Query 027406
Match_columns 223
No_of_seqs 231 out of 1068
Neff 9.2
Searched_HMMs 46136
Date Fri Mar 29 09:29:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027406.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027406hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd07214 Pat17_isozyme_like Pat 100.0 6.1E-50 1.3E-54 338.2 18.3 210 9-222 1-210 (349)
2 cd07215 Pat17_PNPLA8_PNPLA9_li 100.0 2.6E-46 5.6E-51 314.8 16.5 199 13-222 1-200 (329)
3 cd07211 Pat_PNPLA8 Patatin-lik 100.0 2.4E-44 5.2E-49 300.7 17.1 190 5-222 1-203 (308)
4 cd07217 Pat17_PNPLA8_PNPLA9_li 100.0 2.8E-43 6E-48 296.0 16.2 192 12-222 1-203 (344)
5 cd07216 Pat17_PNPLA8_PNPLA9_li 100.0 7.9E-43 1.7E-47 291.5 15.3 190 12-222 1-204 (309)
6 cd07212 Pat_PNPLA9 Patatin-lik 100.0 6.5E-41 1.4E-45 279.1 14.2 163 14-222 1-181 (312)
7 cd07213 Pat17_PNPLA8_PNPLA9_li 100.0 2.6E-40 5.6E-45 273.7 15.5 171 11-222 1-180 (288)
8 cd07207 Pat_ExoU_VipD_like Exo 100.0 4.7E-38 1E-42 246.4 16.3 171 15-222 2-185 (194)
9 cd07205 Pat_PNPLA6_PNPLA7_NTE1 100.0 1.4E-37 3E-42 240.0 15.8 158 14-221 2-159 (175)
10 cd07228 Pat_NTE_like_bacteria 100.0 2.9E-36 6.2E-41 232.6 14.8 157 14-221 2-159 (175)
11 KOG4231 Intracellular membrane 100.0 2.5E-37 5.5E-42 260.5 9.5 187 6-221 411-612 (763)
12 cd07210 Pat_hypo_W_succinogene 100.0 5.3E-36 1.1E-40 238.6 15.0 158 14-221 2-159 (221)
13 cd07199 Pat17_PNPLA8_PNPLA9_li 100.0 2E-36 4.4E-41 247.0 12.1 146 14-222 1-147 (258)
14 COG3621 Patatin [General funct 100.0 2.8E-35 6E-40 236.9 15.3 195 11-222 8-206 (394)
15 cd07225 Pat_PNPLA6_PNPLA7 Pata 100.0 3.6E-35 7.8E-40 243.7 13.4 166 12-221 15-180 (306)
16 cd07227 Pat_Fungal_NTE1 Fungal 100.0 8.8E-34 1.9E-38 230.7 13.5 164 12-221 10-173 (269)
17 PRK10279 hypothetical protein; 100.0 5.2E-33 1.1E-37 229.7 15.2 161 11-221 4-164 (300)
18 cd07209 Pat_hypo_Ecoli_Z1214_l 100.0 6.5E-33 1.4E-37 220.4 12.8 146 15-221 1-149 (215)
19 cd07198 Patatin Patatin-like p 100.0 3.5E-32 7.5E-37 209.3 12.6 157 15-222 1-162 (172)
20 cd07208 Pat_hypo_Ecoli_yjju_li 100.0 3.3E-32 7.2E-37 223.2 11.0 161 15-221 1-165 (266)
21 cd07218 Pat_iPLA2 Calcium-inde 100.0 1.1E-30 2.3E-35 210.6 15.0 163 15-223 3-168 (245)
22 COG1752 RssA Predicted esteras 100.0 2.7E-30 5.8E-35 215.7 15.4 169 11-221 10-182 (306)
23 cd07222 Pat_PNPLA4 Patatin-lik 100.0 2.3E-30 5.1E-35 209.3 13.9 166 15-222 2-169 (246)
24 cd07204 Pat_PNPLA_like Patatin 100.0 5.1E-30 1.1E-34 206.9 15.1 164 15-222 2-168 (243)
25 cd07221 Pat_PNPLA3 Patatin-lik 100.0 9.5E-30 2.1E-34 205.7 15.4 166 14-223 2-170 (252)
26 cd07230 Pat_TGL4-5_like Triacy 100.0 1.4E-29 3E-34 218.1 15.3 185 11-221 72-269 (421)
27 cd07232 Pat_PLPL Patain-like p 100.0 2.4E-29 5.3E-34 215.7 15.7 183 11-221 66-258 (407)
28 cd07219 Pat_PNPLA1 Patatin-lik 100.0 2.2E-29 4.8E-34 210.5 14.0 167 11-221 11-180 (382)
29 cd07220 Pat_PNPLA2 Patatin-lik 100.0 3.3E-28 7.1E-33 196.1 14.4 166 13-222 5-173 (249)
30 cd07224 Pat_like Patatin-like 100.0 1.4E-27 3E-32 191.7 13.1 157 15-222 2-164 (233)
31 PF01734 Patatin: Patatin-like 99.9 3.5E-27 7.5E-32 183.4 9.7 182 15-222 1-201 (204)
32 cd07223 Pat_PNPLA5-mammals Pat 99.9 7.4E-26 1.6E-30 188.7 13.5 166 12-221 9-177 (405)
33 cd07229 Pat_TGL3_like Triacylg 99.9 1.3E-24 2.9E-29 183.7 15.3 183 11-220 82-293 (391)
34 cd07231 Pat_SDP1-like Sugar-De 99.9 2.2E-24 4.9E-29 176.6 13.0 144 11-221 67-225 (323)
35 cd07206 Pat_TGL3-4-5_SDP1 Tria 99.9 9.7E-25 2.1E-29 178.5 10.1 142 11-221 68-213 (298)
36 KOG2968 Predicted esterase of 99.9 3E-24 6.5E-29 191.2 9.7 167 11-221 838-1004(1158)
37 TIGR03607 patatin-related prot 99.9 2.5E-23 5.4E-28 187.8 14.8 198 12-221 3-287 (739)
38 cd01819 Patatin_and_cPLA2 Pata 99.9 3E-23 6.5E-28 156.8 10.4 138 15-222 1-140 (155)
39 COG4667 Predicted esterase of 99.9 2.1E-22 4.6E-27 158.9 10.9 165 11-221 10-177 (292)
40 KOG2214 Predicted esterase of 99.8 1.6E-18 3.4E-23 147.6 9.0 181 11-221 173-369 (543)
41 KOG0513 Ca2+-independent phosp 99.7 7.6E-18 1.7E-22 146.8 8.4 218 4-222 27-266 (503)
42 KOG3773 Adiponutrin and relate 99.4 3.3E-13 7.1E-18 110.0 5.7 167 12-223 6-175 (354)
43 KOG0513 Ca2+-independent phosp 99.2 1.1E-11 2.3E-16 108.6 4.9 167 10-223 292-477 (503)
44 cd00147 cPLA2_like Cytosolic p 98.2 2.7E-06 6E-11 73.9 6.1 54 9-71 40-95 (438)
45 cd07202 cPLA2_Grp-IVC Group IV 96.9 0.00083 1.8E-08 57.9 3.5 53 9-70 37-90 (430)
46 cd07201 cPLA2_Grp-IVB-IVD-IVE- 96.3 0.0066 1.4E-07 54.0 4.8 53 9-70 51-104 (541)
47 KOG1325 Lysophospholipase [Lip 96.0 0.0066 1.4E-07 54.2 3.6 84 8-98 45-129 (571)
48 PF01735 PLA2_B: Lysophospholi 95.7 0.015 3.3E-07 51.8 4.6 57 14-71 2-59 (491)
49 cd07200 cPLA2_Grp-IVA Group IV 95.1 0.015 3.2E-07 51.7 2.5 53 9-70 42-95 (505)
50 smart00022 PLAc Cytoplasmic ph 94.7 0.034 7.3E-07 50.1 3.8 61 9-71 74-135 (549)
51 cd07203 cPLA2_Fungal_PLB Funga 94.6 0.032 6.9E-07 50.0 3.2 72 9-85 61-134 (552)
52 PF05728 UPF0227: Uncharacteri 78.0 3.3 7.1E-05 32.1 3.7 18 53-70 61-78 (187)
53 PF00698 Acyl_transf_1: Acyl t 77.2 6.8 0.00015 32.8 5.7 33 49-88 82-114 (318)
54 smart00827 PKS_AT Acyl transfe 76.8 7.8 0.00017 31.9 6.0 32 49-87 80-111 (298)
55 PF06361 RTBV_P12: Rice tungro 72.9 1.7 3.8E-05 28.6 0.9 44 21-67 46-89 (110)
56 TIGR03131 malonate_mdcH malona 71.9 12 0.00027 30.8 6.0 31 50-87 75-105 (295)
57 TIGR00128 fabD malonyl CoA-acy 71.8 13 0.00027 30.5 6.0 32 50-88 82-113 (290)
58 PF00756 Esterase: Putative es 70.6 11 0.00025 29.9 5.4 19 53-71 117-135 (251)
59 PRK05282 (alpha)-aspartyl dipe 70.4 5.4 0.00012 32.1 3.3 15 53-67 114-128 (233)
60 PRK00175 metX homoserine O-ace 69.9 7.3 0.00016 33.5 4.3 18 54-71 150-167 (379)
61 PF03575 Peptidase_S51: Peptid 68.0 5.3 0.00012 29.7 2.7 13 53-65 70-82 (154)
62 COG0331 FabD (acyl-carrier-pro 66.5 20 0.00044 30.2 6.1 50 25-90 68-117 (310)
63 PF01764 Lipase_3: Lipase (cla 60.7 6.5 0.00014 28.2 2.0 17 54-70 67-83 (140)
64 PLN02752 [acyl-carrier protein 58.9 35 0.00076 28.9 6.4 33 50-89 123-155 (343)
65 PF03959 FSH1: Serine hydrolas 56.4 13 0.00029 29.1 3.2 20 51-70 102-121 (212)
66 KOG2551 Phospholipase/carboxyh 55.4 13 0.00029 29.6 3.0 33 30-70 91-123 (230)
67 PRK04940 hypothetical protein; 54.5 20 0.00044 27.6 3.8 19 52-70 61-79 (180)
68 PF07859 Abhydrolase_3: alpha/ 54.1 9.3 0.0002 29.4 2.0 17 54-70 74-90 (211)
69 TIGR01392 homoserO_Ac_trn homo 53.3 25 0.00054 29.8 4.6 19 53-71 129-147 (351)
70 TIGR02069 cyanophycinase cyano 50.7 21 0.00046 29.0 3.6 14 53-66 117-130 (250)
71 cd00741 Lipase Lipase. Lipase 46.1 16 0.00034 26.8 2.0 17 54-70 31-47 (153)
72 PF08250 Sperm_act_pep: Sperm- 45.9 7.8 0.00017 15.0 0.2 7 16-22 3-9 (10)
73 COG1647 Esterase/lipase [Gener 42.3 13 0.00028 29.8 1.0 18 54-71 88-105 (243)
74 PRK11071 esterase YqiA; Provis 42.1 81 0.0018 24.1 5.6 19 53-71 63-81 (190)
75 cd03129 GAT1_Peptidase_E_like 41.1 17 0.00037 28.4 1.6 15 54-68 116-130 (210)
76 cd00519 Lipase_3 Lipase (class 40.8 19 0.00042 28.4 1.9 17 54-70 131-147 (229)
77 PLN02408 phospholipase A1 40.2 40 0.00087 29.1 3.8 17 54-70 203-219 (365)
78 COG3150 Predicted esterase [Ge 40.1 41 0.0009 25.8 3.4 35 29-70 44-78 (191)
79 PRK06765 homoserine O-acetyltr 39.3 45 0.00097 29.0 4.0 21 51-71 161-181 (389)
80 PLN02571 triacylglycerol lipas 38.2 45 0.00099 29.3 3.8 17 54-70 229-245 (413)
81 COG2267 PldB Lysophospholipase 37.7 51 0.0011 27.5 4.0 38 28-71 90-127 (298)
82 KOG1454 Predicted hydrolase/ac 37.6 61 0.0013 27.4 4.5 19 53-71 130-148 (326)
83 PF07812 TfuA: TfuA-like prote 37.4 60 0.0013 23.2 3.7 48 24-90 9-56 (120)
84 PRK06489 hypothetical protein; 37.4 24 0.00052 30.0 2.1 21 51-71 154-174 (360)
85 COG3340 PepE Peptidase E [Amin 36.5 27 0.00058 27.8 2.0 44 12-66 85-132 (224)
86 PF00135 COesterase: Carboxyle 35.9 45 0.00097 29.7 3.6 44 21-69 182-226 (535)
87 TIGR03695 menH_SHCHC 2-succiny 35.4 25 0.00054 26.8 1.7 18 54-71 73-90 (251)
88 cd03145 GAT1_cyanophycinase Ty 35.1 23 0.0005 28.0 1.5 45 12-67 84-132 (217)
89 PRK10673 acyl-CoA esterase; Pr 34.8 27 0.0006 27.4 1.9 18 54-71 84-101 (255)
90 COG2819 Predicted hydrolase of 34.1 46 0.00099 27.4 3.0 50 15-69 106-155 (264)
91 PLN02324 triacylglycerol lipas 34.0 74 0.0016 28.0 4.5 16 54-69 218-233 (415)
92 PHA02857 monoglyceride lipase; 33.8 27 0.00059 28.0 1.8 18 54-71 100-117 (276)
93 PLN02802 triacylglycerol lipas 33.4 57 0.0012 29.5 3.7 16 54-69 333-348 (509)
94 cd00312 Esterase_lipase Estera 33.3 62 0.0013 28.7 4.1 39 27-70 157-195 (493)
95 PF00975 Thioesterase: Thioest 33.2 63 0.0014 25.0 3.8 18 52-69 67-84 (229)
96 PF12695 Abhydrolase_5: Alpha/ 33.0 33 0.00072 24.2 2.0 17 54-70 64-80 (145)
97 PF12697 Abhydrolase_6: Alpha/ 33.0 80 0.0017 23.5 4.2 19 53-71 68-86 (228)
98 cd02252 nylC_like nylC-like fa 32.8 69 0.0015 26.3 3.8 34 4-37 50-84 (260)
99 PF12611 DUF3766: Protein of u 32.4 28 0.0006 17.4 1.0 19 147-165 2-20 (24)
100 PRK11126 2-succinyl-6-hydroxy- 32.4 32 0.00068 26.9 1.9 19 53-71 68-86 (242)
101 PRK07581 hypothetical protein; 31.6 33 0.00071 28.7 2.0 19 53-71 126-144 (339)
102 TIGR01250 pro_imino_pep_2 prol 31.5 32 0.00068 27.1 1.8 18 54-71 99-116 (288)
103 TIGR03056 bchO_mg_che_rel puta 31.5 65 0.0014 25.4 3.6 18 54-71 98-115 (278)
104 PRK08775 homoserine O-acetyltr 31.2 33 0.00071 28.9 1.9 18 54-71 141-158 (343)
105 PF00326 Peptidase_S9: Prolyl 31.0 36 0.00077 26.3 2.0 17 54-70 67-83 (213)
106 PF07819 PGAP1: PGAP1-like pro 30.8 33 0.00071 27.3 1.7 18 53-70 87-104 (225)
107 TIGR02240 PHA_depoly_arom poly 30.8 35 0.00076 27.5 1.9 18 54-71 94-111 (276)
108 TIGR02813 omega_3_PfaA polyket 30.7 1.1E+02 0.0024 33.7 5.8 21 49-69 672-692 (2582)
109 PLN02454 triacylglycerol lipas 29.7 1.1E+02 0.0025 26.9 4.9 16 54-69 231-246 (414)
110 PRK10162 acetyl esterase; Prov 29.1 38 0.00082 28.4 1.9 17 54-70 157-173 (318)
111 PF00561 Abhydrolase_1: alpha/ 28.9 97 0.0021 23.4 4.1 19 53-71 46-64 (230)
112 KOG1515 Arylacetamide deacetyl 28.8 27 0.00059 29.8 1.0 19 53-71 168-186 (336)
113 PLN02298 hydrolase, alpha/beta 28.6 35 0.00076 28.4 1.6 18 54-71 137-154 (330)
114 PLN02965 Probable pheophorbida 28.4 34 0.00073 27.2 1.4 19 53-71 74-92 (255)
115 PRK10566 esterase; Provisional 28.3 34 0.00074 26.9 1.5 18 54-71 110-127 (249)
116 TIGR02427 protocat_pcaD 3-oxoa 27.5 39 0.00084 25.8 1.6 18 54-71 82-99 (251)
117 TIGR03611 RutD pyrimidine util 27.5 41 0.0009 26.0 1.8 18 54-71 83-100 (257)
118 PRK10439 enterobactin/ferric e 27.1 2.1E+02 0.0045 25.2 6.2 19 53-71 290-308 (411)
119 PRK03592 haloalkane dehalogena 27.0 44 0.00095 27.2 1.9 19 53-71 95-113 (295)
120 TIGR02821 fghA_ester_D S-formy 26.8 42 0.0009 27.4 1.7 18 54-71 141-158 (275)
121 PLN02824 hydrolase, alpha/beta 26.8 45 0.00098 27.1 1.9 18 54-71 105-122 (294)
122 TIGR00541 hisDCase_pyru histid 26.7 43 0.00094 27.5 1.7 66 51-137 73-138 (310)
123 TIGR02816 pfaB_fam PfaB family 26.3 1.2E+02 0.0027 27.7 4.7 22 48-69 262-283 (538)
124 TIGR01840 esterase_phb esteras 26.2 48 0.001 25.7 1.9 18 54-71 98-115 (212)
125 PLN02385 hydrolase; alpha/beta 25.8 40 0.00087 28.4 1.5 18 54-71 165-182 (349)
126 PRK00870 haloalkane dehalogena 25.5 48 0.001 27.1 1.9 18 54-71 118-135 (302)
127 TIGR01738 bioH putative pimelo 25.5 50 0.0011 25.2 1.9 18 54-71 68-85 (245)
128 PHA03298 envelope glycoprotein 25.2 39 0.00084 24.5 1.1 15 178-192 15-29 (167)
129 PRK10749 lysophospholipase L2; 25.2 48 0.001 27.7 1.9 18 54-71 134-151 (330)
130 PLN02761 lipase class 3 family 25.1 98 0.0021 28.1 3.8 16 54-69 297-312 (527)
131 cd03146 GAT1_Peptidase_E Type 23.8 1.1E+02 0.0025 23.9 3.7 15 53-67 115-129 (212)
132 PRK10640 rhaB rhamnulokinase; 23.8 2E+02 0.0043 25.6 5.6 51 11-72 375-425 (471)
133 TIGR03343 biphenyl_bphD 2-hydr 23.7 48 0.001 26.5 1.6 18 54-71 104-121 (282)
134 PRK10349 carboxylesterase BioH 23.5 57 0.0012 25.8 1.9 21 50-71 74-94 (256)
135 cd00707 Pancreat_lipase_like P 23.5 57 0.0012 26.7 1.9 17 54-70 115-131 (275)
136 PLN02719 triacylglycerol lipas 22.9 1.2E+02 0.0025 27.6 3.8 16 54-69 301-316 (518)
137 COG0657 Aes Esterase/lipase [L 22.7 44 0.00095 27.7 1.1 19 53-71 154-172 (312)
138 PRK13929 rod-share determining 22.7 47 0.001 28.1 1.3 10 14-23 281-290 (335)
139 KOG1516 Carboxylesterase and r 22.5 1.3E+02 0.0028 27.2 4.2 45 21-70 169-214 (545)
140 PF09752 DUF2048: Uncharacteri 22.5 1.5E+02 0.0032 25.5 4.2 20 52-71 176-195 (348)
141 TIGR01249 pro_imino_pep_1 prol 22.1 62 0.0013 26.7 1.9 18 54-71 98-115 (306)
142 PRK05077 frsA fermentation/res 21.9 2E+02 0.0043 25.2 5.1 18 54-71 268-285 (414)
143 TIGR03101 hydr2_PEP hydrolase, 21.8 64 0.0014 26.5 1.9 18 54-71 102-119 (266)
144 PF08840 BAAT_C: BAAT / Acyl-C 21.6 63 0.0014 25.3 1.8 18 54-71 25-42 (213)
145 PLN02847 triacylglycerol lipas 21.5 60 0.0013 30.0 1.8 17 54-70 254-270 (633)
146 PRK10985 putative hydrolase; P 21.4 1.1E+02 0.0024 25.5 3.4 17 53-69 133-149 (324)
147 KOG3456 NADH:ubiquinone oxidor 20.6 59 0.0013 22.7 1.2 20 2-21 68-87 (120)
148 PLN02578 hydrolase 20.4 70 0.0015 27.1 1.9 19 53-71 154-172 (354)
149 PLN02652 hydrolase; alpha/beta 20.1 71 0.0015 27.8 2.0 17 54-70 211-227 (395)
No 1
>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants. Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates.
Probab=100.00 E-value=6.1e-50 Score=338.18 Aligned_cols=210 Identities=63% Similarity=1.036 Sum_probs=181.2
Q ss_pred CCeEEEEEeeCCchhhHHHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHH
Q 027406 9 GKKITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFY 88 (223)
Q Consensus 9 ~~~~~~L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~ 88 (223)
++++|||||||||+||+++++||++||+++++..|++.++.++||+|+|||+|||+|++|+.+...++|+++++|+.++|
T Consensus 1 ~~~~rILslDGGGiRGi~~a~iL~~lE~~l~~~~g~~~~i~~~FDliaGTStGgiiA~~la~~~~~~~p~~~~~e~~~~y 80 (349)
T cd07214 1 GKFITVLSIDGGGIRGIIPATILEFLEGKLQELDGPDARIADYFDVIAGTSTGGLITAMLTAPNENKRPLFAAKDIVQFY 80 (349)
T ss_pred CCceEEEEECCCchhhHHHHHHHHHHHHHHHHhcCCCCCHhHhCCEEeeCCHHHHHHHHHhcCCCCCCCccCHHHHHHHH
Confidence 46799999999999999999999999999987777778899999999999999999999999877789999999999999
Q ss_pred HhhCCcccCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccccccccCceEEEeeeCCCCcceeecCCCccC
Q 027406 89 FEHCPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDVKK 168 (223)
Q Consensus 89 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~d~~~~~~v~a~d~~~~~~~~f~~~~~~~ 168 (223)
.+.+.++|.+..+ .+..+.+.++.+.+++|+++.|+++|+++|++.++.|+.++++|+|+|+.+++|++|++|+...
T Consensus 81 ~~~~~~iF~~~~~---~~~~~~~~~~~~~~~~y~~~~L~~~L~~~~gd~~l~d~~~~v~I~a~dl~~~~p~~F~~~~~~~ 157 (349)
T cd07214 81 LENGPKIFPQSTG---QFEDDRKKLRSLLGPKYDGVYLHDLLNELLGDTRLSDTLTNVVIPTFDIKLLQPVIFSSSKAKN 157 (349)
T ss_pred HHhhHHhcCCCcc---cchhHHHHHHHhccCccCcHHHHHHHHHHhccccHhhhCCceEEEeEECCCCCeEEEeCccccC
Confidence 9999999987653 1112233344556789999999999999999999999999999999999999999999998766
Q ss_pred CCCCCchHHHHHHhhccCCCCCCceeeeccCCCCCCcccceeeeeeeccCCCCC
Q 027406 169 GALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPVI 222 (223)
Q Consensus 169 ~~~~~~~l~~av~AS~A~P~~F~p~~i~~~~~~~G~~~~~~~iDGG~~~N~P~l 222 (223)
+...+.++|||++||||+|+||||+.+.+.+. .|..+++.|+|||+.+|||++
T Consensus 158 ~~~~~~~l~da~rASSAaPtyFpp~~i~~~~~-~g~~~~~~~vDGGv~aNNP~~ 210 (349)
T cd07214 158 DKLTNARLADVCISTSAAPTYFPAHYFTTEDS-NGDIREFNLVDGGVAANNPTL 210 (349)
T ss_pred CcccCcCHHHHHHHhcccccccCCeEeecccC-CCCcceEEEecCceecCCHHH
Confidence 66678999999999999999999999874321 122234579999999999975
No 2
>cd07215 Pat17_PNPLA8_PNPLA9_like2 Patatin-like phospholipase of bacteria. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=100.00 E-value=2.6e-46 Score=314.75 Aligned_cols=199 Identities=39% Similarity=0.670 Sum_probs=171.0
Q ss_pred EEEEeeCCchhhHHHHHHHHHHHHHhhccCCC-CCccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHHHhh
Q 027406 13 TVLSIDGGGVKGIIPGTILAFLESRLQDLDGP-NARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEH 91 (223)
Q Consensus 13 ~~L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~-~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~ 91 (223)
|||||||||+||++++++|++||+++++..|. ++++.++||+|+|||+|||+|++++.+..++++.++++++.++|.+.
T Consensus 1 rILslDGGGirG~~~~~iL~~le~~l~~~~g~~~~~i~~~fDli~GTStGgiia~~l~~~~~~g~~~~s~~e~~~~y~~~ 80 (329)
T cd07215 1 RILSIDGGGIRGIIPATILVSVEEKLQKKTGNPEARLADYFDLVAGTSTGGILTCLYLCPNESGRPKFSAKEALNFYLER 80 (329)
T ss_pred CEEEEcCChHHHHHHHHHHHHHHHHHhhhcCCCCCcHhhccCeeeccCHHHHHHHHHhCCCCCCCCCcCHHHHHHHHHHh
Confidence 69999999999999999999999998765543 46899999999999999999999887666678889999999999999
Q ss_pred CCcccCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccccccccCceEEEeeeCCCCcceeecCCCccCCCC
Q 027406 92 CPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDVKKGAL 171 (223)
Q Consensus 92 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~d~~~~~~v~a~d~~~~~~~~f~~~~~~~~~~ 171 (223)
+.++|....+. .+ .....+.++.|+.+.|+++|+++|++.+|.|+.++++|+++|+.++++++|+++....++.
T Consensus 81 ~~~IF~~~~~~--~~----~~~~~~~~~~y~~~~L~~~L~~~fg~~~l~d~~~~~~i~a~d~~~~~~~~f~~~~~~~~~~ 154 (329)
T cd07215 81 GNYIFKKKIWN--KI----KSRGGFLNEKYSHKPLEEVLLEYFGDTKLSELLKPCLITSYDIERRSPHFFKSHTAIKNEQ 154 (329)
T ss_pred hHhhcccchhh--hh----hhhccccccccCcHHHHHHHHHHhCCCchhhhcCCceEEeeecCCCCceEecCcccCCCcc
Confidence 99999875431 11 1123456789999999999999999999999999999999999999999999987654456
Q ss_pred CCchHHHHHHhhccCCCCCCceeeeccCCCCCCcccceeeeeeeccCCCCC
Q 027406 172 KNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPVI 222 (223)
Q Consensus 172 ~~~~l~~av~AS~A~P~~F~p~~i~~~~~~~G~~~~~~~iDGG~~~N~P~l 222 (223)
.+.++|||++||||+|+||||+.+++.+ | +++.|+|||+.+|||++
T Consensus 155 ~~~~l~da~~ASsAaP~~F~p~~i~~~~---g--~~~~~vDGGv~aNnP~~ 200 (329)
T cd07215 155 RDFYVRDVARATSAAPTYFEPARIHSLT---G--EKYTLIDGGVFANNPTL 200 (329)
T ss_pred cCccHHHHhHHHhhcccccCceEeecCC---C--cEEEEecCceecCCHHH
Confidence 7889999999999999999999987531 2 23469999999999985
No 3
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=100.00 E-value=2.4e-44 Score=300.67 Aligned_cols=190 Identities=25% Similarity=0.378 Sum_probs=157.2
Q ss_pred CCCCCCeEEEEEeeCCchhhHHHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHH
Q 027406 5 TIAKGKKITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDI 84 (223)
Q Consensus 5 ~~~~~~~~~~L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~ 84 (223)
||++++++|||||||||+||++++++|++||++++ .++++.||+|+|||+|||+|++|+... ++++|+
T Consensus 1 ~~~~~~~~riLsLdGGGirG~~~~~vL~~Le~~~~------~~i~~~fDli~GTStGgiiA~~la~~~------~~~~e~ 68 (308)
T cd07211 1 PPVKGRGIRILSIDGGGTRGVVALEILRKIEKLTG------KPIHELFDYICGVSTGAILAFLLGLKK------MSLDEC 68 (308)
T ss_pred CCCCCCCcEEEEECCChHHHHHHHHHHHHHHHHhC------CCchhhcCEEEecChhHHHHHHHhccc------ccHHHH
Confidence 78999999999999999999999999999999864 368899999999999999999999753 899999
Q ss_pred HHHHHhhCCcccCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhccccccccc-----CceEEEeee--CCCCc
Q 027406 85 NNFYFEHCPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTL-----TNLIIPTFD--IKRLQ 157 (223)
Q Consensus 85 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~d~~-----~~~~v~a~d--~~~~~ 157 (223)
.++|.++..++|....+. ... .++ .+..+.|+.+.++++|+++|++.++.+.. .+++|++++ ..+.+
T Consensus 69 ~~~y~~~~~~iF~~~~~~---~~~-~~~--~~~~~~y~~~~l~~~l~~~~g~~~l~~~~~~~~~p~~~v~st~~~~~~~~ 142 (308)
T cd07211 69 EELYRKLGKDVFSQNTYI---SGT-SRL--VLSHAYYDTETWEKILKEMMGSDELIDTSADPNCPKVACVSTQVNRTPLK 142 (308)
T ss_pred HHHHHHHHHHhcCCCccc---cch-hhh--hccCCccChHHHHHHHHHHhCCccccccccCCCCCEEEEEEEeccCCCCc
Confidence 999999999999876521 100 011 23467899999999999999998877642 245666664 45678
Q ss_pred ceeecCCCccCCC------CCCchHHHHHHhhccCCCCCCceeeeccCCCCCCcccceeeeeeeccCCCCC
Q 027406 158 PVIFSSNDVKKGA------LKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPVI 222 (223)
Q Consensus 158 ~~~f~~~~~~~~~------~~~~~l~~av~AS~A~P~~F~p~~i~~~~~~~G~~~~~~~iDGG~~~N~P~l 222 (223)
+++|++|+.+.+. ..+.++|+|+|||||+|+||||+.+++. .|+|||+.+|||++
T Consensus 143 p~~f~ny~~~~~~~~~~~~~~~~~l~dA~rASsAaP~~F~p~~i~~~----------~~vDGGv~aNnP~~ 203 (308)
T cd07211 143 PYVFRNYNHPPGTRSHYLGSCKHKLWEAIRASSAAPGYFEEFKLGNN----------LHQDGGLLANNPTA 203 (308)
T ss_pred eEEEeCCCCCCCcccccCCcccccHHHHHHHhccchhcCCcEEECCC----------eEEECCcccCCcHH
Confidence 9999999865432 3468999999999999999999998743 89999999999974
No 4
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=100.00 E-value=2.8e-43 Score=296.03 Aligned_cols=192 Identities=27% Similarity=0.438 Sum_probs=155.4
Q ss_pred EEEEEeeCCchhhHHHHHHHHHHHHHhhccCC-CCCccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHHHh
Q 027406 12 ITVLSIDGGGVKGIIPGTILAFLESRLQDLDG-PNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFE 90 (223)
Q Consensus 12 ~~~L~LdGGG~rG~~~~gvL~~L~~~~~~~~g-~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~ 90 (223)
+|||||||||+||+++++||++||+++++..+ ++++++++||+|+|||+|||+|++++.+ ++++|+.++|.+
T Consensus 1 ~rILsLDGGGiRGi~~~gvL~~LE~~l~~~~~~p~~~l~d~FDlIaGTStGgIIAa~la~g-------~s~~ei~~~y~~ 73 (344)
T cd07217 1 KKILALDGGGIRGLLSVEILGRIEKDLRTHLDDPEFRLGDYFDFVGGTSTGSIIAACIALG-------MSVTDLLSFYTL 73 (344)
T ss_pred CEEEEEcCCHHHHHHHHHHHHHHHHHhhhccCCccccccccccEEEEecHHHHHHHHHHcC-------CCHHHHHHHHHh
Confidence 47999999999999999999999998865333 3567899999999999999999999987 899999999999
Q ss_pred hCCcccCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccccccc--cCceEEEeeeCCCCcceeecCCCcc-
Q 027406 91 HCPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDT--LTNLIIPTFDIKRLQPVIFSSNDVK- 167 (223)
Q Consensus 91 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~d~--~~~~~v~a~d~~~~~~~~f~~~~~~- 167 (223)
...++|....+ .. .+......+.|+.+.|+++|+++|++.+|.|. .++++|+++|+.++++++|+++...
T Consensus 74 ~~~~iF~~~~~----~~---~l~~~~~~~~y~~~~L~~~L~~~fg~~~l~d~~~~~~l~i~a~dl~tg~p~~f~~~~~~~ 146 (344)
T cd07217 74 NGVNMFDKAWL----AQ---RLFLNKLYNQYDPTNLGKKLNTVFPETTLGDDTLRTLLMIVTRNATTGSPWPVCNNPEAK 146 (344)
T ss_pred hhhhhcCchhh----hh---hccccccccccCcHHHHHHHHHHcCceeecccccCceEEEEEEecCCCCeeEeecCchhh
Confidence 99999987542 10 00001112459999999999999999999874 4679999999999999999986421
Q ss_pred ------CCCCCCchHHHHHHhhccCCCCCCceeeeccCCCCCCcccceeeeeeec-cCCCCC
Q 027406 168 ------KGALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVA-ANDPVI 222 (223)
Q Consensus 168 ------~~~~~~~~l~~av~AS~A~P~~F~p~~i~~~~~~~G~~~~~~~iDGG~~-~N~P~l 222 (223)
.+...+.++|||+|||||+|+||||+.+...+ | +++.|||||+. .|||++
T Consensus 147 ~~~~~~~~~~~~~~L~da~rASsAaPt~FpP~~i~~~~---~--~~~~lVDGGv~aaNNP~l 203 (344)
T cd07217 147 YNDSDRSDCNLDLPLWQLVRASTAAPTFFPPEVVSIAP---G--TAFVFVDGGVTTYNNPAF 203 (344)
T ss_pred cccccccCcccCCcHHHHHHHHccCccccCceEEEecC---C--ceEEEECCccccccCHHH
Confidence 11245789999999999999999999875321 1 13589999998 699984
No 5
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=100.00 E-value=7.9e-43 Score=291.49 Aligned_cols=190 Identities=28% Similarity=0.424 Sum_probs=156.3
Q ss_pred EEEEEeeCCchhhHHHHHHHHHHHHHhhccCC--CCCccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHHH
Q 027406 12 ITVLSIDGGGVKGIIPGTILAFLESRLQDLDG--PNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYF 89 (223)
Q Consensus 12 ~~~L~LdGGG~rG~~~~gvL~~L~~~~~~~~g--~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~ 89 (223)
+|||||||||+||++++++|++||+++.+..| +.++++++||+|+|||+|||+|++|+.. +++++||.++|.
T Consensus 1 ~rILslDGGGiRGl~~~~iL~~le~~l~~~~~~~~~~~~~~~fDli~GTStGgiiA~~l~~~------~~t~~e~~~~y~ 74 (309)
T cd07216 1 LNLLSLDGGGVRGLSSLLILKEIMERIDPKEGLDEPPKPCDYFDLIGGTSTGGLIAIMLGRL------RMTVDECIDAYT 74 (309)
T ss_pred CcEEEEcCCchhHHHHHHHHHHHHHHhhhccccCCCCChhHhcCeeeeccHHHHHHHHhccc------CCCHHHHHHHHH
Confidence 48999999999999999999999999865332 2457899999999999999999999843 389999999999
Q ss_pred hhCCcccCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccccc---------cccCceEEEeeeCC-CCcce
Q 027406 90 EHCPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIK---------DTLTNLIIPTFDIK-RLQPV 159 (223)
Q Consensus 90 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~---------d~~~~~~v~a~d~~-~~~~~ 159 (223)
++++++|....+. .. ....+.++.||.+.+++.+++++++..+. +..++++|++|+.. +++++
T Consensus 75 ~~~~~iF~~~~~~--~~-----~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~~~~~~~~ 147 (309)
T cd07216 75 RLAKKIFSRKRLR--LI-----IGDLRTGARFDSKKLAEAIKVILKELGNDEDDLLDEGEEDGCKVFVCATDKDVTGKAV 147 (309)
T ss_pred HHhHHhCCCCCcc--cc-----ccccccCCCCChHHHHHHHHHHHHhcCCCchhhhccccccCCCEEEEEEeeCCCCceE
Confidence 9999999886542 10 01123456799999999999999865443 23568999999998 99999
Q ss_pred eecCCCccCCC--CCCchHHHHHHhhccCCCCCCceeeeccCCCCCCcccceeeeeeeccCCCCC
Q 027406 160 IFSSNDVKKGA--LKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPVI 222 (223)
Q Consensus 160 ~f~~~~~~~~~--~~~~~l~~av~AS~A~P~~F~p~~i~~~~~~~G~~~~~~~iDGG~~~N~P~l 222 (223)
+|++|+..... ..+..+|+|++||||+|+||+|+++.+. ...|+|||+.+|||++
T Consensus 148 ~f~~y~~~~~~~~~~~~~l~~a~rASsAaP~~f~p~~~~~~--------~~~~vDGGv~~NnP~~ 204 (309)
T cd07216 148 RLRSYPSKDEPSLYKNATIWEAARATSAAPTFFDPVKIGPG--------GRTFVDGGLGANNPIR 204 (309)
T ss_pred EEecCCCCCCCCcccCccHHHHHHHHhhhHhhCCCEEecCC--------CceEecCCcccCCcHH
Confidence 99999865432 6789999999999999999999998411 2389999999999974
No 6
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=100.00 E-value=6.5e-41 Score=279.09 Aligned_cols=163 Identities=25% Similarity=0.428 Sum_probs=139.5
Q ss_pred EEEeeCCchhhHHHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHHHhhCC
Q 027406 14 VLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHCP 93 (223)
Q Consensus 14 ~L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~~~ 93 (223)
||||||||+||+++++||++||++++ .++++.||+|+|||+|||+|++++.+ ++++||.++|.++.+
T Consensus 1 ILsLDGGG~RGl~~i~vL~~le~~~g------~~i~~~fD~i~GTStGgiIA~~la~g-------~s~~e~~~~y~~~~~ 67 (312)
T cd07212 1 LLCLDGGGIRGLVLIQMLIAIEKALG------RPIRELFDWIAGTSTGGILALALLHG-------KSLREARRLYLRMKD 67 (312)
T ss_pred CEEECCcHHHHHHHHHHHHHHHHHhC------CCchhhccEEEeeChHHHHHHHHHcC-------CCHHHHHHHHHHhhh
Confidence 69999999999999999999999764 36889999999999999999999986 899999999999998
Q ss_pred cccCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhccc-ccccccCceEEEeeeCCC---CcceeecCCCccCC
Q 027406 94 KIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDI-TIKDTLTNLIIPTFDIKR---LQPVIFSSNDVKKG 169 (223)
Q Consensus 94 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~l~d~~~~~~v~a~d~~~---~~~~~f~~~~~~~~ 169 (223)
++|... ..|++++++++|+++||+. ++.|...+.++++++..+ .++++|+||+.+.+
T Consensus 68 ~iF~~~-------------------~~y~~~~le~~L~~~~g~~~~l~d~~~p~~~v~~~~~~~~~~~~~~f~ny~~~~~ 128 (312)
T cd07212 68 RVFDGS-------------------RPYNSEPLEEFLKREFGEDTKMTDVKYPRLMVTGVLADRQPVQLHLFRNYDPPED 128 (312)
T ss_pred hhCCCC-------------------CCCCChHHHHHHHHHHCcCccccccCCCeEEEEeEeccCCCcCceeeecCCCCCC
Confidence 888653 2589999999999999987 788877765555555544 44599999986532
Q ss_pred C--------------CCCchHHHHHHhhccCCCCCCceeeeccCCCCCCcccceeeeeeeccCCCCC
Q 027406 170 A--------------LKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPVI 222 (223)
Q Consensus 170 ~--------------~~~~~l~~av~AS~A~P~~F~p~~i~~~~~~~G~~~~~~~iDGG~~~N~P~l 222 (223)
. ..+.++|+|+|||+|+|+||+|+ + .|+|||+.+|||++
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~l~~a~rASsAaP~~F~p~--~------------~~vDGGv~~NnP~~ 181 (312)
T cd07212 129 VEEPEKNANFLPPTDPAEQLLWRAARSSGAAPTYFRPM--G------------RFLDGGLIANNPTL 181 (312)
T ss_pred chhccccccccccCCcccccHHHHHHhhcccccccccc--c------------ceecCceeccChHH
Confidence 2 24689999999999999999998 2 58999999999985
No 7
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=100.00 E-value=2.6e-40 Score=273.71 Aligned_cols=171 Identities=32% Similarity=0.574 Sum_probs=146.0
Q ss_pred eEEEEEeeCCchhhHHHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHHHh
Q 027406 11 KITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFE 90 (223)
Q Consensus 11 ~~~~L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~ 90 (223)
++|||||||||+||++++++|++||++. .++.+.||+|+|||+|||+|++++.+ ++++++.++|.+
T Consensus 1 ~~riLsLdGGG~RGi~~~~vL~~Le~~~-------~~~~~~fD~i~GTSaGaiia~~la~g-------~~~~e~~~~~~~ 66 (288)
T cd07213 1 KYRILSLDGGGVKGIVQLVLLKRLAEEF-------PSFLDQIDLFAGTSAGSLIALGLALG-------YSPRQVLKLYEE 66 (288)
T ss_pred CeEEEEECCCcHHHHHHHHHHHHHHHhC-------cccccceeEEEEeCHHHHHHHHHHcC-------cCHHHHHHHHHH
Confidence 5799999999999999999999999974 25778999999999999999999987 689999999999
Q ss_pred hCCcccCCCccCCchhHHHHhhhccccccCCChH-HHHHHHHHHhcccccccccCceEEEeeeCCCCc--------ceee
Q 027406 91 HCPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGK-YIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQ--------PVIF 161 (223)
Q Consensus 91 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~~~~~~l~d~~~~~~v~a~d~~~~~--------~~~f 161 (223)
...++|...... ..+....|..+ .+++++++.|++.+|.|+.++++|+++|+.+++ +++|
T Consensus 67 ~~~~iF~~~~~~-----------~~~~~~~~~~~~~l~~~l~~~~~~~~l~d~~~~~~i~a~~~~~~~~~~~~~~~~~~f 135 (288)
T cd07213 67 VGLKVFSKSSAG-----------GGAGNNQYFAAGFLKAFAEVFFGDLTLGDLKRKVLVPSFQLDSGKDDPNRRWKPKLF 135 (288)
T ss_pred hCccccCCCccc-----------cccccccCCchHHHHHHHHHHhCcCCHhhcCCCEEEEEEeccCCCCCccccccceEe
Confidence 999999875421 01122334444 899999999999999999999999999999886 6899
Q ss_pred cCCCccCCCCCCchHHHHHHhhccCCCCCCceeeeccCCCCCCcccceeeeeeeccCCCCC
Q 027406 162 SSNDVKKGALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPVI 222 (223)
Q Consensus 162 ~~~~~~~~~~~~~~l~~av~AS~A~P~~F~p~~i~~~~~~~G~~~~~~~iDGG~~~N~P~l 222 (223)
+|+... ...+.++|||++||||+|+||||+. .|+|||+.+|||++
T Consensus 136 ~n~~~~--~~~~~~l~d~~~ASsAaP~~F~p~~--------------~~iDGGv~~NnP~~ 180 (288)
T cd07213 136 HNFPGE--PDLDELLVDVCLRSSAAPTYFPSYQ--------------GYVDGGVFANNPSL 180 (288)
T ss_pred ecCCCC--CCccccHHHHHHHhccccccchhhh--------------ceecceeecCChHH
Confidence 887642 2457899999999999999999982 69999999999975
No 8
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=100.00 E-value=4.7e-38 Score=246.40 Aligned_cols=171 Identities=26% Similarity=0.321 Sum_probs=138.4
Q ss_pred EEeeCCchhhHHHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHHHhhCCc
Q 027406 15 LSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHCPK 94 (223)
Q Consensus 15 L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~~~~ 94 (223)
|||+|||+||++++|||++|+|+ ...||+|+|||+||++|++++++ ++.+++.+++.....+
T Consensus 2 Lvl~GGG~rG~~~~Gvl~~L~e~-----------~~~~d~i~GtSaGai~aa~~a~g-------~~~~~~~~~~~~~~~~ 63 (194)
T cd07207 2 LVFEGGGAKGIAYIGALKALEEA-----------GILKKRVAGTSAGAITAALLALG-------YSAADIKDILKETDFA 63 (194)
T ss_pred eEEcCchHHHHHHHHHHHHHHHc-----------CCCcceEEEECHHHHHHHHHHcC-------CCHHHHHHHHHhCCHH
Confidence 89999999999999999999985 23479999999999999999998 6889999999887655
Q ss_pred ccCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhccccc------------ccccCceEEEeeeCCCCcceeec
Q 027406 95 IFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITI------------KDTLTNLIIPTFDIKRLQPVIFS 162 (223)
Q Consensus 95 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l------------~d~~~~~~v~a~d~~~~~~~~f~ 162 (223)
.|..... .....+..++. .++.|+.+.+++.+++.+++..+ .+..+++.|++||+.++++++|+
T Consensus 64 ~~~~~~~--~~~~~~~~~~~--~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~I~atd~~tg~~~~f~ 139 (194)
T cd07207 64 KLLDSPV--GLLFLLPSLFK--EGGLYKGDALEEWLRELLKEKTGNSFATSLLRDLDDDLGKDLKVVATDLTTGALVVFS 139 (194)
T ss_pred HHhccch--hhhHHHHHHHh--hcCCccHHHHHHHHHHHHHhccCCcccchhhhhhccccCCcEEEEEEECCCCCEEEec
Confidence 5533221 11111222211 35679999999999999987655 56778999999999999999997
Q ss_pred CCCccCCCCCCchHHHHHHhhccCCCCCCceeee-ccCCCCCCcccceeeeeeeccCCCCC
Q 027406 163 SNDVKKGALKNARLADICVGTSAAPTYLPAHHFV-TKDSTTGDTCSFDLIDGGVAANDPVI 222 (223)
Q Consensus 163 ~~~~~~~~~~~~~l~~av~AS~A~P~~F~p~~i~-~~~~~~G~~~~~~~iDGG~~~N~P~l 222 (223)
.... ++..+|+|++||||+|++|||++++ +. .|+|||+.+|+|+.
T Consensus 140 ~~~~-----~~~~l~~av~AS~AiP~~f~pv~i~~g~----------~~vDGG~~~n~Pv~ 185 (194)
T cd07207 140 AETT-----PDMPVAKAVRASMSIPFVFKPVRLAKGD----------VYVDGGVLDNYPVW 185 (194)
T ss_pred CCCC-----CcccHHHHHHHHcCCCcccccEEeCCCe----------EEEeCccccCCCch
Confidence 6432 3568999999999999999999997 43 89999999999973
No 9
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=100.00 E-value=1.4e-37 Score=239.98 Aligned_cols=158 Identities=26% Similarity=0.366 Sum_probs=135.2
Q ss_pred EEEeeCCchhhHHHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHHHhhCC
Q 027406 14 VLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHCP 93 (223)
Q Consensus 14 ~L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~~~ 93 (223)
.|+|+|||+||++++|||++|+++ ...||+|+|||+||++|++++.+ ++.+++.+.|.+...
T Consensus 2 ~Lvl~GGG~rG~~~~Gvl~~L~~~-----------~~~~d~i~GtSaGal~a~~~a~g-------~~~~~~~~~~~~~~~ 63 (175)
T cd07205 2 GLALSGGGARGLAHIGVLKALEEA-----------GIPIDIVSGTSAGAIVGALYAAG-------YSPEEIEERAKLRST 63 (175)
T ss_pred eEEEeChhHHHHHHHHHHHHHHHc-----------CCCeeEEEEECHHHHHHHHHHcC-------CCHHHHHHHHHhhcc
Confidence 599999999999999999999984 23599999999999999999988 678899988876544
Q ss_pred cccCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccccccccCceEEEeeeCCCCcceeecCCCccCCCCCC
Q 027406 94 KIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDVKKGALKN 173 (223)
Q Consensus 94 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~d~~~~~~v~a~d~~~~~~~~f~~~~~~~~~~~~ 173 (223)
..+....+ .....+.|+.+.+++.+++.+++.++++...++.|++||+.++++++|++
T Consensus 64 ~~~~~~~~------------~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~i~a~~l~~g~~~~f~~---------- 121 (175)
T cd07205 64 DLKALSDL------------TIPTAGLLRGDKFLELLDEYFGDRDIEDLWIPFFIVATDLTSGKLVVFRS---------- 121 (175)
T ss_pred chhhhhcc------------ccccccccChHHHHHHHHHHcCCCcHHHCCCCEEEEEEECCCCCEEEEcC----------
Confidence 43322211 11235679999999999999999999999999999999999999999965
Q ss_pred chHHHHHHhhccCCCCCCceeeeccCCCCCCcccceeeeeeeccCCCC
Q 027406 174 ARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPV 221 (223)
Q Consensus 174 ~~l~~av~AS~A~P~~F~p~~i~~~~~~~G~~~~~~~iDGG~~~N~P~ 221 (223)
..+|+|++||||+|++|||++++++ .|+|||+.+|+|+
T Consensus 122 ~~l~~av~AS~a~P~~f~pv~~~g~----------~~~DGG~~~n~P~ 159 (175)
T cd07205 122 GSLVRAVRASMSIPGIFPPVKIDGQ----------LLVDGGVLNNLPV 159 (175)
T ss_pred CCHHHHHHHHcccccccCCEEECCE----------EEEeccCcCCccH
Confidence 3599999999999999999999754 8999999999996
No 10
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=100.00 E-value=2.9e-36 Score=232.57 Aligned_cols=157 Identities=24% Similarity=0.308 Sum_probs=126.7
Q ss_pred EEEeeCCchhhHHHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHHHhhC-
Q 027406 14 VLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHC- 92 (223)
Q Consensus 14 ~L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~~- 92 (223)
.|+|+|||+||++|+|||++|+|+ ...||+|+|||+||++|++++.+ ++.+++.+. .+..
T Consensus 2 ~LvL~GGG~rG~~~~Gvl~~L~e~-----------g~~~d~i~GtSaGAi~aa~~a~g-------~~~~~~~~~-~~~~~ 62 (175)
T cd07228 2 GLALGSGGARGWAHIGVLRALEEE-----------GIEIDIIAGSSIGALVGALYAAG-------HLDALEEWV-RSLSQ 62 (175)
T ss_pred EEEecCcHHHHHHHHHHHHHHHHC-----------CCCeeEEEEeCHHHHHHHHHHcC-------CCHHHHHHH-HhhhH
Confidence 699999999999999999999885 23599999999999999999988 344444332 2111
Q ss_pred CcccCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccccccccCceEEEeeeCCCCcceeecCCCccCCCCC
Q 027406 93 PKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDVKKGALK 172 (223)
Q Consensus 93 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~d~~~~~~v~a~d~~~~~~~~f~~~~~~~~~~~ 172 (223)
.+.+.... +.....+.++.+++++.|++.+++.++++..+++.|++||+.++++++|++
T Consensus 63 ~~~~~~~~------------~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~i~at~~~tg~~~~f~~--------- 121 (175)
T cd07228 63 RDVLRLLD------------LSASRSGLLKGEKVLEYLREIMGGVTIEELPIPFAAVATDLQTGKEVWFRE--------- 121 (175)
T ss_pred HHHHhhcc------------cCCCcccccCHHHHHHHHHHHcCCCCHHHCCCCEEEEEEECCCCCEEEECC---------
Confidence 11110000 001134678999999999999999999999999999999999999999975
Q ss_pred CchHHHHHHhhccCCCCCCceeeeccCCCCCCcccceeeeeeeccCCCC
Q 027406 173 NARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPV 221 (223)
Q Consensus 173 ~~~l~~av~AS~A~P~~F~p~~i~~~~~~~G~~~~~~~iDGG~~~N~P~ 221 (223)
..+++|++||||+|++|||+.+++. .|+|||+.+|.|+
T Consensus 122 -~~l~~av~AS~a~P~~f~p~~~~g~----------~~vDGG~~~~~P~ 159 (175)
T cd07228 122 -GSLIDAIRASISIPGIFAPVEHNGR----------LLVDGGVVNPIPV 159 (175)
T ss_pred -CCHHHHHHHHcccCccccCEEECCE----------EEEeccCcCCCcH
Confidence 2499999999999999999999744 8999999999996
No 11
>KOG4231 consensus Intracellular membrane-bound Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=100.00 E-value=2.5e-37 Score=260.54 Aligned_cols=187 Identities=25% Similarity=0.393 Sum_probs=156.1
Q ss_pred CCCCCeEEEEEeeCCchhhHHHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHH
Q 027406 6 IAKGKKITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDIN 85 (223)
Q Consensus 6 ~~~~~~~~~L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~ 85 (223)
|.+++++|||++||||.||++.+.+|+.||+.-++ ++++.||+|||+|+|||+|++|.... |+.+||+
T Consensus 411 ~vkg~G~rILSiDGGGtrG~~~lqiL~kieklsgK------pIheLFD~ICGvSTG~ilA~~Lg~k~------m~l~eCe 478 (763)
T KOG4231|consen 411 QVKGQGLRILSIDGGGTRGLATLQILKKIEKLSGK------PIHELFDLICGVSTGGILAIALGVKL------MTLEECE 478 (763)
T ss_pred ccCCCceEEEEecCCCccchhHHHHHHHHHHhcCC------cHHHHHHHHhccCchHHHHHHHHhcC------ccHHHHH
Confidence 56888999999999999999999999999986443 78999999999999999999999875 9999999
Q ss_pred HHHHhhCCcccCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccc-cccc-----cCceEEEeeeC---CCC
Q 027406 86 NFYFEHCPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDIT-IKDT-----LTNLIIPTFDI---KRL 156 (223)
Q Consensus 86 ~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-l~d~-----~~~~~v~a~d~---~~~ 156 (223)
+.|.++++.+|...... +. .-..|.++.|+++.++.+|++.+|+.. |-.+ ..++++++|=+ -|-
T Consensus 479 EiY~~lgk~vFsq~v~~----g~---~~~sw~Hs~y~~n~we~iLKem~ged~~mi~tsr~~~~PkvavVStiVn~~pT~ 551 (763)
T KOG4231|consen 479 EIYKNLGKLVFSQSVPK----GN---EAASWIHSKYSANEWERILKEMCGEDGDMIITSRVKNVPKVAVVSTIVNVMPTA 551 (763)
T ss_pred HHHHHHhHHHhhccccc----cc---hhheehhhhcchHHHHHHHHHHhhhhhhHHHhhccCCCCceeehhhhhhcCCCc
Confidence 99999999999986532 11 112346689999999999999999543 4332 24677776643 468
Q ss_pred cceeecCCCccCCC------CCCchHHHHHHhhccCCCCCCceeeeccCCCCCCcccceeeeeeeccCCCC
Q 027406 157 QPVIFSSNDVKKGA------LKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPV 221 (223)
Q Consensus 157 ~~~~f~~~~~~~~~------~~~~~l~~av~AS~A~P~~F~p~~i~~~~~~~G~~~~~~~iDGG~~~N~P~ 221 (223)
+|++|+||.++... ..+..+|+|+|||+|+|.||..+.+++. .+.|||+++|||+
T Consensus 552 qpfIFRNY~hp~G~~Shy~Ggc~h~~WqAIrASsAAP~Yf~e~~lgn~----------l~QDGgi~aNNPt 612 (763)
T KOG4231|consen 552 QPFIFRNYQHPVGTQSHYMGGCKHQVWQAIRASSAAPYYFDEFSLGNY----------LWQDGGIVANNPT 612 (763)
T ss_pred cceeeeccCCCCCcchhhcccchHHHHHHHHhcccCCcchhhhccccc----------eeccCcEeecCcc
Confidence 99999999987532 4567899999999999999999999753 8999999999997
No 12
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=100.00 E-value=5.3e-36 Score=238.56 Aligned_cols=158 Identities=19% Similarity=0.244 Sum_probs=134.5
Q ss_pred EEEeeCCchhhHHHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHHHhhCC
Q 027406 14 VLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHCP 93 (223)
Q Consensus 14 ~L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~~~ 93 (223)
.|||+|||+||++|+|||++|+|+ ...+|.|+|||+||++|++++++ ++.+++.+.|.+...
T Consensus 2 ~LvL~GGG~rG~~~~GvL~aL~e~-----------gi~~~~i~GtSaGAi~aa~~a~g-------~~~~~~~~~~~~~~~ 63 (221)
T cd07210 2 ALVLSSGFFGFYAHLGFLAALLEM-----------GLEPSAISGTSAGALVGGLFASG-------ISPDEMAELLLSLER 63 (221)
T ss_pred eEEEcChHHHHHHHHHHHHHHHHc-----------CCCceEEEEeCHHHHHHHHHHcC-------CCHHHHHHHHHhcCH
Confidence 599999999999999999999985 23589999999999999999988 678899888876533
Q ss_pred cccCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccccccccCceEEEeeeCCCCcceeecCCCccCCCCCC
Q 027406 94 KIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDVKKGALKN 173 (223)
Q Consensus 94 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~d~~~~~~v~a~d~~~~~~~~f~~~~~~~~~~~~ 173 (223)
+.|.... ......+.|+.+.+++.+++.+++.+++++..++.|++||+.++++++|++.
T Consensus 64 ~~~~~~~------------~~~~~~g~~~~~~l~~~l~~~l~~~~~~~~~~~l~i~atdl~tg~~~~f~~~--------- 122 (221)
T cd07210 64 KDFWMFW------------DPPLRGGLLSGDRFAALLREHLPPDRFEELRIPLAVSVVDLTSRETLLLSEG--------- 122 (221)
T ss_pred HHHhhhc------------cccCCccccChHHHHHHHHHHcCCCCHHHCCCCeEEEEEECCCCCEEEECCC---------
Confidence 2221000 0112456899999999999999999999999999999999999999999763
Q ss_pred chHHHHHHhhccCCCCCCceeeeccCCCCCCcccceeeeeeeccCCCC
Q 027406 174 ARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPV 221 (223)
Q Consensus 174 ~~l~~av~AS~A~P~~F~p~~i~~~~~~~G~~~~~~~iDGG~~~N~P~ 221 (223)
.+++|++||||+|++|+|+.+++. .|+|||+.+|+|+
T Consensus 123 -~l~~av~AS~aiP~~f~Pv~i~g~----------~~vDGGv~~n~Pi 159 (221)
T cd07210 123 -DLAEAVAASCAVPPLFQPVEIGGR----------PFVDGGVADRLPF 159 (221)
T ss_pred -CHHHHHHHHcccccccCCEEECCE----------EEEeccccccccH
Confidence 489999999999999999999754 8999999999996
No 13
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=100.00 E-value=2e-36 Score=247.04 Aligned_cols=146 Identities=44% Similarity=0.744 Sum_probs=125.1
Q ss_pred EEEeeCCchhhHHHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHHHhhCC
Q 027406 14 VLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHCP 93 (223)
Q Consensus 14 ~L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~~~ 93 (223)
||||||||+||++++++|++||+++++ ..++.+.||+|+|||+||++|++++.+. ++++++.++|.+...
T Consensus 1 iLsldGGG~rG~~~~~~L~~le~~~~~----~~~~~~~fd~i~GtS~G~iia~~l~~~~------~~~~~~~~~~~~~~~ 70 (258)
T cd07199 1 ILSLDGGGIRGIIPAEILAELEKRLGK----PSRIADLFDLIAGTSTGGIIALGLALGR------YSAEELVELYEELGR 70 (258)
T ss_pred CEEECCchHhHHHHHHHHHHHHHHhCC----CCchhhccceeeeccHHHHHHHHHhcCC------CCHHHHHHHHHHHhH
Confidence 699999999999999999999998753 1138899999999999999999999873 799999999988765
Q ss_pred cccCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccccccccCceEEEeeeCCCCcceeecCCCccC-CCCC
Q 027406 94 KIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDVKK-GALK 172 (223)
Q Consensus 94 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~d~~~~~~v~a~d~~~~~~~~f~~~~~~~-~~~~ 172 (223)
++|. +++|+++|+.++++++|++|+... .+..
T Consensus 71 ~if~-----------------------------------------------~~~i~a~~~~~~~~~~f~~~~~~~~~~~~ 103 (258)
T cd07199 71 KIFP-----------------------------------------------RVLVTAYDLSTGKPVVFSNYDAEEPDDDD 103 (258)
T ss_pred hhcc-----------------------------------------------CeEEEEEEcCCCCeEEEECCCCcccCCcC
Confidence 5442 889999999999999999998654 4456
Q ss_pred CchHHHHHHhhccCCCCCCceeeeccCCCCCCcccceeeeeeeccCCCCC
Q 027406 173 NARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPVI 222 (223)
Q Consensus 173 ~~~l~~av~AS~A~P~~F~p~~i~~~~~~~G~~~~~~~iDGG~~~N~P~l 222 (223)
+.++|+|++||||+|+||||+.+.... ....|+|||+.+|||++
T Consensus 104 ~~~l~d~~~ASsAaP~~f~p~~i~~~~------~~~~~vDGGv~~NnP~~ 147 (258)
T cd07199 104 DFKLWDVARATSAAPTYFPPAVIESGG------DEGAFVDGGVAANNPAL 147 (258)
T ss_pred CccHHHHHHHHhcchhccCcEEeccCC------CeeEEecCccccCChHH
Confidence 789999999999999999999984311 12489999999999975
No 14
>COG3621 Patatin [General function prediction only]
Probab=100.00 E-value=2.8e-35 Score=236.92 Aligned_cols=195 Identities=32% Similarity=0.601 Sum_probs=154.8
Q ss_pred eEEEEEeeCCchhhHHHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHHHh
Q 027406 11 KITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFE 90 (223)
Q Consensus 11 ~~~~L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~ 90 (223)
++|+|+|||||+||..++.+|+.||+.- | .+++++||+++|||+|||++++|+.++ +..+..+.|.+
T Consensus 8 k~rIlsldGGGvrG~i~lE~lr~ieqiq----G--kkl~e~FDl~~GTSiGgilal~La~~k-------s~~e~~qlF~~ 74 (394)
T COG3621 8 KYRILSLDGGGVRGAILLEKLRIIEQIQ----G--KKLCEYFDLIGGTSIGGILALGLALGK-------SPRELKQLFSA 74 (394)
T ss_pred ceeEEEecCCccccHHHHHHHHHHHHHh----C--CcceeeEeeecCccHHHHHHHHHhcCC-------CCchHHHHHHH
Confidence 6899999999999999999999998842 2 379999999999999999999999984 56778888877
Q ss_pred hCCcccCCCccC-CchhHHHHhhhc-cccccCCChHHHHHHHHHHhcccccccccCceEEEeeeCCCCc-cee-ecCCCc
Q 027406 91 HCPKIFPQLSRG-GNFLRSIISSLS-KWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQ-PVI-FSSNDV 166 (223)
Q Consensus 91 ~~~~~f~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~l~d~~~~~~v~a~d~~~~~-~~~-f~~~~~ 166 (223)
...++|...... ....+.+.+.+. .++.++|+.++|.+.|+.++++.++.|+..+++|+.+|+.+.+ |.. |+.++.
T Consensus 75 q~~q~f~ee~~~~~fpv~tFrq~l~~a~~~pkys~~pLiK~lk~~~~D~tlkDL~~~Vvv~~~~l~~~knp~~t~~~~~~ 154 (394)
T COG3621 75 QQAQIFPEEMKHRIFPVGTFRQLLSYALFSPKYSPQPLIKLLKFVCKDYTLKDLIGRVVVPGYDLNNQKNPLFTFSTHHA 154 (394)
T ss_pred hhhhhccHhhccCCCcchhHhhhhhhhhcCCcCCchhHHHHHHHhccccchhhhccceEEEeeecccccCCceeecccCc
Confidence 766666654211 012222233332 2578999999999999988999999999999999999999988 433 334444
Q ss_pred cCCCCCCchHHHHHHhhccCCCCCCceeeeccCCCCCCcccceeeeeeeccCCCCC
Q 027406 167 KKGALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPVI 222 (223)
Q Consensus 167 ~~~~~~~~~l~~av~AS~A~P~~F~p~~i~~~~~~~G~~~~~~~iDGG~~~N~P~l 222 (223)
..+...+..+||++.||+|+|+||||++..+.+ +++...+|||||++|||++
T Consensus 155 ~~~ry~~~~LsDii~~stAAPtyFp~h~~~~i~----~~k~~~~iDGGv~ANnPsl 206 (394)
T COG3621 155 RPSRYNNYKLSDIILASTAAPTYFPPHHFENIT----NTKYHPIIDGGVVANNPSL 206 (394)
T ss_pred cccccccchHHHHHHhcccCCcccCcccccccc----cccceeeecceeeecChhH
Confidence 444578899999999999999999999886653 2234579999999999985
No 15
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=100.00 E-value=3.6e-35 Score=243.66 Aligned_cols=166 Identities=22% Similarity=0.311 Sum_probs=133.2
Q ss_pred EEEEEeeCCchhhHHHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHHHhh
Q 027406 12 ITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEH 91 (223)
Q Consensus 12 ~~~L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~ 91 (223)
...|||+|||+||++|+|||++|||+ +..||+|+|||+||+++++++++ ++.+++.+...+.
T Consensus 15 ~~gLvL~GGG~RG~ahiGvL~aLee~-----------gi~~d~v~GtSaGAi~ga~ya~g-------~~~~~~~~~~~~~ 76 (306)
T cd07225 15 SIALVLGGGGARGCAHIGVIKALEEA-----------GIPVDMVGGTSIGAFIGALYAEE-------RNISRMKQRAREW 76 (306)
T ss_pred CEEEEECChHHHHHHHHHHHHHHHHc-----------CCCCCEEEEECHHHHHHHHHHcC-------CCHHHHHHHHHHH
Confidence 46899999999999999999999995 34699999999999999999998 6777776665543
Q ss_pred CCcccCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccccccccCceEEEeeeCCCCcceeecCCCccCCCC
Q 027406 92 CPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDVKKGAL 171 (223)
Q Consensus 92 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~d~~~~~~v~a~d~~~~~~~~f~~~~~~~~~~ 171 (223)
... +. .++..+.+ +.....+.|+.+.+++.|++.|++.+++|++.++.+++||+.++++++|++
T Consensus 77 ~~~-~~------~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~edl~~p~~~vatdl~tg~~~~~~~-------- 140 (306)
T cd07225 77 AKD-MT------SIWKKLLD-LTYPITSMFSGAAFNRSIHSIFGDKQIEDLWLPYFTITTDITASAMRVHTD-------- 140 (306)
T ss_pred HHH-hH------HHHHHHhc-ccccccccCChHHHHHHHHHHhCCCCHHHcCCCeEEEeeecCCCCEEEecC--------
Confidence 111 00 01111111 112345679999999999999999999999999999999999999999965
Q ss_pred CCchHHHHHHhhccCCCCCCceeeeccCCCCCCcccceeeeeeeccCCCC
Q 027406 172 KNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPV 221 (223)
Q Consensus 172 ~~~~l~~av~AS~A~P~~F~p~~i~~~~~~~G~~~~~~~iDGG~~~N~P~ 221 (223)
.++++|++||||+|++|||+.+... | ..|+|||+.+|+|+
T Consensus 141 --g~l~~avrAS~siP~~f~Pv~~~~~----g----~~~vDGGv~~n~Pv 180 (306)
T cd07225 141 --GSLWRYVRASMSLSGYLPPLCDPKD----G----HLLMDGGYINNLPA 180 (306)
T ss_pred --CCHHHHHHHHhcCCeeccceEeCCC----C----eEEEeccccCcchH
Confidence 3699999999999999999963211 2 38999999999996
No 16
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=100.00 E-value=8.8e-34 Score=230.70 Aligned_cols=164 Identities=21% Similarity=0.198 Sum_probs=127.8
Q ss_pred EEEEEeeCCchhhHHHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHHHhh
Q 027406 12 ITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEH 91 (223)
Q Consensus 12 ~~~L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~ 91 (223)
...|||+|||+||++|+|||++|||+ +..||+|+|||+||+++++++++ ++..++.+...+.
T Consensus 10 ~igLVL~GGGaRG~ahiGVL~aLeE~-----------gi~~d~v~GtSaGAiiga~ya~g-------~~~~~~~~r~~~~ 71 (269)
T cd07227 10 AIGLVLGGGGARGISHIGILQALEEA-----------GIPIDAIGGTSIGSFVGGLYARE-------ADLVPIFGRAKKF 71 (269)
T ss_pred CEEEEECCcHHHHHHHHHHHHHHHHc-----------CCCccEEEEECHHHHHHHHHHcC-------CchHHHHHHHHHH
Confidence 57899999999999999999999984 34699999999999999999988 5666655433322
Q ss_pred CCcccCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccccccccCceEEEeeeCCCCcceeecCCCccCCCC
Q 027406 92 CPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDVKKGAL 171 (223)
Q Consensus 92 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~d~~~~~~v~a~d~~~~~~~~f~~~~~~~~~~ 171 (223)
..+.+. ++..+.. +.....+.++...+.+.|.+.|++..++|.+.++++++||+.++++++|++
T Consensus 72 ~~~~~~-------~~~~l~d-~~~p~~~~~~g~~~~~~l~~~~~~~~iedl~~pf~~~aTdl~tg~~~~~~~-------- 135 (269)
T cd07227 72 AGRMAS-------MWRFLSD-VTYPFASYTTGHEFNRGIWKTFGNTHIEDFWIPFYANSTNITHSRMEIHSS-------- 135 (269)
T ss_pred HHHHhH-------HHHHHhh-cccccccccchhHHHHHHHHHcCcCCHHHCCCCEEEEEEECCCCCEEEecC--------
Confidence 111100 0111000 011122345566777789999999999999999999999999999999975
Q ss_pred CCchHHHHHHhhccCCCCCCceeeeccCCCCCCcccceeeeeeeccCCCC
Q 027406 172 KNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPV 221 (223)
Q Consensus 172 ~~~~l~~av~AS~A~P~~F~p~~i~~~~~~~G~~~~~~~iDGG~~~N~P~ 221 (223)
..+|+|+|||||+|++|||+.+++. .|+|||+.+|.|+
T Consensus 136 --g~l~~avrAS~slPg~~pPv~~~G~----------~~vDGGv~dnlPv 173 (269)
T cd07227 136 --GYAWRYIRASMSLAGLLPPLSDNGS----------MLLDGGYMDNLPV 173 (269)
T ss_pred --CCHHHHHHHHccchhcCCCEEECCE----------EEEcccCCccHhH
Confidence 3599999999999999999998754 8999999999996
No 17
>PRK10279 hypothetical protein; Provisional
Probab=100.00 E-value=5.2e-33 Score=229.65 Aligned_cols=161 Identities=19% Similarity=0.240 Sum_probs=129.3
Q ss_pred eEEEEEeeCCchhhHHHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHHHh
Q 027406 11 KITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFE 90 (223)
Q Consensus 11 ~~~~L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~ 90 (223)
+...|+|+|||+||++|+|||++|+|+ +..||+|+|||+||++|++++++. ..++.+++..
T Consensus 4 ~~igLvL~GGGarG~ahiGVL~aL~E~-----------gi~~d~i~GtS~GAlvga~yA~g~--------~~~l~~~~~~ 64 (300)
T PRK10279 4 IKIGLALGSGAARGWSHIGVINALKKV-----------GIEIDIVAGCSIGSLVGAAYACDR--------LSALEDWVTS 64 (300)
T ss_pred CcEEEEEcCcHHHHHHHHHHHHHHHHc-----------CCCcCEEEEEcHHHHHHHHHHcCC--------hHHHHHHHhc
Confidence 456899999999999999999999984 346999999999999999999883 2345544332
Q ss_pred hCCcccCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccccccccCceEEEeeeCCCCcceeecCCCccCCC
Q 027406 91 HCPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDVKKGA 170 (223)
Q Consensus 91 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~d~~~~~~v~a~d~~~~~~~~f~~~~~~~~~ 170 (223)
.. |.. .... .. +.....+.++.+.+.+.+++.++..+++++..++.+++||+.++++++|+.
T Consensus 65 ~~---~~~------~~~~-~d-~~~~~~gl~~~~~~~~~l~~~~~~~~~e~l~~~~~ivAtdl~tg~~v~~~~------- 126 (300)
T PRK10279 65 FS---YWD------VLRL-MD-LSWQRGGLLRGERVFNQYREIMPETEIENCSRRFGAVATNLSTGRELWFTE------- 126 (300)
T ss_pred cc---hhh------hhhh-hc-cCCCcCcccCcHHHHHHHHHHcChhhHHhCCCCEEEEEEECCCCCEEEecC-------
Confidence 21 100 0000 00 011134678999999999999999999999999999999999999999975
Q ss_pred CCCchHHHHHHhhccCCCCCCceeeeccCCCCCCcccceeeeeeeccCCCC
Q 027406 171 LKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPV 221 (223)
Q Consensus 171 ~~~~~l~~av~AS~A~P~~F~p~~i~~~~~~~G~~~~~~~iDGG~~~N~P~ 221 (223)
..+++|++||||+|++|+|+.+++. .|+|||+.+|.|+
T Consensus 127 ---g~l~~avrAS~aiP~vf~Pv~~~g~----------~~vDGGv~~~~Pv 164 (300)
T PRK10279 127 ---GDLHLAIRASCSMPGLMAPVAHNGY----------WLVDGAVVNPVPV 164 (300)
T ss_pred ---CCHHHHHHHhcccccCCCCEEECCE----------EEEECccCccccH
Confidence 3589999999999999999999754 8999999999996
No 18
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=100.00 E-value=6.5e-33 Score=220.39 Aligned_cols=146 Identities=24% Similarity=0.409 Sum_probs=119.9
Q ss_pred EEeeCCchhhHHHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHHHhhCCc
Q 027406 15 LSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHCPK 94 (223)
Q Consensus 15 L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~~~~ 94 (223)
|+|+|||+||+||+|||++|+|+ ...||+|+|||+||++|++++++... ..+++.++|.++...
T Consensus 1 LvL~GGG~rG~~~~Gvl~aL~e~-----------g~~~d~i~GtS~GAl~aa~~a~~~~~-----~~~~l~~~~~~~~~~ 64 (215)
T cd07209 1 LVLSGGGALGAYQAGVLKALAEA-----------GIEPDIISGTSIGAINGALIAGGDPE-----AVERLEKLWRELSRE 64 (215)
T ss_pred CEecccHHHHHHHHHHHHHHHHc-----------CCCCCEEEEECHHHHHHHHHHcCCcH-----HHHHHHHHHHhCChh
Confidence 79999999999999999999985 23799999999999999999998310 278888888764221
Q ss_pred ccCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccccccccC---ceEEEeeeCCCCcceeecCCCccCCCC
Q 027406 95 IFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLT---NLIIPTFDIKRLQPVIFSSNDVKKGAL 171 (223)
Q Consensus 95 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~d~~~---~~~v~a~d~~~~~~~~f~~~~~~~~~~ 171 (223)
- + + +++++++.+...++.+... ++.|++||+.++++++|++.+.
T Consensus 65 ~---------~---------------~----l~~~~~~~~~~~~~~~~~~~~~~l~i~at~~~tg~~~~f~~~~~----- 111 (215)
T cd07209 65 D---------V---------------F----LRGLLDRALDFDTLRLLAILFAGLVIVAVNVLTGEPVYFDDIPD----- 111 (215)
T ss_pred h---------H---------------H----HHHHHHHhCCHHHHhhccccCceEEEEEEEcCCCCEEEEeCCCc-----
Confidence 0 0 0 6667777777666666654 5999999999999999987542
Q ss_pred CCchHHHHHHhhccCCCCCCceeeeccCCCCCCcccceeeeeeeccCCCC
Q 027406 172 KNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPV 221 (223)
Q Consensus 172 ~~~~l~~av~AS~A~P~~F~p~~i~~~~~~~G~~~~~~~iDGG~~~N~P~ 221 (223)
..++++++||||+|++|||+.+++. .|+|||+.+|+|+
T Consensus 112 --~~~~~av~AS~aiP~~f~pv~i~g~----------~yvDGGv~~n~Pv 149 (215)
T cd07209 112 --GILPEHLLASAALPPFFPPVEIDGR----------YYWDGGVVDNTPL 149 (215)
T ss_pred --chHHHHHHHhccccccCCCEEECCe----------EEEcCccccCcCH
Confidence 4699999999999999999999754 8999999999997
No 19
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=99.98 E-value=3.5e-32 Score=209.26 Aligned_cols=157 Identities=23% Similarity=0.283 Sum_probs=117.0
Q ss_pred EEeeCCchhhHHHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHHHhhCC-
Q 027406 15 LSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHCP- 93 (223)
Q Consensus 15 L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~~~- 93 (223)
|+|+|||+||+||+|||++|+|+ ...||+|+|||+||++|++++++ .+.+++..+..+...
T Consensus 1 Lvl~GGG~rG~~~~Gvl~aL~e~-----------gi~~d~v~GtSaGAi~aa~~a~g-------~~~~~~~~~~~~~~~~ 62 (172)
T cd07198 1 LVLSGGGALGIYHVGVAKALRER-----------GPLIDIIAGTSAGAIVAALLASG-------RDLEEALLLLLRLSRE 62 (172)
T ss_pred CEECCcHHHHHHHHHHHHHHHHc-----------CCCCCEEEEECHHHHHHHHHHcC-------CCHHHHHHHHHHHHHH
Confidence 79999999999999999999985 23499999999999999999998 466666655432211
Q ss_pred --cccCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccccccccCceEEEeeeCCCCcceeecCCCccCCCC
Q 027406 94 --KIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDVKKGAL 171 (223)
Q Consensus 94 --~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~d~~~~~~v~a~d~~~~~~~~f~~~~~~~~~~ 171 (223)
..+... ......+....++..++ .+....+++...++.|++||+.++++++|+. .
T Consensus 63 ~~~~~~~~---------------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~at~l~tg~~~~~~~-~------ 119 (172)
T cd07198 63 VRLRFDGA---------------FPPTGRLLGILRQPLLS-ALPDDAHEDASGKLFISLTRLTDGENVLVSD-T------ 119 (172)
T ss_pred HHHhccCC---------------cCcccchhHHHHHHHHH-hccHhHHHHCCCCEEEEEEECCCCCEEEEeC-C------
Confidence 111110 00111222233333333 3345567788899999999999999999965 2
Q ss_pred CCchHHHHHHhhccCCCCCCceee--eccCCCCCCcccceeeeeeeccCCCCC
Q 027406 172 KNARLADICVGTSAAPTYLPAHHF--VTKDSTTGDTCSFDLIDGGVAANDPVI 222 (223)
Q Consensus 172 ~~~~l~~av~AS~A~P~~F~p~~i--~~~~~~~G~~~~~~~iDGG~~~N~P~l 222 (223)
.+..+++|++||||+|++|+|+.+ ++. .|+|||+.+|+|+.
T Consensus 120 ~~~~l~~av~AS~aiP~~f~p~~~~~~g~----------~~vDGGv~~n~Pv~ 162 (172)
T cd07198 120 SKGELWSAVRASSSIPGYFGPVPLSFRGR----------RYGDGGLSNNLPVA 162 (172)
T ss_pred CcchHHHHHHHHcchhhhcCceeecCCCe----------EEEeCCcccCCCCc
Confidence 246799999999999999999998 543 89999999999974
No 20
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=99.97 E-value=3.3e-32 Score=223.17 Aligned_cols=161 Identities=20% Similarity=0.301 Sum_probs=123.0
Q ss_pred EEeeCCchhhHHHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHHHhhCC-
Q 027406 15 LSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHCP- 93 (223)
Q Consensus 15 L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~~~- 93 (223)
|||+|||+||+|++|||++|++.. +. .||+|+|||+||++|++++++. +.+ ..+.|.+...
T Consensus 1 Lvl~GGG~rG~~~~Gvl~al~e~~---------~~-~fd~i~GtSaGAi~a~~~~~g~-------~~~-~~~~~~~~~~~ 62 (266)
T cd07208 1 LVLEGGGMRGAYTAGVLDAFLEAG---------IR-PFDLVIGVSAGALNAASYLSGQ-------RGR-ALRINTKYATD 62 (266)
T ss_pred CeeccchhhHHHHHHHHHHHHHcC---------CC-CCCEEEEECHHHHhHHHHHhCC-------cch-HHHHHHHhcCC
Confidence 799999999999999999999851 22 5999999999999999999884 222 2333433221
Q ss_pred cccCCCccCCchhHHHHhhhccccccCCChHHHHHHH---HHHhcccccccccCceEEEeeeCCCCcceeecCCCccCCC
Q 027406 94 KIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLT---KEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDVKKGA 170 (223)
Q Consensus 94 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l---~~~~~~~~l~d~~~~~~v~a~d~~~~~~~~f~~~~~~~~~ 170 (223)
..|- ++ .++++ .++.++.+.+.+.+ .+.++..++.+...++.|++||+.++++++|++.+.
T Consensus 63 ~~~~------~~----~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~at~~~~g~~~~~~~~~~---- 126 (266)
T cd07208 63 PRYL------GL----RSLLR--TGNLFDLDFLYDELPDGLDPFDFEAFAASPARFYVVATDADTGEAVYFDKPDI---- 126 (266)
T ss_pred CCcc------CH----HHHhc--CCCeecHHHHHhhccCccCCcCHHHHHhCCCcEEEEEEECCCCCEEEEeCcCc----
Confidence 1111 11 11121 24567777777765 344666778888889999999999999999988643
Q ss_pred CCCchHHHHHHhhccCCCCCCceeeeccCCCCCCcccceeeeeeeccCCCC
Q 027406 171 LKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPV 221 (223)
Q Consensus 171 ~~~~~l~~av~AS~A~P~~F~p~~i~~~~~~~G~~~~~~~iDGG~~~N~P~ 221 (223)
+..+++|++||||+|++|||+.+++. .|+|||+.+|+|+
T Consensus 127 --~~~l~~av~AS~aiP~~f~pv~i~g~----------~yvDGGv~~~~P~ 165 (266)
T cd07208 127 --LDDLLDALRASSALPGLFPPVRIDGE----------PYVDGGLSDSIPV 165 (266)
T ss_pred --chHHHHHHHHHhcchhhcCCEEECCE----------EEEcCccCcchhH
Confidence 35799999999999999999999754 8999999999996
No 21
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=99.97 E-value=1.1e-30 Score=210.55 Aligned_cols=163 Identities=18% Similarity=0.236 Sum_probs=127.9
Q ss_pred EEeeCCchhhHHHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHHHhhCCc
Q 027406 15 LSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHCPK 94 (223)
Q Consensus 15 L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~~~~ 94 (223)
|||+|||.||+||+||+++|+|+- +...+|.|+|||+||++|++++++ .+.+++.+.+.+..++
T Consensus 3 LsfsGGG~rG~yh~GVl~aL~e~g---------~~~~~d~i~GtSAGAl~aa~~a~g-------~~~~~~~~~~~~~~~~ 66 (245)
T cd07218 3 LSFAGCGFLGIYHVGVAVCLKKYA---------PHLLLNKISGASAGALAACCLLCD-------LPLGEMTSDFLRVVRE 66 (245)
T ss_pred EEEeCcHHHHHHHHHHHHHHHHhC---------cccCCCeEEEEcHHHHHHHHHHhC-------CcHHHHHHHHHHHHHH
Confidence 899999999999999999999962 233579999999999999999998 4567777666555432
Q ss_pred ccCCCccCCchhHHHHhhhccccccCCC-hHHHHHHHHHHhcccccccccCceEEEeeeCCCCcceeecCCCccCCCCCC
Q 027406 95 IFPQLSRGGNFLRSIISSLSKWVRPMYD-GKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDVKKGALKN 173 (223)
Q Consensus 95 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~l~~~~~~~~l~d~~~~~~v~a~d~~~~~~~~f~~~~~~~~~~~~ 173 (223)
..... +.. ..+.|+ .+.+++.+++.+.+....+...++.|++|++.+++.++|++++. +
T Consensus 67 ~~~~~-------------lg~-~~p~~~l~~~l~~~l~~~lp~d~~~~~~~~L~i~~T~l~~g~~~~~s~f~s------~ 126 (245)
T cd07218 67 ARRHS-------------LGP-FSPSFNIQTCLLEGLQKFLPDDAHERVSGRLHISLTRVSDGKNVIVSEFES------R 126 (245)
T ss_pred HHHhc-------------ccC-CccccCHHHHHHHHHHHHCCcchHHhCCCCEEEEEEECCCCCeEEEecCCC------c
Confidence 21110 011 123344 57788889999988877778889999999999999999998764 3
Q ss_pred chHHHHHHhhccCCCCC--CceeeeccCCCCCCcccceeeeeeeccCCCCCC
Q 027406 174 ARLADICVGTSAAPTYL--PAHHFVTKDSTTGDTCSFDLIDGGVAANDPVIN 223 (223)
Q Consensus 174 ~~l~~av~AS~A~P~~F--~p~~i~~~~~~~G~~~~~~~iDGG~~~N~P~l~ 223 (223)
..+++|++|||++|+|+ .|+.+++. .|+|||+.+|.|+++
T Consensus 127 ~dLi~al~AS~~IP~~~g~~P~~~~G~----------~~vDGGv~dnlP~~~ 168 (245)
T cd07218 127 EELLQALLCSCFIPVFSGLLPPKFRGV----------RYMDGGFSDNLPTLD 168 (245)
T ss_pred chHHHHHHHhcCCCcccCCCCeEECCE----------EEEcCcccCCCCCCC
Confidence 47999999999999994 56676543 899999999999864
No 22
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=99.97 E-value=2.7e-30 Score=215.71 Aligned_cols=169 Identities=24% Similarity=0.324 Sum_probs=131.6
Q ss_pred eEEEEEeeCCchhhHHHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHHHh
Q 027406 11 KITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFE 90 (223)
Q Consensus 11 ~~~~L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~ 90 (223)
+...|+|.|||+||++|+|||++|+|. +..||+|+|||+||++|++++++ ++.++...+-..
T Consensus 10 ~~i~LvL~GGgArG~~hiGVl~aL~e~-----------gi~~~~iaGtS~GAiva~l~A~g-------~~~~~~~~~~~~ 71 (306)
T COG1752 10 LRIGLVLGGGGARGAAHIGVLKALEEA-----------GIPIDVIAGTSAGAIVAALYAAG-------MDEDELELAAQR 71 (306)
T ss_pred ceEEEEecCcHHHHHHHHHHHHHHHHc-----------CCCccEEEecCHHHHHHHHHHcC-------CChhHHHHHHHH
Confidence 458899999999999999999999985 35799999999999999999998 444554444333
Q ss_pred hCCcccC-CCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhccc--ccccccCc-eEEEeeeCCCCcceeecCCCc
Q 027406 91 HCPKIFP-QLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDI--TIKDTLTN-LIIPTFDIKRLQPVIFSSNDV 166 (223)
Q Consensus 91 ~~~~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~--~l~d~~~~-~~v~a~d~~~~~~~~f~~~~~ 166 (223)
+...... ...+ ..... .+......+.++.+.+.+.+++++++. .++++... +.|+++|+.+++..+|+.
T Consensus 72 l~~~~~~~~~~~--~~~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~atd~~~g~~~~~~~--- 144 (306)
T COG1752 72 LTARWDNARDLL--RLLDL--TLPGGRPLGLLRGEKLRNLLRELLGDLLFDFEDLPIPLLYVVATDLLTGREVVFSE--- 144 (306)
T ss_pred HHhhhccccchh--hccch--hhhccCccceecHHHHHHHHHHHhcccccCHHHcCCCcEEEEeeEcCCCCEEEecC---
Confidence 3221110 0000 00000 000000236899999999999999999 99999999 999999999999999975
Q ss_pred cCCCCCCchHHHHHHhhccCCCCCCceeeeccCCCCCCcccceeeeeeeccCCCC
Q 027406 167 KKGALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPV 221 (223)
Q Consensus 167 ~~~~~~~~~l~~av~AS~A~P~~F~p~~i~~~~~~~G~~~~~~~iDGG~~~N~P~ 221 (223)
..+|+|++||||+|++|||+.+++. .|+|||+.+|.|+
T Consensus 145 -------g~~~~av~AS~siP~vF~Pv~i~~~----------~~vDGg~~~n~Pv 182 (306)
T COG1752 145 -------GSLAEAVRASCSIPGVFPPVEIDGR----------LLVDGGVLNNVPV 182 (306)
T ss_pred -------CcHHHHHHHhcccCccCCCEEECCE----------EEEecCccCCccH
Confidence 3499999999999999999999854 8999999999995
No 23
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=99.97 E-value=2.3e-30 Score=209.29 Aligned_cols=166 Identities=18% Similarity=0.216 Sum_probs=123.4
Q ss_pred EEeeCCchhhHHHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHHHhhCCc
Q 027406 15 LSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHCPK 94 (223)
Q Consensus 15 L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~~~~ 94 (223)
|||+|||+||+||+||+++|+|+- +++.+.||.|+|||+||++|++++... ...+++.+++....+.
T Consensus 2 L~l~GGG~rG~yhiGVl~~L~e~g-------~~l~~~~~~i~GtSaGAl~aa~~a~~~------~~~~~~~~~~~~~~~~ 68 (246)
T cd07222 2 LSFAACGFLGIYHLGAAKALLRHG-------KKLLKRVKRFAGASAGSLVAAVLLTAP------EKIEECKEFTYKFAEE 68 (246)
T ss_pred eeEcccHHHHHHHHHHHHHHHHcC-------chhhccCCEEEEECHHHHHHHHHhcCh------HHHHHHHHHHHHHHHH
Confidence 899999999999999999999851 234567999999999999999998541 2345555544433322
Q ss_pred ccCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccccccccCceEEEeeeCCCCcceeecCCCccCCCCCCc
Q 027406 95 IFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDVKKGALKNA 174 (223)
Q Consensus 95 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~d~~~~~~v~a~d~~~~~~~~f~~~~~~~~~~~~~ 174 (223)
...... ..+..+....+.+++.+++.+++........++.|++||+.+++.++|++++.+ .
T Consensus 69 ~~~~~~-------------~~~~~~~~~~~~l~~~l~~~lp~~~~~~~~~~l~I~aTdl~tg~~v~~~~f~s~------~ 129 (246)
T cd07222 69 VRKQRF-------------GAMTPGYDFMARLRKGIESILPTDAHELANDRLHVSITNLKTRKNYLVSNFTSR------E 129 (246)
T ss_pred HHhccc-------------CCCCCcchHHHHHHHHHHHHCCHHHHhcCCCcEEEEEEECCCCCeEEEeccCCc------c
Confidence 211110 011112223567888899988864333334789999999999999999887543 3
Q ss_pred hHHHHHHhhccCCCC--CCceeeeccCCCCCCcccceeeeeeeccCCCCC
Q 027406 175 RLADICVGTSAAPTY--LPAHHFVTKDSTTGDTCSFDLIDGGVAANDPVI 222 (223)
Q Consensus 175 ~l~~av~AS~A~P~~--F~p~~i~~~~~~~G~~~~~~~iDGG~~~N~P~l 222 (223)
.+.+|++||||+|+| |+|+.+++. .|+|||+.+|.|+.
T Consensus 130 ~L~~av~AS~aiP~~~g~~pv~~~G~----------~~vDGGv~~~~P~~ 169 (246)
T cd07222 130 DLIKVLLASCYVPVYAGLKPVEYKGQ----------KWIDGGFTNSLPVL 169 (246)
T ss_pred hHHHHHHHhhcCccccCCCCeEECCE----------EEEecCccCCCCCC
Confidence 599999999999998 599998754 89999999999975
No 24
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=99.97 E-value=5.1e-30 Score=206.95 Aligned_cols=164 Identities=23% Similarity=0.302 Sum_probs=125.2
Q ss_pred EEeeCCchhhHHHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHHHhhCCc
Q 027406 15 LSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHCPK 94 (223)
Q Consensus 15 L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~~~~ 94 (223)
|||+|||.||+||+||+++|+|+- +.+...+|.|+|||+||++|++++++ .+.+++.+.+.+...+
T Consensus 2 LslsGGG~~G~yh~GVl~~L~e~g-------~~l~~~~~~i~GtSAGAl~aa~~a~g-------~~~~~~~~~~~~~~~~ 67 (243)
T cd07204 2 LSFSGCGFLGIYHVGVASALREHA-------PRLLQNARRIAGASAGAIVAAVVLCG-------VSMEEACSFILKVVSE 67 (243)
T ss_pred eeEcchHHHHHHHHHHHHHHHHcC-------cccccCCCEEEEEcHHHHHHHHHHhC-------CCHHHHHHHHHHHHhh
Confidence 899999999999999999999851 12223357999999999999999998 5677776666554433
Q ss_pred ccCCCccCCchhHHHHhhhccccccCCC-hHHHHHHHHHHhcccccccccCceEEEeeeCCCCcceeecCCCccCCCCCC
Q 027406 95 IFPQLSRGGNFLRSIISSLSKWVRPMYD-GKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDVKKGALKN 173 (223)
Q Consensus 95 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~l~~~~~~~~l~d~~~~~~v~a~d~~~~~~~~f~~~~~~~~~~~~ 173 (223)
..... + +. ..+.++ .+.+++.+++.+++...+....++.|++||+.++++++|+.+..+
T Consensus 68 ~~~~~-~--g~-----------~~~~~~~~~~l~~~l~~~lp~~~~~~~~~~l~I~~T~l~~g~~~~~~~f~s~------ 127 (243)
T cd07204 68 ARRRS-L--GP-----------LHPSFNLLKILRQGLEKILPDDAHELASGRLHISLTRVSDGENVLVSEFDSK------ 127 (243)
T ss_pred hhhhh-c--Cc-----------ccccchHHHHHHHHHHHHCChhHHHhcCCCEEEEEEECCCCCEEEEecCCCc------
Confidence 21110 0 00 011122 245777888888877777777899999999999999999987643
Q ss_pred chHHHHHHhhccCCCC--CCceeeeccCCCCCCcccceeeeeeeccCCCCC
Q 027406 174 ARLADICVGTSAAPTY--LPAHHFVTKDSTTGDTCSFDLIDGGVAANDPVI 222 (223)
Q Consensus 174 ~~l~~av~AS~A~P~~--F~p~~i~~~~~~~G~~~~~~~iDGG~~~N~P~l 222 (223)
..+.+|++|||++|+| |.|+.+++. .|+|||+.+|.|+.
T Consensus 128 ~~Li~Al~AS~~iP~~~g~~P~~~~G~----------~~vDGGv~~~lP~~ 168 (243)
T cd07204 128 EELIQALVCSCFIPFYCGLIPPKFRGV----------RYIDGGLSDNLPIL 168 (243)
T ss_pred hHHHHHHHHhccCCcccCCCCeEECCE----------EEEeCCcccCCCCC
Confidence 3689999999999999 478888754 89999999999975
No 25
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=99.97 E-value=9.5e-30 Score=205.70 Aligned_cols=166 Identities=19% Similarity=0.224 Sum_probs=126.5
Q ss_pred EEEeeCCchhhHHHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHHHhhCC
Q 027406 14 VLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHCP 93 (223)
Q Consensus 14 ~L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~~~ 93 (223)
-|||+|||.||+||+||+++|+|+. +++...||.|+|||+||++|++++++ .+.+++.+.+.++.+
T Consensus 2 ~Lsl~GGG~rG~yh~GVl~aL~e~~-------~~l~~~~~~i~GtSAGAl~aa~~asg-------~~~~~~~~~~~~~~~ 67 (252)
T cd07221 2 SLSFAGCGFLGFYHVGVTRCLSERA-------PHLLRDARMFFGASAGALHCVTFLSG-------LPLDQILQILMDLVR 67 (252)
T ss_pred EEEEeCcHHHHHHHHHHHHHHHHhC-------cchhccCCEEEEEcHHHHHHHHHHhC-------CCHHHHHHHHHHHHH
Confidence 3899999999999999999999862 23455699999999999999999998 567778777776543
Q ss_pred cccCCCccCCchhHHHHhhhccccccCC-ChHHHHHHHHHHhcccccccccCceEEEeeeCCCCcceeecCCCccCCCCC
Q 027406 94 KIFPQLSRGGNFLRSIISSLSKWVRPMY-DGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDVKKGALK 172 (223)
Q Consensus 94 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~l~~~~~~~~l~d~~~~~~v~a~d~~~~~~~~f~~~~~~~~~~~ 172 (223)
..-... + .+.++.| ....+++.++++++.........++.|++||+.+++.++|++++.
T Consensus 68 ~~~~~~-------------~-g~~~~~~~~~~~l~~~l~~~lp~~~~~~~~~~l~I~~T~l~tg~~v~~~~f~s------ 127 (252)
T cd07221 68 SARSRN-------------I-GILHPSFNLSKHLRDGLQRHLPDNVHQLISGKMCISLTRVSDGENVLVSDFHS------ 127 (252)
T ss_pred hccccc-------------c-cccCcccCHHHHHHHHHHHHCCcCHHHhcCCCEEEEEEECCCCCEEEEecCCC------
Confidence 211110 0 1111222 246777888888876433334568999999999999999988764
Q ss_pred CchHHHHHHhhccCCCC--CCceeeeccCCCCCCcccceeeeeeeccCCCCCC
Q 027406 173 NARLADICVGTSAAPTY--LPAHHFVTKDSTTGDTCSFDLIDGGVAANDPVIN 223 (223)
Q Consensus 173 ~~~l~~av~AS~A~P~~--F~p~~i~~~~~~~G~~~~~~~iDGG~~~N~P~l~ 223 (223)
+..+++|++||||+|+| |.|+.+++. .|+|||+.+|.|+.+
T Consensus 128 ~~~l~~av~AS~siP~~~g~~P~~~~G~----------~yvDGGv~dnlPv~~ 170 (252)
T cd07221 128 KDEVVDALVCSCFIPFFSGLIPPSFRGV----------RYVDGGVSDNVPFFD 170 (252)
T ss_pred chHHHHHHHHHccCccccCCCCeEECCE----------EEEeCCcccCCCccC
Confidence 34799999999999999 557777643 899999999999863
No 26
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=99.97 E-value=1.4e-29 Score=218.06 Aligned_cols=185 Identities=21% Similarity=0.319 Sum_probs=133.6
Q ss_pred eEEEEEeeCCchhhHHHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHHHh
Q 027406 11 KITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFE 90 (223)
Q Consensus 11 ~~~~L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~ 90 (223)
+..+|+|+|||+||++|+|||++|+|+ ...+|+|+|||+||++|++++.+ +.+|+.+++..
T Consensus 72 GrtALvLsGGG~rG~~hiGVLkaL~E~-----------gl~p~vIsGTSaGAivAal~as~--------~~eel~~~l~~ 132 (421)
T cd07230 72 GRTALLLSGGGTFGMFHIGVLKALFEA-----------NLLPRIISGSSAGSIVAAILCTH--------TDEEIPELLEE 132 (421)
T ss_pred CCEEEEEcCcHHHHHHHHHHHHHHHHc-----------CCCCCEEEEECHHHHHHHHHHcC--------CHHHHHHHHHh
Confidence 578999999999999999999999885 23579999999999999999985 45777777766
Q ss_pred hCC---cccCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccccccc----cCceEEEeeeCCCCc-ceeec
Q 027406 91 HCP---KIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDT----LTNLIIPTFDIKRLQ-PVIFS 162 (223)
Q Consensus 91 ~~~---~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~d~----~~~~~v~a~d~~~~~-~~~f~ 162 (223)
... .+|........+...+.++++ .++.+|.+.+++.+++.+++.+|.+. .+.+.|++++...++ |.++.
T Consensus 133 ~~~~~~~~f~~~~~~~~~~~~~~~l~~--~g~~~d~~~l~~~l~~~lgd~tF~Eay~rt~r~L~I~vt~~~~~~~p~lln 210 (421)
T cd07230 133 FPYGDFNVFEDPDQEENVLQKLSRFLK--YGSWFDISHLTRVMRGFLGDLTFQEAYNRTRRILNITVSPASIYELPRLLN 210 (421)
T ss_pred cchHHHHHHhcccccchHHHHHHHHHh--cCCCcCHHHHHHHHHHHhCCCCHHHHHHhhCCeEEEEEEeccccCCCeeee
Confidence 321 234332110012223333222 45689999999999999999888775 345677777776665 45544
Q ss_pred CCCccCCCCCCchHHHHHHhhccCCCCCCceeeeccCCCCCCc-----ccceeeeeeeccCCCC
Q 027406 163 SNDVKKGALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDT-----CSFDLIDGGVAANDPV 221 (223)
Q Consensus 163 ~~~~~~~~~~~~~l~~av~AS~A~P~~F~p~~i~~~~~~~G~~-----~~~~~iDGG~~~N~P~ 221 (223)
... .+++.+|+||+||||+|++|+|+++..+++.+|+. ....|+|||+.+|.|+
T Consensus 211 y~t-----~p~v~I~~AV~AS~AlP~vf~pv~l~~Kd~~~g~i~p~~~~g~~~vDGgv~~~iPi 269 (421)
T cd07230 211 YIT-----APNVLIWSAVCASCSVPGVFPSSPLYEKDPKTGEIVPWNPSSVKWIDGSVDNDLPM 269 (421)
T ss_pred ecc-----CCCcHHHHHHHHhcCchhhcCCeEEEeecCCCCceecccCCCCceeCCCccccChH
Confidence 322 24678999999999999999999985444212321 1247999999999995
No 27
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=99.96 E-value=2.4e-29 Score=215.68 Aligned_cols=183 Identities=16% Similarity=0.197 Sum_probs=134.3
Q ss_pred eEEEEEeeCCchhhHHHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHHHh
Q 027406 11 KITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFE 90 (223)
Q Consensus 11 ~~~~L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~ 90 (223)
+..+|+|+|||+||++|+|||++|+|+ ...||+|+|||+||++|++++.+ +.+|+.+.+..
T Consensus 66 grtALvLsGGG~rG~~h~GVlkaL~e~-----------gllp~iI~GtSAGAivaalla~~--------t~~el~~~~~~ 126 (407)
T cd07232 66 GRTALCLSGGAAFAYYHFGVVKALLDA-----------DLLPNVISGTSGGSLVAALLCTR--------TDEELKQLLVP 126 (407)
T ss_pred CCEEEEECCcHHHHHHHHHHHHHHHhC-----------CCCCCEEEEECHHHHHHHHHHcC--------CHHHHHHHHhh
Confidence 457999999999999999999999985 24689999999999999999985 34677666554
Q ss_pred hCCcccCCCccCCchhHHHHhhhccccccCCChHHHHHH-HHHHhccccccccc----CceEEEeeeCCCCcceeecCCC
Q 027406 91 HCPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSL-TKEILEDITIKDTL----TNLIIPTFDIKRLQPVIFSSND 165 (223)
Q Consensus 91 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~~l~d~~----~~~~v~a~d~~~~~~~~f~~~~ 165 (223)
.....|..... .+..++.++++ .+..+|.+.+++. ++..+++.++.+.. +.+.|++++.+++++..|.||.
T Consensus 127 ~~~~~~~~~~~--~~~~~~~~~l~--~G~~~d~~~l~~~~~~~~~gd~TFeEa~~~tgr~l~I~vt~~d~~~~~~lln~~ 202 (407)
T cd07232 127 ELARKITACEP--PWLVWIPRWLK--TGARFDSVEWARTCCWFTRGSMTFEEAYERTGRILNISVVPADPHSPTILLNYL 202 (407)
T ss_pred hhhhhhhhccc--hHHHHHHHHHh--cCCCCCHHHHHHHHHHHhcCCCCHHHHHHhcCCEEEEEEEECCCCCceEEeccC
Confidence 22211111110 12222333222 3567999999998 88899998887753 3467777777788888887775
Q ss_pred ccCCCCCCchHHHHHHhhccCCCCCCceeeeccCCCCCCc-----ccceeeeeeeccCCCC
Q 027406 166 VKKGALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDT-----CSFDLIDGGVAANDPV 221 (223)
Q Consensus 166 ~~~~~~~~~~l~~av~AS~A~P~~F~p~~i~~~~~~~G~~-----~~~~~iDGG~~~N~P~ 221 (223)
. .+++.+|+||+||||+|++|+|+.+-.++. +|.. ....|+|||+.+|.|+
T Consensus 203 t----sp~v~I~sAV~AS~svPgvf~pv~l~~k~~-~g~~~~~~~~g~~~~DGgv~~diP~ 258 (407)
T cd07232 203 T----SPNCTIWSAVLASAAVPGILNPVVLMMKDP-DGTLIPPFSFGSKWKDGSLRTDIPL 258 (407)
T ss_pred C----CCccHHHHHHhcccCccccccCeEEEeecC-CCCcccccCCCCceecCCcCcccHH
Confidence 4 246889999999999999999999844432 2322 2347999999999995
No 28
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1. Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.
Probab=99.96 E-value=2.2e-29 Score=210.45 Aligned_cols=167 Identities=17% Similarity=0.224 Sum_probs=128.8
Q ss_pred eEEEEEeeCCchhhHHHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHHHh
Q 027406 11 KITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFE 90 (223)
Q Consensus 11 ~~~~L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~ 90 (223)
....|||+|||+||+||+||+++|+|.- +++...||.|+|||+||++|++++++ .+++++.+.+..
T Consensus 11 ~~~gLvFsGGGfrGiYHvGVl~aL~E~g-------p~ll~~~d~IaGtSAGALvAAl~asG-------~s~de~~r~~~~ 76 (382)
T cd07219 11 TPHSISFSGSGFLSFYQAGVVDALRDLA-------PRMLETAHRVAGTSAGSVIAALVVCG-------ISMDEYLRVLNV 76 (382)
T ss_pred CCceEEEcCcHHHHHHHHHHHHHHHhcC-------CcccccCCeEEEEcHHHHHHHHHHhC-------CCHHHHHHHHHH
Confidence 3568999999999999999999998851 23455799999999999999999998 567787777654
Q ss_pred hCCcccCCCccCCchhHHHHhhhccccccCCC-hHHHHHHHHHHhcccccccccCceEEEeeeCCCCcceeecCCCccCC
Q 027406 91 HCPKIFPQLSRGGNFLRSIISSLSKWVRPMYD-GKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDVKKG 169 (223)
Q Consensus 91 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~l~~~~~~~~l~d~~~~~~v~a~d~~~~~~~~f~~~~~~~~ 169 (223)
..... .+.. + ++..+.++ .+.+++.|++.+.+..+.+...++.|++||+.+|+.++|+.++.
T Consensus 77 ~~~~~-r~~~------------l-G~~~p~~~l~~~lr~~L~~~LP~da~e~~~g~L~IsaTdl~tGknv~fS~F~S--- 139 (382)
T cd07219 77 GVAEV-RKSF------------L-GPLSPSCKMVQMMRQFLYRVLPEDSYKVATGKLHVSLTRVTDGENVVVSEFTS--- 139 (382)
T ss_pred HHHHH-HHhh------------c-cCccccchHHHHHHHHHHhhCcHhhHHhCCCcEEEEEEECCCCCEEEEeccCC---
Confidence 32222 1110 0 11111111 15677888888888888888899999999999999999998754
Q ss_pred CCCCchHHHHHHhhccCCCCC--CceeeeccCCCCCCcccceeeeeeeccCCCC
Q 027406 170 ALKNARLADICVGTSAAPTYL--PAHHFVTKDSTTGDTCSFDLIDGGVAANDPV 221 (223)
Q Consensus 170 ~~~~~~l~~av~AS~A~P~~F--~p~~i~~~~~~~G~~~~~~~iDGG~~~N~P~ 221 (223)
+..+.+|++|||++|+|+ .|+.+++. .|||||+.+|+|+
T Consensus 140 ---~~dLidAV~AScaIP~y~G~~Pp~irG~----------~yVDGGvsdnlPv 180 (382)
T cd07219 140 ---KEELIEALYCSCFVPVYCGLIPPTYRGV----------RYIDGGFTGMQPC 180 (382)
T ss_pred ---cchHHHHHHHHccCccccCCcCeEECCE----------EEEcCCccCCcCc
Confidence 357999999999999985 35577643 7999999999996
No 29
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=99.96 E-value=3.3e-28 Score=196.14 Aligned_cols=166 Identities=17% Similarity=0.165 Sum_probs=123.0
Q ss_pred EEEEeeCCchhhHHHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHHHhhC
Q 027406 13 TVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHC 92 (223)
Q Consensus 13 ~~L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~~ 92 (223)
--|||+|||.||+||+||+++|+|+- +.+.+.+|.|+|+||||++|+.++++ .+.+++.+...+++
T Consensus 5 ~~LsfsGGG~rG~yh~GVl~~L~e~g-------~~l~~~~~~i~G~SAGAl~aa~~a~g-------~~~~~~~~~~~~~a 70 (249)
T cd07220 5 WNISFAGCGFLGVYHVGVASCLLEHA-------PFLVANARKIYGASAGALTATALVTG-------VCLGECGASVIRVA 70 (249)
T ss_pred ceEEEeChHHHHHHHHHHHHHHHhcC-------CcccccCCeEEEEcHHHHHHHHHHcC-------CCHHHHHHHHHHHH
Confidence 35999999999999999999999862 23455689999999999999999998 45555555444442
Q ss_pred CcccCCCccCCchhHHHHhhhccccccCCC-hHHHHHHHHHHhcccccccccCceEEEeeeCCCCcceeecCCCccCCCC
Q 027406 93 PKIFPQLSRGGNFLRSIISSLSKWVRPMYD-GKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDVKKGAL 171 (223)
Q Consensus 93 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~l~~~~~~~~l~d~~~~~~v~a~d~~~~~~~~f~~~~~~~~~~ 171 (223)
++. .+... ++ ..+.|+ .+.+++.+++.+.+...+....++.|++||+.+++.++|+++...
T Consensus 71 ~~~-r~~~~--g~-----------~~~~~~l~~~l~~~l~~~lp~~a~~~~~~~l~is~T~~~tg~~~~~s~f~s~---- 132 (249)
T cd07220 71 KEA-RKRFL--GP-----------LHPSFNLVKILRDGLLRTLPENAHELASGRLGISLTRVSDGENVLVSDFNSK---- 132 (249)
T ss_pred HHh-hHhhc--cC-----------ccccchHHHHHHHHHHHHCChhhHHHCCCcEEEEEEECCCCCEEEEecCCCc----
Confidence 211 00000 00 011111 135777788888877777777899999999999999999987643
Q ss_pred CCchHHHHHHhhccCCCCC--CceeeeccCCCCCCcccceeeeeeeccCCCCC
Q 027406 172 KNARLADICVGTSAAPTYL--PAHHFVTKDSTTGDTCSFDLIDGGVAANDPVI 222 (223)
Q Consensus 172 ~~~~l~~av~AS~A~P~~F--~p~~i~~~~~~~G~~~~~~~iDGG~~~N~P~l 222 (223)
..+.+|++|||++|+|+ .|+.+++. .|+|||+.+|.|+.
T Consensus 133 --~dLi~al~AScsiP~~~g~~P~~~~G~----------~yvDGGvsdnlPv~ 173 (249)
T cd07220 133 --EELIQALVCSCFIPVYCGLIPPTLRGV----------RYVDGGISDNLPQY 173 (249)
T ss_pred --chHHHHHHHhccCccccCCCCeeECCE----------EEEcCCcccCCCCC
Confidence 46899999999999885 35556543 89999999999975
No 30
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=99.95 E-value=1.4e-27 Score=191.71 Aligned_cols=157 Identities=18% Similarity=0.195 Sum_probs=120.9
Q ss_pred EEeeCCchhhHHHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHHHhhCCc
Q 027406 15 LSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHCPK 94 (223)
Q Consensus 15 L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~~~~ 94 (223)
|+|+|||.+|+||+|||++|+|+ .+...|+.|+|+|+||++|++++++ .+.+++.+.+.++..+
T Consensus 2 lsfsggG~lg~yh~GVl~~L~e~---------gi~~~~~~i~G~SAGAl~aa~~asg-------~~~~~~~~~~~~~~~~ 65 (233)
T cd07224 2 FSFSAAGLLFPYHLGVLSLLIEA---------GVINETTPLAGASAGSLAAACSASG-------LSPEEALEATEELAED 65 (233)
T ss_pred eeecchHHHHHHHHHHHHHHHHc---------CCCCCCCEEEEEcHHHHHHHHHHcC-------CCHHHHHHHHHHHHHH
Confidence 89999999999999999999985 3444589999999999999999998 4667777776665443
Q ss_pred ccCCCccCCchhHHHHhhhccccccCCC-hHHHHHHHHHHhccccccccc-CceEEEeeeCCCCc-ceeecCCCccCCCC
Q 027406 95 IFPQLSRGGNFLRSIISSLSKWVRPMYD-GKYIRSLTKEILEDITIKDTL-TNLIIPTFDIKRLQ-PVIFSSNDVKKGAL 171 (223)
Q Consensus 95 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~l~~~~~~~~l~d~~-~~~~v~a~d~~~~~-~~~f~~~~~~~~~~ 171 (223)
.+.... .++ ...+++.+++.++........ .++.|++|++.+++ ..+++.+..
T Consensus 66 ~~~~~~-------------------~~~~~~~l~~~l~~~lp~d~~e~~~~~~l~i~~T~~~~~~~~~~v~~f~~----- 121 (233)
T cd07224 66 CRSNGT-------------------AFRLGGVLRDELDKTLPDDAHERCNRGRIRVAVTQLFPVPRGLLVSSFDS----- 121 (233)
T ss_pred HHhcCC-------------------cccHHHHHHHHHHHHcCcHHHHHhcCCCEEEEEEecccCCCceEEEecCC-----
Confidence 322111 111 245677888888876666666 78999999998764 666665543
Q ss_pred CCchHHHHHHhhccCCCCCCc---eeeeccCCCCCCcccceeeeeeeccCCCCC
Q 027406 172 KNARLADICVGTSAAPTYLPA---HHFVTKDSTTGDTCSFDLIDGGVAANDPVI 222 (223)
Q Consensus 172 ~~~~l~~av~AS~A~P~~F~p---~~i~~~~~~~G~~~~~~~iDGG~~~N~P~l 222 (223)
+..+.+|++|||++|++|+| +.++++ .|+|||+.+|.|+.
T Consensus 122 -~~~l~~al~AS~~iP~~~~p~~~v~~~G~----------~~vDGG~~~~~P~~ 164 (233)
T cd07224 122 -KSDLIDALLASCNIPGYLAPWPATMFRGK----------LCVDGGFALFIPPT 164 (233)
T ss_pred -cchHHHHHHHhccCCcccCCCCCeeECCE----------EEEeCCcccCCCCC
Confidence 23589999999999999984 677643 89999999999975
No 31
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=99.94 E-value=3.5e-27 Score=183.41 Aligned_cols=182 Identities=20% Similarity=0.274 Sum_probs=103.7
Q ss_pred EEeeCCchhhHHHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHHHhhCCc
Q 027406 15 LSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHCPK 94 (223)
Q Consensus 15 L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~~~~ 94 (223)
|||+|||+||++++|+|++|. .+..+.||+|+|||+||++|++++.+.... ...+.+.+++......
T Consensus 1 LvlsGGG~rg~~~~G~l~~L~----------~~~~~~~d~i~GtS~Gal~a~~~~~~~~~~---~~~~~~~~~~~~~~~~ 67 (204)
T PF01734_consen 1 LVLSGGGSRGAYQAGVLKALG----------QGLGERFDVISGTSAGALNAALLALGYDPD---ESLDQFYDLWRNLFFS 67 (204)
T ss_dssp EEE---CCGCCCCHHHHHHHC----------CTGCCT-SEEEEECCHHHHHHHHHTC-TCC---CCCCHHCCHHHHHHHC
T ss_pred CEEcCcHHHHHHHHHHHHHHh----------hhhCCCccEEEEcChhhhhHHHHHhCCCHH---HHHHHHHHHHHhhccc
Confidence 899999999999999999991 146788999999999999999999874221 2233444444433111
Q ss_pred cc-CCCccCCchhHHHHhhhc-cccccCCChHHHHHHHHHHhcccccccccCceEEE-----------------eeeCCC
Q 027406 95 IF-PQLSRGGNFLRSIISSLS-KWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIP-----------------TFDIKR 155 (223)
Q Consensus 95 ~f-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~l~d~~~~~~v~-----------------a~d~~~ 155 (223)
.. ..... .......... ......++...+++.+++.+++....+........ ......
T Consensus 68 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (204)
T PF01734_consen 68 SNLMKRRR---PRKAFRRLRGLFGGSGLFDSEPLRDWLRRVLGDLTLEEFSARLPRAIGAADDFTTRSRSIFQSPSSPFR 144 (204)
T ss_dssp CCTH---------HHT-------SSS-SS--HHHHHHHHHHHCCHCHHHHCTCECCC-EE--------------EEECCC
T ss_pred cccccccc---cccccccccccccCccchhHHHHHHHHHHhccccCHHHhhhcccccccccccccccccccccccccccc
Confidence 11 00000 0000001111 22456789999999999999876655433221111 000011
Q ss_pred CcceeecCCCccCCCCCCchHHHHHHhhccCCCCCCceeeeccCCCCCCcccceeeeeeeccCCCCC
Q 027406 156 LQPVIFSSNDVKKGALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPVI 222 (223)
Q Consensus 156 ~~~~~f~~~~~~~~~~~~~~l~~av~AS~A~P~~F~p~~i~~~~~~~G~~~~~~~iDGG~~~N~P~l 222 (223)
.............+..++..+++|++||+|+|++|+|+++++. .|+|||+.+|+|+.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~l~~a~~AS~a~P~~~~p~~~~g~----------~~~DGG~~~n~P~~ 201 (204)
T PF01734_consen 145 ASSNNFNESRSRYDFDPDVPLWDAVRASSAIPGIFPPVKIDGE----------YYIDGGILDNNPIE 201 (204)
T ss_dssp CECCEEECCCCCTTCCCTSBHHHHHHHCCHSTTTSTTEEETS-----------EEEEGGGCS---GG
T ss_pred ccccccccccccccCCCcchHHHhhChhccccccCCCEEECCE----------EEEecceeeccccc
Confidence 1111111111122335688999999999999999999999754 89999999999974
No 32
>cd07223 Pat_PNPLA5-mammals Patatin-like phospholipase domain containing protein 5. PNPLA5, also known as GS2L (GS2-like), plays a role in regulation of adipocyte differentiation. PNPLA5 is expressed in brain tissue in high mRNA levels and low levels in liver tissue. There is no concrete evidence in support of the enzymatic activity of GS2L. This family includes patatin-like proteins: GS2L (GS2-like) and PNPLA5 (Patatin-like phospholipase domain-containing protein 5) reported exclusively in mammals.
Probab=99.94 E-value=7.4e-26 Score=188.67 Aligned_cols=166 Identities=20% Similarity=0.169 Sum_probs=131.5
Q ss_pred EEEEEeeCCchhhHHHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHHHhh
Q 027406 12 ITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEH 91 (223)
Q Consensus 12 ~~~L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~ 91 (223)
.--|+|+|||.+|+||+||+++|.|+- +.+....+-|+|+|+|||+|++++.+ .+.+++.+...++
T Consensus 9 ~~~LsfSGgGflG~yHvGV~~~L~e~~-------p~ll~~~~~iaGaSAGAL~aa~~a~g-------~~~~~~~~~i~~i 74 (405)
T cd07223 9 GWNLSFSGAGYLGLYHVGVTECLRQRA-------PRLLQGARRIYGSSSGALNAVSIVCG-------KSADFCCSNLLGM 74 (405)
T ss_pred CEEEEEeCcHHHHHHHHHHHHHHHHhC-------chhhccCCeeeeeCHHHHHHHHHHhC-------CCHHHHHHHHHHH
Confidence 457999999999999999999999872 23445567899999999999999998 5667555544443
Q ss_pred CCcccCCCccCCchhHHHHhhhccccccCCC-hHHHHHHHHHHhcccccccccCceEEEeeeCCCCcceeecCCCccCCC
Q 027406 92 CPKIFPQLSRGGNFLRSIISSLSKWVRPMYD-GKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDVKKGA 170 (223)
Q Consensus 92 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~l~~~~~~~~l~d~~~~~~v~a~d~~~~~~~~f~~~~~~~~~ 170 (223)
.++.=. .. .+.+++.|+ .+.+++.|++.+.+........++.|+.|++.+++.++.++|..+
T Consensus 75 a~~~r~-~~-------------lG~~~p~f~l~~~lr~~L~~~LP~daHe~~sgrL~ISlT~l~~gknvlvS~F~Sr--- 137 (405)
T cd07223 75 VKHLER-LS-------------LGIFHPAYAPIEHIRQQLQESLPPNIHILASQRLGISMTRWPDGRNFIVTDFATR--- 137 (405)
T ss_pred HHHhhh-hc-------------cCCCCccccHHHHHHHHHHHhCCchhhHHhCCceEEEEEEccCCceEEecCCCCH---
Confidence 322100 00 122344444 467889999999988888888899999999999999999988764
Q ss_pred CCCchHHHHHHhhccCCCC--CCceeeeccCCCCCCcccceeeeeeeccCCCC
Q 027406 171 LKNARLADICVGTSAAPTY--LPAHHFVTKDSTTGDTCSFDLIDGGVAANDPV 221 (223)
Q Consensus 171 ~~~~~l~~av~AS~A~P~~--F~p~~i~~~~~~~G~~~~~~~iDGG~~~N~P~ 221 (223)
..|.+|+.|||.+|+| |.|+.+++. .|||||+.+|.|.
T Consensus 138 ---edLIqALlASc~IP~y~g~~P~~~rG~----------~yVDGGvsnNLP~ 177 (405)
T cd07223 138 ---DELIQALICTLYFPFYCGIIPPEFRGE----------RYIDGALSNNLPF 177 (405)
T ss_pred ---HHHHHHHHHhccCccccCCCCceECCE----------EEEcCcccccCCC
Confidence 4699999999999999 888888754 8999999999995
No 33
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=99.92 E-value=1.3e-24 Score=183.72 Aligned_cols=183 Identities=20% Similarity=0.215 Sum_probs=131.1
Q ss_pred eEEEEEeeCCchhhHHHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHHHh
Q 027406 11 KITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFE 90 (223)
Q Consensus 11 ~~~~L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~ 90 (223)
+..+|+|+|||++|++|+||+++|+++ +..+++|+|||+|||+|++++.. +.+|+.+++..
T Consensus 82 GrtAlvlsGGg~~G~~h~Gv~kaL~e~-----------gl~p~~i~GtS~Gaivaa~~a~~--------~~~e~~~~l~~ 142 (391)
T cd07229 82 GRTALVLQGGSIFGLCHLGVVKALWLR-----------GLLPRIITGTATGALIAALVGVH--------TDEELLRFLDG 142 (391)
T ss_pred CCEEEEecCcHHHHHHHHHHHHHHHHc-----------CCCCceEEEecHHHHHHHHHHcC--------CHHHHHHHHhc
Confidence 478999999999999999999999985 34689999999999999999974 45777777654
Q ss_pred hCCc--ccCC---------CccCC--chhHHHHhhhccccccCCChHHHHHHHHHHhccccccccc----CceEEEeeeC
Q 027406 91 HCPK--IFPQ---------LSRGG--NFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTL----TNLIIPTFDI 153 (223)
Q Consensus 91 ~~~~--~f~~---------~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~d~~----~~~~v~a~d~ 153 (223)
..-. .|.. ..+.| .+...+.++++ .+..+|.+.|++.+++.+|+.+|+|.. +.+.|++++.
T Consensus 143 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~r~l~--~G~l~D~~~l~~~lr~~lgd~TFeEAy~rTgriLnItv~~~ 220 (391)
T cd07229 143 DGIDLSAFNRLRGKKSLGYSGYGWLGTLGRRIQRLLR--EGYFLDVKVLEEFVRANLGDLTFEEAYARTGRVLNITVAPS 220 (391)
T ss_pred cchhhhhhhhhccccccccccccccchHHHHHHHHHc--CCCcccHHHHHHHHHHHcCCCcHHHHHHhhCCEEEEEEECC
Confidence 2111 1111 01110 12222233222 456899999999999999999998864 5677777775
Q ss_pred C-CCcceeecCCCccCCCCCCchHHHHHHhhccCCCCCC-ceeeeccCCCCCCcccc----------eeeeeeeccCCC
Q 027406 154 K-RLQPVIFSSNDVKKGALKNARLADICVGTSAAPTYLP-AHHFVTKDSTTGDTCSF----------DLIDGGVAANDP 220 (223)
Q Consensus 154 ~-~~~~~~f~~~~~~~~~~~~~~l~~av~AS~A~P~~F~-p~~i~~~~~~~G~~~~~----------~~iDGG~~~N~P 220 (223)
. .+.|.+++...+ +|+.||.||+||||.|+.|+ |+.+-.++. +|+...+ ...||.+....|
T Consensus 221 ~~~~~p~LLNylTa-----PnVlIwsAv~aS~a~p~~~~~~~~L~~Kd~-~G~ivp~~~~~~~~~~~~~~dgs~~~DlP 293 (391)
T cd07229 221 AVSGSPNLLNYLTA-----PNVLIWSAALASNASSAALYRSVTLLCKDE-TGSIVPWPPVQVLFFRSWRGANYSERESP 293 (391)
T ss_pred CCCCCCeeeecCCC-----CCchHHHHHHHHcCCccccCCCceEEEECC-CCCEeeCCCcccccccccccCCCccccCh
Confidence 5 567788765443 58999999999999999887 888876654 3532211 245787776666
No 34
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=99.92 E-value=2.2e-24 Score=176.59 Aligned_cols=144 Identities=18% Similarity=0.332 Sum_probs=110.1
Q ss_pred eEEEEEeeCCchhhHHHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHHHh
Q 027406 11 KITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFE 90 (223)
Q Consensus 11 ~~~~L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~ 90 (223)
+..+|+|+|||++|++|+||+++|+++ ...+++|+|+|+||++|++++.+ +.+|+.+++
T Consensus 67 G~~aLvlsGGg~~g~~h~GVlkaL~e~-----------gl~p~~i~GsSaGAivaa~~~~~--------t~~El~~~~-- 125 (323)
T cd07231 67 GRTALLLSGGAALGTFHVGVVRTLVEH-----------QLLPRVIAGSSVGSIVCAIIATR--------TDEELQSFF-- 125 (323)
T ss_pred CCEEEEEcCcHHHHHHHHHHHHHHHHc-----------CCCCCEEEEECHHHHHHHHHHcC--------CHHHHHHHH--
Confidence 467999999999999999999999985 34589999999999999999974 446666554
Q ss_pred hCCcccCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccccccc----cCceEEEeeeCCCCc-ceeecCCC
Q 027406 91 HCPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDT----LTNLIIPTFDIKRLQ-PVIFSSND 165 (223)
Q Consensus 91 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~d~----~~~~~v~a~d~~~~~-~~~f~~~~ 165 (223)
++.+|+.+|.|. .+.+.|++++...++ +.+++...
T Consensus 126 ----------------------------------------~~~~gd~TF~Eay~~tgr~lnI~v~~~~~~~~~~lln~~T 165 (323)
T cd07231 126 ----------------------------------------RALLGDLTFQEAYDRTGRILGITVCPPRKSEPPRLLNYLT 165 (323)
T ss_pred ----------------------------------------HHHcCcccHHHHHhccCCEEEEEEecccCCCCceeeccCC
Confidence 333445555443 567778888877664 55665443
Q ss_pred ccCCCCCCchHHHHHHhhccCCCCCCceeeeccCCCCCCccc----------ceeeeeeeccCCCC
Q 027406 166 VKKGALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCS----------FDLIDGGVAANDPV 221 (223)
Q Consensus 166 ~~~~~~~~~~l~~av~AS~A~P~~F~p~~i~~~~~~~G~~~~----------~~~iDGG~~~N~P~ 221 (223)
. +|+.+|.||+||||+|++|+|+.+-.++. +|+... ..++||++..+.|.
T Consensus 166 ~-----Pnv~I~sAv~aS~a~P~if~~~~L~~Kd~-~G~ivp~~~~~~~~~~~~~~DGs~~~dlP~ 225 (323)
T cd07231 166 S-----PHVVIWSAVAASCAFPGLFEAQELMAKDR-FGEIVPYHPPGKVSSPRRWRDGSLEQDLPM 225 (323)
T ss_pred C-----CCcHHHHHHHHHcCChhhccceeEEEECC-CCCEeeccCCCccccccccccCcccccCch
Confidence 3 57999999999999999999999766653 453322 35899999999985
No 35
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=99.92 E-value=9.7e-25 Score=178.47 Aligned_cols=142 Identities=18% Similarity=0.264 Sum_probs=103.9
Q ss_pred eEEEEEeeCCchhhHHHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHHHh
Q 027406 11 KITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFE 90 (223)
Q Consensus 11 ~~~~L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~ 90 (223)
+..+|+|+|||+||+||+||+++|+++ ...+|+|+|||+||++|++++.+. .+|+
T Consensus 68 g~~aLvlsGGg~~g~~h~Gvl~aL~e~-----------~l~~~~i~GtSaGAi~aa~~~~~~--------~~El------ 122 (298)
T cd07206 68 GRTALMLSGGASLGLFHLGVVKALWEQ-----------DLLPRVISGSSAGAIVAALLGTHT--------DEEL------ 122 (298)
T ss_pred CCEEEEEcCcHHHHHHHHHHHHHHHHc-----------CCCCCEEEEEcHHHHHHHHHHcCC--------cHHH------
Confidence 467999999999999999999999884 235799999999999999999862 1333
Q ss_pred hCCcccCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccccccccCceEEEeeeCCCCcceeecCCCccCCC
Q 027406 91 HCPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDVKKGA 170 (223)
Q Consensus 91 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~d~~~~~~v~a~d~~~~~~~~f~~~~~~~~~ 170 (223)
+... .++ +.+ ..+.+.+.|++++..+++...|-||...
T Consensus 123 -----~gdl-------------------------Tf~----EA~-----~~tgr~lnI~vt~~~~~~~~~lln~~ts--- 160 (298)
T cd07206 123 -----IGDL-------------------------TFQ----EAY-----ERTGRIINITVAPAEPHQNSRLLNALTS--- 160 (298)
T ss_pred -----HcCC-------------------------CHH----HHH-----HhcCCEEEEEEEECCCCCceEEecccCC---
Confidence 1110 011 111 1234567788888888877666665532
Q ss_pred CCCchHHHHHHhhccCCCCCCceeeeccCCCCCCc----ccceeeeeeeccCCCC
Q 027406 171 LKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDT----CSFDLIDGGVAANDPV 221 (223)
Q Consensus 171 ~~~~~l~~av~AS~A~P~~F~p~~i~~~~~~~G~~----~~~~~iDGG~~~N~P~ 221 (223)
+|+.+|+|++||||+|++|+|+.+..++. +|.. ....|+|||+.+|.|.
T Consensus 161 -pnv~i~sAv~AS~slP~~f~pv~l~~k~~-~g~~~p~~~g~~~~DGgv~~~iPv 213 (298)
T cd07206 161 -PNVLIWSAVLASCAVPGVFPPVMLMAKNR-DGEIVPYLPGRKWVDGSVSDDLPA 213 (298)
T ss_pred -CchHHHHHHhhccCccccccCeEEEeecC-CCccccCCCCCcccCCCcCcchHH
Confidence 46789999999999999999999854432 1211 1247999999999995
No 36
>KOG2968 consensus Predicted esterase of the alpha-beta hydrolase superfamily (Neuropathy target esterase), contains cAMP-binding domains [General function prediction only]
Probab=99.91 E-value=3e-24 Score=191.24 Aligned_cols=167 Identities=23% Similarity=0.313 Sum_probs=127.9
Q ss_pred eEEEEEeeCCchhhHHHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHHHh
Q 027406 11 KITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFE 90 (223)
Q Consensus 11 ~~~~L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~ 90 (223)
.--.|||.|||+||++|+|||++|||. +..+|+|.|||+||+++++++-.. +...+....
T Consensus 838 naIgLVLGGGGARG~ahiGvl~ALeE~-----------GIPvD~VGGTSIGafiGaLYA~e~-------d~~~v~~ra-- 897 (1158)
T KOG2968|consen 838 NAIGLVLGGGGARGAAHIGVLQALEEA-----------GIPVDMVGGTSIGAFIGALYAEER-------DLVPVFGRA-- 897 (1158)
T ss_pred CeEEEEecCcchhhhhHHHHHHHHHHc-----------CCCeeeeccccHHHhhhhhhhccC-------cchHHHHHH--
Confidence 356799999999999999999999995 467999999999999999999642 111111111
Q ss_pred hCCcccCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccccccccCceEEEeeeCCCCcceeecCCCccCCC
Q 027406 91 HCPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDVKKGA 170 (223)
Q Consensus 91 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~d~~~~~~v~a~d~~~~~~~~f~~~~~~~~~ 170 (223)
++.+.+-. +++..+.. +.+...+.|++..+..-+.+.|++..++|++.+.++.+||+++....+.++
T Consensus 898 --k~f~~~ms---siw~~llD-LTyP~tsmftGh~FNrsI~~~Fgd~~IEDlWi~yfciTTdIt~S~mriH~~------- 964 (1158)
T KOG2968|consen 898 --KKFAGKMS---SIWRLLLD-LTYPITSMFTGHEFNRSIHSTFGDVLIEDLWIPYFCITTDITSSEMRVHRN------- 964 (1158)
T ss_pred --HHHHHHHH---HHHHHHHh-ccccchhccchhhhhhHHHHHhcccchhhhhheeeecccccchhhhhhhcC-------
Confidence 11111100 12222222 123356689999999999999999999999999999999999888877654
Q ss_pred CCCchHHHHHHhhccCCCCCCceeeeccCCCCCCcccceeeeeeeccCCCC
Q 027406 171 LKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPV 221 (223)
Q Consensus 171 ~~~~~l~~av~AS~A~P~~F~p~~i~~~~~~~G~~~~~~~iDGG~~~N~P~ 221 (223)
..+|..|||||++-+|.||..-... | ..++|||..+|.|+
T Consensus 965 ---G~~WrYvRASMsLaGylPPlcdp~d----G----hlLlDGGYvnNlPa 1004 (1158)
T KOG2968|consen 965 ---GSLWRYVRASMSLAGYLPPLCDPKD----G----HLLLDGGYVNNLPA 1004 (1158)
T ss_pred ---CchHHHHHhhccccccCCCCCCCCC----C----CEEecccccccCcH
Confidence 6799999999999999999974322 3 48999999999996
No 37
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=99.90 E-value=2.5e-23 Score=187.75 Aligned_cols=198 Identities=19% Similarity=0.287 Sum_probs=132.2
Q ss_pred EEEEEeeCCchhhHHHHHHHHHHHHHhhccC------------------------CCCCccccccceeeeccHHHHHHHH
Q 027406 12 ITVLSIDGGGVKGIIPGTILAFLESRLQDLD------------------------GPNARIADYFDIVAGTSTGGLIGTM 67 (223)
Q Consensus 12 ~~~L~LdGGG~rG~~~~gvL~~L~~~~~~~~------------------------g~~~~~~~~fd~i~GtS~Gai~a~~ 67 (223)
.-+|||.|||++++|+.||+++|-+...... +.+.+....||+|+|||+|||||++
T Consensus 3 RlalVl~GG~slA~y~~GV~~ei~~l~~~~~~~~~~~~~~~~~~~~~Y~~l~~~l~~~~~~~~~~d~iaGTSAGAInaa~ 82 (739)
T TIGR03607 3 RLALVMYGGVSLAVYMHGVTKEINRLVRASRAYHGYPDEASAGTEAVYGALLELLGAHLRLRVRVDVISGTSAGGINGVL 82 (739)
T ss_pred eEEEEecCcHHHHHHHHHHHHHHHHHhhhhcccccccccccccchhHHHHHHHHhhhhhccCCCCceEEeeCHHHHHHHH
Confidence 3579999999999999999999977554311 0111346789999999999999999
Q ss_pred hcCCCCCCCCcccHHHHHHHHHhhCC--cccCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhccc------cc
Q 027406 68 LTAPNKDGRPMYAAKDINNFYFEHCP--KIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDI------TI 139 (223)
Q Consensus 68 l~~~~~~~~~~~s~~~~~~~~~~~~~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~------~l 139 (223)
++.+.. ..++.+++.++|.+... +.+...... ..+. .-..+.|+++.++++|++.+++. ++
T Consensus 83 lA~~~~---~g~~~~~L~~~W~~~~d~~~lLd~~~~~-------~~~~-~~~~sLl~G~~l~~~L~~~L~~~~~~~~~~~ 151 (739)
T TIGR03607 83 LAYALA---YGADLDPLRDLWLELADIDALLRPDAKA-------WPRL-RRPGSLLDGEYFLPLLLDALAAMVRAGPAGP 151 (739)
T ss_pred HHcccc---cCCCHHHHHHHHHhcccHHhhcChhhhc-------cccc-cCCccccccHHHHHHHHHHHHHhCCCCCCCc
Confidence 998431 12688999999887643 223221100 0000 11234688899999999998753 34
Q ss_pred cccc-----CceEEEeeeCCCCcceee-cCCC---------------c-----cC----CCCCCchHHHHHHhhccCCCC
Q 027406 140 KDTL-----TNLIIPTFDIKRLQPVIF-SSND---------------V-----KK----GALKNARLADICVGTSAAPTY 189 (223)
Q Consensus 140 ~d~~-----~~~~v~a~d~~~~~~~~f-~~~~---------------~-----~~----~~~~~~~l~~av~AS~A~P~~ 189 (223)
.+.+ ..++||+||+ .|+...+ .++. . .. +..+...|..|+|||||+|++
T Consensus 152 ~~lp~~~~~~dL~VTaTDl-~G~~~~l~dd~~~~~~e~~hr~~f~F~~~~~~~~~~~d~~~~~~~~lA~AaRaSaSfP~a 230 (739)
T TIGR03607 152 SLLPTGTRPLDLFVTATDL-RGRSTRLFDDDGTVVEEREHRGVFRFTEAGRAGGRLSDFDAANAPRLAFAARATASFPGA 230 (739)
T ss_pred cccccCCCCccEEEEEEcC-CCcEEEeecCCCcccccccccceeeeecccCCCCCCccccccccHHHHHHHHHhcCCCcc
Confidence 4443 5789999999 5544322 2221 0 00 112237899999999999999
Q ss_pred CCceeeeccCC------------------------CCC-CcccceeeeeeeccCCCC
Q 027406 190 LPAHHFVTKDS------------------------TTG-DTCSFDLIDGGVAANDPV 221 (223)
Q Consensus 190 F~p~~i~~~~~------------------------~~G-~~~~~~~iDGG~~~N~P~ 221 (223)
|+|+++.+.+. ..+ .....+|+|||+.+|-|.
T Consensus 231 F~Pv~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vDGGvldN~Pl 287 (739)
T TIGR03607 231 FPPSRLAEIDDVLARRFLPWGGRDAFLHPDFPDYAELGTTPRPRYVVDGGVLDNRPF 287 (739)
T ss_pred cCceehhhhhHHHHhccCCCCccccccccccccccccCCCccceEEeecccccCcch
Confidence 99997642110 011 124568999999999885
No 38
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=99.90 E-value=3e-23 Score=156.77 Aligned_cols=138 Identities=24% Similarity=0.315 Sum_probs=100.1
Q ss_pred EEeeCCchhhHHHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHHHhhCCc
Q 027406 15 LSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHCPK 94 (223)
Q Consensus 15 L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~~~~ 94 (223)
|+|+|||+||++++|||++|+++ .+.+.||+++|||+||+++++++..
T Consensus 1 l~~~GGg~~~~~~~gvl~~l~~~---------~~~~~~~~~~G~SaGa~~~~~~~p~----------------------- 48 (155)
T cd01819 1 LSFSGGGFRGMYHAGVLSALAER---------GLLDCVTYLAGTSGGAWVAATLYPP----------------------- 48 (155)
T ss_pred CEEcCcHHHHHHHHHHHHHHHHh---------CCccCCCEEEEEcHHHHHHHHHhCh-----------------------
Confidence 68999999999999999999986 2446899999999999999998710
Q ss_pred ccCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccccccccCceEEEeeeCCCCcceeecCCCccCCCCCCc
Q 027406 95 IFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDVKKGALKNA 174 (223)
Q Consensus 95 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~d~~~~~~v~a~d~~~~~~~~f~~~~~~~~~~~~~ 174 (223)
.+ .|+.. ..+.+. ++...++.|.+|++.+|+..++..... ..
T Consensus 49 ~~-----------------------~~~~~-~~~~~~--------~~~~~~~~i~~T~~~tG~~~~~~~~~~------~~ 90 (155)
T cd01819 49 SS-----------------------SLDNK-PRQSLE--------EALSGKLWVSFTPVTAGENVLVSRFVS------KE 90 (155)
T ss_pred hh-----------------------hhhhh-hhhhhH--------HhcCCCeEEEEEEcCCCcEEEEecccc------ch
Confidence 00 01100 011111 355678899999999999999875432 24
Q ss_pred hHHHHHHhhccCCCCCCceeeecc--CCCCCCcccceeeeeeeccCCCCC
Q 027406 175 RLADICVGTSAAPTYLPAHHFVTK--DSTTGDTCSFDLIDGGVAANDPVI 222 (223)
Q Consensus 175 ~l~~av~AS~A~P~~F~p~~i~~~--~~~~G~~~~~~~iDGG~~~N~P~l 222 (223)
.++++++|||++|.+|+++.+... ...+++.++..|+|||+.+|+|+.
T Consensus 91 ~~~~av~aS~s~P~~f~~v~~~~~~~~~~~~~~~g~~lVDGG~~~~iP~~ 140 (155)
T cd01819 91 ELIRALFASGSWPSYFGLIPPAELYTSKSNLKEKGVRLVDGGVSNNLPAP 140 (155)
T ss_pred HHHHHHhHHhhhhhhcCCcccccccccccccccCCeEEeccceecCcCCc
Confidence 689999999999999998765100 000111224589999999999975
No 39
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=99.88 E-value=2.1e-22 Score=158.94 Aligned_cols=165 Identities=20% Similarity=0.235 Sum_probs=111.5
Q ss_pred eEEEEEeeCCchhhHHHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHHHh
Q 027406 11 KITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFE 90 (223)
Q Consensus 11 ~~~~L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~ 90 (223)
...+|+++|||+||++++|||.++... -..+||.++||||||.+++.+.+.+ +.++..-+.+ |..
T Consensus 10 ~kvaLV~EGGG~RgifTAGVLD~fl~a----------~~~~f~~~~GvSAGA~n~~aYls~Q----~gra~~~~~~-yt~ 74 (292)
T COG4667 10 GKVALVLEGGGQRGIFTAGVLDEFLRA----------NFNPFDLVVGVSAGALNLVAYLSKQ----RGRARRVIVE-YTT 74 (292)
T ss_pred CcEEEEEecCCccceehHHHHHHHHHh----------ccCCcCeeeeecHhHHhHHHHhhcC----CchHHHHHHH-hhc
Confidence 567999999999999999999999842 1357999999999999999888763 2222222222 222
Q ss_pred hCCcccCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHH---hcccccccccCceEEEeeeCCCCcceeecCCCcc
Q 027406 91 HCPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEI---LEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDVK 167 (223)
Q Consensus 91 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~l~d~~~~~~v~a~d~~~~~~~~f~~~~~~ 167 (223)
- ++.|... ++ ++ .+..++...+-+.+-+. |+..++.....+.++.+++..+++...+..-
T Consensus 75 d-~ry~~~~-------~~----vr--~gn~~n~d~~~~~~~~~~~~fD~~tf~~~~~k~~~~~~~~~~g~~~~~~~~--- 137 (292)
T COG4667 75 D-RRYFGPL-------SF----VR--GGNYFNLDWAFEETPQKLFPFDFDTFSQDKGKFFYMATCRQDGEAVYYFLP--- 137 (292)
T ss_pred c-hhhcchh-------hh----hc--cCcccchHHHHhhccCcCCCccHHHHhcccCCeEEEEEeccCCccceeecc---
Confidence 1 1223221 11 11 12334433322222111 2334556667789999999999886655331
Q ss_pred CCCCCCchHHHHHHhhccCCCCCCceeeeccCCCCCCcccceeeeeeeccCCCC
Q 027406 168 KGALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPV 221 (223)
Q Consensus 168 ~~~~~~~~l~~av~AS~A~P~~F~p~~i~~~~~~~G~~~~~~~iDGG~~~N~P~ 221 (223)
+...+.+++|||||+|+|-++++|++. .|+|||+.+..|+
T Consensus 138 ----~~~~~m~viRASSaiPf~~~~V~i~G~----------~YlDGGIsdsIPv 177 (292)
T COG4667 138 ----DVFNWLDVIRASSAIPFYSEGVEINGK----------NYLDGGISDSIPV 177 (292)
T ss_pred ----cHHHHHHHHHHhccCCCCCCCeEECCE----------ecccCcccccccc
Confidence 235678999999999988899999865 8999999999886
No 40
>KOG2214 consensus Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=99.76 E-value=1.6e-18 Score=147.57 Aligned_cols=181 Identities=17% Similarity=0.307 Sum_probs=130.1
Q ss_pred eEEEEEeeCCchhhHHHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHHHh
Q 027406 11 KITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFE 90 (223)
Q Consensus 11 ~~~~L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~ 90 (223)
+..+|+|+||+.-|++|+|||+.|-++ + -.+.+|+|+|+||++|++++.. +-+|+..++..
T Consensus 173 GrTAL~LsGG~tFGlfH~GVlrtL~e~---------d--LlP~IIsGsS~GaivAsl~~v~--------~~eEl~~Ll~~ 233 (543)
T KOG2214|consen 173 GRTALILSGGATFGLFHIGVLRTLLEQ---------D--LLPNIISGSSAGAIVASLVGVR--------SNEELKQLLTN 233 (543)
T ss_pred CceEEEecCCchhhhhHHHHHHHHHHc---------c--ccchhhcCCchhHHHHHHHhhc--------chHHHHHHhcc
Confidence 478999999999999999999999875 2 2478999999999999999975 56777777765
Q ss_pred hCC---cccCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccccccccC---c---eEEEeeeCCCCcceee
Q 027406 91 HCP---KIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLT---N---LIIPTFDIKRLQPVIF 161 (223)
Q Consensus 91 ~~~---~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~d~~~---~---~~v~a~d~~~~~~~~f 161 (223)
.-. .+|..... ++...+.+.+. .+..+|...+...+++.+++.++.+... + +.|+..+. .+.|.++
T Consensus 234 ~~~~~~~if~dd~~--n~~~~ikr~~~--~G~~~Di~~l~~~~~~~~~~lTFqEAY~rTGrIlNItV~p~s~-~e~P~lL 308 (543)
T KOG2214|consen 234 FLHSLFNIFQDDLG--NLLTIIKRYFT--QGALFDISHLACVMKKRLGNLTFQEAYDRTGRILNIVVPPSSK-SEPPRLL 308 (543)
T ss_pred chHhhhhhhcCcch--hHHHHHHHHHh--cchHHHHHHHHHHHHHHhcchhHHHHHHhhCceEEEEECcccc-CCChhHh
Confidence 422 34555442 23333333322 4667999999999999999888877542 3 33333333 3677777
Q ss_pred cCCCccCCCCCCchHHHHHHhhccCCCCCCceeeeccCCCCCCc-------ccceeeeeeeccCCCC
Q 027406 162 SSNDVKKGALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDT-------CSFDLIDGGVAANDPV 221 (223)
Q Consensus 162 ~~~~~~~~~~~~~~l~~av~AS~A~P~~F~p~~i~~~~~~~G~~-------~~~~~iDGG~~~N~P~ 221 (223)
....+ +|+.+|.||.||||.|++|++..+-.++. .|+. ....+.||.+...+|-
T Consensus 309 NylTa-----PnVLIWSAV~aScs~pgif~~~~Ll~Kd~-t~ei~p~~~~~~~~r~~dgsl~~d~P~ 369 (543)
T KOG2214|consen 309 NYLTA-----PNVLIWSAVCASCSVPGIFESTPLLAKDL-TNEIEPFIVTFSEPRFMDGSLDNDLPY 369 (543)
T ss_pred hccCC-----CceehhHHHHHhcccccccCccHHHHhhc-cCcEeeccCCccchhhccCcccccCcH
Confidence 66554 47899999999999999999876644432 1211 1236889988877774
No 41
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=99.73 E-value=7.6e-18 Score=146.83 Aligned_cols=218 Identities=41% Similarity=0.672 Sum_probs=171.4
Q ss_pred CCCCCCCeEEEEEeeCCchhhHHHHHHHHHHHHHhhccCCCC--Cccccccce-eeeccHHHHHHHHhcCCCCCCCCccc
Q 027406 4 RTIAKGKKITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPN--ARIADYFDI-VAGTSTGGLIGTMLTAPNKDGRPMYA 80 (223)
Q Consensus 4 ~~~~~~~~~~~L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~--~~~~~~fd~-i~GtS~Gai~a~~l~~~~~~~~~~~s 80 (223)
.+|......++|+|||||+||+.+.-.+..++.+++.+.|.. +++.++||+ +.|+++|+++++++-.....++|++.
T Consensus 27 ~~~~~~~~~~~lsld~gg~~gi~~~~s~~~~~~~l~~~~g~~~~~~~a~~fDv~~~g~~~~gl~~aml~a~~~~~~P~~~ 106 (503)
T KOG0513|consen 27 YDPSYGGLVTILSLDGGGSRGINQGVSLAYLELRLQNIDGDPSAARLADYFDVSIAGTNTGGLITAMLFAPNDCGRPRFG 106 (503)
T ss_pred CCccccccceEEEEcCccceehhhhhhhcccHHHHHhccCChHhhHhhhccCceeeccCCchhhhhhhhccccccCcccc
Confidence 456666789999999999999999999999999999999875 789999999 99999999999999988878899999
Q ss_pred HHHH-HHHHHhhCCcccCCCccCCchhHHHHhhh-ccccccCCCh------HHHHHHHHHHhcccccccccCc----eEE
Q 027406 81 AKDI-NNFYFEHCPKIFPQLSRGGNFLRSIISSL-SKWVRPMYDG------KYIRSLTKEILEDITIKDTLTN----LII 148 (223)
Q Consensus 81 ~~~~-~~~~~~~~~~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~------~~l~~~l~~~~~~~~l~d~~~~----~~v 148 (223)
+.++ +.++.+.+..+|.+..-.....+.+...+ ....+..++. +......++.+|+.++.....+ +.+
T Consensus 107 a~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~~~~~~~g~t~L~~tl~~~~~~~~i 186 (503)
T KOG0513|consen 107 ATDILWKFNLEKAPKLLEKFDDPNFIKGDLNLALRILVSGDKYSGAEVLLTKYEIADAREVLGNTKLHLTLTKENLLVVI 186 (503)
T ss_pred ccchhhhhhhcCCCccccccccccccccccccceeeeecCccccceeecccccccchhhhhcCCceeeeeccCCCcceEE
Confidence 9999 89999988888876531000000000001 1123344444 6666677778999999888888 999
Q ss_pred EeeeCCCCcceeecCCCccCC---CCCCchHHHHHHhh--ccCCCCCCc-eeeeccCCCCCCcccceeeeee-eccCCCC
Q 027406 149 PTFDIKRLQPVIFSSNDVKKG---ALKNARLADICVGT--SAAPTYLPA-HHFVTKDSTTGDTCSFDLIDGG-VAANDPV 221 (223)
Q Consensus 149 ~a~d~~~~~~~~f~~~~~~~~---~~~~~~l~~av~AS--~A~P~~F~p-~~i~~~~~~~G~~~~~~~iDGG-~~~N~P~ 221 (223)
++.|++...|.+|+.|....+ +.-+..+++.|.++ +|.|.+|+| +.+...+. .|......++||| +..|||+
T Consensus 187 ~~ldl~~~~P~lf~~~~~~~~~~v~~~~~~~~~~c~~t~~sa~~~~f~~~~~~~~~Dg-~~~~~~~~~~~~g~~~m~n~t 265 (503)
T KOG0513|consen 187 PCLDLKSLTPNLFSIYDALGTKIVPLLDFKAIDICIDTYGSAAPTIFPPILGFPSEDG-QGIKTVCVLLDGGDIAMNNPT 265 (503)
T ss_pred EeeccCcCCceeeeeeccccccchhhhhhhhhhhhhccccccCccccCcccccccccc-cccceeeEEecchhhhccCch
Confidence 999999999999998877665 55677889999999 999999999 66665542 2333456799999 9999996
Q ss_pred C
Q 027406 222 I 222 (223)
Q Consensus 222 l 222 (223)
.
T Consensus 266 ~ 266 (503)
T KOG0513|consen 266 L 266 (503)
T ss_pred H
Confidence 4
No 42
>KOG3773 consensus Adiponutrin and related vesicular transport proteins; predicted alpha/beta hydrolase [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.40 E-value=3.3e-13 Score=110.02 Aligned_cols=167 Identities=20% Similarity=0.201 Sum_probs=124.4
Q ss_pred EEEEEeeCCchhhHHHHHHHHHHHHHhhccCCCCCccccccce-eeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHHHh
Q 027406 12 ITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDI-VAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFE 90 (223)
Q Consensus 12 ~~~L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~-i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~ 90 (223)
...|+++|-|..|+||.|+-..+-+...+ + .-|. |.|.|+|+++|..+..+ .+.+++....-+
T Consensus 6 r~~lSfsg~gFlg~yh~gaa~~l~~~ap~-------l--l~~~~~~GaSagsl~a~~ll~~-------~~l~~a~~~l~~ 69 (354)
T KOG3773|consen 6 RMNLSFSGCGFLGIYHVGAANCLPRHAPR-------L--LKDRSIAGASAGSLVACDLLCG-------LSLEEATGELYK 69 (354)
T ss_pred hhheeecCCceeEEEecchHHHHHHHHHH-------H--hccccccCcccchHHHhhhhcc-------ccHHHHHHHHHH
Confidence 46799999999999999999888776532 1 2244 99999999999999887 467777766555
Q ss_pred hCCcccCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccccccccCceEEEeeeCCCCcceeecCCCccCCC
Q 027406 91 HCPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDVKKGA 170 (223)
Q Consensus 91 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~d~~~~~~v~a~d~~~~~~~~f~~~~~~~~~ 170 (223)
+..++-.+. +..+.-+....+.+++.|++.+.+.-......++.|.-|...+++-++.++|...
T Consensus 70 ~v~e~~~~s-------------~g~~tP~f~~~~~l~~~le~~LPpda~~la~~rl~iSlTr~~~~~N~lis~F~s~--- 133 (354)
T KOG3773|consen 70 MVDEARRKS-------------LGAFTPGFNLSDRLRSGLEDFLPPDAHWLASGRLHISLTRVKDRENVLISEFPSR--- 133 (354)
T ss_pred HHHHHHHhh-------------cCCCCCCcCHHHHHHHHHHHhCChHHHHHhhcceeEEEEeeeehhhhhhhccccH---
Confidence 544432221 1112233445788888998888865544456789999999999998888887753
Q ss_pred CCCchHHHHHHhhccCCCCCC--ceeeeccCCCCCCcccceeeeeeeccCCCCCC
Q 027406 171 LKNARLADICVGTSAAPTYLP--AHHFVTKDSTTGDTCSFDLIDGGVAANDPVIN 223 (223)
Q Consensus 171 ~~~~~l~~av~AS~A~P~~F~--p~~i~~~~~~~G~~~~~~~iDGG~~~N~P~l~ 223 (223)
..+.||+++||=+|.|-+ |..+. ...|+|||+.+|.|.++
T Consensus 134 ---~~liq~L~~scyiP~ysg~~pp~~r----------g~~yiDGg~snnlP~~~ 175 (354)
T KOG3773|consen 134 ---DELIQALMCSCYIPMYSGLKPPIFR----------GVRYIDGGTSNNLPEAD 175 (354)
T ss_pred ---HHHHHHHHHhccCccccCCCCccee----------eEEEecccccccccccC
Confidence 569999999999999985 22333 34899999999999875
No 43
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=99.22 E-value=1.1e-11 Score=108.64 Aligned_cols=167 Identities=23% Similarity=0.332 Sum_probs=120.9
Q ss_pred CeEEEEEeeCCchhhHHHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHHH
Q 027406 10 KKITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYF 89 (223)
Q Consensus 10 ~~~~~L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~ 89 (223)
-...++..+|||++ ...+|-.++++... ..-.+||++.|||+|+++++.+... -+.+++...|.
T Consensus 292 ~~~~lv~~~G~G~~---~~q~l~~~e~~~~~------a~~~~f~w~~gtstg~~~~~~i~~~-------~s~d~v~~~y~ 355 (503)
T KOG0513|consen 292 VDDNLVLSDGGGIP---IIQVLYWIEKRCGT------AAWGYFDWFNGTSTGSTIMADIALD-------GSSDEVDRMYL 355 (503)
T ss_pred ccceEEEecCCCCh---hHHHHHhHHHhccc------ccccccccccccCcCceeehhhhhc-------ccHHHHHHHHH
Confidence 34678999999999 55667677776321 3457899999999999999998877 47788888888
Q ss_pred hhCCcccCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccccccccC-ceEEEe--eeCCCCcceeecCCCc
Q 027406 90 EHCPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLT-NLIIPT--FDIKRLQPVIFSSNDV 166 (223)
Q Consensus 90 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~d~~~-~~~v~a--~d~~~~~~~~f~~~~~ 166 (223)
.+...+|...+ +.|+...++.+++..+|+....|... ++.|+. +|..--+...+++|..
T Consensus 356 ~~k~~~F~~~r------------------~~~~~~~Ie~~~~~~~G~~~~~di~~~~~nl~~~~~~~~~~~l~~~rn~~~ 417 (503)
T KOG0513|consen 356 QMKDVVFDGLR------------------SEYNYVRIECAIDRLFGDAPSMDIDGIRLNLTGLLVDITGEELLMARNYRH 417 (503)
T ss_pred HHhHHhhhccc------------------CCCCccchhhhhhcccCccccccCCcchhhhhhhhccccHHHHHHhhcccc
Confidence 88778876633 45888889999999999866555544 333332 2223223345555554
Q ss_pred cCC----------------CCCCchHHHHHHhhccCCCCCCceeeeccCCCCCCcccceeeeeeeccCCCCCC
Q 027406 167 KKG----------------ALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPVIN 223 (223)
Q Consensus 167 ~~~----------------~~~~~~l~~av~AS~A~P~~F~p~~i~~~~~~~G~~~~~~~iDGG~~~N~P~l~ 223 (223)
+.+ ......+|++-|.|+++|..|++.. + .|+|||...|||++|
T Consensus 418 ~i~~~~~~~~~~snde~~~~~~~~l~we~~rrss~a~~~f~~~~--------~-----~~~d~~~~~~n~~ld 477 (503)
T KOG0513|consen 418 NINGGKPRSEEVSNDEALEEPAMQLVWEAKRRSSRAPPTFPPSE--------G-----KFIDGGLIANNPALD 477 (503)
T ss_pred ccccccccccccccchhhhhHHHHHHHHHHHhccCCCCcccccc--------c-----ceeecCccCCCcchh
Confidence 221 1123568999999999999998874 2 799999999999986
No 44
>cd00147 cPLA2_like Cytosolic phospholipase A2, catalytic domain; hydrolyses arachidonyl phospholipids. Catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms. Movement of the cPLA2 lid possibly exposes a greater hydrophobic surface and the active site. cPLA2 belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Calcium is required for cPLA2 to bind with membranes or phospholipids. Group IV cPLA2 includes six intercellular enzymes: cPLA2alpha, cPLA2beta, cPLA2gamma, cPLA2delta, cP
Probab=98.20 E-value=2.7e-06 Score=73.91 Aligned_cols=54 Identities=17% Similarity=0.259 Sum_probs=44.8
Q ss_pred CCeEEEEEeeCCchhh-HHHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHH-HHhcCC
Q 027406 9 GKKITVLSIDGGGVKG-IIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIG-TMLTAP 71 (223)
Q Consensus 9 ~~~~~~L~LdGGG~rG-~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a-~~l~~~ 71 (223)
+.+..+|+++|||.|+ ++++|+|++|.+. .+.+.+++|+|+|.|+.++ .+++..
T Consensus 40 ~~p~i~~~~sGGG~Ra~~~~~G~l~~l~~~---------gll~~~~yisg~Sgg~w~~~~~~~~~ 95 (438)
T cd00147 40 EVPVIAILGSGGGYRAMTGGAGALKALDEG---------GLLDCVTYLSGLSGSTWLMASLYSNP 95 (438)
T ss_pred cCceEEEEecCchHHHHHhhhHHHHHHHhC---------CchhccceeeeccchHHHHHHHHHcC
Confidence 4468899999999999 6899999999883 5788999999999999555 444444
No 45
>cd07202 cPLA2_Grp-IVC Group IVC cytoplasmic phospholipase A2; catalytic domain; Ca-independent. Group IVC cPLA2, a small 61 kDa protein, is a single domain alpha/beta hydrolase. It lacks a C2 domain; therefore, it has no Ca-dependence. Group IVC cPLA2 is also referred to as cPLA2-gamma. The cPLA2-gamma enzyme is predominantly found in cardiac and skeletal muscles, and to a lesser extent in the brain. Human cPLA2-gamma is approximately 30% identical to cPLA2-alpha. The catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms. Movement of the cPLA2 lid possibly exposes a greater hydrophobic surface and the active site. cPLA2 be
Probab=96.92 E-value=0.00083 Score=57.90 Aligned_cols=53 Identities=19% Similarity=0.238 Sum_probs=44.7
Q ss_pred CCeEEEEEeeCCchhhH-HHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcC
Q 027406 9 GKKITVLSIDGGGVKGI-IPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTA 70 (223)
Q Consensus 9 ~~~~~~L~LdGGG~rG~-~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~ 70 (223)
+.+...|+++|||.|.+ ..+|+|+++.++ .+.+...+++|.|.|+.....|..
T Consensus 37 ~~P~i~ia~SGGG~RAm~~~~G~l~al~~~---------GLl~~~tY~sglSGgsWl~~sLy~ 90 (430)
T cd07202 37 KAPVIAVLGSGGGLRAMIACLGVLSELDKA---------GLLDCVTYLAGVSGSTWCMSSLYT 90 (430)
T ss_pred cCCeEEEEecCccHHHHHhccHHHHHhhhC---------ChhhhhhhhccccchHHHHHHHHh
Confidence 44678999999999996 788999999874 578899999999999988655554
No 46
>cd07201 cPLA2_Grp-IVB-IVD-IVE-IVF Group IVB, IVD, IVE, and IVF cytosolic phospholipase A2; catalytic domain; Ca-dependent. Group IVB, IVD, IVE, and IVF cPLA2 consists of two domains: the regulatory C2 domain and alpha/beta hydrolase PLA2 domain. Group IVB, IVD, IVE, and IVF cPLA2 are also referred to as cPLA2-beta, -delta, -epsilon, and -zeta respectively. cPLA2-beta is approximately 30% identical to cPLA2-alpha and it shows low enzymatic activity compared to cPLA2alpha. cPLA2-beta hydrolyzes palmitic acid from 1-[14C]palmitoyl-2-arachidonoyl-PC and arachidonic acid from 1-palmitoyl-2[14C]arachidonoyl-PC, but not from 1-O-alkyl-2[3H]arachidonoyl-PC. cPLA2-delta, -epsilon, and -zeta are approximately 45-50% identical to cPLA2-beta and 31-37% identical to cPLA2-alpha. It's possible that cPLA2-beta, -delta, -epsilon, and -zeta may have arisen by gene duplication from an ancestral gene. The catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bon
Probab=96.27 E-value=0.0066 Score=53.95 Aligned_cols=53 Identities=17% Similarity=0.173 Sum_probs=43.8
Q ss_pred CCeEEEEEeeCCchhhH-HHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcC
Q 027406 9 GKKITVLSIDGGGVKGI-IPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTA 70 (223)
Q Consensus 9 ~~~~~~L~LdGGG~rG~-~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~ 70 (223)
..+..+++++|||.|.+ ..+|+|.++.+. .+.+...+++|.|.|+-....|..
T Consensus 51 ~~P~Igia~SGGGyRAml~gaG~l~al~~~---------GLLq~~tYlaGlSGg~Wl~gSLy~ 104 (541)
T cd07201 51 EVPVVAVMTTGGGTRALTSMYGSLLGLQKL---------GLLDCVSYITGLSGSTWTMATLYE 104 (541)
T ss_pred cCCeEEEEecCccHHHHHhccHHHHhhhcC---------CchhhhheecccCccHHHHHHHHc
Confidence 34678899999999997 678999999662 478899999999999999655554
No 47
>KOG1325 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=96.02 E-value=0.0066 Score=54.16 Aligned_cols=84 Identities=18% Similarity=0.289 Sum_probs=56.5
Q ss_pred CCCeEEEEEeeCCchhhHH-HHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHH
Q 027406 8 KGKKITVLSIDGGGVKGII-PGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINN 86 (223)
Q Consensus 8 ~~~~~~~L~LdGGG~rG~~-~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~ 86 (223)
++-++.+++.+|||.|.+. -.|+|.+|.++...- +. -.+.+..++|+|.|.|+-...-|+... ..+...+.+
T Consensus 45 ~d~P~vaIa~SGGG~RAMl~g~G~Laamder~~~~-~l-~GLLqs~tYlaGlSGstW~vssLa~nn-----~~s~~~l~~ 117 (571)
T KOG1325|consen 45 SDGPVVGIAGSGGGLRAMLSGAGALAAMDERTDNA-GL-GGLLQSATYLAGLSGGSWLVSSLAVNN-----FTSIQLLAD 117 (571)
T ss_pred CCCCeEEEEecCCCHHHHhhhhHHHHHHHhhccCC-cc-cchhhhhhhhcccCCCceeeeeeEECC-----chHhhhhcc
Confidence 3457889999999999985 559999998873221 10 146788999999999998877777542 244555555
Q ss_pred HHHhhCCcccCC
Q 027406 87 FYFEHCPKIFPQ 98 (223)
Q Consensus 87 ~~~~~~~~~f~~ 98 (223)
.+...-..+|..
T Consensus 118 ~~w~~~~~i~~p 129 (571)
T KOG1325|consen 118 NVWNLRHSIFVP 129 (571)
T ss_pred chhhhhcceecc
Confidence 533333334433
No 48
>PF01735 PLA2_B: Lysophospholipase catalytic domain; InterPro: IPR002642 This family consists of lysophospholipase / phospholipase B 3.1.1.5 from EC and cytosolic phospholipase A2 which also has a C2 domain IPR000008 from INTERPRO. Phospholipase B enzymes catalyse the release of fatty acids from lysophsopholipids and are capable in vitro of hydrolyzing all phospholipids extractable from yeast cells []. Cytosolic phospholipase A2 associates with natural membranes in response to physiological increases in Ca2+ and selectively hydrolyses arachidonyl phospholipids [], the aligned region corresponds the carboxy-terminal Ca2+-independent catalytic domain of the protein as discussed in [].; GO: 0004620 phospholipase activity, 0009395 phospholipid catabolic process; PDB: 1CJY_B.
Probab=95.70 E-value=0.015 Score=51.83 Aligned_cols=57 Identities=19% Similarity=0.308 Sum_probs=35.6
Q ss_pred EEEeeCCchhhH-HHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCC
Q 027406 14 VLSIDGGGVKGI-IPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 14 ~L~LdGGG~rG~-~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~ 71 (223)
+|+++|||.|.+ +.+|+|.+|..|-..-. ..-.+.+..++++|.|.|+-....|+..
T Consensus 2 aia~SGGG~RAml~gaG~l~Ald~R~~~~~-~~gGLLq~~tY~sGlSGgsW~~~sl~~~ 59 (491)
T PF01735_consen 2 AIAGSGGGYRAMLAGAGVLSALDSRNPGAN-GTGGLLQCATYISGLSGGSWLVGSLYSN 59 (491)
T ss_dssp EEEE---HHHHHHHHHHHHHHHH---------HCS-GGGECEEEE-HHHHHHHHHH---
T ss_pred eEEecCchHHHHHHHHHHHHHhhhhccccc-cccchhhhhhhhhhcCcchhhhhhhhhc
Confidence 689999999997 78899999985533211 0125788999999999999988777543
No 49
>cd07200 cPLA2_Grp-IVA Group IVA cytosolic phospholipase A2; catalytic domain; Ca-dependent. Group IVA cPLA2, an 85 kDa protein, consists of two domains: the regulatory C2 domain and the alpha/beta hydrolase PLA2 domain. Group IVA cPLA2 is also referred to as cPLA2-alpha. The catalytic domain of cytosolic phospholipase A2 (cPLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms. Movement of the cPLA2 lid possibly exposes a greater hydrophobic surface and the active site. cPLA2 belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile
Probab=95.09 E-value=0.015 Score=51.67 Aligned_cols=53 Identities=21% Similarity=0.185 Sum_probs=43.7
Q ss_pred CCeEEEEEeeCCchhhH-HHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcC
Q 027406 9 GKKITVLSIDGGGVKGI-IPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTA 70 (223)
Q Consensus 9 ~~~~~~L~LdGGG~rG~-~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~ 70 (223)
.-+..+|+++|||-|.+ .-+|+|++|.+. .+.+...+++|.|.|+-....++.
T Consensus 42 ~~P~Iaia~SGGGyRAMl~gaG~l~Ald~g---------GLLq~aTYlaGLSGgsWlvgsl~~ 95 (505)
T cd07200 42 EVPVIALLGSGGGFRAMVGMSGAMKALYDS---------GVLDCATYVAGLSGSTWYMSTLYS 95 (505)
T ss_pred cCCeEEEEecCccHHHHhhccHHHHhhhcC---------ChhhhhhhhhcCCccHHHHHHHHh
Confidence 34678999999999997 677999999772 578899999999999977655553
No 50
>smart00022 PLAc Cytoplasmic phospholipase A2, catalytic subunit. Cytosolic phospholipases A2 hydrolyse arachidonyl phospholipids. Family includes phospholipases B isoforms.
Probab=94.72 E-value=0.034 Score=50.10 Aligned_cols=61 Identities=18% Similarity=0.298 Sum_probs=48.3
Q ss_pred CCeEEEEEeeCCchhhH-HHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCC
Q 027406 9 GKKITVLSIDGGGVKGI-IPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 9 ~~~~~~L~LdGGG~rG~-~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~ 71 (223)
..+...|+++|||-|.+ ..+|+|.++.+|... .|. -.+.+...+++|.|.|+.+...++..
T Consensus 74 ~~P~Igia~SGGGyRAml~gaG~l~ald~R~~~-~~l-gGLLq~~tYlaGlSGgsWlv~sl~~n 135 (549)
T smart00022 74 DVPVIAIAGSGGGFRAMVGGAGVLKAMDNRTDG-HGL-GGLLQSATYLAGLSGGTWLVGTLASN 135 (549)
T ss_pred cCceEEEEecCCCHHHHHhccHHHHHhhhcccc-ccc-ccHhhhhhhhhccchHHHHHHHHhhC
Confidence 34678899999999997 688999999886432 111 14778899999999999998888765
No 51
>cd07203 cPLA2_Fungal_PLB Fungal Phospholipase B-like; cPLA2 GrpIVA homologs; catalytic domain. Fungal phospholipase B are Group IV cPLA2 homologs. Aspergillus PLA2 is Ca-dependent, yet it does not contain a C2 domain. PLB deacylates both sn-1 and sn-2 chains of phospholipids and are abundantly expressed in fungi. It shows lysophospholipase (lysoPL) and transacylase activities. The active site residues from cPLA2 are also conserved in PLB. Like cPLA2, PLB also has a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). It includes PLB1 from Schizosaccharomyces pombe, PLB2 from Candida glabrata, and PLB3 from Saccharomyces cerevisiae. PLB1, PLB2, and PLB3 show PLB and lysoPL activities; PLB3 is specific for phosphoinositides.
Probab=94.57 E-value=0.032 Score=50.04 Aligned_cols=72 Identities=15% Similarity=0.250 Sum_probs=51.6
Q ss_pred CCeEEEEEeeCCchhhH-HHHHHHHHHHHHhhccCCCC-CccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHH
Q 027406 9 GKKITVLSIDGGGVKGI-IPGTILAFLESRLQDLDGPN-ARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDIN 85 (223)
Q Consensus 9 ~~~~~~L~LdGGG~rG~-~~~gvL~~L~~~~~~~~g~~-~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~ 85 (223)
..+...|+++|||-|.+ ..+|+|.++..|...-...+ -.+.+...+++|.|.|+-+...|+... . .+++++.
T Consensus 61 ~~P~Igia~SGGGyRAMl~GaG~l~AlD~Rt~~~~~~glgGLLQsatYlaGLSGGsWlvgSl~~Nn---f--~sv~~l~ 134 (552)
T cd07203 61 NGPRIGIAVSGGGYRAMLTGAGAIAAMDNRTDNATEHGLGGLLQSSTYLSGLSGGSWLVGSLASNN---F--TSVQDLL 134 (552)
T ss_pred cCCeEEEEecCccHHHHHhccHHHHhhhcccccccccccccHHHHhhHhhhcCccchhhhhhhhCC---C--CCHHHHh
Confidence 34678899999999997 67899999987632211000 147788999999999999887777653 1 3455554
No 52
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=77.99 E-value=3.3 Score=32.13 Aligned_cols=18 Identities=33% Similarity=0.595 Sum_probs=16.3
Q ss_pred ceeeeccHHHHHHHHhcC
Q 027406 53 DIVAGTSTGGLIGTMLTA 70 (223)
Q Consensus 53 d~i~GtS~Gai~a~~l~~ 70 (223)
.+++|+|.||..|..|+.
T Consensus 61 ~~liGSSlGG~~A~~La~ 78 (187)
T PF05728_consen 61 VVLIGSSLGGFYATYLAE 78 (187)
T ss_pred eEEEEEChHHHHHHHHHH
Confidence 699999999999999874
No 53
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=77.16 E-value=6.8 Score=32.84 Aligned_cols=33 Identities=18% Similarity=0.113 Sum_probs=24.2
Q ss_pred ccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHH
Q 027406 49 ADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFY 88 (223)
Q Consensus 49 ~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~ 88 (223)
+..+|.++|.|.|-+.|+..+ |. ++.++...+.
T Consensus 82 Gi~P~~v~GhSlGE~aA~~aa-G~------ls~e~a~~lv 114 (318)
T PF00698_consen 82 GIKPDAVIGHSLGEYAALVAA-GA------LSLEDALRLV 114 (318)
T ss_dssp THCESEEEESTTHHHHHHHHT-TS------SSHHHHHHHH
T ss_pred ccccceeeccchhhHHHHHHC-Cc------cchhhhhhhH
Confidence 457899999999988877544 43 6777666554
No 54
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=76.76 E-value=7.8 Score=31.91 Aligned_cols=32 Identities=19% Similarity=0.219 Sum_probs=23.0
Q ss_pred ccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHH
Q 027406 49 ADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNF 87 (223)
Q Consensus 49 ~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~ 87 (223)
+..+|.++|.|.|-+.|+.++ +. ++.++..++
T Consensus 80 Gi~p~~~~GhSlGE~aA~~~a-g~------~~~~~~l~l 111 (298)
T smart00827 80 GVRPDAVVGHSLGEIAAAYVA-GV------LSLEDAARL 111 (298)
T ss_pred CCcccEEEecCHHHHHHHHHh-CC------CCHHHHHHH
Confidence 346899999999998887765 32 565655544
No 55
>PF06361 RTBV_P12: Rice tungro bacilliform virus P12 protein; InterPro: IPR009417 This family consists of several Rice tungro bacilliform virus P12 proteins. The function of this family is unknown [].
Probab=72.89 E-value=1.7 Score=28.64 Aligned_cols=44 Identities=14% Similarity=0.309 Sum_probs=28.6
Q ss_pred chhhHHHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHH
Q 027406 21 GVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTM 67 (223)
Q Consensus 21 G~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~ 67 (223)
..+|+.++..|++|.+.++.+.. .+...+.--...|+|+|+-+.
T Consensus 46 askglvqlyalqeidkkinnl~a---qv~k~pttsgs~sagaivpag 89 (110)
T PF06361_consen 46 ASKGLVQLYALQEIDKKINNLSA---QVSKIPTTSGSSSAGAIVPAG 89 (110)
T ss_pred hhhhHHHHHHHHHHHhhhhhhHh---hhhcCccCCCCCCcceeeecC
Confidence 36899999999999888765332 233333444445677776543
No 56
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=71.87 E-value=12 Score=30.80 Aligned_cols=31 Identities=19% Similarity=0.184 Sum_probs=23.1
Q ss_pred cccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHH
Q 027406 50 DYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNF 87 (223)
Q Consensus 50 ~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~ 87 (223)
..++.++|.|.|-+.|+..+.- ++.++..++
T Consensus 75 ~~P~~v~GhS~GE~aAa~~aG~-------~s~e~a~~l 105 (295)
T TIGR03131 75 PRPSAVAGYSVGEYAAAVVAGV-------LTFDDALRL 105 (295)
T ss_pred CCCcEEeecCHHHHHHHHHhCC-------CCHHHHHHH
Confidence 3689999999999888876543 566665554
No 57
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=71.84 E-value=13 Score=30.51 Aligned_cols=32 Identities=16% Similarity=0.075 Sum_probs=23.4
Q ss_pred cccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHH
Q 027406 50 DYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFY 88 (223)
Q Consensus 50 ~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~ 88 (223)
..+|.++|.|.|-+.|+.++-- ++.++..++.
T Consensus 82 i~p~~v~GhS~GE~aAa~~aG~-------ls~eda~~lv 113 (290)
T TIGR00128 82 LKPDFAAGHSLGEYSALVAAGA-------LDFETALKLV 113 (290)
T ss_pred CCCCEEeecCHHHHHHHHHhCC-------CCHHHHHHHH
Confidence 4689999999999877766533 6666665553
No 58
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=70.63 E-value=11 Score=29.85 Aligned_cols=19 Identities=32% Similarity=0.396 Sum_probs=16.8
Q ss_pred ceeeeccHHHHHHHHhcCC
Q 027406 53 DIVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 53 d~i~GtS~Gai~a~~l~~~ 71 (223)
-.|+|.|+||..|+.++..
T Consensus 117 ~~i~G~S~GG~~Al~~~l~ 135 (251)
T PF00756_consen 117 RAIAGHSMGGYGALYLALR 135 (251)
T ss_dssp EEEEEETHHHHHHHHHHHH
T ss_pred eEEeccCCCcHHHHHHHHh
Confidence 5999999999999988754
No 59
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=70.38 E-value=5.4 Score=32.13 Aligned_cols=15 Identities=20% Similarity=0.127 Sum_probs=12.2
Q ss_pred ceeeeccHHHHHHHH
Q 027406 53 DIVAGTSTGGLIGTM 67 (223)
Q Consensus 53 d~i~GtS~Gai~a~~ 67 (223)
-.++|+||||+++.-
T Consensus 114 ~~~~G~SAGAii~~~ 128 (233)
T PRK05282 114 TPYIGWSAGANVAGP 128 (233)
T ss_pred CEEEEECHHHHhhhc
Confidence 368999999998654
No 60
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=69.94 E-value=7.3 Score=33.53 Aligned_cols=18 Identities=28% Similarity=0.363 Sum_probs=15.9
Q ss_pred eeeeccHHHHHHHHhcCC
Q 027406 54 IVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (223)
.++|.|.||.++..++..
T Consensus 150 ~lvG~S~Gg~ia~~~a~~ 167 (379)
T PRK00175 150 AVVGGSMGGMQALEWAID 167 (379)
T ss_pred EEEEECHHHHHHHHHHHh
Confidence 799999999999888754
No 61
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=68.04 E-value=5.3 Score=29.70 Aligned_cols=13 Identities=38% Similarity=0.690 Sum_probs=11.2
Q ss_pred ceeeeccHHHHHH
Q 027406 53 DIVAGTSTGGLIG 65 (223)
Q Consensus 53 d~i~GtS~Gai~a 65 (223)
-+++|+||||++.
T Consensus 70 ~vi~G~SAGA~i~ 82 (154)
T PF03575_consen 70 GVIIGTSAGAMIL 82 (154)
T ss_dssp SEEEEETHHHHCT
T ss_pred CEEEEEChHHhhc
Confidence 4899999999884
No 62
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=66.52 E-value=20 Score=30.18 Aligned_cols=50 Identities=16% Similarity=0.115 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHHHh
Q 027406 25 IIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFE 90 (223)
Q Consensus 25 ~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~ 90 (223)
+.++.+++.++++. ....+|+++|+|-|-+.|+..+-- ++.++..++...
T Consensus 68 ~~s~a~~~~l~~~~---------~~~~p~~~aGHSlGEysAl~~ag~-------~~~ed~~~Lv~~ 117 (310)
T COG0331 68 LVSLAAYRVLAEQG---------LGVKPDFVAGHSLGEYSALAAAGV-------LSFEDALKLVRK 117 (310)
T ss_pred HHHHHHHHHHHHhc---------CCCCCceeecccHhHHHHHHHccc-------ccHHHHHHHHHH
Confidence 45666777777752 256789999999998888776542 566666665543
No 63
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=60.73 E-value=6.5 Score=28.20 Aligned_cols=17 Identities=29% Similarity=0.694 Sum_probs=14.9
Q ss_pred eeeeccHHHHHHHHhcC
Q 027406 54 IVAGTSTGGLIGTMLTA 70 (223)
Q Consensus 54 ~i~GtS~Gai~a~~l~~ 70 (223)
+++|.|.||.+|.+++.
T Consensus 67 ~itGHSLGGalA~l~a~ 83 (140)
T PF01764_consen 67 VITGHSLGGALASLAAA 83 (140)
T ss_dssp EEEEETHHHHHHHHHHH
T ss_pred hhhccchHHHHHHHHHH
Confidence 57899999999998873
No 64
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=58.86 E-value=35 Score=28.92 Aligned_cols=33 Identities=21% Similarity=0.220 Sum_probs=23.3
Q ss_pred cccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHHH
Q 027406 50 DYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYF 89 (223)
Q Consensus 50 ~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~ 89 (223)
..+|.++|.|.|-+.|+..+ |. ++.++..++..
T Consensus 123 ~~~~~~~GHSlGE~aA~~~A-G~------ls~e~al~lv~ 155 (343)
T PLN02752 123 DSVDVCAGLSLGEYTALVFA-GA------LSFEDGLKLVK 155 (343)
T ss_pred cCCCeeeeccHHHHHHHHHh-CC------CCHHHHHHHHH
Confidence 35688999999998887766 32 56666555543
No 65
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=56.38 E-value=13 Score=29.10 Aligned_cols=20 Identities=40% Similarity=0.511 Sum_probs=16.7
Q ss_pred ccceeeeccHHHHHHHHhcC
Q 027406 51 YFDIVAGTSTGGLIGTMLTA 70 (223)
Q Consensus 51 ~fd~i~GtS~Gai~a~~l~~ 70 (223)
.||-|.|-|-||.+|++|+.
T Consensus 102 PfdGvlGFSQGA~lAa~ll~ 121 (212)
T PF03959_consen 102 PFDGVLGFSQGAALAALLLA 121 (212)
T ss_dssp --SEEEEETHHHHHHHHHHH
T ss_pred CeEEEEeecHHHHHHHHHHH
Confidence 39999999999999998874
No 66
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=55.39 E-value=13 Score=29.61 Aligned_cols=33 Identities=27% Similarity=0.500 Sum_probs=26.1
Q ss_pred HHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcC
Q 027406 30 ILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTA 70 (223)
Q Consensus 30 vL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~ 70 (223)
.|++|++.+.+ .-.||-|.|-|=||.++++++.
T Consensus 91 sl~yl~~~i~e--------nGPFDGllGFSQGA~laa~l~~ 123 (230)
T KOG2551|consen 91 SLEYLEDYIKE--------NGPFDGLLGFSQGAALAALLAG 123 (230)
T ss_pred HHHHHHHHHHH--------hCCCccccccchhHHHHHHhhc
Confidence 46667766643 2359999999999999999986
No 67
>PRK04940 hypothetical protein; Provisional
Probab=54.52 E-value=20 Score=27.62 Aligned_cols=19 Identities=16% Similarity=0.312 Sum_probs=16.7
Q ss_pred cceeeeccHHHHHHHHhcC
Q 027406 52 FDIVAGTSTGGLIGTMLTA 70 (223)
Q Consensus 52 fd~i~GtS~Gai~a~~l~~ 70 (223)
...++|+|.||.-|..|+.
T Consensus 61 ~~~liGSSLGGyyA~~La~ 79 (180)
T PRK04940 61 RPLICGVGLGGYWAERIGF 79 (180)
T ss_pred CcEEEEeChHHHHHHHHHH
Confidence 4799999999999998874
No 68
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=54.06 E-value=9.3 Score=29.44 Aligned_cols=17 Identities=29% Similarity=0.565 Sum_probs=15.0
Q ss_pred eeeeccHHHHHHHHhcC
Q 027406 54 IVAGTSTGGLIGTMLTA 70 (223)
Q Consensus 54 ~i~GtS~Gai~a~~l~~ 70 (223)
.++|.|+||-+++.++.
T Consensus 74 ~l~G~SAGg~la~~~~~ 90 (211)
T PF07859_consen 74 VLIGDSAGGHLALSLAL 90 (211)
T ss_dssp EEEEETHHHHHHHHHHH
T ss_pred EEeecccccchhhhhhh
Confidence 57899999999999884
No 69
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=53.27 E-value=25 Score=29.77 Aligned_cols=19 Identities=26% Similarity=0.338 Sum_probs=16.2
Q ss_pred ceeeeccHHHHHHHHhcCC
Q 027406 53 DIVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 53 d~i~GtS~Gai~a~~l~~~ 71 (223)
-.++|.|.||+++..++..
T Consensus 129 ~~l~G~S~Gg~ia~~~a~~ 147 (351)
T TIGR01392 129 AAVVGGSMGGMQALEWAID 147 (351)
T ss_pred eEEEEECHHHHHHHHHHHH
Confidence 4689999999999988754
No 70
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=50.72 E-value=21 Score=29.00 Aligned_cols=14 Identities=36% Similarity=0.510 Sum_probs=12.0
Q ss_pred ceeeeccHHHHHHH
Q 027406 53 DIVAGTSTGGLIGT 66 (223)
Q Consensus 53 d~i~GtS~Gai~a~ 66 (223)
-+++|+||||++..
T Consensus 117 ~vi~G~SAGA~i~~ 130 (250)
T TIGR02069 117 IILGGTSAGAAVMS 130 (250)
T ss_pred CeEEEccHHHHhcc
Confidence 48999999999874
No 71
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=46.06 E-value=16 Score=26.84 Aligned_cols=17 Identities=29% Similarity=0.442 Sum_probs=14.9
Q ss_pred eeeeccHHHHHHHHhcC
Q 027406 54 IVAGTSTGGLIGTMLTA 70 (223)
Q Consensus 54 ~i~GtS~Gai~a~~l~~ 70 (223)
+++|.|.||-+|.+++.
T Consensus 31 ~v~GHSlGg~lA~l~a~ 47 (153)
T cd00741 31 HVTGHSLGGALAGLAGL 47 (153)
T ss_pred EEEEcCHHHHHHHHHHH
Confidence 68999999999988773
No 72
>PF08250 Sperm_act_pep: Sperm-activating peptides; InterPro: IPR013254 The sperm-activating peptides (SAPs) are isolated in egg-conditioned media (egg jelly) of sea urchins. SAPs have several effects on sea urchin spermatozoa: stimulate sperm respiration and motility through intracellular alkalinization, transient elevation of cAMP, cGMP and Ca2+ levels in sperm cells [, ].
Probab=45.90 E-value=7.8 Score=14.99 Aligned_cols=7 Identities=71% Similarity=1.346 Sum_probs=5.0
Q ss_pred EeeCCch
Q 027406 16 SIDGGGV 22 (223)
Q Consensus 16 ~LdGGG~ 22 (223)
.|.|||+
T Consensus 3 ~l~GgGV 9 (10)
T PF08250_consen 3 SLGGGGV 9 (10)
T ss_pred ccccCcC
Confidence 5778875
No 73
>COG1647 Esterase/lipase [General function prediction only]
Probab=42.32 E-value=13 Score=29.82 Aligned_cols=18 Identities=33% Similarity=0.458 Sum_probs=16.1
Q ss_pred eeeeccHHHHHHHHhcCC
Q 027406 54 IVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (223)
.|+|.|.||+.++-|+..
T Consensus 88 ~v~GlSmGGv~alkla~~ 105 (243)
T COG1647 88 AVVGLSMGGVFALKLAYH 105 (243)
T ss_pred EEEeecchhHHHHHHHhh
Confidence 578999999999999865
No 74
>PRK11071 esterase YqiA; Provisional
Probab=42.08 E-value=81 Score=24.13 Aligned_cols=19 Identities=32% Similarity=0.336 Sum_probs=16.5
Q ss_pred ceeeeccHHHHHHHHhcCC
Q 027406 53 DIVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 53 d~i~GtS~Gai~a~~l~~~ 71 (223)
-.++|.|.||.+++.++..
T Consensus 63 ~~lvG~S~Gg~~a~~~a~~ 81 (190)
T PRK11071 63 LGLVGSSLGGYYATWLSQC 81 (190)
T ss_pred eEEEEECHHHHHHHHHHHH
Confidence 4889999999999988854
No 75
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=41.06 E-value=17 Score=28.43 Aligned_cols=15 Identities=27% Similarity=0.439 Sum_probs=13.1
Q ss_pred eeeeccHHHHHHHHh
Q 027406 54 IVAGTSTGGLIGTML 68 (223)
Q Consensus 54 ~i~GtS~Gai~a~~l 68 (223)
.++|+|+||++..-.
T Consensus 116 v~~G~SAGA~~~~~~ 130 (210)
T cd03129 116 VIGGTSAGAAVMGET 130 (210)
T ss_pred eEEEcCHHHHHhhhc
Confidence 899999999998764
No 76
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=40.79 E-value=19 Score=28.36 Aligned_cols=17 Identities=41% Similarity=0.749 Sum_probs=15.1
Q ss_pred eeeeccHHHHHHHHhcC
Q 027406 54 IVAGTSTGGLIGTMLTA 70 (223)
Q Consensus 54 ~i~GtS~Gai~a~~l~~ 70 (223)
+++|.|.||-+|.+++.
T Consensus 131 ~vtGHSLGGaiA~l~a~ 147 (229)
T cd00519 131 IVTGHSLGGALASLLAL 147 (229)
T ss_pred EEEccCHHHHHHHHHHH
Confidence 68999999999988874
No 77
>PLN02408 phospholipase A1
Probab=40.15 E-value=40 Score=29.10 Aligned_cols=17 Identities=24% Similarity=0.431 Sum_probs=15.0
Q ss_pred eeeeccHHHHHHHHhcC
Q 027406 54 IVAGTSTGGLIGTMLTA 70 (223)
Q Consensus 54 ~i~GtS~Gai~a~~l~~ 70 (223)
.|+|.|.||-+|.+.+.
T Consensus 203 ~vTGHSLGGALAtLaA~ 219 (365)
T PLN02408 203 TITGHSLGAALATLTAY 219 (365)
T ss_pred EEeccchHHHHHHHHHH
Confidence 68999999999998773
No 78
>COG3150 Predicted esterase [General function prediction only]
Probab=40.13 E-value=41 Score=25.81 Aligned_cols=35 Identities=34% Similarity=0.442 Sum_probs=23.7
Q ss_pred HHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcC
Q 027406 29 TILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTA 70 (223)
Q Consensus 29 gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~ 70 (223)
-.++.||+.+.+. .+.--.|||+|-|+.-|.-|+.
T Consensus 44 ~a~~ele~~i~~~-------~~~~p~ivGssLGGY~At~l~~ 78 (191)
T COG3150 44 QALKELEKAVQEL-------GDESPLIVGSSLGGYYATWLGF 78 (191)
T ss_pred HHHHHHHHHHHHc-------CCCCceEEeecchHHHHHHHHH
Confidence 3456666655432 2233789999999999987763
No 79
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=39.27 E-value=45 Score=29.03 Aligned_cols=21 Identities=24% Similarity=0.355 Sum_probs=18.1
Q ss_pred ccceeeeccHHHHHHHHhcCC
Q 027406 51 YFDIVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 51 ~fd~i~GtS~Gai~a~~l~~~ 71 (223)
.+.+++|.|.||.++..++..
T Consensus 161 ~~~~vvG~SmGG~ial~~a~~ 181 (389)
T PRK06765 161 RLHAVMGPSMGGMQAQEWAVH 181 (389)
T ss_pred CceEEEEECHHHHHHHHHHHH
Confidence 467899999999999988864
No 80
>PLN02571 triacylglycerol lipase
Probab=38.22 E-value=45 Score=29.30 Aligned_cols=17 Identities=24% Similarity=0.440 Sum_probs=14.9
Q ss_pred eeeeccHHHHHHHHhcC
Q 027406 54 IVAGTSTGGLIGTMLTA 70 (223)
Q Consensus 54 ~i~GtS~Gai~a~~l~~ 70 (223)
.|+|.|.||-+|++.+.
T Consensus 229 ~VTGHSLGGALAtLaA~ 245 (413)
T PLN02571 229 TICGHSLGAALATLNAV 245 (413)
T ss_pred EEeccchHHHHHHHHHH
Confidence 79999999999988763
No 81
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=37.71 E-value=51 Score=27.47 Aligned_cols=38 Identities=21% Similarity=0.191 Sum_probs=25.0
Q ss_pred HHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCC
Q 027406 28 GTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 28 ~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~ 71 (223)
...|+++.+.+.. +-....=++.|.|+||++++.++..
T Consensus 90 ~~dl~~~~~~~~~------~~~~~p~~l~gHSmGg~Ia~~~~~~ 127 (298)
T COG2267 90 VDDLDAFVETIAE------PDPGLPVFLLGHSMGGLIALLYLAR 127 (298)
T ss_pred HHHHHHHHHHHhc------cCCCCCeEEEEeCcHHHHHHHHHHh
Confidence 4555555554432 1123456899999999999988765
No 82
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=37.65 E-value=61 Score=27.43 Aligned_cols=19 Identities=26% Similarity=0.352 Sum_probs=16.4
Q ss_pred ceeeeccHHHHHHHHhcCC
Q 027406 53 DIVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 53 d~i~GtS~Gai~a~~l~~~ 71 (223)
=.++|.|.|+++|..+|..
T Consensus 130 ~~lvghS~Gg~va~~~Aa~ 148 (326)
T KOG1454|consen 130 VSLVGHSLGGIVALKAAAY 148 (326)
T ss_pred eEEEEeCcHHHHHHHHHHh
Confidence 3588999999999998865
No 83
>PF07812 TfuA: TfuA-like protein; InterPro: IPR012924 This domain consists of a group of sequences that are similar to the core of TfuA protein (Q52872 from SWISSPROT). This protein is involved in the production of trifolitoxin (TFX), a gene-encoded, post-translationally modified peptide antibiotic []. The role of TfuA in TFX synthesis is unknown, and it may be involved in other cellular processes [].
Probab=37.44 E-value=60 Score=23.25 Aligned_cols=48 Identities=19% Similarity=0.198 Sum_probs=33.4
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHHHh
Q 027406 24 GIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFE 90 (223)
Q Consensus 24 G~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~ 90 (223)
.++|--+|.+|.+ -+.++.+.|+||+=|+=+....- .-+-++.+.|.+
T Consensus 9 aV~HkEIL~Al~~--------------Gv~V~GasSMGALRAaEl~~fGM-----~GvG~If~~Yr~ 56 (120)
T PF07812_consen 9 AVWHKEILWALSQ--------------GVRVFGASSMGALRAAELAPFGM-----IGVGRIFEWYRD 56 (120)
T ss_pred CccHHHHHHHHHC--------------CCEEEecccHHHHHHHHhHhcCC-----EeehHHHHHHhc
Confidence 3556667766654 36799999999999997764321 345677777765
No 84
>PRK06489 hypothetical protein; Provisional
Probab=37.37 E-value=24 Score=29.99 Aligned_cols=21 Identities=29% Similarity=0.439 Sum_probs=17.3
Q ss_pred ccceeeeccHHHHHHHHhcCC
Q 027406 51 YFDIVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 51 ~fd~i~GtS~Gai~a~~l~~~ 71 (223)
.+.+++|.|.||.+|..++..
T Consensus 154 ~~~~lvG~SmGG~vAl~~A~~ 174 (360)
T PRK06489 154 HLRLILGTSMGGMHAWMWGEK 174 (360)
T ss_pred ceeEEEEECHHHHHHHHHHHh
Confidence 345689999999999988764
No 85
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=36.47 E-value=27 Score=27.80 Aligned_cols=44 Identities=18% Similarity=0.351 Sum_probs=26.6
Q ss_pred EEEEEeeCCchhhHH----HHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHH
Q 027406 12 ITVLSIDGGGVKGII----PGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGT 66 (223)
Q Consensus 12 ~~~L~LdGGG~rG~~----~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~ 66 (223)
.-++...||-.+-+. +-|.++-|.++.+. | -..+|.||||+++.
T Consensus 85 ~d~IyVgGGNTF~LL~~lke~gld~iIr~~vk~--G---------~~YiG~SAGA~ia~ 132 (224)
T COG3340 85 ADIIYVGGGNTFNLLQELKETGLDDIIRERVKA--G---------TPYIGWSAGANIAG 132 (224)
T ss_pred ccEEEECCchHHHHHHHHHHhCcHHHHHHHHHc--C---------CceEEeccCceeec
Confidence 446677777665442 33444445554432 1 36789999999874
No 86
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=35.86 E-value=45 Score=29.70 Aligned_cols=44 Identities=18% Similarity=0.390 Sum_probs=32.4
Q ss_pred chhhHH-HHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhc
Q 027406 21 GVKGII-PGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLT 69 (223)
Q Consensus 21 G~rG~~-~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~ 69 (223)
|..|+. +..+|+-+.+.+....|+.-++ .|.|.|+||..+.++.
T Consensus 182 gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~V-----Tl~G~SAGa~sv~~~l 226 (535)
T PF00135_consen 182 GNYGLLDQRLALKWVQDNIAAFGGDPDNV-----TLFGQSAGAASVSLLL 226 (535)
T ss_dssp STHHHHHHHHHHHHHHHHGGGGTEEEEEE-----EEEEETHHHHHHHHHH
T ss_pred hhhhhhhhHHHHHHHHhhhhhcccCCcce-----eeeeecccccccceee
Confidence 677875 7788999999998776642221 4679999998886543
No 87
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=35.39 E-value=25 Score=26.84 Aligned_cols=18 Identities=28% Similarity=0.416 Sum_probs=15.1
Q ss_pred eeeeccHHHHHHHHhcCC
Q 027406 54 IVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (223)
.+.|.|.||.++..++..
T Consensus 73 ~l~G~S~Gg~ia~~~a~~ 90 (251)
T TIGR03695 73 FLVGYSMGGRIALYYALQ 90 (251)
T ss_pred EEEEeccHHHHHHHHHHh
Confidence 467999999999988754
No 88
>cd03145 GAT1_cyanophycinase Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. This group contains proteins similar to the extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Cyanophycinase is believed to be a serine-type exopeptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow.
Probab=35.15 E-value=23 Score=27.99 Aligned_cols=45 Identities=22% Similarity=0.320 Sum_probs=25.8
Q ss_pred EEEEEeeCCchhhHHH----HHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHH
Q 027406 12 ITVLSIDGGGVKGIIP----GTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTM 67 (223)
Q Consensus 12 ~~~L~LdGGG~rG~~~----~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~ 67 (223)
..++.+.||-..=+.+ -++++.|.+.+++ | -.++|+|+||++..-
T Consensus 84 ad~I~~~GG~~~~~~~~l~~t~l~~~l~~~~~~--G---------~v~~G~SAGA~i~~~ 132 (217)
T cd03145 84 ADGIFFTGGDQLRITSALGGTPLLDALRKVYRG--G---------VVIGGTSAGAAVMSD 132 (217)
T ss_pred CCEEEEeCCcHHHHHHHHcCChHHHHHHHHHHc--C---------CEEEEccHHHHhhhh
Confidence 3456677766432222 2344445444321 1 379999999999764
No 89
>PRK10673 acyl-CoA esterase; Provisional
Probab=34.80 E-value=27 Score=27.42 Aligned_cols=18 Identities=39% Similarity=0.351 Sum_probs=15.4
Q ss_pred eeeeccHHHHHHHHhcCC
Q 027406 54 IVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (223)
.++|.|.||.++..++..
T Consensus 84 ~lvGhS~Gg~va~~~a~~ 101 (255)
T PRK10673 84 TFIGHSMGGKAVMALTAL 101 (255)
T ss_pred EEEEECHHHHHHHHHHHh
Confidence 577999999999988754
No 90
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=34.15 E-value=46 Score=27.37 Aligned_cols=50 Identities=24% Similarity=0.284 Sum_probs=27.8
Q ss_pred EEeeCCchhhHHHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhc
Q 027406 15 LSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLT 69 (223)
Q Consensus 15 L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~ 69 (223)
.-..|||.-...+ -|++++....-...++...-..|.|.|.||++++...
T Consensus 106 ~~~~gGg~~~f~~-----fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aL 155 (264)
T COG2819 106 FYQFGGGGDAFRE-----FLTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFAL 155 (264)
T ss_pred CCCCCCChHHHHH-----HHHHhhHHHHhcccccCcccceeeeecchhHHHHHHH
Confidence 4566788655433 2333332211111233333378999999999997644
No 91
>PLN02324 triacylglycerol lipase
Probab=33.97 E-value=74 Score=28.00 Aligned_cols=16 Identities=19% Similarity=0.426 Sum_probs=14.2
Q ss_pred eeeeccHHHHHHHHhc
Q 027406 54 IVAGTSTGGLIGTMLT 69 (223)
Q Consensus 54 ~i~GtS~Gai~a~~l~ 69 (223)
.|+|.|.||-+|++.+
T Consensus 218 tvTGHSLGGALAtLaA 233 (415)
T PLN02324 218 TFTGHSLGAVMSVLSA 233 (415)
T ss_pred EEecCcHHHHHHHHHH
Confidence 5789999999998876
No 92
>PHA02857 monoglyceride lipase; Provisional
Probab=33.79 E-value=27 Score=28.04 Aligned_cols=18 Identities=22% Similarity=0.344 Sum_probs=15.3
Q ss_pred eeeeccHHHHHHHHhcCC
Q 027406 54 IVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (223)
.++|.|.||.+|..++..
T Consensus 100 ~lvG~S~GG~ia~~~a~~ 117 (276)
T PHA02857 100 FLLGHSMGATISILAAYK 117 (276)
T ss_pred EEEEcCchHHHHHHHHHh
Confidence 478999999999888754
No 93
>PLN02802 triacylglycerol lipase
Probab=33.43 E-value=57 Score=29.46 Aligned_cols=16 Identities=25% Similarity=0.495 Sum_probs=14.4
Q ss_pred eeeeccHHHHHHHHhc
Q 027406 54 IVAGTSTGGLIGTMLT 69 (223)
Q Consensus 54 ~i~GtS~Gai~a~~l~ 69 (223)
+|+|.|.||-+|.+.+
T Consensus 333 ~VTGHSLGGALAtLaA 348 (509)
T PLN02802 333 TVTGHSLGAALALLVA 348 (509)
T ss_pred EEeccchHHHHHHHHH
Confidence 6899999999998876
No 94
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=33.29 E-value=62 Score=28.75 Aligned_cols=39 Identities=18% Similarity=0.313 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcC
Q 027406 27 PGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTA 70 (223)
Q Consensus 27 ~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~ 70 (223)
+..+|+.+.+.+....|+.-+ =.|.|.|+||..+..+..
T Consensus 157 ~~~al~wv~~~i~~fggd~~~-----v~~~G~SaG~~~~~~~~~ 195 (493)
T cd00312 157 QRLALKWVQDNIAAFGGDPDS-----VTIFGESAGGASVSLLLL 195 (493)
T ss_pred HHHHHHHHHHHHHHhCCCcce-----EEEEeecHHHHHhhhHhh
Confidence 445666666766554443222 257899999998876654
No 95
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=33.18 E-value=63 Score=25.01 Aligned_cols=18 Identities=28% Similarity=0.414 Sum_probs=16.0
Q ss_pred cceeeeccHHHHHHHHhc
Q 027406 52 FDIVAGTSTGGLIGTMLT 69 (223)
Q Consensus 52 fd~i~GtS~Gai~a~~l~ 69 (223)
+=.++|.|.||++|.-++
T Consensus 67 p~~L~G~S~Gg~lA~E~A 84 (229)
T PF00975_consen 67 PYVLAGWSFGGILAFEMA 84 (229)
T ss_dssp SEEEEEETHHHHHHHHHH
T ss_pred CeeehccCccHHHHHHHH
Confidence 568999999999998877
No 96
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=32.98 E-value=33 Score=24.17 Aligned_cols=17 Identities=47% Similarity=0.683 Sum_probs=14.9
Q ss_pred eeeeccHHHHHHHHhcC
Q 027406 54 IVAGTSTGGLIGTMLTA 70 (223)
Q Consensus 54 ~i~GtS~Gai~a~~l~~ 70 (223)
++.|.|.||.++..++.
T Consensus 64 ~l~G~S~Gg~~a~~~~~ 80 (145)
T PF12695_consen 64 ILIGHSMGGAIAANLAA 80 (145)
T ss_dssp EEEEETHHHHHHHHHHH
T ss_pred EEEEEccCcHHHHHHhh
Confidence 67899999999988774
No 97
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=32.96 E-value=80 Score=23.48 Aligned_cols=19 Identities=42% Similarity=0.606 Sum_probs=16.0
Q ss_pred ceeeeccHHHHHHHHhcCC
Q 027406 53 DIVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 53 d~i~GtS~Gai~a~~l~~~ 71 (223)
-.++|.|.||.++..++..
T Consensus 68 ~~lvG~S~Gg~~a~~~a~~ 86 (228)
T PF12697_consen 68 VILVGHSMGGMIALRLAAR 86 (228)
T ss_dssp EEEEEETHHHHHHHHHHHH
T ss_pred ccccccccccccccccccc
Confidence 3688999999999988753
No 98
>cd02252 nylC_like nylC-like family; composed of proteins with similarity to Flavobacterium endo-type 6-aminohexanoate-oligomer hydrolase (EIII), the product of the nylon oligomer degradation gene, nylC. EIII is an amide hydrolase that catalyzes the degradation of highly-polymerized 6-aminohexanoate oligomers. Together with other nylon degradation enzymes, such as 6-aminohexanoate cyclic dimer hydrolase (EI) and 6-aminohexanoate dimer hydrolase (EII), EIII plays a role in the detoxification and biological removal of the synthetic by-products of nylon manufacture. EIII shows sequence similarity to L-aminopeptidase D-amidase/D-esterase (DmpA), an aminopeptidase that releases N-terminal D and L amino acids from peptide substrates. Like DmpA, EIII undergoes autocatalytic cleavage in front of a nucleophile to form a heterodimer. DmpA shows similarity in catalytic mechanism to N-terminal nucleophile (Ntn) hydrolases, which are enzymes that catalyze the cleavage of amide bonds through the nucl
Probab=32.85 E-value=69 Score=26.29 Aligned_cols=34 Identities=21% Similarity=0.338 Sum_probs=28.7
Q ss_pred CCCCCCCeEEEEEeeCCchhh-HHHHHHHHHHHHH
Q 027406 4 RTIAKGKKITVLSIDGGGVKG-IIPGTILAFLESR 37 (223)
Q Consensus 4 ~~~~~~~~~~~L~LdGGG~rG-~~~~gvL~~L~~~ 37 (223)
+|...-+.+..++|.||-+-| ...-+|++.|+|+
T Consensus 50 ~p~~~v~~v~aIvLtggsa~GL~aa~gv~~~l~e~ 84 (260)
T cd02252 50 DPENLVQKVHAIVLSGGSAFGLAAADGVMRALEER 84 (260)
T ss_pred CcccccccccEEEEeCCchhhHHHHHHHHHHHHHh
Confidence 355666778899999999999 5788999999886
No 99
>PF12611 DUF3766: Protein of unknown function (DUF3766); InterPro: IPR013367 Proteins in this entry are encoded in a subset of bacterial flagellar operons, generally between genes designated flgD and flgE, in species as diverse as Bacillus halodurans and various other Firmicutes, Geobacter sulfurreducens, and Bdellovibrio bacteriovorus. The specific molecular function of this protein is unknown.
Probab=32.44 E-value=28 Score=17.36 Aligned_cols=19 Identities=21% Similarity=0.520 Sum_probs=15.7
Q ss_pred EEEeeeCCCCcceeecCCC
Q 027406 147 IIPTFDIKRLQPVIFSSND 165 (223)
Q Consensus 147 ~v~a~d~~~~~~~~f~~~~ 165 (223)
+|++.|-...+-.+|+|-+
T Consensus 2 VITamd~~~~k~nvFTNID 20 (24)
T PF12611_consen 2 VITAMDKEEMKENVFTNID 20 (24)
T ss_pred EEEEEChhHhhcCceeccc
Confidence 5788888888888998854
No 100
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=32.42 E-value=32 Score=26.85 Aligned_cols=19 Identities=26% Similarity=0.326 Sum_probs=16.3
Q ss_pred ceeeeccHHHHHHHHhcCC
Q 027406 53 DIVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 53 d~i~GtS~Gai~a~~l~~~ 71 (223)
=.++|.|.||.+|..++..
T Consensus 68 ~~lvG~S~Gg~va~~~a~~ 86 (242)
T PRK11126 68 YWLVGYSLGGRIAMYYACQ 86 (242)
T ss_pred eEEEEECHHHHHHHHHHHh
Confidence 4678999999999998765
No 101
>PRK07581 hypothetical protein; Validated
Probab=31.64 E-value=33 Score=28.75 Aligned_cols=19 Identities=21% Similarity=0.162 Sum_probs=16.4
Q ss_pred ceeeeccHHHHHHHHhcCC
Q 027406 53 DIVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 53 d~i~GtS~Gai~a~~l~~~ 71 (223)
-.++|.|.||.+|..++..
T Consensus 126 ~~lvG~S~GG~va~~~a~~ 144 (339)
T PRK07581 126 ALVVGWSMGAQQTYHWAVR 144 (339)
T ss_pred EEEEEeCHHHHHHHHHHHH
Confidence 4579999999999998865
No 102
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=31.55 E-value=32 Score=27.14 Aligned_cols=18 Identities=22% Similarity=0.390 Sum_probs=15.4
Q ss_pred eeeeccHHHHHHHHhcCC
Q 027406 54 IVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (223)
.++|.|.||.++..++..
T Consensus 99 ~liG~S~Gg~ia~~~a~~ 116 (288)
T TIGR01250 99 YLLGHSWGGMLAQEYALK 116 (288)
T ss_pred EEEEeehHHHHHHHHHHh
Confidence 677999999999987754
No 103
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=31.50 E-value=65 Score=25.45 Aligned_cols=18 Identities=33% Similarity=0.322 Sum_probs=15.7
Q ss_pred eeeeccHHHHHHHHhcCC
Q 027406 54 IVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (223)
.++|.|.||.+++.++..
T Consensus 98 ~lvG~S~Gg~~a~~~a~~ 115 (278)
T TIGR03056 98 GVIGHSAGAAIALRLALD 115 (278)
T ss_pred eEEEECccHHHHHHHHHh
Confidence 788999999999988754
No 104
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=31.16 E-value=33 Score=28.90 Aligned_cols=18 Identities=28% Similarity=0.477 Sum_probs=15.9
Q ss_pred eeeeccHHHHHHHHhcCC
Q 027406 54 IVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (223)
.++|.|.||.+|..++..
T Consensus 141 ~lvG~SmGG~vA~~~A~~ 158 (343)
T PRK08775 141 AFVGYSYGALVGLQFASR 158 (343)
T ss_pred EEEEECHHHHHHHHHHHH
Confidence 589999999999988764
No 105
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=31.01 E-value=36 Score=26.29 Aligned_cols=17 Identities=24% Similarity=0.442 Sum_probs=15.0
Q ss_pred eeeeccHHHHHHHHhcC
Q 027406 54 IVAGTSTGGLIGTMLTA 70 (223)
Q Consensus 54 ~i~GtS~Gai~a~~l~~ 70 (223)
.|.|.|.||.++++++.
T Consensus 67 ~i~G~S~GG~~a~~~~~ 83 (213)
T PF00326_consen 67 GIMGHSYGGYLALLAAT 83 (213)
T ss_dssp EEEEETHHHHHHHHHHH
T ss_pred EEEcccccccccchhhc
Confidence 67899999999998775
No 106
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=30.80 E-value=33 Score=27.33 Aligned_cols=18 Identities=33% Similarity=0.532 Sum_probs=14.5
Q ss_pred ceeeeccHHHHHHHHhcC
Q 027406 53 DIVAGTSTGGLIGTMLTA 70 (223)
Q Consensus 53 d~i~GtS~Gai~a~~l~~ 70 (223)
=+++|.|+||++|-.+..
T Consensus 87 vilVgHSmGGlvar~~l~ 104 (225)
T PF07819_consen 87 VILVGHSMGGLVARSALS 104 (225)
T ss_pred eEEEEEchhhHHHHHHHh
Confidence 468899999999976553
No 107
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=30.79 E-value=35 Score=27.50 Aligned_cols=18 Identities=22% Similarity=0.320 Sum_probs=15.3
Q ss_pred eeeeccHHHHHHHHhcCC
Q 027406 54 IVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (223)
.++|.|.||.+|+.++..
T Consensus 94 ~LvG~S~GG~va~~~a~~ 111 (276)
T TIGR02240 94 NAIGVSWGGALAQQFAHD 111 (276)
T ss_pred EEEEECHHHHHHHHHHHH
Confidence 366999999999998864
No 108
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=30.73 E-value=1.1e+02 Score=33.70 Aligned_cols=21 Identities=29% Similarity=0.211 Sum_probs=17.2
Q ss_pred ccccceeeeccHHHHHHHHhc
Q 027406 49 ADYFDIVAGTSTGGLIGTMLT 69 (223)
Q Consensus 49 ~~~fd~i~GtS~Gai~a~~l~ 69 (223)
+..+|+++|.|.|-+.|+..+
T Consensus 672 Gi~Pd~v~GHSlGE~aAa~aA 692 (2582)
T TIGR02813 672 GFKADMTAGHSFGELSALCAA 692 (2582)
T ss_pred CCccceeecCCHHHHHHHHHh
Confidence 456899999999998887754
No 109
>PLN02454 triacylglycerol lipase
Probab=29.67 E-value=1.1e+02 Score=26.87 Aligned_cols=16 Identities=25% Similarity=0.536 Sum_probs=14.3
Q ss_pred eeeeccHHHHHHHHhc
Q 027406 54 IVAGTSTGGLIGTMLT 69 (223)
Q Consensus 54 ~i~GtS~Gai~a~~l~ 69 (223)
.++|.|.||-+|++.+
T Consensus 231 ~vTGHSLGGALAtLaA 246 (414)
T PLN02454 231 VLTGHSLGASLATLAA 246 (414)
T ss_pred EEEecCHHHHHHHHHH
Confidence 4899999999998877
No 110
>PRK10162 acetyl esterase; Provisional
Probab=29.13 E-value=38 Score=28.36 Aligned_cols=17 Identities=24% Similarity=0.313 Sum_probs=15.1
Q ss_pred eeeeccHHHHHHHHhcC
Q 027406 54 IVAGTSTGGLIGTMLTA 70 (223)
Q Consensus 54 ~i~GtS~Gai~a~~l~~ 70 (223)
.|+|.|+||.+++.++.
T Consensus 157 ~l~G~SaGG~la~~~a~ 173 (318)
T PRK10162 157 GFAGDSAGAMLALASAL 173 (318)
T ss_pred EEEEECHHHHHHHHHHH
Confidence 78899999999988774
No 111
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=28.92 E-value=97 Score=23.44 Aligned_cols=19 Identities=26% Similarity=0.387 Sum_probs=16.0
Q ss_pred ceeeeccHHHHHHHHhcCC
Q 027406 53 DIVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 53 d~i~GtS~Gai~a~~l~~~ 71 (223)
=.+.|.|.||.+++.++..
T Consensus 46 ~~~vG~S~Gg~~~~~~a~~ 64 (230)
T PF00561_consen 46 INLVGHSMGGMLALEYAAQ 64 (230)
T ss_dssp EEEEEETHHHHHHHHHHHH
T ss_pred eEEEEECCChHHHHHHHHH
Confidence 4678999999999988754
No 112
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=28.79 E-value=27 Score=29.79 Aligned_cols=19 Identities=32% Similarity=0.510 Sum_probs=16.3
Q ss_pred ceeeeccHHHHHHHHhcCC
Q 027406 53 DIVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 53 d~i~GtS~Gai~a~~l~~~ 71 (223)
=.|+|.|+||-+|..+++.
T Consensus 168 v~l~GDSaGGNia~~va~r 186 (336)
T KOG1515|consen 168 VFLAGDSAGGNIAHVVAQR 186 (336)
T ss_pred EEEEccCccHHHHHHHHHH
Confidence 3789999999999988854
No 113
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=28.60 E-value=35 Score=28.40 Aligned_cols=18 Identities=28% Similarity=0.479 Sum_probs=15.5
Q ss_pred eeeeccHHHHHHHHhcCC
Q 027406 54 IVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (223)
.+.|.|.||.+++.++..
T Consensus 137 ~l~GhSmGG~ia~~~a~~ 154 (330)
T PLN02298 137 FLYGESMGGAICLLIHLA 154 (330)
T ss_pred EEEEecchhHHHHHHHhc
Confidence 799999999999877753
No 114
>PLN02965 Probable pheophorbidase
Probab=28.41 E-value=34 Score=27.25 Aligned_cols=19 Identities=32% Similarity=0.221 Sum_probs=16.4
Q ss_pred ceeeeccHHHHHHHHhcCC
Q 027406 53 DIVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 53 d~i~GtS~Gai~a~~l~~~ 71 (223)
=+++|.|.||.++..++..
T Consensus 74 ~~lvGhSmGG~ia~~~a~~ 92 (255)
T PLN02965 74 VILVGHSIGGGSVTEALCK 92 (255)
T ss_pred EEEEecCcchHHHHHHHHh
Confidence 3889999999999988764
No 115
>PRK10566 esterase; Provisional
Probab=28.34 E-value=34 Score=26.94 Aligned_cols=18 Identities=33% Similarity=0.495 Sum_probs=15.7
Q ss_pred eeeeccHHHHHHHHhcCC
Q 027406 54 IVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (223)
.+.|.|.||.+++.++..
T Consensus 110 ~v~G~S~Gg~~al~~~~~ 127 (249)
T PRK10566 110 AVGGASMGGMTALGIMAR 127 (249)
T ss_pred eEEeecccHHHHHHHHHh
Confidence 689999999999988754
No 116
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=27.54 E-value=39 Score=25.83 Aligned_cols=18 Identities=44% Similarity=0.634 Sum_probs=15.3
Q ss_pred eeeeccHHHHHHHHhcCC
Q 027406 54 IVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (223)
.+.|.|.||.++..++..
T Consensus 82 ~liG~S~Gg~~a~~~a~~ 99 (251)
T TIGR02427 82 VFCGLSLGGLIAQGLAAR 99 (251)
T ss_pred EEEEeCchHHHHHHHHHH
Confidence 578999999999987754
No 117
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=27.49 E-value=41 Score=26.00 Aligned_cols=18 Identities=39% Similarity=0.595 Sum_probs=15.2
Q ss_pred eeeeccHHHHHHHHhcCC
Q 027406 54 IVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (223)
.++|.|.||.++..++..
T Consensus 83 ~l~G~S~Gg~~a~~~a~~ 100 (257)
T TIGR03611 83 HFVGHALGGLIGLQLALR 100 (257)
T ss_pred EEEEechhHHHHHHHHHH
Confidence 588999999999887743
No 118
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=27.08 E-value=2.1e+02 Score=25.17 Aligned_cols=19 Identities=37% Similarity=0.462 Sum_probs=16.4
Q ss_pred ceeeeccHHHHHHHHhcCC
Q 027406 53 DIVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 53 d~i~GtS~Gai~a~~l~~~ 71 (223)
-.|+|-|.||+.|+.++..
T Consensus 290 ~~IaG~S~GGl~AL~~al~ 308 (411)
T PRK10439 290 TVVAGQSFGGLAALYAGLH 308 (411)
T ss_pred eEEEEEChHHHHHHHHHHh
Confidence 4799999999999988754
No 119
>PRK03592 haloalkane dehalogenase; Provisional
Probab=26.98 E-value=44 Score=27.19 Aligned_cols=19 Identities=21% Similarity=0.296 Sum_probs=16.1
Q ss_pred ceeeeccHHHHHHHHhcCC
Q 027406 53 DIVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 53 d~i~GtS~Gai~a~~l~~~ 71 (223)
=.++|.|.||.+|..++..
T Consensus 95 ~~lvGhS~Gg~ia~~~a~~ 113 (295)
T PRK03592 95 VVLVGHDWGSALGFDWAAR 113 (295)
T ss_pred eEEEEECHHHHHHHHHHHh
Confidence 4678999999999988764
No 120
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=26.80 E-value=42 Score=27.35 Aligned_cols=18 Identities=22% Similarity=0.303 Sum_probs=16.0
Q ss_pred eeeeccHHHHHHHHhcCC
Q 027406 54 IVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (223)
.++|.|+||.+++.++..
T Consensus 141 ~~~G~S~GG~~a~~~a~~ 158 (275)
T TIGR02821 141 GITGHSMGGHGALVIALK 158 (275)
T ss_pred EEEEEChhHHHHHHHHHh
Confidence 789999999999988854
No 121
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=26.78 E-value=45 Score=27.10 Aligned_cols=18 Identities=28% Similarity=0.473 Sum_probs=15.7
Q ss_pred eeeeccHHHHHHHHhcCC
Q 027406 54 IVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (223)
.++|.|.||.+|+.++..
T Consensus 105 ~lvGhS~Gg~va~~~a~~ 122 (294)
T PLN02824 105 FVICNSVGGVVGLQAAVD 122 (294)
T ss_pred EEEEeCHHHHHHHHHHHh
Confidence 578999999999988764
No 122
>TIGR00541 hisDCase_pyru histidine decarboxylase, pyruvoyl type. This enzyme converts histadine to histamine in a single step by catalyzing the release of CO2. This type is synthesized as an inactive single chain precursor, then cleaved into two chains. The Ser at the new N-terminus at the cleavage site is converted to a pyruvoyl group essential for activity. This type of histidine decarboxylase appears is known so far only in some Gram-positive bacteria, where it may play a role in amino acid catabolism. There is also a pyridoxal phosphate type histidine decarboxylase, as found in human, where histamine is a biologically active amine.
Probab=26.66 E-value=43 Score=27.48 Aligned_cols=66 Identities=12% Similarity=0.174 Sum_probs=41.2
Q ss_pred ccceeeeccHHHHHHHHhcCCCCCCCCcccHHHHHHHHHhhCCcccCCCccCCchhHHHHhhhccccccCCChHHHHHHH
Q 027406 51 YFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHCPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLT 130 (223)
Q Consensus 51 ~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 130 (223)
+++++.-+|-.++.+..+... +..-.+.-.+-.+.+|....|. +---+.||.++|.+..
T Consensus 73 QINm~tASSF~G~~G~iwGyD---------la~~~~i~~~~~~pLf~~kq~d------------Gs~lpVYda~PLldA~ 131 (310)
T TIGR00541 73 QINMLTASSFCGVAGQVIGHD---------IARHDSIANDEAKPLFEEKQFD------------GSELKIYDAKPLLDAG 131 (310)
T ss_pred eeeeeeeecccCcCccEeeee---------hhcCccccccccCcceeecccC------------CCCCccccchhHHHHH
Confidence 478899999888887766532 1111111112244566665532 1123579999999999
Q ss_pred HHHhccc
Q 027406 131 KEILEDI 137 (223)
Q Consensus 131 ~~~~~~~ 137 (223)
.++||..
T Consensus 132 ~elFGt~ 138 (310)
T TIGR00541 132 IELFGTE 138 (310)
T ss_pred HHHhCCC
Confidence 9999954
No 123
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=26.26 E-value=1.2e+02 Score=27.70 Aligned_cols=22 Identities=23% Similarity=-0.043 Sum_probs=18.5
Q ss_pred cccccceeeeccHHHHHHHHhc
Q 027406 48 IADYFDIVAGTSTGGLIGTMLT 69 (223)
Q Consensus 48 ~~~~fd~i~GtS~Gai~a~~l~ 69 (223)
.+..+|.++|.|.|-+.|+..+
T Consensus 262 ~GI~Pdav~GHSlGE~aAa~aA 283 (538)
T TIGR02816 262 FAIKPDFALGYSKGEASMWASL 283 (538)
T ss_pred cCCCCCEEeecCHHHHHHHHHh
Confidence 4566899999999999988766
No 124
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=26.19 E-value=48 Score=25.70 Aligned_cols=18 Identities=33% Similarity=0.506 Sum_probs=15.5
Q ss_pred eeeeccHHHHHHHHhcCC
Q 027406 54 IVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (223)
.++|.|.||.+++.++..
T Consensus 98 ~l~G~S~Gg~~a~~~a~~ 115 (212)
T TIGR01840 98 YVTGLSAGGGMTAVLGCT 115 (212)
T ss_pred EEEEECHHHHHHHHHHHh
Confidence 589999999999888754
No 125
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=25.81 E-value=40 Score=28.43 Aligned_cols=18 Identities=22% Similarity=0.396 Sum_probs=15.6
Q ss_pred eeeeccHHHHHHHHhcCC
Q 027406 54 IVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (223)
.++|.|.||.+++.++..
T Consensus 165 ~LvGhSmGG~val~~a~~ 182 (349)
T PLN02385 165 FLFGQSMGGAVALKVHLK 182 (349)
T ss_pred EEEEeccchHHHHHHHHh
Confidence 788999999999888754
No 126
>PRK00870 haloalkane dehalogenase; Provisional
Probab=25.54 E-value=48 Score=27.14 Aligned_cols=18 Identities=39% Similarity=0.512 Sum_probs=15.4
Q ss_pred eeeeccHHHHHHHHhcCC
Q 027406 54 IVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (223)
.++|.|.||.+|..++..
T Consensus 118 ~lvGhS~Gg~ia~~~a~~ 135 (302)
T PRK00870 118 TLVCQDWGGLIGLRLAAE 135 (302)
T ss_pred EEEEEChHHHHHHHHHHh
Confidence 578999999999988754
No 127
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=25.54 E-value=50 Score=25.15 Aligned_cols=18 Identities=39% Similarity=0.525 Sum_probs=15.1
Q ss_pred eeeeccHHHHHHHHhcCC
Q 027406 54 IVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (223)
.++|.|.||.++..++..
T Consensus 68 ~lvG~S~Gg~~a~~~a~~ 85 (245)
T TIGR01738 68 IWLGWSLGGLVALHIAAT 85 (245)
T ss_pred EEEEEcHHHHHHHHHHHH
Confidence 588999999999887753
No 128
>PHA03298 envelope glycoprotein L; Provisional
Probab=25.19 E-value=39 Score=24.50 Aligned_cols=15 Identities=20% Similarity=0.138 Sum_probs=11.9
Q ss_pred HHHHhhccCCCCCCc
Q 027406 178 DICVGTSAAPTYLPA 192 (223)
Q Consensus 178 ~av~AS~A~P~~F~p 192 (223)
-++..||++|+.|+-
T Consensus 15 ial~sscaa~~a~k~ 29 (167)
T PHA03298 15 IALCSSCAAPGAFKD 29 (167)
T ss_pred HHHHhhccCCCCcCC
Confidence 356789999999964
No 129
>PRK10749 lysophospholipase L2; Provisional
Probab=25.17 E-value=48 Score=27.74 Aligned_cols=18 Identities=28% Similarity=0.307 Sum_probs=14.7
Q ss_pred eeeeccHHHHHHHHhcCC
Q 027406 54 IVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (223)
.++|.|.||.+++.++..
T Consensus 134 ~l~GhSmGG~ia~~~a~~ 151 (330)
T PRK10749 134 YALAHSMGGAILTLFLQR 151 (330)
T ss_pred EEEEEcHHHHHHHHHHHh
Confidence 578999999999876643
No 130
>PLN02761 lipase class 3 family protein
Probab=25.09 E-value=98 Score=28.13 Aligned_cols=16 Identities=25% Similarity=0.370 Sum_probs=14.1
Q ss_pred eeeeccHHHHHHHHhc
Q 027406 54 IVAGTSTGGLIGTMLT 69 (223)
Q Consensus 54 ~i~GtS~Gai~a~~l~ 69 (223)
.|+|.|.||-+|.+.+
T Consensus 297 tVTGHSLGGALAtLaA 312 (527)
T PLN02761 297 TVTGHSLGASLALVSA 312 (527)
T ss_pred EEeccchHHHHHHHHH
Confidence 5889999999998866
No 131
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=23.78 E-value=1.1e+02 Score=23.88 Aligned_cols=15 Identities=20% Similarity=-0.031 Sum_probs=12.2
Q ss_pred ceeeeccHHHHHHHH
Q 027406 53 DIVAGTSTGGLIGTM 67 (223)
Q Consensus 53 d~i~GtS~Gai~a~~ 67 (223)
-.++|+|+|+++..-
T Consensus 115 ~~i~G~SAGa~i~~~ 129 (212)
T cd03146 115 VVYIGWSAGSNCWFP 129 (212)
T ss_pred CEEEEECHhHHhhCC
Confidence 368999999998654
No 132
>PRK10640 rhaB rhamnulokinase; Provisional
Probab=23.76 E-value=2e+02 Score=25.64 Aligned_cols=51 Identities=20% Similarity=0.261 Sum_probs=30.6
Q ss_pred eEEEEEeeCCchhhHHHHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcCCC
Q 027406 11 KITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPN 72 (223)
Q Consensus 11 ~~~~L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~ 72 (223)
..+.|.+.|||+|--.-+.++.-+ + |. ++. ..+. -+++.|+.+.++++.|.
T Consensus 375 ~~~~i~~~GGga~s~~w~Qi~ADv---l----g~--pV~-~~~~-ea~alGaa~~a~~a~G~ 425 (471)
T PRK10640 375 PFSQLHIVGGGCQNALLNQLCADA---C----GI--RVI-AGPV-EASTLGNIGIQLMTLDE 425 (471)
T ss_pred CcceEEEECChhhhHHHHHHHHHH---h----CC--Cee-eCCh-hHHHHHHHHHHHHHcCC
Confidence 456789999999865443333222 2 21 222 1221 36678999998888874
No 133
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=23.73 E-value=48 Score=26.51 Aligned_cols=18 Identities=22% Similarity=0.329 Sum_probs=15.7
Q ss_pred eeeeccHHHHHHHHhcCC
Q 027406 54 IVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (223)
.++|.|.||.++..++..
T Consensus 104 ~lvG~S~Gg~ia~~~a~~ 121 (282)
T TIGR03343 104 HLVGNSMGGATALNFALE 121 (282)
T ss_pred eEEEECchHHHHHHHHHh
Confidence 689999999999988764
No 134
>PRK10349 carboxylesterase BioH; Provisional
Probab=23.53 E-value=57 Score=25.79 Aligned_cols=21 Identities=33% Similarity=0.447 Sum_probs=16.7
Q ss_pred cccceeeeccHHHHHHHHhcCC
Q 027406 50 DYFDIVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 50 ~~fd~i~GtS~Gai~a~~l~~~ 71 (223)
+.+ .++|.|.||.++..++..
T Consensus 74 ~~~-~lvGhS~Gg~ia~~~a~~ 94 (256)
T PRK10349 74 DKA-IWLGWSLGGLVASQIALT 94 (256)
T ss_pred CCe-EEEEECHHHHHHHHHHHh
Confidence 345 468999999999988754
No 135
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=23.46 E-value=57 Score=26.74 Aligned_cols=17 Identities=18% Similarity=0.249 Sum_probs=14.8
Q ss_pred eeeeccHHHHHHHHhcC
Q 027406 54 IVAGTSTGGLIGTMLTA 70 (223)
Q Consensus 54 ~i~GtS~Gai~a~~l~~ 70 (223)
.++|.|.||.+|..++.
T Consensus 115 ~lIGhSlGa~vAg~~a~ 131 (275)
T cd00707 115 HLIGHSLGAHVAGFAGK 131 (275)
T ss_pred EEEEecHHHHHHHHHHH
Confidence 57899999999988874
No 136
>PLN02719 triacylglycerol lipase
Probab=22.89 E-value=1.2e+02 Score=27.62 Aligned_cols=16 Identities=31% Similarity=0.567 Sum_probs=14.3
Q ss_pred eeeeccHHHHHHHHhc
Q 027406 54 IVAGTSTGGLIGTMLT 69 (223)
Q Consensus 54 ~i~GtS~Gai~a~~l~ 69 (223)
.|+|.|.||-+|.+.+
T Consensus 301 tVTGHSLGGALAtLaA 316 (518)
T PLN02719 301 TVTGHSLGGALAVLSA 316 (518)
T ss_pred EEecCcHHHHHHHHHH
Confidence 5899999999998876
No 137
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=22.70 E-value=44 Score=27.69 Aligned_cols=19 Identities=37% Similarity=0.473 Sum_probs=16.0
Q ss_pred ceeeeccHHHHHHHHhcCC
Q 027406 53 DIVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 53 d~i~GtS~Gai~a~~l~~~ 71 (223)
=.++|.|+||.+++.++..
T Consensus 154 i~v~GdSAGG~La~~~a~~ 172 (312)
T COG0657 154 IAVAGDSAGGHLALALALA 172 (312)
T ss_pred eEEEecCcccHHHHHHHHH
Confidence 3688999999999988853
No 138
>PRK13929 rod-share determining protein MreBH; Provisional
Probab=22.69 E-value=47 Score=28.10 Aligned_cols=10 Identities=30% Similarity=0.577 Sum_probs=8.1
Q ss_pred EEEeeCCchh
Q 027406 14 VLSIDGGGVK 23 (223)
Q Consensus 14 ~L~LdGGG~r 23 (223)
-++|.|||++
T Consensus 281 gIvLtGG~s~ 290 (335)
T PRK13929 281 GVILTGGGAL 290 (335)
T ss_pred CEEEEchhhh
Confidence 4889999875
No 139
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=22.51 E-value=1.3e+02 Score=27.20 Aligned_cols=45 Identities=20% Similarity=0.316 Sum_probs=32.2
Q ss_pred chhhHH-HHHHHHHHHHHhhccCCCCCccccccceeeeccHHHHHHHHhcC
Q 027406 21 GVKGII-PGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTA 70 (223)
Q Consensus 21 G~rG~~-~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~ 70 (223)
|.-|++ ++.+|+.+.+.+....|+.-+ =-+.|+|+||..+.++..
T Consensus 169 gN~gl~Dq~~AL~wv~~~I~~FGGdp~~-----vTl~G~saGa~~v~~l~~ 214 (545)
T KOG1516|consen 169 GNLGLFDQLLALRWVKDNIPSFGGDPKN-----VTLFGHSAGAASVSLLTL 214 (545)
T ss_pred CcccHHHHHHHHHHHHHHHHhcCCCCCe-----EEEEeechhHHHHHHHhc
Confidence 555664 667888888888877665322 246699999999977664
No 140
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=22.49 E-value=1.5e+02 Score=25.53 Aligned_cols=20 Identities=20% Similarity=0.252 Sum_probs=16.8
Q ss_pred cceeeeccHHHHHHHHhcCC
Q 027406 52 FDIVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 52 fd~i~GtS~Gai~a~~l~~~ 71 (223)
.=.++|+|.||.+|++.++.
T Consensus 176 ~~g~~G~SmGG~~A~laa~~ 195 (348)
T PF09752_consen 176 PLGLTGISMGGHMAALAASN 195 (348)
T ss_pred ceEEEEechhHhhHHhhhhc
Confidence 34789999999999987764
No 141
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=22.13 E-value=62 Score=26.66 Aligned_cols=18 Identities=22% Similarity=0.291 Sum_probs=15.4
Q ss_pred eeeeccHHHHHHHHhcCC
Q 027406 54 IVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (223)
.++|.|.||.+++.++..
T Consensus 98 ~lvG~S~GG~ia~~~a~~ 115 (306)
T TIGR01249 98 LVFGGSWGSTLALAYAQT 115 (306)
T ss_pred EEEEECHHHHHHHHHHHH
Confidence 688999999999988753
No 142
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=21.90 E-value=2e+02 Score=25.23 Aligned_cols=18 Identities=17% Similarity=0.097 Sum_probs=15.6
Q ss_pred eeeeccHHHHHHHHhcCC
Q 027406 54 IVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (223)
.+.|.|.||.+++.++..
T Consensus 268 ~l~G~S~GG~~Al~~A~~ 285 (414)
T PRK05077 268 AAFGFRFGANVAVRLAYL 285 (414)
T ss_pred EEEEEChHHHHHHHHHHh
Confidence 688999999999988754
No 143
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=21.81 E-value=64 Score=26.45 Aligned_cols=18 Identities=22% Similarity=0.338 Sum_probs=15.6
Q ss_pred eeeeccHHHHHHHHhcCC
Q 027406 54 IVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (223)
.++|.|.||.+++.++..
T Consensus 102 ~LvG~SmGG~vAl~~A~~ 119 (266)
T TIGR03101 102 TLWGLRLGALLALDAANP 119 (266)
T ss_pred EEEEECHHHHHHHHHHHh
Confidence 689999999999988754
No 144
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=21.57 E-value=63 Score=25.35 Aligned_cols=18 Identities=22% Similarity=0.372 Sum_probs=15.9
Q ss_pred eeeeccHHHHHHHHhcCC
Q 027406 54 IVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (223)
-|.|+|-||-+|+++++.
T Consensus 25 gi~G~SkGaelALllAs~ 42 (213)
T PF08840_consen 25 GIIGISKGAELALLLASR 42 (213)
T ss_dssp EEEEETHHHHHHHHHHHH
T ss_pred EEEEECHHHHHHHHHHhc
Confidence 577999999999999864
No 145
>PLN02847 triacylglycerol lipase
Probab=21.46 E-value=60 Score=30.01 Aligned_cols=17 Identities=35% Similarity=0.485 Sum_probs=14.5
Q ss_pred eeeeccHHHHHHHHhcC
Q 027406 54 IVAGTSTGGLIGTMLTA 70 (223)
Q Consensus 54 ~i~GtS~Gai~a~~l~~ 70 (223)
+|+|+|.||-+|++++.
T Consensus 254 VITGHSLGGGVAALLAi 270 (633)
T PLN02847 254 KIVGHSLGGGTAALLTY 270 (633)
T ss_pred EEeccChHHHHHHHHHH
Confidence 57899999999988763
No 146
>PRK10985 putative hydrolase; Provisional
Probab=21.38 E-value=1.1e+02 Score=25.47 Aligned_cols=17 Identities=29% Similarity=0.309 Sum_probs=13.5
Q ss_pred ceeeeccHHHHHHHHhc
Q 027406 53 DIVAGTSTGGLIGTMLT 69 (223)
Q Consensus 53 d~i~GtS~Gai~a~~l~ 69 (223)
=+++|.|.||.+++.++
T Consensus 133 ~~~vG~S~GG~i~~~~~ 149 (324)
T PRK10985 133 TAAVGYSLGGNMLACLL 149 (324)
T ss_pred EEEEEecchHHHHHHHH
Confidence 48999999998766544
No 147
>KOG3456 consensus NADH:ubiquinone oxidoreductase, NDUFS6/13 kDa subunit [Energy production and conversion]
Probab=20.65 E-value=59 Score=22.68 Aligned_cols=20 Identities=25% Similarity=0.275 Sum_probs=14.5
Q ss_pred CCCCCCCCCeEEEEEeeCCc
Q 027406 2 IARTIAKGKKITVLSIDGGG 21 (223)
Q Consensus 2 ~~~~~~~~~~~~~L~LdGGG 21 (223)
|++-|...=.-||++.|||+
T Consensus 68 I~e~Pp~e~d~RVV~CdGg~ 87 (120)
T KOG3456|consen 68 ISEVPPIEVDGRVVACDGGT 87 (120)
T ss_pred hhcCChhhccceEEEecCCC
Confidence 45555555578999999987
No 148
>PLN02578 hydrolase
Probab=20.40 E-value=70 Score=27.10 Aligned_cols=19 Identities=21% Similarity=0.403 Sum_probs=16.1
Q ss_pred ceeeeccHHHHHHHHhcCC
Q 027406 53 DIVAGTSTGGLIGTMLTAP 71 (223)
Q Consensus 53 d~i~GtS~Gai~a~~l~~~ 71 (223)
-.++|.|.||.++..++..
T Consensus 154 ~~lvG~S~Gg~ia~~~A~~ 172 (354)
T PLN02578 154 AVLVGNSLGGFTALSTAVG 172 (354)
T ss_pred eEEEEECHHHHHHHHHHHh
Confidence 3688999999999988864
No 149
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=20.15 E-value=71 Score=27.80 Aligned_cols=17 Identities=29% Similarity=0.415 Sum_probs=14.7
Q ss_pred eeeeccHHHHHHHHhcC
Q 027406 54 IVAGTSTGGLIGTMLTA 70 (223)
Q Consensus 54 ~i~GtS~Gai~a~~l~~ 70 (223)
.+.|.|+||++++.++.
T Consensus 211 ~lvGhSmGG~ial~~a~ 227 (395)
T PLN02652 211 FLFGHSTGGAVVLKAAS 227 (395)
T ss_pred EEEEECHHHHHHHHHHh
Confidence 78899999999987764
Done!