184 (224)
++..+.-++.|+..=|.. ..++..+|+++. .++++++|+++.+++|..
T Consensus 170 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allArvyL-~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 170 YTEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYL-YKGEYNEALTMAENAIKG 225 (461)
T ss_dssp HHHHHHHHHHHHHHSCCSCCTTSCCHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccccCCCeeeHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHhc
Confidence 445666677777654432 367777888876 689999999999999863
No 317
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=24.21 E-value=1.7e+02 Score=26.20 Aligned_cols=48 Identities=17% Similarity=0.075 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHCCCC--------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 027404 136 SESMDVYYQEMIKAYPED--------ALVLANYAKFLKEIRGDFVKAEEYCGRAILA 184 (224)
Q Consensus 136 ~e~A~~~yerALe~dP~n--------a~~l~nlA~~l~e~~Gd~eeAe~~~erAL~l 184 (224)
++..+.-++.|+..=|.. ..++..+|+++. .++++++|+++.+++|..
T Consensus 164 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL-~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 164 YDFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYL-YHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHH-hcccHHHHHHHHHHHHhC
Confidence 455666677777664432 356777888876 688999999999888863
No 318
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=24.06 E-value=3.2e+02 Score=28.46 Aligned_cols=60 Identities=5% Similarity=-0.247 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHH-----HhCCCCHHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Q 027404 156 VLANYAKFLKEIRGDFVKAEEYCGRAI-----LAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVH 218 (224)
Q Consensus 156 ~l~nlA~~l~e~~Gd~eeAe~~~erAL-----~ldP~da~al~~lG~ll~~~~gd~eeA~~~ferAL~ 218 (224)
.+..+=..++ +.|+.++|.+.|...- ...| |...|+.+-..+.. .|++++|..+|++...
T Consensus 129 TynaLIdglc-K~G~leeA~~Lf~eM~~m~~kG~~P-dvvTYNtLI~Glck-~G~~~eA~~Lf~eM~~ 193 (1134)
T 3spa_A 129 RLLAFFKCCL-LTDQLPLAHHLLVVHHGQRQKRKLL-TLDMYNAVMLGWAR-QGAFKELVYVLFMVKD 193 (1134)
T ss_dssp HHHHHHHHHH-HHTCHHHHHHHHHHHHHSHHHHTTC-CHHHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-hCCCHHHHHHHHHHHHHHhhcCCCC-CHhHHHHHHHHHHh-CCCHHHHHHHHHHHHH
Confidence 4444555566 6899999999996643 2456 44556655555665 5889999999998765
No 319
>2g0u_A Type III secretion system needle protein; helix-turn-helix, unknown function; NMR {Burkholderia pseudomallei} SCOP: a.2.20.1
Probab=23.95 E-value=2.1e+02 Score=20.83 Aligned_cols=18 Identities=22% Similarity=0.361 Sum_probs=9.0
Q ss_pred HHHHhCCCCHHHHHHHHH
Q 027404 180 RAILAKPGDGNVLSMYGD 197 (224)
Q Consensus 180 rAL~ldP~da~al~~lG~ 197 (224)
.+++.+|+||.++..|..
T Consensus 41 ~~L~~~psNPa~LAe~Qa 58 (92)
T 2g0u_A 41 ANLTKNPSDPTALANYQM 58 (92)
T ss_dssp HHHHHSTTCHHHHHHHHH
T ss_pred HHHhcCCCCHHHHHHHHH
Confidence 344455555555554443
No 320
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=23.75 E-value=2.6e+02 Score=21.84 Aligned_cols=54 Identities=13% Similarity=0.217 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHCC--CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Q 027404 139 MDVYYQEMIKAYP--EDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLS 193 (224)
Q Consensus 139 A~~~yerALe~dP--~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~da~al~ 193 (224)
+...|+.+....- ..+..+-.+|.++. ..|++++|.+.|++.|+.+....+.+.
T Consensus 84 p~~if~~L~~~~IG~~~AlfYe~wA~~lE-~~g~~~~A~~Vy~~Gi~~~A~P~~rL~ 139 (152)
T 4a1g_A 84 LHQFFEFLYNHGIGTLSSPLYIAWAGHLE-AQGELQHASAVLQRGIQNQAEPREFLQ 139 (152)
T ss_dssp HHHHHHHHHTTTTTTTBHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTTCBSHHHHH
T ss_pred HHHHHHHHHHCCCcHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHcCCccHHHHH
Confidence 5566666655433 34677778888774 799999999999999998776655543
No 321
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=23.48 E-value=1.3e+02 Score=22.18 Aligned_cols=16 Identities=19% Similarity=0.059 Sum_probs=11.8
Q ss_pred cCChHHHHHHHHHHHH
Q 027404 203 HKDAPRAKSYFDRAVH 218 (224)
Q Consensus 203 ~gd~eeA~~~ferAL~ 218 (224)
.|+|++|+++.++|..
T Consensus 28 ~gkydeAIech~kAa~ 43 (97)
T 2crb_A 28 AGKYEEAISCHRKATT 43 (97)
T ss_dssp TTCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHH
Confidence 5788888887776653
No 322
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=22.84 E-value=1.8e+02 Score=26.91 Aligned_cols=47 Identities=9% Similarity=0.052 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHH-----CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 027404 137 ESMDVYYQEMIKA-----YPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILA 184 (224)
Q Consensus 137 e~A~~~yerALe~-----dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~l 184 (224)
..++.+|.+||.. +-.+..-+.-+|.+++ +.+++.+|+++.-.|-.+
T Consensus 274 ~~~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~y-R~~~~reAl~~WA~Aa~V 325 (472)
T 3re2_A 274 PPAEELFKEAITVAKREYSDHHIYPYTYLGGYYY-RKKKYYEAIASWVDAGYV 325 (472)
T ss_dssp CCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhccCCccchhhhhhhhh-hcchHHHHHHHHHHHHHH
Confidence 3488899999876 4445566777777888 799999999988877654
No 323
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=22.51 E-value=1.1e+02 Score=28.30 Aligned_cols=87 Identities=6% Similarity=-0.074 Sum_probs=54.0
Q ss_pred CCHHHHHHHHHHHHHHCCCC------------H----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--------C--
Q 027404 134 KESESMDVYYQEMIKAYPED------------A----LVLANYAKFLKEIRGDFVKAEEYCGRAILAKP--------G-- 187 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~n------------a----~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP--------~-- 187 (224)
...+.|.....++...--+| - .+..++-.+|. +.++..-|...++..-...+ .
T Consensus 140 ~~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYF-kl~~~~lckni~k~i~~~~~~p~~~~~p~~q 218 (455)
T 3t5v_B 140 QFLSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYF-RIESPQLCSNIFKNFQPKSMLAHFNEYQLDQ 218 (455)
T ss_dssp HHHHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHH-HSSCCTTHHHHHHTHHHHCCCSCGGGSCHHH
T ss_pred hHHHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHH-HcCCHHHHHHHHHHhccCCCCcChhhCCccc
Confidence 46788888899988762221 1 12223445555 57877777776643222221 1
Q ss_pred CHHHHHHHHHHHHHHcCChHHHHHHHHHHHHh-CCC
Q 027404 188 DGNVLSMYGDLIWINHKDAPRAKSYFDRAVHS-APD 222 (224)
Q Consensus 188 da~al~~lG~ll~~~~gd~eeA~~~ferAL~l-~P~ 222 (224)
-+..++.+|.+++ ...+|.+|.+.+..|++. .|.
T Consensus 219 ~v~Y~YYlGr~~~-~~~~y~~A~~~L~~A~~~lcp~ 253 (455)
T 3t5v_B 219 QIEYRYLLGRYYL-LNSQVHNAFVQFNEAFQSLLNL 253 (455)
T ss_dssp HHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHC
T ss_pred eEeeeHHHHHHHH-HHccHHHHHHHHHHHHHhcCCc
Confidence 1234556777665 467899999999999987 654
No 324
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.80 E-value=1.9e+02 Score=21.97 Aligned_cols=45 Identities=9% Similarity=-0.073 Sum_probs=31.6
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 027404 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPG 187 (224)
Q Consensus 134 ~d~e~A~~~yerALe~dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~ldP~ 187 (224)
..+++|..+..+||.+|-. -.-..|.- .|.+++.+|+++|.+..+
T Consensus 17 ~~h~~AF~~Is~AL~~DE~---g~k~~Al~------lYk~GI~eLe~Gl~I~~~ 61 (116)
T 2dl1_A 17 EAYKKAFLFVNKGLNTDEL---GQKEEAKN------YYKQGIGHLLRGISISSK 61 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHH---TCHHHHHH------HHHHHHHHHHHHHSSCCC
T ss_pred HHHHHHHHHHHHHhhhhhc---CCHHHHHH------HHHHHHHHHHHhcccccc
Confidence 4577888899999988662 12223322 356899999999998774
No 325
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=21.20 E-value=2e+02 Score=27.14 Aligned_cols=46 Identities=11% Similarity=-0.003 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHH-----CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 027404 138 SMDVYYQEMIKA-----YPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILA 184 (224)
Q Consensus 138 ~A~~~yerALe~-----dP~na~~l~nlA~~l~e~~Gd~eeAe~~~erAL~l 184 (224)
.++.+|.+||.. +-.+..-+.-+|.++| +.+++.+|+++.-.|-.+
T Consensus 297 ~~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~y-R~~~~reAl~~WA~Aa~V 347 (550)
T 3u84_A 297 DPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHC-RNRNVREALQAWADTATV 347 (550)
T ss_dssp CHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhccCCccceeecchhhh-hcchHHHHHHHHHHHHHH
Confidence 478889999875 3445566777788888 799999999988877654
No 326
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=20.70 E-value=2.6e+02 Score=25.35 Aligned_cols=30 Identities=20% Similarity=0.274 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHh
Q 027404 189 GNVLSMYGDLIWINHKDAPRAKSYFDRAVHS 219 (224)
Q Consensus 189 a~al~~lG~ll~~~~gd~eeA~~~ferAL~l 219 (224)
..|+..+|.+++. .+++++|+.+.++++..
T Consensus 203 ~aA~allArvyL~-~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 203 EVVLGILSRACLY-ARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-hhhHHHHHHHHHHHHhc
Confidence 4477788888865 57899999999999864
No 327
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=20.32 E-value=44 Score=30.42 Aligned_cols=58 Identities=16% Similarity=0.140 Sum_probs=0.0
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Q 027404 160 YAKFLKEIRGDFVKAEEYCGRAILAK------PGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVH 218 (224)
Q Consensus 160 lA~~l~e~~Gd~eeAe~~~erAL~ld------P~da~al~~lG~ll~~~~gd~eeA~~~ferAL~ 218 (224)
...++.+...|+++|+..+......+ ++-..|+..++++++. .+++++|+++.++++.
T Consensus 156 ~~evy~~I~~DL~~A~~~L~~~~~~~~~~~gr~tk~aA~aLlARvyL~-~~~~~~A~~~a~~vi~ 219 (460)
T 3snx_A 156 VAQVYQQIFDDLNLAQDYLTNYVRKGDGQKFKPNTDVVNGLMARAYLL-TGQWGEAAKAAEAARK 219 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCCCSGGGTTSCCHHHHHHHHHHHHHH-TTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhcccccCCccccCcccCHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHh
Done!