Query 027408
Match_columns 223
No_of_seqs 307 out of 2076
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 15:46:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027408.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027408hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jtm_A Formate dehydrogenase, 100.0 1.6E-56 5.3E-61 392.6 22.0 223 1-223 129-351 (351)
2 4g2n_A D-isomer specific 2-hyd 100.0 1.5E-52 5.2E-57 366.4 25.0 208 1-213 137-345 (345)
3 3kb6_A D-lactate dehydrogenase 100.0 1.3E-53 4.5E-58 372.2 17.5 209 1-213 107-331 (334)
4 2j6i_A Formate dehydrogenase; 100.0 1.5E-52 5.1E-57 369.5 21.5 221 1-221 129-356 (364)
5 4e5n_A Thermostable phosphite 100.0 1.6E-51 5.4E-56 358.7 21.9 211 1-214 110-327 (330)
6 3evt_A Phosphoglycerate dehydr 100.0 5.8E-52 2E-56 360.2 18.7 214 1-220 104-318 (324)
7 4hy3_A Phosphoglycerate oxidor 100.0 6.5E-51 2.2E-55 358.1 25.5 215 1-220 140-355 (365)
8 3gg9_A D-3-phosphoglycerate de 100.0 2.7E-51 9.3E-56 359.7 22.6 210 1-211 117-334 (352)
9 3pp8_A Glyoxylate/hydroxypyruv 100.0 1.2E-51 4.1E-56 357.2 18.9 208 1-218 108-315 (315)
10 3hg7_A D-isomer specific 2-hyd 100.0 2.8E-51 9.7E-56 355.6 19.5 210 1-220 109-318 (324)
11 2nac_A NAD-dependent formate d 100.0 2.1E-50 7.1E-55 358.0 22.9 220 1-220 156-375 (393)
12 2pi1_A D-lactate dehydrogenase 100.0 2.5E-51 8.4E-56 357.9 14.9 210 1-216 107-331 (334)
13 4dgs_A Dehydrogenase; structur 100.0 2.1E-50 7.1E-55 352.3 20.2 200 1-206 136-335 (340)
14 3k5p_A D-3-phosphoglycerate de 100.0 1.8E-49 6.1E-54 353.4 24.0 207 1-213 123-334 (416)
15 2yq5_A D-isomer specific 2-hyd 100.0 1.3E-49 4.3E-54 347.7 20.3 207 1-214 113-333 (343)
16 1sc6_A PGDH, D-3-phosphoglycer 100.0 2.9E-49 1E-53 352.5 21.3 207 1-215 112-322 (404)
17 1j4a_A D-LDH, D-lactate dehydr 100.0 1.7E-48 5.8E-53 340.1 20.9 207 1-214 113-332 (333)
18 1qp8_A Formate dehydrogenase; 100.0 6.9E-48 2.4E-52 332.2 21.1 208 1-220 92-302 (303)
19 1dxy_A D-2-hydroxyisocaproate 100.0 2.2E-48 7.4E-53 339.4 16.8 208 1-216 111-332 (333)
20 2g76_A 3-PGDH, D-3-phosphoglyc 100.0 1.7E-47 5.9E-52 333.6 21.8 201 1-206 132-332 (335)
21 1mx3_A CTBP1, C-terminal bindi 100.0 6.4E-47 2.2E-51 331.4 24.5 213 1-214 128-347 (347)
22 3gvx_A Glycerate dehydrogenase 100.0 1.3E-47 4.5E-52 328.1 18.8 193 1-205 91-284 (290)
23 1wwk_A Phosphoglycerate dehydr 100.0 5.9E-47 2E-51 327.0 22.7 199 1-203 109-307 (307)
24 1xdw_A NAD+-dependent (R)-2-hy 100.0 3.1E-47 1E-51 331.9 18.5 205 1-212 112-330 (331)
25 1gdh_A D-glycerate dehydrogena 100.0 2.4E-46 8.3E-51 324.9 23.3 203 1-206 110-314 (320)
26 2ekl_A D-3-phosphoglycerate de 100.0 2E-46 7E-51 324.4 19.4 199 1-206 111-312 (313)
27 2cuk_A Glycerate dehydrogenase 100.0 8.6E-46 2.9E-50 320.2 23.2 202 1-212 108-310 (311)
28 3ba1_A HPPR, hydroxyphenylpyru 100.0 2.5E-45 8.6E-50 319.8 21.9 203 1-212 130-332 (333)
29 2w2k_A D-mandelate dehydrogena 100.0 4.8E-45 1.6E-49 320.0 19.9 212 1-215 123-340 (348)
30 2gcg_A Glyoxylate reductase/hy 100.0 3.2E-44 1.1E-48 312.8 23.8 210 1-213 119-329 (330)
31 2d0i_A Dehydrogenase; structur 100.0 1.7E-44 5.9E-49 314.8 21.5 208 1-214 107-319 (333)
32 2dbq_A Glyoxylate reductase; D 100.0 4.8E-44 1.6E-48 312.2 20.0 209 1-214 110-323 (334)
33 1ygy_A PGDH, D-3-phosphoglycer 100.0 1.8E-41 6.2E-46 311.9 24.7 208 1-215 109-316 (529)
34 3oet_A Erythronate-4-phosphate 100.0 2.3E-42 8E-47 304.5 13.3 168 31-205 114-285 (381)
35 2o4c_A Erythronate-4-phosphate 100.0 9.4E-41 3.2E-45 294.8 14.4 167 32-205 112-282 (380)
36 1v8b_A Adenosylhomocysteinase; 100.0 1.3E-31 4.4E-36 242.1 6.4 186 6-206 232-426 (479)
37 3d64_A Adenosylhomocysteinase; 100.0 7E-32 2.4E-36 244.6 3.5 185 6-206 252-441 (494)
38 3ce6_A Adenosylhomocysteinase; 99.9 4.5E-22 1.5E-26 180.8 7.0 164 32-206 270-441 (494)
39 1gtm_A Glutamate dehydrogenase 99.8 4.2E-22 1.4E-26 177.9 -0.2 155 31-201 206-385 (419)
40 2vhw_A Alanine dehydrogenase; 99.8 2.7E-19 9.3E-24 158.0 11.1 130 32-184 164-307 (377)
41 3n58_A Adenosylhomocysteinase; 99.7 2.8E-18 9.6E-23 152.9 8.8 105 31-140 242-347 (464)
42 3h9u_A Adenosylhomocysteinase; 99.7 1.2E-17 4E-22 148.9 9.8 106 31-141 206-312 (436)
43 3gvp_A Adenosylhomocysteinase 99.7 1.2E-16 4.1E-21 142.1 8.9 104 31-139 215-319 (435)
44 3d4o_A Dipicolinate synthase s 99.7 3.4E-16 1.2E-20 133.6 9.7 97 31-132 150-248 (293)
45 2eez_A Alanine dehydrogenase; 99.6 5.6E-17 1.9E-21 142.8 5.0 155 32-205 162-335 (369)
46 2rir_A Dipicolinate synthase, 99.6 4.9E-16 1.7E-20 133.0 10.0 98 30-132 151-250 (300)
47 3ggo_A Prephenate dehydrogenas 99.6 1.3E-14 4.6E-19 125.0 15.9 166 17-188 15-188 (314)
48 4gbj_A 6-phosphogluconate dehy 99.6 1.4E-15 4.9E-20 130.1 7.8 121 37-157 6-126 (297)
49 3obb_A Probable 3-hydroxyisobu 99.6 1.8E-15 6.1E-20 129.7 7.6 120 37-156 4-125 (300)
50 3qsg_A NAD-binding phosphogluc 99.6 6.9E-15 2.4E-19 126.5 11.2 144 14-159 2-150 (312)
51 3l6d_A Putative oxidoreductase 99.6 3E-15 1E-19 128.5 8.0 125 33-157 6-130 (306)
52 3doj_A AT3G25530, dehydrogenas 99.6 4.9E-15 1.7E-19 127.2 8.6 120 31-150 16-137 (310)
53 2g5c_A Prephenate dehydrogenas 99.6 5.3E-14 1.8E-18 118.7 14.9 145 37-186 2-154 (281)
54 4dll_A 2-hydroxy-3-oxopropiona 99.6 2.4E-15 8.3E-20 129.8 6.6 123 33-155 28-151 (320)
55 3qha_A Putative oxidoreductase 99.6 9.4E-15 3.2E-19 124.7 10.0 119 36-156 15-133 (296)
56 3pef_A 6-phosphogluconate dehy 99.5 9.8E-15 3.4E-19 123.8 8.4 114 37-150 2-117 (287)
57 4e21_A 6-phosphogluconate dehy 99.5 1.6E-14 5.6E-19 126.6 9.7 123 34-158 20-145 (358)
58 1gpj_A Glutamyl-tRNA reductase 99.5 1.8E-14 6.3E-19 128.1 8.3 141 33-205 164-326 (404)
59 3pdu_A 3-hydroxyisobutyrate de 99.5 1.1E-14 3.9E-19 123.4 6.0 113 37-149 2-116 (287)
60 4e12_A Diketoreductase; oxidor 99.5 4.6E-13 1.6E-17 113.5 15.6 140 37-188 5-169 (283)
61 2h78_A Hibadh, 3-hydroxyisobut 99.5 1.5E-14 5.2E-19 123.3 6.3 112 37-148 4-117 (302)
62 3g0o_A 3-hydroxyisobutyrate de 99.5 1.5E-14 5.1E-19 123.7 6.0 115 35-149 6-123 (303)
63 4ezb_A Uncharacterized conserv 99.5 7.3E-14 2.5E-18 120.4 10.0 136 14-157 6-150 (317)
64 3b1f_A Putative prephenate deh 99.5 1.5E-13 5.3E-18 116.3 10.5 144 36-181 6-158 (290)
65 1c1d_A L-phenylalanine dehydro 99.4 8.3E-13 2.8E-17 115.3 10.9 108 33-148 172-280 (355)
66 4gwg_A 6-phosphogluconate dehy 99.4 4.8E-13 1.6E-17 121.4 9.4 122 36-158 4-133 (484)
67 3ktd_A Prephenate dehydrogenas 99.4 3.7E-13 1.3E-17 117.2 8.1 139 36-179 8-154 (341)
68 2zyd_A 6-phosphogluconate dehy 99.4 5.4E-13 1.8E-17 121.1 8.9 121 33-154 12-139 (480)
69 1x13_A NAD(P) transhydrogenase 99.4 6.9E-13 2.3E-17 117.9 9.3 102 33-135 169-301 (401)
70 1vpd_A Tartronate semialdehyde 99.4 2.3E-13 7.8E-18 115.6 5.7 112 37-148 6-119 (299)
71 2f1k_A Prephenate dehydrogenas 99.4 7.5E-12 2.6E-16 105.2 13.9 143 37-186 1-148 (279)
72 3p2y_A Alanine dehydrogenase/p 99.4 1.9E-12 6.6E-17 113.8 9.8 145 33-203 181-357 (381)
73 3cky_A 2-hydroxymethyl glutara 99.4 9.9E-13 3.4E-17 111.7 7.5 112 37-148 5-118 (301)
74 2p4q_A 6-phosphogluconate dehy 99.4 2.6E-12 8.8E-17 117.1 10.5 119 36-155 10-136 (497)
75 3dtt_A NADP oxidoreductase; st 99.3 6E-13 2E-17 110.5 5.5 98 30-130 13-126 (245)
76 1yb4_A Tartronic semialdehyde 99.3 1.2E-12 4E-17 110.8 7.2 111 37-148 4-116 (295)
77 1l7d_A Nicotinamide nucleotide 99.3 6.6E-12 2.2E-16 110.9 11.6 99 33-132 169-300 (384)
78 4dio_A NAD(P) transhydrogenase 99.3 4.5E-12 1.5E-16 112.3 10.2 100 33-133 187-319 (405)
79 2pv7_A T-protein [includes: ch 99.3 7.2E-12 2.5E-16 106.9 11.0 136 13-178 5-142 (298)
80 2gf2_A Hibadh, 3-hydroxyisobut 99.3 1.5E-12 5E-17 110.4 6.5 109 37-145 1-111 (296)
81 2cvz_A Dehydrogenase, 3-hydrox 99.3 2.5E-12 8.4E-17 108.4 7.8 109 37-148 2-110 (289)
82 2uyy_A N-PAC protein; long-cha 99.3 3.2E-12 1.1E-16 109.5 8.5 113 36-148 30-144 (316)
83 2pgd_A 6-phosphogluconate dehy 99.3 4.5E-12 1.5E-16 115.1 9.5 118 37-155 3-128 (482)
84 2iz1_A 6-phosphogluconate dehy 99.3 5E-12 1.7E-16 114.6 9.5 118 37-155 6-130 (474)
85 2dpo_A L-gulonate 3-dehydrogen 99.3 3.4E-11 1.2E-15 103.9 13.1 141 36-188 6-171 (319)
86 1pgj_A 6PGDH, 6-PGDH, 6-phosph 99.3 6.2E-12 2.1E-16 114.1 8.3 119 37-156 2-131 (478)
87 1np3_A Ketol-acid reductoisome 99.3 8.9E-12 3.1E-16 108.3 7.8 136 33-179 13-155 (338)
88 1zej_A HBD-9, 3-hydroxyacyl-CO 99.2 4.7E-11 1.6E-15 101.8 11.8 138 34-188 10-155 (293)
89 3d1l_A Putative NADP oxidoredu 99.2 1.1E-11 3.6E-16 103.7 7.3 101 33-135 7-109 (266)
90 3ond_A Adenosylhomocysteinase; 99.2 2.7E-11 9.1E-16 109.5 9.7 96 31-131 260-355 (488)
91 1i36_A Conserved hypothetical 99.2 1.2E-11 4.1E-16 103.1 6.7 103 37-145 1-105 (264)
92 3fr7_A Putative ketol-acid red 99.2 2.1E-11 7.2E-16 109.7 6.9 97 32-131 49-157 (525)
93 2q3e_A UDP-glucose 6-dehydroge 99.2 2.7E-11 9.2E-16 109.6 7.0 138 37-174 6-181 (467)
94 2yjz_A Metalloreductase steap4 98.8 2.5E-12 8.5E-17 104.0 0.0 94 34-133 17-110 (201)
95 2d5c_A AROE, shikimate 5-dehyd 99.2 1.7E-10 5.8E-15 96.5 11.0 108 32-147 113-223 (263)
96 2izz_A Pyrroline-5-carboxylate 99.2 1.7E-10 5.7E-15 99.4 11.2 108 33-144 19-132 (322)
97 3gt0_A Pyrroline-5-carboxylate 99.2 4E-11 1.4E-15 99.4 7.0 104 37-144 3-111 (247)
98 3oj0_A Glutr, glutamyl-tRNA re 99.2 9.8E-11 3.4E-15 89.1 8.2 91 35-131 20-113 (144)
99 3tri_A Pyrroline-5-carboxylate 99.1 1.1E-10 3.6E-15 98.9 9.0 105 36-144 3-112 (280)
100 2hk9_A Shikimate dehydrogenase 99.1 9.1E-11 3.1E-15 99.0 8.1 95 32-129 125-222 (275)
101 1leh_A Leucine dehydrogenase; 99.1 1.6E-10 5.4E-15 101.3 8.9 108 33-148 170-279 (364)
102 3c24_A Putative oxidoreductase 99.1 1.1E-10 3.9E-15 98.6 7.7 92 37-131 12-104 (286)
103 3k6j_A Protein F01G10.3, confi 99.1 1.6E-09 5.5E-14 97.6 15.5 140 36-188 54-214 (460)
104 2ahr_A Putative pyrroline carb 99.1 4.1E-10 1.4E-14 93.6 10.6 101 37-145 4-105 (259)
105 2vns_A Metalloreductase steap3 99.1 1.3E-10 4.5E-15 94.5 6.2 95 35-134 27-121 (215)
106 2raf_A Putative dinucleotide-b 99.1 3.7E-10 1.3E-14 91.5 8.7 80 32-132 15-94 (209)
107 3pid_A UDP-glucose 6-dehydroge 99.1 3.7E-10 1.2E-14 101.1 9.5 116 30-147 30-172 (432)
108 1f0y_A HCDH, L-3-hydroxyacyl-C 99.0 6.1E-10 2.1E-14 94.8 9.3 116 37-155 16-160 (302)
109 1yqg_A Pyrroline-5-carboxylate 99.0 6.1E-10 2.1E-14 92.6 8.2 100 37-145 1-103 (263)
110 4a7p_A UDP-glucose dehydrogena 99.0 2.4E-09 8.2E-14 96.3 12.1 109 36-145 8-146 (446)
111 3gg2_A Sugar dehydrogenase, UD 99.0 1.2E-09 4.2E-14 98.3 10.2 107 37-144 3-138 (450)
112 1mv8_A GMD, GDP-mannose 6-dehy 99.0 6.3E-10 2.1E-14 99.7 8.2 107 37-144 1-140 (436)
113 3k96_A Glycerol-3-phosphate de 99.0 7.8E-10 2.7E-14 96.7 8.6 99 35-135 28-140 (356)
114 2i99_A MU-crystallin homolog; 99.0 7.3E-10 2.5E-14 95.2 7.5 111 34-153 133-248 (312)
115 3mog_A Probable 3-hydroxybutyr 99.0 3.1E-09 1.1E-13 96.4 11.4 116 36-156 5-145 (483)
116 2rcy_A Pyrroline carboxylate r 99.0 2.2E-09 7.5E-14 89.1 9.1 99 36-145 4-106 (262)
117 1bg6_A N-(1-D-carboxylethyl)-L 98.9 3.7E-09 1.3E-13 91.5 10.3 105 37-144 5-124 (359)
118 1txg_A Glycerol-3-phosphate de 98.9 1.8E-09 6.2E-14 92.6 7.9 105 37-144 1-124 (335)
119 2y0c_A BCEC, UDP-glucose dehyd 98.9 3.1E-09 1.1E-13 96.3 9.5 109 35-144 7-144 (478)
120 4huj_A Uncharacterized protein 98.9 1E-09 3.5E-14 89.5 5.3 90 36-131 23-116 (220)
121 1jay_A Coenzyme F420H2:NADP+ o 98.9 2.3E-09 7.9E-14 86.3 7.3 116 37-160 1-137 (212)
122 1dlj_A UDP-glucose dehydrogena 98.9 5.4E-09 1.8E-13 92.7 10.3 106 37-145 1-134 (402)
123 2ew2_A 2-dehydropantoate 2-red 98.9 3.1E-09 1.1E-13 90.1 8.4 109 37-148 4-127 (316)
124 1x0v_A GPD-C, GPDH-C, glycerol 98.9 2.6E-09 9.1E-14 92.5 7.9 95 36-132 8-128 (354)
125 1z82_A Glycerol-3-phosphate de 98.9 4.9E-09 1.7E-13 90.5 9.2 90 35-131 13-114 (335)
126 1yj8_A Glycerol-3-phosphate de 98.9 2.6E-09 8.9E-14 93.7 7.4 94 37-132 22-145 (375)
127 1evy_A Glycerol-3-phosphate de 98.9 1.1E-09 3.9E-14 95.5 4.7 94 38-133 17-129 (366)
128 1wdk_A Fatty oxidation complex 98.9 1.6E-08 5.6E-13 95.8 12.2 117 36-156 314-454 (715)
129 1pjc_A Protein (L-alanine dehy 98.8 1.9E-08 6.5E-13 88.0 11.4 97 33-129 164-268 (361)
130 2dc1_A L-aspartate dehydrogena 98.8 1.3E-08 4.5E-13 83.6 9.7 99 37-148 1-104 (236)
131 1zcj_A Peroxisomal bifunctiona 98.8 3.5E-08 1.2E-12 89.1 13.0 117 35-155 36-174 (463)
132 2wtb_A MFP2, fatty acid multif 98.8 4.2E-08 1.4E-12 93.1 12.8 116 37-156 313-452 (725)
133 2o3j_A UDP-glucose 6-dehydroge 98.8 8.3E-09 2.8E-13 93.6 7.5 107 37-144 10-151 (481)
134 3g79_A NDP-N-acetyl-D-galactos 98.8 1.4E-08 4.8E-13 91.9 8.9 105 36-141 18-160 (478)
135 1ks9_A KPA reductase;, 2-dehyd 98.8 8.4E-09 2.9E-13 86.5 6.9 92 37-131 1-100 (291)
136 1y81_A Conserved hypothetical 98.8 3.9E-08 1.3E-12 74.7 9.2 103 34-148 12-118 (138)
137 3ado_A Lambda-crystallin; L-gu 98.7 6.5E-08 2.2E-12 83.3 11.2 119 35-156 5-148 (319)
138 3ulk_A Ketol-acid reductoisome 98.7 3.5E-08 1.2E-12 87.6 9.4 96 32-131 33-134 (491)
139 3u62_A Shikimate dehydrogenase 98.7 1.6E-08 5.4E-13 84.4 6.3 106 33-145 106-214 (253)
140 3phh_A Shikimate dehydrogenase 98.7 4.9E-08 1.7E-12 82.1 9.1 94 36-131 118-212 (269)
141 3don_A Shikimate dehydrogenase 98.7 1.2E-08 4.2E-13 86.2 5.4 109 32-145 113-225 (277)
142 3c85_A Putative glutathione-re 98.7 2E-08 6.9E-13 79.0 5.7 95 32-128 35-139 (183)
143 3i83_A 2-dehydropantoate 2-red 98.7 1.8E-07 6.2E-12 80.2 12.0 107 37-148 3-124 (320)
144 3ojo_A CAP5O; rossmann fold, c 98.7 5.9E-08 2E-12 86.8 9.1 110 34-143 9-144 (431)
145 2egg_A AROE, shikimate 5-dehyd 98.7 1.1E-07 3.7E-12 81.0 10.3 111 32-147 137-257 (297)
146 3dfu_A Uncharacterized protein 98.7 5.3E-08 1.8E-12 80.1 8.0 71 35-128 5-75 (232)
147 2i76_A Hypothetical protein; N 98.7 9.3E-09 3.2E-13 86.5 3.1 87 37-131 3-92 (276)
148 2g1u_A Hypothetical protein TM 98.6 1.3E-07 4.4E-12 72.5 8.9 98 32-131 15-121 (155)
149 3hn2_A 2-dehydropantoate 2-red 98.6 2.4E-07 8.1E-12 79.2 11.4 108 37-150 3-124 (312)
150 2qyt_A 2-dehydropantoate 2-red 98.6 1.8E-08 6.2E-13 85.6 4.1 105 37-146 9-134 (317)
151 2duw_A Putative COA-binding pr 98.6 4.3E-08 1.5E-12 75.0 5.8 104 36-149 13-120 (145)
152 3hdj_A Probable ornithine cycl 98.6 3E-07 1E-11 79.0 11.4 89 35-131 120-216 (313)
153 3ghy_A Ketopantoate reductase 98.6 5.9E-08 2E-12 83.7 7.0 91 36-130 3-106 (335)
154 3hwr_A 2-dehydropantoate 2-red 98.6 1.4E-07 4.7E-12 80.9 8.8 106 33-143 16-134 (318)
155 2c2x_A Methylenetetrahydrofola 98.6 1.6E-07 5.3E-12 79.1 8.5 82 31-133 153-237 (281)
156 1b0a_A Protein (fold bifunctio 98.6 1.1E-07 3.7E-12 80.4 7.4 81 31-132 154-235 (288)
157 3l07_A Bifunctional protein fo 98.6 1.4E-07 4.9E-12 79.5 8.1 80 31-131 156-236 (285)
158 1a4i_A Methylenetetrahydrofola 98.6 1.9E-07 6.5E-12 79.3 8.9 82 31-133 160-242 (301)
159 3p2o_A Bifunctional protein fo 98.6 1.3E-07 4.5E-12 79.8 7.8 81 31-132 155-236 (285)
160 4a5o_A Bifunctional protein fo 98.6 1.7E-07 5.9E-12 79.0 8.4 81 31-132 156-237 (286)
161 3ic5_A Putative saccharopine d 98.5 9.5E-08 3.2E-12 69.0 5.7 89 35-128 4-100 (118)
162 3ngx_A Bifunctional protein fo 98.5 1.3E-07 4.5E-12 79.4 7.2 77 34-131 148-225 (276)
163 1x7d_A Ornithine cyclodeaminas 98.5 1.6E-07 5.6E-12 81.8 8.0 93 34-130 127-228 (350)
164 4a26_A Putative C-1-tetrahydro 98.5 1.2E-07 4.1E-12 80.6 6.8 81 31-132 160-243 (300)
165 1lss_A TRK system potassium up 98.5 5E-07 1.7E-11 67.1 9.4 90 36-127 4-102 (140)
166 3uuw_A Putative oxidoreductase 98.5 2.6E-07 9.1E-12 78.5 8.5 108 36-148 6-119 (308)
167 1edz_A 5,10-methylenetetrahydr 98.5 3.9E-08 1.3E-12 84.6 3.2 94 31-130 172-277 (320)
168 3fwz_A Inner membrane protein 98.5 2.8E-07 9.5E-12 69.5 7.2 89 37-127 8-104 (140)
169 3db2_A Putative NADPH-dependen 98.5 4E-07 1.4E-11 78.9 8.2 68 37-104 6-78 (354)
170 2z2v_A Hypothetical protein PH 98.5 2E-07 6.8E-12 81.7 6.2 109 33-148 13-127 (365)
171 4hkt_A Inositol 2-dehydrogenas 98.4 4.9E-07 1.7E-11 77.6 8.5 106 37-148 4-116 (331)
172 3c7a_A Octopine dehydrogenase; 98.4 3.6E-07 1.2E-11 80.6 7.5 89 37-127 3-115 (404)
173 3euw_A MYO-inositol dehydrogen 98.4 5.1E-07 1.7E-11 77.9 8.2 67 37-103 5-76 (344)
174 2hmt_A YUAA protein; RCK, KTN, 98.4 3.3E-07 1.1E-11 68.3 6.0 96 33-130 3-106 (144)
175 1omo_A Alanine dehydrogenase; 98.4 7.1E-07 2.4E-11 76.8 8.8 87 35-129 124-218 (322)
176 3q2i_A Dehydrogenase; rossmann 98.4 4.1E-07 1.4E-11 78.9 7.3 67 36-102 13-85 (354)
177 3e18_A Oxidoreductase; dehydro 98.4 5.3E-07 1.8E-11 78.5 7.9 66 37-102 6-75 (359)
178 1tlt_A Putative oxidoreductase 98.4 1.3E-06 4.4E-11 74.6 9.8 107 37-148 6-118 (319)
179 3o8q_A Shikimate 5-dehydrogena 98.4 3.4E-07 1.2E-11 77.5 5.8 96 31-130 121-223 (281)
180 2ewd_A Lactate dehydrogenase,; 98.4 7.2E-07 2.5E-11 76.4 7.7 105 36-142 4-135 (317)
181 1vl6_A Malate oxidoreductase; 98.4 2.6E-06 9E-11 74.7 11.3 97 31-132 187-298 (388)
182 2glx_A 1,5-anhydro-D-fructose 98.4 1E-06 3.6E-11 75.4 8.4 107 37-148 1-115 (332)
183 3rc1_A Sugar 3-ketoreductase; 98.4 8.6E-07 3E-11 76.9 8.0 69 35-103 26-100 (350)
184 3llv_A Exopolyphosphatase-rela 98.4 8.4E-07 2.9E-11 66.5 6.9 90 34-125 4-101 (141)
185 2ho3_A Oxidoreductase, GFO/IDH 98.4 1.3E-06 4.4E-11 74.8 8.8 107 37-148 2-115 (325)
186 1j5p_A Aspartate dehydrogenase 98.3 2E-06 6.9E-11 71.4 9.2 101 34-148 10-114 (253)
187 1p77_A Shikimate 5-dehydrogena 98.3 8.3E-07 2.8E-11 74.5 7.0 71 32-103 115-191 (272)
188 3vtf_A UDP-glucose 6-dehydroge 98.3 1.3E-06 4.5E-11 78.2 8.6 109 35-144 20-161 (444)
189 3pwz_A Shikimate dehydrogenase 98.3 1.6E-06 5.4E-11 73.0 8.5 71 31-102 115-191 (272)
190 3ezy_A Dehydrogenase; structur 98.3 1.2E-06 4.2E-11 75.5 7.9 66 37-102 3-74 (344)
191 3g17_A Similar to 2-dehydropan 98.3 1E-07 3.6E-12 80.7 1.1 95 37-133 3-101 (294)
192 3e9m_A Oxidoreductase, GFO/IDH 98.3 1E-06 3.5E-11 75.7 7.2 68 36-103 5-78 (330)
193 3ego_A Probable 2-dehydropanto 98.3 1E-06 3.5E-11 75.2 6.9 106 37-148 3-118 (307)
194 4fgw_A Glycerol-3-phosphate de 98.3 7.3E-07 2.5E-11 78.7 6.1 92 38-131 36-154 (391)
195 3cea_A MYO-inositol 2-dehydrog 98.3 1.7E-06 5.9E-11 74.4 8.3 106 37-148 9-125 (346)
196 1xea_A Oxidoreductase, GFO/IDH 98.3 1.6E-06 5.6E-11 74.1 7.7 107 37-148 3-116 (323)
197 3evn_A Oxidoreductase, GFO/IDH 98.3 2.8E-06 9.6E-11 72.9 8.9 66 37-102 6-77 (329)
198 1iuk_A Hypothetical protein TT 98.3 4.3E-06 1.5E-10 63.3 8.9 104 35-148 12-119 (140)
199 1f06_A MESO-diaminopimelate D- 98.3 3E-06 1E-10 72.8 8.8 102 37-146 4-110 (320)
200 1nyt_A Shikimate 5-dehydrogena 98.3 3.1E-06 1.1E-10 70.9 8.7 97 32-131 115-217 (271)
201 1hyh_A L-hicdh, L-2-hydroxyiso 98.2 2.3E-06 7.9E-11 72.9 7.9 66 37-103 2-80 (309)
202 3jyo_A Quinate/shikimate dehyd 98.2 5.1E-06 1.8E-10 70.2 9.4 71 32-102 123-204 (283)
203 2d59_A Hypothetical protein PH 98.2 7.7E-06 2.6E-10 62.2 9.5 102 36-149 22-127 (144)
204 3fbt_A Chorismate mutase and s 98.2 1.3E-06 4.5E-11 73.9 5.5 96 31-131 117-217 (282)
205 3mz0_A Inositol 2-dehydrogenas 98.2 1.8E-06 6.2E-11 74.5 6.5 66 37-102 3-76 (344)
206 3ec7_A Putative dehydrogenase; 98.2 3.2E-06 1.1E-10 73.5 7.2 68 35-102 22-97 (357)
207 3c1a_A Putative oxidoreductase 98.2 1E-06 3.6E-11 75.1 4.0 106 37-148 11-122 (315)
208 2p2s_A Putative oxidoreductase 98.2 9.1E-06 3.1E-10 69.7 9.9 107 37-148 5-119 (336)
209 3zwc_A Peroxisomal bifunctiona 98.2 2E-05 6.8E-10 74.9 12.8 117 36-156 316-454 (742)
210 1ydw_A AX110P-like protein; st 98.2 5.6E-06 1.9E-10 71.9 8.4 107 37-148 7-124 (362)
211 2qrj_A Saccharopine dehydrogen 98.1 1.7E-06 6E-11 76.1 5.2 84 35-129 213-301 (394)
212 1pzg_A LDH, lactate dehydrogen 98.1 5.1E-06 1.8E-10 71.7 8.0 69 36-104 9-92 (331)
213 3ohs_X Trans-1,2-dihydrobenzen 98.1 3E-06 1E-10 72.8 6.5 66 37-102 3-76 (334)
214 3tnl_A Shikimate dehydrogenase 98.1 1.4E-05 4.9E-10 68.5 10.5 72 31-102 149-236 (315)
215 3f4l_A Putative oxidoreductase 98.1 5.8E-06 2E-10 71.3 8.0 85 37-126 3-94 (345)
216 4fb5_A Probable oxidoreductase 98.1 5.9E-06 2E-10 71.8 7.9 66 37-102 26-104 (393)
217 3bio_A Oxidoreductase, GFO/IDH 98.1 4.7E-06 1.6E-10 71.0 7.1 101 37-146 10-117 (304)
218 3qy9_A DHPR, dihydrodipicolina 98.1 1E-05 3.5E-10 66.9 8.7 82 37-131 4-86 (243)
219 3i23_A Oxidoreductase, GFO/IDH 98.1 1.5E-05 5E-10 69.0 10.1 65 37-102 3-75 (349)
220 2hjr_A Malate dehydrogenase; m 98.1 1.1E-05 3.7E-10 69.6 9.1 64 36-100 14-90 (328)
221 1id1_A Putative potassium chan 98.1 6.6E-06 2.3E-10 62.6 6.8 90 36-127 3-104 (153)
222 1a5z_A L-lactate dehydrogenase 98.1 7.5E-06 2.6E-10 70.2 7.4 94 37-131 1-119 (319)
223 1guz_A Malate dehydrogenase; o 98.1 7.1E-06 2.4E-10 70.1 7.2 65 37-102 1-79 (310)
224 1h6d_A Precursor form of gluco 98.1 8.3E-06 2.8E-10 72.8 7.7 107 37-148 84-203 (433)
225 3l4b_C TRKA K+ channel protien 98.1 7.9E-06 2.7E-10 65.8 7.0 90 37-128 1-99 (218)
226 1nvt_A Shikimate 5'-dehydrogen 98.0 4.5E-06 1.5E-10 70.4 5.4 97 32-131 124-233 (287)
227 3o9z_A Lipopolysaccaride biosy 98.0 2.9E-05 9.8E-10 66.3 10.5 84 37-125 4-100 (312)
228 4had_A Probable oxidoreductase 98.0 7.6E-06 2.6E-10 70.5 6.7 66 37-102 24-96 (350)
229 3e82_A Putative oxidoreductase 98.0 2.2E-05 7.6E-10 68.3 9.6 105 37-148 8-120 (364)
230 3fhl_A Putative oxidoreductase 98.0 1.2E-05 4.2E-10 69.8 7.9 64 37-102 6-75 (362)
231 2dvm_A Malic enzyme, 439AA lon 98.0 1.4E-05 4.8E-10 71.4 8.1 111 31-146 181-312 (439)
232 4gmf_A Yersiniabactin biosynth 98.0 1E-05 3.5E-10 70.9 6.9 110 36-148 7-121 (372)
233 3oa2_A WBPB; oxidoreductase, s 98.0 1.7E-05 5.8E-10 67.9 8.2 66 37-102 4-83 (318)
234 3t4e_A Quinate/shikimate dehyd 98.0 2.4E-05 8.2E-10 67.0 9.0 73 31-103 143-231 (312)
235 3kux_A Putative oxidoreductase 98.0 1.3E-05 4.5E-10 69.3 7.4 67 37-104 8-79 (352)
236 3l9w_A Glutathione-regulated p 98.0 6.9E-06 2.4E-10 73.0 5.6 91 36-128 4-102 (413)
237 1npy_A Hypothetical shikimate 98.0 3E-05 1E-09 65.0 9.2 67 35-103 118-186 (271)
238 3m2t_A Probable dehydrogenase; 98.0 6.9E-06 2.3E-10 71.4 5.4 85 36-125 5-96 (359)
239 1t2d_A LDH-P, L-lactate dehydr 98.0 4.1E-05 1.4E-09 65.8 9.9 64 36-100 4-80 (322)
240 2ef0_A Ornithine carbamoyltran 97.9 0.00014 4.8E-09 61.8 12.8 96 33-128 151-261 (301)
241 3abi_A Putative uncharacterize 97.9 1.3E-05 4.4E-10 69.9 6.4 89 34-128 14-108 (365)
242 4gqa_A NAD binding oxidoreduct 97.9 8.2E-06 2.8E-10 72.0 5.1 66 37-102 27-106 (412)
243 3moi_A Probable dehydrogenase; 97.9 7.8E-06 2.7E-10 71.7 4.9 66 37-102 3-74 (387)
244 1zh8_A Oxidoreductase; TM0312, 97.9 1.2E-05 4.2E-10 69.2 5.9 67 36-102 18-92 (340)
245 2v6b_A L-LDH, L-lactate dehydr 97.9 1.7E-05 5.7E-10 67.6 6.7 112 37-150 1-138 (304)
246 2a9f_A Putative malic enzyme ( 97.9 1.6E-05 5.6E-10 69.8 6.7 158 31-204 183-359 (398)
247 3dfz_A SIRC, precorrin-2 dehyd 97.9 4.3E-05 1.5E-09 62.3 8.7 92 31-129 26-122 (223)
248 3gdo_A Uncharacterized oxidore 97.9 2E-05 7E-10 68.3 7.0 66 37-104 6-77 (358)
249 1lld_A L-lactate dehydrogenase 97.9 3.3E-05 1.1E-09 65.7 8.2 95 35-131 6-127 (319)
250 2ixa_A Alpha-N-acetylgalactosa 97.9 3.7E-05 1.3E-09 68.7 8.8 85 36-125 20-119 (444)
251 4b4u_A Bifunctional protein fo 97.9 4.1E-05 1.4E-09 64.9 8.2 81 30-131 173-254 (303)
252 2nu8_A Succinyl-COA ligase [AD 97.9 4E-05 1.4E-09 64.8 8.0 105 36-148 7-117 (288)
253 2i6t_A Ubiquitin-conjugating e 97.8 2.8E-05 9.7E-10 66.3 7.0 93 36-130 14-127 (303)
254 3two_A Mannitol dehydrogenase; 97.8 4.6E-05 1.6E-09 65.6 8.4 92 35-131 176-268 (348)
255 4f2g_A Otcase 1, ornithine car 97.8 0.00012 4.2E-09 62.4 10.8 96 33-128 151-264 (309)
256 2aef_A Calcium-gated potassium 97.8 2.4E-05 8.2E-10 63.6 6.2 87 35-125 8-102 (234)
257 4h3v_A Oxidoreductase domain p 97.8 1.3E-05 4.4E-10 69.6 4.8 66 37-102 7-85 (390)
258 2nvw_A Galactose/lactose metab 97.8 3.2E-05 1.1E-09 70.0 7.6 66 36-101 39-117 (479)
259 2i6u_A Otcase, ornithine carba 97.8 0.00025 8.5E-09 60.5 12.6 96 33-128 145-265 (307)
260 4ep1_A Otcase, ornithine carba 97.8 0.00019 6.5E-09 61.9 11.9 96 33-128 176-294 (340)
261 3v5n_A Oxidoreductase; structu 97.8 1.8E-05 6.3E-10 70.1 5.6 85 36-125 37-138 (417)
262 1pvv_A Otcase, ornithine carba 97.8 0.00034 1.2E-08 59.9 13.1 96 33-128 152-271 (315)
263 3dty_A Oxidoreductase, GFO/IDH 97.8 1.1E-05 3.8E-10 71.0 3.9 68 36-103 12-96 (398)
264 1pg5_A Aspartate carbamoyltran 97.8 0.00015 5E-09 61.7 10.6 96 33-128 146-260 (299)
265 4ew6_A D-galactose-1-dehydroge 97.8 8.1E-05 2.8E-09 63.9 8.9 61 35-101 24-90 (330)
266 2axq_A Saccharopine dehydrogen 97.8 1.5E-05 5.2E-10 71.9 4.5 93 31-128 18-119 (467)
267 3fef_A Putative glucosidase LP 97.8 1.5E-05 5.1E-10 71.5 4.3 67 35-102 4-85 (450)
268 1jw9_B Molybdopterin biosynthe 97.8 6.1E-06 2.1E-10 68.4 1.3 107 13-127 12-152 (249)
269 1yqd_A Sinapyl alcohol dehydro 97.7 4.3E-05 1.5E-09 66.4 6.6 91 35-130 187-284 (366)
270 1vlv_A Otcase, ornithine carba 97.7 0.00033 1.1E-08 60.2 11.9 96 33-128 164-285 (325)
271 3u3x_A Oxidoreductase; structu 97.7 3.1E-05 1.1E-09 67.3 5.6 66 36-101 26-97 (361)
272 3btv_A Galactose/lactose metab 97.7 2.1E-05 7.2E-10 70.2 4.5 65 37-101 21-98 (438)
273 1ldn_A L-lactate dehydrogenase 97.7 4.5E-05 1.5E-09 65.3 6.3 67 36-102 6-84 (316)
274 2vt3_A REX, redox-sensing tran 97.7 3E-05 1E-09 63.0 4.8 66 36-101 85-154 (215)
275 3gd5_A Otcase, ornithine carba 97.7 0.00037 1.3E-08 59.8 11.8 96 33-128 154-273 (323)
276 1oi7_A Succinyl-COA synthetase 97.7 8.3E-05 2.8E-09 62.9 7.6 105 36-148 7-117 (288)
277 4fcc_A Glutamate dehydrogenase 97.7 0.00015 5.3E-09 64.7 9.6 110 31-148 230-368 (450)
278 3tum_A Shikimate dehydrogenase 97.7 7.8E-05 2.7E-09 62.5 7.4 97 31-127 120-224 (269)
279 1oju_A MDH, malate dehydrogena 97.7 0.0001 3.4E-09 62.6 8.1 96 37-135 1-123 (294)
280 3e8x_A Putative NAD-dependent 97.7 9.9E-05 3.4E-09 59.6 7.5 73 31-103 16-95 (236)
281 1dxh_A Ornithine carbamoyltran 97.7 0.00021 7.2E-09 61.6 9.7 96 33-128 152-274 (335)
282 1ur5_A Malate dehydrogenase; o 97.7 0.00012 4.2E-09 62.4 8.1 64 37-101 3-79 (309)
283 1nvm_B Acetaldehyde dehydrogen 97.7 7E-05 2.4E-09 64.1 6.5 87 37-126 5-102 (312)
284 1uuf_A YAHK, zinc-type alcohol 97.7 6.4E-05 2.2E-09 65.5 6.4 91 35-130 194-290 (369)
285 1y6j_A L-lactate dehydrogenase 97.7 7.6E-05 2.6E-09 64.0 6.7 113 36-150 7-147 (318)
286 1cdo_A Alcohol dehydrogenase; 97.7 0.00019 6.6E-09 62.3 9.4 91 35-130 192-296 (374)
287 3tpf_A Otcase, ornithine carba 97.6 0.00042 1.4E-08 59.1 11.1 96 33-128 142-262 (307)
288 2jhf_A Alcohol dehydrogenase E 97.6 0.00019 6.4E-09 62.4 9.1 90 35-129 191-294 (374)
289 1p0f_A NADP-dependent alcohol 97.6 0.00018 6.3E-09 62.4 9.0 90 35-129 191-294 (373)
290 3oqb_A Oxidoreductase; structu 97.6 0.00013 4.5E-09 63.6 8.1 84 37-125 7-111 (383)
291 1e3i_A Alcohol dehydrogenase, 97.6 0.00021 7.2E-09 62.1 9.4 90 35-129 195-298 (376)
292 1piw_A Hypothetical zinc-type 97.6 6.4E-05 2.2E-09 65.1 5.9 93 35-130 179-278 (360)
293 1ff9_A Saccharopine reductase; 97.6 3.7E-05 1.3E-09 69.0 4.5 69 35-103 2-79 (450)
294 2cdc_A Glucose dehydrogenase g 97.6 4.2E-05 1.5E-09 66.4 4.5 93 33-129 178-279 (366)
295 3gvi_A Malate dehydrogenase; N 97.6 0.00018 6.3E-09 61.8 8.4 96 34-130 5-126 (324)
296 3r7f_A Aspartate carbamoyltran 97.6 0.0002 6.7E-09 61.0 8.4 93 33-128 144-250 (304)
297 1ml4_A Aspartate transcarbamoy 97.6 0.00016 5.6E-09 61.7 7.9 96 33-128 152-268 (308)
298 3nep_X Malate dehydrogenase; h 97.6 0.00023 7.7E-09 61.0 8.8 93 37-129 1-119 (314)
299 4amu_A Ornithine carbamoyltran 97.6 0.00044 1.5E-08 60.2 10.6 97 33-129 177-301 (365)
300 2fzw_A Alcohol dehydrogenase c 97.6 0.0002 7E-09 62.1 8.6 90 35-129 190-293 (373)
301 3ip3_A Oxidoreductase, putativ 97.6 0.00017 5.8E-09 61.9 7.9 64 37-101 3-76 (337)
302 3uko_A Alcohol dehydrogenase c 97.6 0.00019 6.6E-09 62.4 8.3 90 35-129 193-296 (378)
303 3pqe_A L-LDH, L-lactate dehydr 97.6 0.00017 5.9E-09 62.0 7.8 95 35-129 4-123 (326)
304 1duv_G Octase-1, ornithine tra 97.6 0.0002 6.9E-09 61.7 8.1 96 33-128 152-274 (333)
305 4a8t_A Putrescine carbamoyltra 97.6 0.00051 1.7E-08 59.3 10.5 95 33-128 172-292 (339)
306 2czc_A Glyceraldehyde-3-phosph 97.6 0.00018 6.1E-09 62.0 7.7 67 37-103 3-90 (334)
307 3d0o_A L-LDH 1, L-lactate dehy 97.5 9.1E-05 3.1E-09 63.4 5.6 116 35-150 5-147 (317)
308 3ijp_A DHPR, dihydrodipicolina 97.5 0.00018 6.2E-09 60.8 7.3 90 37-131 22-122 (288)
309 1b7g_O Protein (glyceraldehyde 97.5 0.00018 6.2E-09 62.2 7.5 66 38-103 3-88 (340)
310 3sds_A Ornithine carbamoyltran 97.5 0.00077 2.6E-08 58.5 11.2 96 33-128 185-308 (353)
311 3csu_A Protein (aspartate carb 97.5 0.00045 1.5E-08 59.0 9.5 96 33-128 151-267 (310)
312 1obb_A Maltase, alpha-glucosid 97.5 0.00018 6E-09 65.1 7.4 115 36-151 3-174 (480)
313 1e3j_A NADP(H)-dependent ketos 97.5 0.0003 1E-08 60.6 8.6 91 35-130 168-273 (352)
314 2d8a_A PH0655, probable L-thre 97.5 8.8E-05 3E-09 63.8 5.2 90 35-129 167-268 (348)
315 3d6n_B Aspartate carbamoyltran 97.5 0.00034 1.2E-08 59.2 8.6 68 33-101 143-213 (291)
316 3aog_A Glutamate dehydrogenase 97.5 0.00068 2.3E-08 60.5 10.8 109 31-148 230-358 (440)
317 1lc0_A Biliverdin reductase A; 97.5 0.00011 3.8E-09 62.0 5.5 102 37-148 8-118 (294)
318 3upl_A Oxidoreductase; rossman 97.5 0.0002 7E-09 64.0 7.4 108 37-148 24-160 (446)
319 1rjw_A ADH-HT, alcohol dehydro 97.5 0.00012 4.1E-09 62.8 5.7 91 35-130 164-263 (339)
320 2tmg_A Protein (glutamate dehy 97.5 0.0012 4.1E-08 58.5 12.2 109 31-148 204-333 (415)
321 3ldh_A Lactate dehydrogenase; 97.5 7.7E-05 2.6E-09 64.3 4.4 94 35-129 20-139 (330)
322 2dt5_A AT-rich DNA-binding pro 97.5 8.4E-05 2.9E-09 60.1 4.4 65 36-101 80-149 (211)
323 1oth_A Protein (ornithine tran 97.5 0.00084 2.9E-08 57.5 10.8 96 33-128 152-271 (321)
324 3p7m_A Malate dehydrogenase; p 97.5 0.00054 1.9E-08 58.7 9.6 66 35-101 4-82 (321)
325 1pl8_A Human sorbitol dehydrog 97.5 0.0002 6.8E-09 61.8 6.9 91 35-130 171-275 (356)
326 2zqz_A L-LDH, L-lactate dehydr 97.5 0.0001 3.4E-09 63.5 4.9 94 35-129 8-126 (326)
327 2w37_A Ornithine carbamoyltran 97.5 0.00054 1.8E-08 59.5 9.5 97 33-129 173-296 (359)
328 4a8p_A Putrescine carbamoyltra 97.5 0.00066 2.3E-08 58.9 9.9 95 33-128 150-270 (355)
329 4f3y_A DHPR, dihydrodipicolina 97.5 0.00019 6.4E-09 60.3 6.3 91 36-131 7-107 (272)
330 1iz0_A Quinone oxidoreductase; 97.5 0.00015 5.2E-09 61.1 5.8 88 35-129 125-219 (302)
331 3ip1_A Alcohol dehydrogenase, 97.4 0.00036 1.2E-08 61.3 8.3 92 34-129 212-319 (404)
332 4a7p_A UDP-glucose dehydrogena 97.4 0.00044 1.5E-08 62.0 8.9 101 32-138 318-430 (446)
333 2cf5_A Atccad5, CAD, cinnamyl 97.4 0.00016 5.4E-09 62.6 5.8 90 35-129 180-276 (357)
334 3vku_A L-LDH, L-lactate dehydr 97.4 0.00034 1.2E-08 60.1 7.9 96 34-129 7-126 (326)
335 1ez4_A Lactate dehydrogenase; 97.4 0.00013 4.5E-09 62.5 5.1 114 37-150 6-145 (318)
336 2fp4_A Succinyl-COA ligase [GD 97.4 0.00029 1E-08 60.0 7.2 108 33-148 10-125 (305)
337 3do5_A HOM, homoserine dehydro 97.4 0.00032 1.1E-08 60.4 7.4 111 37-148 3-136 (327)
338 4ej6_A Putative zinc-binding d 97.4 0.00015 5.1E-09 63.1 5.4 90 35-129 182-285 (370)
339 3qvo_A NMRA family protein; st 97.4 0.00014 4.7E-09 58.9 4.9 97 34-132 21-128 (236)
340 3grf_A Ornithine carbamoyltran 97.4 0.0015 5.2E-08 56.1 11.3 96 33-128 158-283 (328)
341 2hcy_A Alcohol dehydrogenase 1 97.4 0.00032 1.1E-08 60.2 7.2 91 35-130 169-271 (347)
342 3s2e_A Zinc-containing alcohol 97.4 0.00014 4.6E-09 62.4 4.8 90 35-129 166-264 (340)
343 1u8x_X Maltose-6'-phosphate gl 97.4 0.0001 3.5E-09 66.5 3.9 115 36-150 28-193 (472)
344 3uog_A Alcohol dehydrogenase; 97.4 0.00023 7.9E-09 61.6 6.0 89 35-129 189-288 (363)
345 3q2o_A Phosphoribosylaminoimid 97.4 0.00021 7.2E-09 62.4 5.7 67 33-99 11-82 (389)
346 2yfq_A Padgh, NAD-GDH, NAD-spe 97.3 0.00036 1.2E-08 62.0 7.1 109 31-148 207-340 (421)
347 2h6e_A ADH-4, D-arabinose 1-de 97.3 0.00014 4.9E-09 62.4 4.3 90 35-129 170-270 (344)
348 1mld_A Malate dehydrogenase; o 97.3 0.00079 2.7E-08 57.5 8.8 64 37-101 1-77 (314)
349 1lnq_A MTHK channels, potassiu 97.3 0.0003 1E-08 60.3 6.1 87 36-126 115-209 (336)
350 3r6d_A NAD-dependent epimerase 97.3 0.0005 1.7E-08 54.8 7.0 91 37-131 6-110 (221)
351 4ina_A Saccharopine dehydrogen 97.3 0.00018 6.1E-09 63.6 4.8 89 37-130 2-109 (405)
352 2yv1_A Succinyl-COA ligase [AD 97.3 0.0003 1E-08 59.6 5.9 104 37-148 14-123 (294)
353 3ff4_A Uncharacterized protein 97.3 0.00058 2E-08 50.4 6.7 99 37-148 5-107 (122)
354 2bma_A Glutamate dehydrogenase 97.3 0.0014 4.7E-08 58.9 10.2 110 31-148 247-386 (470)
355 3gg2_A Sugar dehydrogenase, UD 97.3 0.0013 4.4E-08 58.9 10.1 92 32-127 314-418 (450)
356 1ys4_A Aspartate-semialdehyde 97.3 0.00056 1.9E-08 59.3 7.6 89 37-130 9-116 (354)
357 1cf2_P Protein (glyceraldehyde 97.3 0.00024 8.1E-09 61.4 5.1 67 37-103 2-89 (337)
358 3fpc_A NADP-dependent alcohol 97.3 0.0003 1E-08 60.6 5.5 90 35-129 166-267 (352)
359 3lk7_A UDP-N-acetylmuramoylala 97.3 0.00029 9.9E-09 63.0 5.6 114 33-146 6-138 (451)
360 1lu9_A Methylene tetrahydromet 97.3 0.00029 9.9E-09 59.1 5.2 38 32-69 115-153 (287)
361 1f8f_A Benzyl alcohol dehydrog 97.3 0.00023 7.7E-09 61.8 4.7 90 35-129 190-290 (371)
362 3aoe_E Glutamate dehydrogenase 97.3 0.0035 1.2E-07 55.6 12.4 109 31-148 213-337 (419)
363 3h2s_A Putative NADH-flavin re 97.3 0.0013 4.6E-08 52.1 8.9 93 37-129 1-105 (224)
364 2nqt_A N-acetyl-gamma-glutamyl 97.2 0.00086 2.9E-08 58.2 8.1 94 36-137 9-119 (352)
365 3tl2_A Malate dehydrogenase; c 97.2 0.00046 1.6E-08 59.1 6.3 94 35-129 7-128 (315)
366 2q3e_A UDP-glucose 6-dehydroge 97.2 0.0016 5.3E-08 58.6 10.0 97 33-131 326-445 (467)
367 3eag_A UDP-N-acetylmuramate:L- 97.2 0.00095 3.2E-08 57.1 8.2 111 36-146 4-134 (326)
368 4eye_A Probable oxidoreductase 97.2 0.00048 1.6E-08 59.1 6.4 89 35-129 159-258 (342)
369 1js1_X Transcarbamylase; alpha 97.2 0.0022 7.7E-08 54.9 10.4 93 33-127 166-274 (324)
370 1v9l_A Glutamate dehydrogenase 97.2 0.0022 7.5E-08 56.9 10.7 110 31-148 205-339 (421)
371 1xyg_A Putative N-acetyl-gamma 97.2 0.0019 6.6E-08 56.1 10.2 90 35-131 15-115 (359)
372 4ekn_B Aspartate carbamoyltran 97.2 0.0023 8E-08 54.4 10.3 93 33-127 148-262 (306)
373 1pqw_A Polyketide synthase; ro 97.2 0.00023 7.9E-09 56.0 3.9 89 35-129 38-138 (198)
374 1kyq_A Met8P, siroheme biosynt 97.2 0.00023 7.9E-09 59.8 3.9 39 31-69 8-46 (274)
375 3gms_A Putative NADPH:quinone 97.2 0.00059 2E-08 58.4 6.5 89 35-129 144-244 (340)
376 3keo_A Redox-sensing transcrip 97.2 0.00026 9E-09 57.2 4.0 67 36-102 84-158 (212)
377 2d4a_B Malate dehydrogenase; a 97.2 0.00043 1.5E-08 59.0 5.6 64 38-102 1-77 (308)
378 3qwb_A Probable quinone oxidor 97.2 0.0017 5.8E-08 55.3 9.4 89 35-129 148-248 (334)
379 1zud_1 Adenylyltransferase THI 97.2 0.00025 8.6E-09 58.6 4.0 107 14-128 10-150 (251)
380 3goh_A Alcohol dehydrogenase, 97.2 0.00036 1.2E-08 59.1 5.0 87 35-128 142-229 (315)
381 3tqh_A Quinone oxidoreductase; 97.2 0.00045 1.5E-08 58.7 5.6 88 35-129 152-246 (321)
382 2we8_A Xanthine dehydrogenase; 97.2 0.0012 4.3E-08 57.9 8.5 96 36-151 204-302 (386)
383 2yyy_A Glyceraldehyde-3-phosph 97.2 0.00093 3.2E-08 57.8 7.6 87 37-128 3-113 (343)
384 2xxj_A L-LDH, L-lactate dehydr 97.2 0.00052 1.8E-08 58.5 5.9 92 37-129 1-117 (310)
385 1v3u_A Leukotriene B4 12- hydr 97.2 0.00042 1.4E-08 59.0 5.3 89 35-129 145-245 (333)
386 2ozp_A N-acetyl-gamma-glutamyl 97.2 0.002 7E-08 55.7 9.7 89 37-131 5-102 (345)
387 3ew7_A LMO0794 protein; Q8Y8U8 97.2 0.0018 6.1E-08 51.1 8.7 93 37-130 1-104 (221)
388 1pjq_A CYSG, siroheme synthase 97.1 0.00084 2.9E-08 60.2 7.4 72 32-105 8-84 (457)
389 3ius_A Uncharacterized conserv 97.1 0.00077 2.6E-08 55.6 6.7 65 36-102 5-73 (286)
390 2b5w_A Glucose dehydrogenase; 97.1 0.0005 1.7E-08 59.3 5.7 90 35-129 172-274 (357)
391 3fbg_A Putative arginate lyase 97.1 0.00043 1.5E-08 59.5 5.2 89 35-128 150-248 (346)
392 3orq_A N5-carboxyaminoimidazol 97.1 0.00076 2.6E-08 58.8 6.8 66 33-98 9-79 (377)
393 1s6y_A 6-phospho-beta-glucosid 97.1 0.00031 1.1E-08 63.0 4.4 67 36-102 7-93 (450)
394 1dih_A Dihydrodipicolinate red 97.1 0.00046 1.6E-08 57.9 5.1 89 37-130 6-105 (273)
395 3k92_A NAD-GDH, NAD-specific g 97.1 0.0023 7.9E-08 56.8 9.8 109 31-148 216-343 (424)
396 4aj2_A L-lactate dehydrogenase 97.1 0.00099 3.4E-08 57.4 7.3 97 33-130 16-138 (331)
397 1vj0_A Alcohol dehydrogenase, 97.1 0.00054 1.8E-08 59.7 5.7 90 35-129 195-299 (380)
398 4g65_A TRK system potassium up 97.1 0.00043 1.5E-08 62.2 5.2 69 35-103 2-79 (461)
399 2yv2_A Succinyl-COA synthetase 97.1 0.00079 2.7E-08 57.1 6.3 105 36-148 13-124 (297)
400 1zq6_A Otcase, ornithine carba 97.1 0.0056 1.9E-07 53.2 11.7 94 34-128 188-315 (359)
401 4a0s_A Octenoyl-COA reductase/ 97.1 0.001 3.6E-08 59.0 7.4 90 34-129 219-337 (447)
402 2dq4_A L-threonine 3-dehydroge 97.1 0.00037 1.3E-08 59.8 4.2 89 35-129 164-263 (343)
403 3c8m_A Homoserine dehydrogenas 97.1 0.00059 2E-08 58.7 5.5 111 37-148 7-142 (331)
404 1smk_A Malate dehydrogenase, g 97.1 0.00083 2.8E-08 57.6 6.4 65 36-101 8-85 (326)
405 1hdo_A Biliverdin IX beta redu 97.1 0.00055 1.9E-08 53.4 4.9 67 36-102 3-77 (206)
406 3fi9_A Malate dehydrogenase; s 97.1 0.00065 2.2E-08 58.8 5.7 68 34-101 6-85 (343)
407 4b7c_A Probable oxidoreductase 97.1 0.00048 1.7E-08 58.8 4.7 90 35-130 149-250 (336)
408 3cps_A Glyceraldehyde 3-phosph 97.1 0.0015 5E-08 56.8 7.8 88 37-129 18-139 (354)
409 2yfk_A Aspartate/ornithine car 97.0 0.0015 5E-08 57.9 7.7 67 34-100 186-271 (418)
410 4dup_A Quinone oxidoreductase; 97.0 0.00064 2.2E-08 58.6 5.3 89 35-129 167-266 (353)
411 1p9l_A Dihydrodipicolinate red 97.0 0.0025 8.7E-08 52.5 8.7 74 37-130 1-78 (245)
412 1bgv_A Glutamate dehydrogenase 97.0 0.0041 1.4E-07 55.6 10.5 111 31-148 225-365 (449)
413 3mw9_A GDH 1, glutamate dehydr 97.0 0.0056 1.9E-07 55.2 11.3 106 33-148 241-366 (501)
414 3jyn_A Quinone oxidoreductase; 97.0 0.00081 2.8E-08 57.2 5.7 89 35-129 140-240 (325)
415 1u8f_O GAPDH, glyceraldehyde-3 97.0 0.0019 6.6E-08 55.6 8.0 89 37-130 4-124 (335)
416 2dph_A Formaldehyde dismutase; 97.0 0.00047 1.6E-08 60.4 4.2 96 35-130 185-301 (398)
417 3g79_A NDP-N-acetyl-D-galactos 97.0 0.0022 7.5E-08 57.9 8.5 100 31-138 348-458 (478)
418 3m6i_A L-arabinitol 4-dehydrog 97.0 0.0019 6.6E-08 55.6 7.8 90 35-129 179-284 (363)
419 2c0c_A Zinc binding alcohol de 97.0 0.00053 1.8E-08 59.4 4.1 89 35-129 163-262 (362)
420 2ph5_A Homospermidine synthase 97.0 0.0014 4.7E-08 59.0 6.9 37 33-70 11-51 (480)
421 3k31_A Enoyl-(acyl-carrier-pro 97.0 0.0016 5.4E-08 54.7 7.0 39 31-69 25-66 (296)
422 2ejw_A HDH, homoserine dehydro 97.0 0.00046 1.6E-08 59.5 3.7 101 37-145 4-116 (332)
423 2j3h_A NADP-dependent oxidored 97.0 0.00064 2.2E-08 58.1 4.5 89 35-129 155-256 (345)
424 3pi7_A NADH oxidoreductase; gr 96.9 0.0027 9.1E-08 54.5 8.4 88 36-129 165-264 (349)
425 1ebf_A Homoserine dehydrogenas 96.9 0.00065 2.2E-08 59.1 4.5 90 37-133 5-120 (358)
426 4dvj_A Putative zinc-dependent 96.9 0.0019 6.4E-08 55.9 7.5 89 35-128 171-270 (363)
427 3dhn_A NAD-dependent epimerase 96.9 0.0016 5.3E-08 51.9 6.5 66 37-102 5-77 (227)
428 3q98_A Transcarbamylase; rossm 96.9 0.005 1.7E-07 54.2 9.9 68 33-100 188-274 (399)
429 2y0c_A BCEC, UDP-glucose dehyd 96.9 0.0052 1.8E-07 55.4 10.3 99 32-136 324-445 (478)
430 3r3j_A Glutamate dehydrogenase 96.9 0.0039 1.3E-07 55.7 9.2 110 31-148 234-373 (456)
431 2bka_A CC3, TAT-interacting pr 96.9 0.0015 5.3E-08 52.4 6.1 70 34-103 16-95 (242)
432 2ep5_A 350AA long hypothetical 96.9 0.0016 5.5E-08 56.4 6.4 88 37-130 5-110 (350)
433 4a2c_A Galactitol-1-phosphate 96.9 0.0023 7.9E-08 54.6 7.3 91 34-129 159-261 (346)
434 2vn8_A Reticulon-4-interacting 96.9 0.0031 1.1E-07 54.6 8.2 91 35-130 183-282 (375)
435 3e5r_O PP38, glyceraldehyde-3- 96.9 0.0014 4.9E-08 56.5 6.0 30 37-66 4-34 (337)
436 1kol_A Formaldehyde dehydrogen 96.8 0.0012 4E-08 57.8 5.4 95 35-129 185-301 (398)
437 3jv7_A ADH-A; dehydrogenase, n 96.8 0.00096 3.3E-08 57.1 4.7 90 35-129 171-271 (345)
438 2pzm_A Putative nucleotide sug 96.8 0.0011 3.9E-08 56.0 5.1 73 30-102 14-98 (330)
439 1jvb_A NAD(H)-dependent alcoho 96.8 0.00093 3.2E-08 57.3 4.6 90 35-129 170-272 (347)
440 3oig_A Enoyl-[acyl-carrier-pro 96.8 0.0041 1.4E-07 50.9 8.3 37 33-69 4-43 (266)
441 3nx4_A Putative oxidoreductase 96.8 0.0014 4.7E-08 55.6 5.5 87 36-129 148-242 (324)
442 2o3j_A UDP-glucose 6-dehydroge 96.8 0.0053 1.8E-07 55.4 9.6 104 33-139 332-456 (481)
443 1gu7_A Enoyl-[acyl-carrier-pro 96.8 0.0039 1.3E-07 53.6 8.4 89 35-129 166-276 (364)
444 3gqv_A Enoyl reductase; medium 96.8 0.0047 1.6E-07 53.5 8.9 89 34-128 163-263 (371)
445 2rir_A Dipicolinate synthase, 96.8 0.0039 1.3E-07 52.5 8.2 108 34-149 5-122 (300)
446 3dqp_A Oxidoreductase YLBE; al 96.8 0.001 3.5E-08 52.9 4.3 67 37-103 1-74 (219)
447 3dr3_A N-acetyl-gamma-glutamyl 96.8 0.0018 6.3E-08 55.8 6.2 91 37-133 5-111 (337)
448 4h31_A Otcase, ornithine carba 96.8 0.0089 3E-07 51.9 10.5 97 32-128 177-300 (358)
449 3gpi_A NAD-dependent epimerase 96.8 0.0011 3.8E-08 54.8 4.7 67 35-101 2-72 (286)
450 3nv9_A Malic enzyme; rossmann 96.8 0.0099 3.4E-07 53.1 10.8 99 31-132 214-331 (487)
451 3e48_A Putative nucleoside-dip 96.8 0.0024 8.2E-08 52.7 6.5 66 37-102 1-75 (289)
452 3mtj_A Homoserine dehydrogenas 96.8 0.0025 8.7E-08 56.9 7.0 106 37-148 11-131 (444)
453 3on5_A BH1974 protein; structu 96.8 0.0019 6.5E-08 56.2 6.0 133 37-205 200-345 (362)
454 3krt_A Crotonyl COA reductase; 96.8 0.00085 2.9E-08 59.9 3.9 88 35-128 228-344 (456)
455 3ijr_A Oxidoreductase, short c 96.8 0.0051 1.7E-07 51.4 8.5 38 32-69 43-81 (291)
456 3i6i_A Putative leucoanthocyan 96.8 0.0046 1.6E-07 52.6 8.3 68 34-101 8-92 (346)
457 4e4t_A Phosphoribosylaminoimid 96.8 0.002 6.9E-08 57.0 6.2 66 33-98 32-102 (419)
458 1vkn_A N-acetyl-gamma-glutamyl 96.8 0.0074 2.5E-07 52.3 9.6 93 35-135 12-114 (351)
459 1qor_A Quinone oxidoreductase; 96.7 0.0014 4.7E-08 55.7 4.9 89 35-129 140-240 (327)
460 1tt7_A YHFP; alcohol dehydroge 96.7 0.002 6.8E-08 54.7 5.9 86 38-129 153-248 (330)
461 2eih_A Alcohol dehydrogenase; 96.7 0.0015 5.1E-08 55.9 5.1 89 35-129 166-266 (343)
462 3h8v_A Ubiquitin-like modifier 96.7 0.002 6.8E-08 54.5 5.8 38 32-69 32-70 (292)
463 3gaz_A Alcohol dehydrogenase s 96.7 0.0012 4.2E-08 56.5 4.6 89 35-130 150-248 (343)
464 2pd4_A Enoyl-[acyl-carrier-pro 96.7 0.0022 7.7E-08 53.0 6.0 38 33-70 3-43 (275)
465 1xgk_A Nitrogen metabolite rep 96.7 0.0018 6.2E-08 55.7 5.6 97 35-131 4-115 (352)
466 2x5o_A UDP-N-acetylmuramoylala 96.7 0.0018 6.1E-08 57.6 5.5 112 33-145 2-129 (439)
467 2j8z_A Quinone oxidoreductase; 96.7 0.0019 6.4E-08 55.7 5.5 89 35-129 162-262 (354)
468 2zcu_A Uncharacterized oxidore 96.7 0.0015 5E-08 53.8 4.6 64 38-101 1-74 (286)
469 2r00_A Aspartate-semialdehyde 96.7 0.0011 3.7E-08 57.2 3.9 88 37-130 4-98 (336)
470 3ojo_A CAP5O; rossmann fold, c 96.7 0.0058 2E-07 54.4 8.5 84 33-127 312-406 (431)
471 1o6z_A MDH, malate dehydrogena 96.6 0.0053 1.8E-07 52.0 7.7 65 37-101 1-79 (303)
472 1xa0_A Putative NADPH dependen 96.6 0.0017 5.9E-08 55.1 4.6 86 38-129 152-247 (328)
473 3grk_A Enoyl-(acyl-carrier-pro 96.6 0.0034 1.2E-07 52.6 6.3 38 32-69 27-67 (293)
474 1wly_A CAAR, 2-haloacrylate re 96.6 0.0018 6.3E-08 55.1 4.7 88 35-128 145-244 (333)
475 4id9_A Short-chain dehydrogena 96.6 0.0013 4.4E-08 55.8 3.7 72 31-102 14-87 (347)
476 1yb5_A Quinone oxidoreductase; 96.6 0.0019 6.6E-08 55.6 4.7 88 35-128 170-269 (351)
477 1hdg_O Holo-D-glyceraldehyde-3 96.6 0.0022 7.4E-08 55.3 5.0 31 37-67 1-34 (332)
478 2gas_A Isoflavone reductase; N 96.6 0.0036 1.2E-07 52.0 6.2 67 36-102 2-86 (307)
479 1y1p_A ARII, aldehyde reductas 96.6 0.0027 9.3E-08 53.4 5.5 69 33-101 8-92 (342)
480 1b8p_A Protein (malate dehydro 96.6 0.0048 1.6E-07 52.8 7.0 66 36-101 5-92 (329)
481 1zsy_A Mitochondrial 2-enoyl t 96.5 0.012 4E-07 50.6 9.5 88 35-128 167-270 (357)
482 3b1j_A Glyceraldehyde 3-phosph 96.5 0.0027 9.2E-08 54.8 5.3 30 37-66 3-35 (339)
483 3rui_A Ubiquitin-like modifier 96.5 0.003 1E-07 54.5 5.5 93 32-128 30-171 (340)
484 2x4g_A Nucleoside-diphosphate- 96.5 0.0064 2.2E-07 51.2 7.6 66 36-101 13-86 (342)
485 2zb4_A Prostaglandin reductase 96.5 0.0027 9.2E-08 54.6 5.2 89 35-129 158-261 (357)
486 2p91_A Enoyl-[acyl-carrier-pro 96.5 0.0062 2.1E-07 50.5 7.2 37 33-69 18-57 (285)
487 3nrc_A Enoyl-[acyl-carrier-pro 96.5 0.019 6.5E-07 47.4 10.2 39 31-69 21-62 (280)
488 3vh1_A Ubiquitin-like modifier 96.5 0.0016 5.4E-08 60.2 3.7 37 32-68 323-360 (598)
489 2jl1_A Triphenylmethane reduct 96.5 0.0036 1.2E-07 51.5 5.7 66 37-102 1-76 (287)
490 2ydy_A Methionine adenosyltran 96.5 0.0034 1.2E-07 52.4 5.6 65 36-101 2-69 (315)
491 3hn7_A UDP-N-acetylmuramate-L- 96.5 0.0073 2.5E-07 55.0 8.1 113 34-146 17-148 (524)
492 2r6j_A Eugenol synthase 1; phe 96.5 0.0092 3.1E-07 49.9 8.2 65 37-101 12-88 (318)
493 4fs3_A Enoyl-[acyl-carrier-pro 96.5 0.0072 2.5E-07 49.6 7.3 38 32-69 2-42 (256)
494 3pxx_A Carveol dehydrogenase; 96.5 0.0077 2.6E-07 49.7 7.5 38 31-68 5-43 (287)
495 2dkn_A 3-alpha-hydroxysteroid 96.5 0.0023 7.9E-08 51.5 4.2 65 37-101 2-71 (255)
496 1gad_O D-glyceraldehyde-3-phos 96.5 0.0051 1.7E-07 52.9 6.5 30 38-67 3-33 (330)
497 3m2p_A UDP-N-acetylglucosamine 96.4 0.0055 1.9E-07 51.2 6.6 65 36-102 2-72 (311)
498 2wyu_A Enoyl-[acyl carrier pro 96.4 0.0022 7.4E-08 52.6 4.0 37 33-69 5-44 (261)
499 2a4k_A 3-oxoacyl-[acyl carrier 96.4 0.0047 1.6E-07 50.8 6.0 37 33-69 3-40 (263)
500 3ing_A Homoserine dehydrogenas 96.4 0.0062 2.1E-07 52.2 6.9 110 37-148 5-138 (325)
No 1
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=100.00 E-value=1.6e-56 Score=392.61 Aligned_cols=223 Identities=83% Similarity=1.388 Sum_probs=210.8
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCC
Q 027408 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA 80 (223)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 80 (223)
++||++.|++..+++.+++|.|........+.+|.|++|||||+|.||+.+|+++++||++|++|||++...+.+...|+
T Consensus 129 ~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~ 208 (351)
T 3jtm_A 129 MRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGA 208 (351)
T ss_dssp HHHHHHHHTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCC
T ss_pred HHHHHHhhCcHHHHHHHHcCCCccccccCCcccccCCEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCC
Confidence 57999999999999999999998543223467999999999999999999999999999999999998766677777888
Q ss_pred eecCCHHhhcccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCCCCC
Q 027408 81 KFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPA 160 (223)
Q Consensus 81 ~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~ep~ 160 (223)
..++++++++++||+|++|+|++++|+++++++.++.||+|++|||++||+++|+++|+++|++|+|.||+||||++||+
T Consensus 209 ~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~EP~ 288 (351)
T 3jtm_A 209 KFVEDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNARGAIMERQAVVDAVESGHIGGYSGDVWDPQPA 288 (351)
T ss_dssp EECSCHHHHGGGCSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSC
T ss_pred eEcCCHHHHHhcCCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECcCchhhCHHHHHHHHHhCCccEEEeCCCCCCCC
Confidence 87789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCeEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCcceeccCCCcCCCCC
Q 027408 161 PKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVKAGELAPQYR 223 (223)
Q Consensus 161 ~~~~~l~~~~nv~~tPH~a~~t~~~~~~~~~~~~~~i~~~~~g~~~~~~n~~~~~~~~~~~~~ 223 (223)
+.++|||.+|||++|||+|++|.+++.++...+.+|+.+|++|++..+.|+|+.+|+++++||
T Consensus 289 ~~~~pL~~~~nvilTPHia~~t~ea~~~~~~~~~~nl~~~~~g~~~~~~~~i~~~~~~~~~~~ 351 (351)
T 3jtm_A 289 PKDHPWRYMPNQAMTPHTSGTTIDAQLRYAAGTKDMLERYFKGEDFPTENYIVKDGELAPQYR 351 (351)
T ss_dssp CTTCGGGTSTTBCCCCSCGGGSHHHHHHHHHHHHHHHHHHHHTCCCCGGGEEEETTEECGGGC
T ss_pred CCCChhhcCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCCceEEecCCccccccC
Confidence 999999999999999999999999999999999999999999998889999999999999997
No 2
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=100.00 E-value=1.5e-52 Score=366.43 Aligned_cols=208 Identities=27% Similarity=0.493 Sum_probs=190.5
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCc-ccCcccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhC
Q 027408 1 MRILILVRNFLPGHHQVISGEWNVAG-VAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETG 79 (223)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~~~w~~~~-~~~~~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g 79 (223)
++||++.|++..+++.+++|.|.... ....+.+|.|++|||||+|.||+.+|+++++||++|++|||++...+... +
T Consensus 137 ~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~--g 214 (345)
T 4g2n_A 137 LLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALEE--G 214 (345)
T ss_dssp HHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHT--T
T ss_pred HHHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhhc--C
Confidence 47999999999999999999997532 22347899999999999999999999999999999999999865444332 6
Q ss_pred CeecCCHHhhcccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCCCC
Q 027408 80 AKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQP 159 (223)
Q Consensus 80 ~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~ep 159 (223)
+.+.+++++++++||+|++|+|++++|+++++++.++.||+|++|||+|||+++|++||+++|++|+|.||+||||++||
T Consensus 215 ~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~LDVf~~EP 294 (345)
T 4g2n_A 215 AIYHDTLDSLLGASDIFLIAAPGRPELKGFLDHDRIAKIPEGAVVINISRGDLINDDALIEALRSKHLFAAGLDVFANEP 294 (345)
T ss_dssp CEECSSHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTT
T ss_pred CeEeCCHHHHHhhCCEEEEecCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCceEEEecCCCCCC
Confidence 77767999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccCCCCeEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCcceec
Q 027408 160 APKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIV 213 (223)
Q Consensus 160 ~~~~~~l~~~~nv~~tPH~a~~t~~~~~~~~~~~~~~i~~~~~g~~~~~~n~~~ 213 (223)
+.++|||.+|||++|||+|++|.++++++...+++||.+|++|+++ .|.|+
T Consensus 295 -~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~l~g~~~--~~~V~ 345 (345)
T 4g2n_A 295 -AIDPRYRSLDNIFLTPHIGSATHETRDAMGWLLIQGIEALNQSDVP--DNLIS 345 (345)
T ss_dssp -SCCTTGGGCTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHTTCCC--TTBCC
T ss_pred -CCCchHHhCCCEEEcCccCcCCHHHHHHHHHHHHHHHHHHHcCCCC--CCCcC
Confidence 7889999999999999999999999999999999999999999974 55553
No 3
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=100.00 E-value=1.3e-53 Score=372.18 Aligned_cols=209 Identities=28% Similarity=0.400 Sum_probs=188.9
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCC
Q 027408 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA 80 (223)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 80 (223)
++||++.|++...++.++++.|.... ...+.+|.|+++||||+|+||+.+|+++++|||+|++||+... +.....++
T Consensus 107 ~l~L~~~r~~~~~~~~~~~~~~~~~~-~~~~~~l~g~tvGIiG~G~IG~~va~~~~~fg~~v~~~d~~~~--~~~~~~~~ 183 (334)
T 3kb6_A 107 AMILTLVKRLKRIEDRVKKLNFSQDS-EILARELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKR--EDLKEKGC 183 (334)
T ss_dssp HHHHHHHTTHHHHHHHHHTTCCCCCG-GGCBCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHTTC
T ss_pred HHHHHHhhcccccccccccccccccc-ccccceecCcEEEEECcchHHHHHHHhhcccCceeeecCCccc--hhhhhcCc
Confidence 47899999999999999999987543 2357899999999999999999999999999999999998653 23344556
Q ss_pred eecCCHHhhcccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCCCCC
Q 027408 81 KFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPA 160 (223)
Q Consensus 81 ~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~ep~ 160 (223)
.. .++++++++||+|++|+|+|++|+++|+++.|+.||+|++|||+|||++||++||+++|++|+|.||+||||++||+
T Consensus 184 ~~-~~l~ell~~sDivslh~Plt~~T~~li~~~~l~~mk~~a~lIN~aRG~iVde~aL~~aL~~g~i~gA~LDV~~~EPl 262 (334)
T 3kb6_A 184 VY-TSLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEEI 262 (334)
T ss_dssp EE-CCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHHH
T ss_pred ee-cCHHHHHhhCCEEEEcCCCChhhccCcCHHHHhhcCCCeEEEecCccccccHHHHHHHHHhCCceEEEEeCCCCCCC
Confidence 55 58999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCC---------------CccCCCCeEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCC-CCcceec
Q 027408 161 PKDH---------------PWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDF-PVQNYIV 213 (223)
Q Consensus 161 ~~~~---------------~l~~~~nv~~tPH~a~~t~~~~~~~~~~~~~~i~~~~~g~~~-~~~n~~~ 213 (223)
+.++ |||.+|||++|||+||+|.|+++++...+++||.+|++|++. .+.|.|+
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~L~~~~nvilTPHia~~T~ea~~~~~~~~~~ni~~~l~Ge~~~~~~n~v~ 331 (334)
T 3kb6_A 263 LILKKYTEGKATDKNLKILELACKDNVIITPHIAYYTDKSLERIREETVKVVKAFVKGDLEQIKGNFVV 331 (334)
T ss_dssp HHTTGGGGTCCCHHHHHHHHHHTSTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHHTCGGGGGGGEEE
T ss_pred cccccccccccccccccchhhccCCCEEECCchhhChHHHHHHHHHHHHHHHHHHHcCCCCcCCCCcCC
Confidence 7666 578899999999999999999999999999999999999976 3566664
No 4
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=100.00 E-value=1.5e-52 Score=369.51 Aligned_cols=221 Identities=49% Similarity=0.886 Sum_probs=202.2
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEcccHHHHHHHHHHccCCCe-EEEEcCCCCChhHHHhhC
Q 027408 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCN-LLYHDRVKMDPQLEKETG 79 (223)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~-V~~~d~~~~~~~~~~~~g 79 (223)
++||++.|++..+++.+++|.|........+.+|.|++|||||+|+||+.+|+++++||++ |++||+++...+.+...|
T Consensus 129 ~~~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g 208 (364)
T 2j6i_A 129 MTMLVLVRNFVPAHEQIINHDWEVAAIAKDAYDIEGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVG 208 (364)
T ss_dssp HHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTT
T ss_pred HHHHHHHhChHHHHHHHHhCCCCcCcccCCcccCCCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcC
Confidence 4799999999999999999999743222246799999999999999999999999999997 999999876666666778
Q ss_pred CeecCCHHhhcccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCCCC
Q 027408 80 AKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQP 159 (223)
Q Consensus 80 ~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~ep 159 (223)
+....++++++++||+|++|+|++++|+++++++.++.||++++|||++||+++|+++|+++|++|+|.||+||||++||
T Consensus 209 ~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIn~arG~~vd~~aL~~aL~~g~i~gA~LDVf~~EP 288 (364)
T 2j6i_A 209 ARRVENIEELVAQADIVTVNAPLHAGTKGLINKELLSKFKKGAWLVNTARGAICVAEDVAAALESGQLRGYGGDVWFPQP 288 (364)
T ss_dssp EEECSSHHHHHHTCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSS
T ss_pred cEecCCHHHHHhcCCEEEECCCCChHHHHHhCHHHHhhCCCCCEEEECCCCchhCHHHHHHHHHcCCCcEEEEecCCCCC
Confidence 77667899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccCC--C---CeEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCC-CCCCcceeccCCCcCCC
Q 027408 160 APKDHPWRYM--P---NQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGE-DFPVQNYIVKAGELAPQ 221 (223)
Q Consensus 160 ~~~~~~l~~~--~---nv~~tPH~a~~t~~~~~~~~~~~~~~i~~~~~g~-~~~~~n~~~~~~~~~~~ 221 (223)
++.++|||.+ | ||++|||+|++|.++..++...+.+|+.+|++|+ |.++.|.|+.+++|.++
T Consensus 289 ~~~~~pL~~~~~~~~~nvilTPHia~~t~e~~~~~~~~~~~nl~~~~~g~~~~~~~n~v~~~~~y~~~ 356 (364)
T 2j6i_A 289 APKDHPWRDMRNKYGAGNAMTPHYSGTTLDAQTRYAQGTVNILESFFTGKFDYRPQDIILLNGEYGTK 356 (364)
T ss_dssp CCTTCHHHHCCCTTSCCEEECCSCGGGSHHHHHHHHHHHHHHHHHHHTTCCCCCGGGEEEBTTBC---
T ss_pred CCCCChHHhccCCccCcEEECCccCcCCHHHHHHHHHHHHHHHHHHHcCCCCCCCCceecCCcCcchh
Confidence 9999999999 9 9999999999999999999999999999999998 45889999999999886
No 5
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=100.00 E-value=1.6e-51 Score=358.67 Aligned_cols=211 Identities=25% Similarity=0.409 Sum_probs=194.1
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCC
Q 027408 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA 80 (223)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 80 (223)
++||++.|++..+++.+++|.|..+.....+.+|.|+||||||+|.||+.+|+++++||++|++|||++...+.+...|+
T Consensus 110 ~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 189 (330)
T 4e5n_A 110 GLAVGLGRHLRAADAFVRSGKFRGWQPRFYGTGLDNATVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQTEQRLGL 189 (330)
T ss_dssp HHHHHHHTTHHHHHHHHHTTCCCSCCSCCCCCCSTTCEEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHHTE
T ss_pred HHHHHHHhChHHHHHHHHhCCccccCccccCCccCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhcCc
Confidence 47999999999999999999997432233578999999999999999999999999999999999998755666666777
Q ss_pred eecCCHHhhcccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCCC--
Q 027408 81 KFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQ-- 158 (223)
Q Consensus 81 ~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~e-- 158 (223)
... ++++++++||+|++|+|++++|.++++++.++.||+|++|||++||+++|+++|+++|++|+|.||+||||++|
T Consensus 190 ~~~-~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~E~~ 268 (330)
T 4e5n_A 190 RQV-ACSELFASSDFILLALPLNADTLHLVNAELLALVRPGALLVNPCRGSVVDEAAVLAALERGQLGGYAADVFEMEDW 268 (330)
T ss_dssp EEC-CHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCGGGCT
T ss_pred eeC-CHHHHHhhCCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCccEEEecccccccc
Confidence 655 89999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -----CCCCCCCccCCCCeEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCcceecc
Q 027408 159 -----PAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVK 214 (223)
Q Consensus 159 -----p~~~~~~l~~~~nv~~tPH~a~~t~~~~~~~~~~~~~~i~~~~~g~~~~~~n~~~~ 214 (223)
|++.++|||.+|||++|||+|++|.|+.+++...+++||.+|++|+++ .|.||.
T Consensus 269 ~~~~~Pl~~~~~L~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~~~g~~~--~~~vn~ 327 (330)
T 4e5n_A 269 ARADRPQQIDPALLAHPNTLFTPHIGSAVRAVRLEIERCAAQNILQALAGERP--INAVNR 327 (330)
T ss_dssp TCTTCCSSCCHHHHTCSSEEECSSCTTCCHHHHHHHHHHHHHHHHHHHTTSCC--TTBSSC
T ss_pred cccCCCCCCCchHHcCCCEEECCcCCCChHHHHHHHHHHHHHHHHHHHcCCCC--CCccCC
Confidence 999999999999999999999999999999999999999999999874 566654
No 6
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=100.00 E-value=5.8e-52 Score=360.25 Aligned_cols=214 Identities=21% Similarity=0.307 Sum_probs=188.3
Q ss_pred CcHHHHHhCchHH-HHHHHcCCCccCcccCcccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhC
Q 027408 1 MRILILVRNFLPG-HHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETG 79 (223)
Q Consensus 1 ~~~l~~~R~~~~~-~~~~~~~~w~~~~~~~~~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g 79 (223)
++||++.|++..+ ++.+++|.|.+.. .+++|.|+||||||+|.||+.+|+++++||++|++|||++...+....
T Consensus 104 ~~~L~~~R~~~~~~~~~~~~~~W~~~~---~~~~l~gktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~-- 178 (324)
T 3evt_A 104 AAMLSVVRGYHAAWLNQRGARQWALPM---TTSTLTGQQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPADHFHE-- 178 (324)
T ss_dssp HHHHHHHTTHHHHHHHHTTTCCSSCSS---CCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCCCCTTCSE--
T ss_pred HHHHHHHhChhHHHHHHHhcCCcccCC---CCccccCCeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcchhHhHhh--
Confidence 4799999999999 9999999998643 467999999999999999999999999999999999998643322211
Q ss_pred CeecCCHHhhcccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCCCC
Q 027408 80 AKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQP 159 (223)
Q Consensus 80 ~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~ep 159 (223)
.....++++++++||+|++|+|++++|+++++++.++.||+|++|||+|||+++|+++|+++|++|++.||+||||++||
T Consensus 179 ~~~~~~l~ell~~aDvV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EP 258 (324)
T 3evt_A 179 TVAFTATADALATANFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIGRGPAVDTTALMTALDHHQLSMAALDVTEPEP 258 (324)
T ss_dssp EEEGGGCHHHHHHCSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHTTSCSEEEESSCSSSS
T ss_pred ccccCCHHHHHhhCCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHhCCceEEEeCCCCCCC
Confidence 12345899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccCCCCeEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCcceeccCCCcCC
Q 027408 160 APKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVKAGELAP 220 (223)
Q Consensus 160 ~~~~~~l~~~~nv~~tPH~a~~t~~~~~~~~~~~~~~i~~~~~g~~~~~~n~~~~~~~~~~ 220 (223)
++.++|||.+|||++|||+|++|.++.+++...+++|+.+|++|++. +.|.|+++-+..+
T Consensus 259 l~~~~pL~~~~nvilTPHia~~t~~~~~~~~~~~~~nl~~~l~~~~~-~~n~V~~~~~~~~ 318 (324)
T 3evt_A 259 LPTDHPLWQRDDVLITPHISGQIAHFRATVFPIFAANFAQFVKDGTL-VRNQVDLNRGYEG 318 (324)
T ss_dssp CCTTCGGGGCSSEEECCSCTTCCCCHHHHHHHHHHHHHHHHHHHSCC-CSCBCC-------
T ss_pred CCCCChhhcCCCEEEcCccccChHHHHHHHHHHHHHHHHHHHhCCCC-CCceECcccccCC
Confidence 99999999999999999999999999999999999999999987643 5788888765543
No 7
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=100.00 E-value=6.5e-51 Score=358.12 Aligned_cols=215 Identities=24% Similarity=0.324 Sum_probs=189.0
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcc-cCcccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhC
Q 027408 1 MRILILVRNFLPGHHQVISGEWNVAGV-AYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETG 79 (223)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~~~w~~~~~-~~~~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g 79 (223)
++||++.|++..+++.+++|.|.+... ...+.+|.|+||||||+|.||+.+|+++++||++|++||++. ..+.+...|
T Consensus 140 ~l~L~~~R~~~~~~~~~r~g~~~w~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~-~~~~~~~~g 218 (365)
T 4hy3_A 140 GFALALARGIVDADIAFQEGTELWGGEGNASARLIAGSEIGIVGFGDLGKALRRVLSGFRARIRVFDPWL-PRSMLEENG 218 (365)
T ss_dssp HHHHHHHHTTTHHHHHHHHTCCCCSSSSTTSCCCSSSSEEEEECCSHHHHHHHHHHTTSCCEEEEECSSS-CHHHHHHTT
T ss_pred HHHHHHHhchhHHHHHHHcCCccccccccccccccCCCEEEEecCCcccHHHHHhhhhCCCEEEEECCCC-CHHHHhhcC
Confidence 479999999999999999999543221 234789999999999999999999999999999999999975 445555667
Q ss_pred CeecCCHHhhcccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCCCC
Q 027408 80 AKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQP 159 (223)
Q Consensus 80 ~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~ep 159 (223)
+.. .++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|+++|++|+|. |+||||++||
T Consensus 219 ~~~-~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~-aaLDV~~~EP 296 (365)
T 4hy3_A 219 VEP-ASLEDVLTKSDFIFVVAAVTSENKRFLGAEAFSSMRRGAAFILLSRADVVDFDALMAAVSSGHIV-AASDVYPEEP 296 (365)
T ss_dssp CEE-CCHHHHHHSCSEEEECSCSSCC---CCCHHHHHTSCTTCEEEECSCGGGSCHHHHHHHHHTTSSE-EEESCCSSSS
T ss_pred eee-CCHHHHHhcCCEEEEcCcCCHHHHhhcCHHHHhcCCCCcEEEECcCCchhCHHHHHHHHHcCCce-EEeeCCCCCC
Confidence 765 48999999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred CCCCCCccCCCCeEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCcceeccCCCcCC
Q 027408 160 APKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVKAGELAP 220 (223)
Q Consensus 160 ~~~~~~l~~~~nv~~tPH~a~~t~~~~~~~~~~~~~~i~~~~~g~~~~~~n~~~~~~~~~~ 220 (223)
++.++|||.+|||++|||+||+|.|++.++...+++||.+|++|+++ .|.+|.+-+.-+
T Consensus 297 l~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~~~G~~~--~~~vn~~~~~~~ 355 (365)
T 4hy3_A 297 LPLDHPVRSLKGFIRSAHRAGALDSAFKKMGDMVLEDMDLMDRGLPP--MRCKRAERETVS 355 (365)
T ss_dssp CCTTCGGGTCTTEEECCSCSSCCHHHHHHHHHHHHHHHHHHHTTCCC--CSSEECCSCCC-
T ss_pred CCCCChhhcCCCEEECCccccCHHHHHHHHHHHHHHHHHHHHcCCCc--ccccccchhhhh
Confidence 99999999999999999999999999999999999999999999986 345554433333
No 8
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=100.00 E-value=2.7e-51 Score=359.65 Aligned_cols=210 Identities=22% Similarity=0.329 Sum_probs=192.4
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCc--------ccCcccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCCh
Q 027408 1 MRILILVRNFLPGHHQVISGEWNVAG--------VAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDP 72 (223)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~~~w~~~~--------~~~~~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~ 72 (223)
++||++.|++..+++.+++|.|.... ....+.+|.|+||||||+|.||+.+|+++++||++|++||++. ..
T Consensus 117 ~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~~~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~ 195 (352)
T 3gg9_A 117 ALVMAAQRRIPQYVASLKHGAWQQSGLKSTTMPPNFGIGRVLKGQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGREN-SK 195 (352)
T ss_dssp HHHHHHHTTHHHHHHHHHTTCTTCCCCCCTTSCTTTTSBCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSHH-HH
T ss_pred HHHHHHHhhHHHHHHHHHcCCCCcccccccccccccccCccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEECCCC-CH
Confidence 47999999999999999999997632 1124689999999999999999999999999999999999974 33
Q ss_pred hHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEe
Q 027408 73 QLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSG 152 (223)
Q Consensus 73 ~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~l 152 (223)
+.+...|+...+++++++++||+|++|+|++++|+++++++.++.||+|++|||+|||+++|+++|+++|++|+|.||+|
T Consensus 196 ~~~~~~g~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~l 275 (352)
T 3gg9_A 196 ERARADGFAVAESKDALFEQSDVLSVHLRLNDETRSIITVADLTRMKPTALFVNTSRAELVEENGMVTALNRGRPGMAAI 275 (352)
T ss_dssp HHHHHTTCEECSSHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCTTHHHHHHHHTSSSEEEE
T ss_pred HHHHhcCceEeCCHHHHHhhCCEEEEeccCcHHHHHhhCHHHHhhCCCCcEEEECCCchhhcHHHHHHHHHhCCccEEEe
Confidence 44556788777799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCCCCCCccCCCCeEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCcce
Q 027408 153 DVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNY 211 (223)
Q Consensus 153 Dv~~~ep~~~~~~l~~~~nv~~tPH~a~~t~~~~~~~~~~~~~~i~~~~~g~~~~~~n~ 211 (223)
|||++||++.++|||.+|||++|||+|++|.++.+++...+++||.+|++|+|.+.+|.
T Consensus 276 DV~~~EPl~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~~~G~p~~~Vn~ 334 (352)
T 3gg9_A 276 DVFETEPILQGHTLLRMENCICTPHIGYVERESYEMYFGIAFQNILDILQGNVDSVANP 334 (352)
T ss_dssp CCCSSSCCCSCCGGGGCTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHTTCCTTBSCG
T ss_pred cccCCCCCCCCChhhcCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCcccCH
Confidence 99999999999999999999999999999999999999999999999999987654444
No 9
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=100.00 E-value=1.2e-51 Score=357.15 Aligned_cols=208 Identities=23% Similarity=0.343 Sum_probs=185.4
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCC
Q 027408 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA 80 (223)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 80 (223)
++||++.|++..+++.+++|.|... .++++.|+||||||+|.||+.+|+++++||++|++|||++...+.....
T Consensus 108 ~~~L~~~R~~~~~~~~~~~g~W~~~----~~~~l~g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~-- 181 (315)
T 3pp8_A 108 SQVLHWFRRFDDYQALKNQALWKPL----PEYTREEFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSWPGVESY-- 181 (315)
T ss_dssp HHHHHHHTTHHHHHHHHHTTCCCCC----CCCCSTTCCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCCCTTCEEE--
T ss_pred HHHHHHHhCChHHHHHHHhcccCCC----CCCCcCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchhhhhhhhh--
Confidence 4799999999999999999999754 3578999999999999999999999999999999999976432211111
Q ss_pred eecCCHHhhcccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCCCCC
Q 027408 81 KFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPA 160 (223)
Q Consensus 81 ~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~ep~ 160 (223)
....++++++++||+|++|+|++++|+++++++.++.||+|++|||+|||+++|+++|+++|++|++.||+||||++||+
T Consensus 182 ~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl 261 (315)
T 3pp8_A 182 VGREELRAFLNQTRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLARGVHVQEADLLAALDSGKLKGAMLDVFSQEPL 261 (315)
T ss_dssp ESHHHHHHHHHTCSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSC
T ss_pred cccCCHHHHHhhCCEEEEecCCchhhhhhccHHHHhhCCCCCEEEECCCChhhhHHHHHHHHHhCCccEEEcCCCCCCCC
Confidence 11258999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCeEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCcceeccCCCc
Q 027408 161 PKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVKAGEL 218 (223)
Q Consensus 161 ~~~~~l~~~~nv~~tPH~a~~t~~~~~~~~~~~~~~i~~~~~g~~~~~~n~~~~~~~~ 218 (223)
+.++|||.+|||++|||+|++|.+ .++...+++||.+|++|++ +.|.|+++-+|
T Consensus 262 ~~~~pL~~~~nvilTPHia~~t~~--~~~~~~~~~ni~~~~~G~~--~~~~V~~~~GY 315 (315)
T 3pp8_A 262 PQESPLWRHPRVAMTPHIAAVTRP--AEAIDYISRTITQLEKGEP--VTGQVDRARGY 315 (315)
T ss_dssp CTTCGGGGCTTEEECSSCSSCCCH--HHHHHHHHHHHHHHHHTCC--CCCBCCCC---
T ss_pred CCCChhhcCCCEEECCCCCcccHH--HHHHHHHHHHHHHHHcCCC--CCceECcccCC
Confidence 999999999999999999999986 5788899999999999997 47888887664
No 10
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=100.00 E-value=2.8e-51 Score=355.63 Aligned_cols=210 Identities=23% Similarity=0.306 Sum_probs=185.7
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCC
Q 027408 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA 80 (223)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 80 (223)
++||++.|++..+++.+++|.|... .+.+|.|+||||||+|.||+.+|+++++||++|++|||++...+... +.
T Consensus 109 ~~~L~~~R~~~~~~~~~~~g~W~~~----~~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~--~~ 182 (324)
T 3hg7_A 109 GHLLSLMRQLPLYREQQKQRLWQSH----PYQGLKGRTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGRERAGFD--QV 182 (324)
T ss_dssp HHHHHHHTTHHHHHHHHHTTCCCCC----CCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCCTTCS--EE
T ss_pred HHHHHHHhChHHHHHHHhhCCCcCC----CCcccccceEEEEEECHHHHHHHHHHHhCCCEEEEEcCChHHhhhhh--cc
Confidence 4799999999999999999999753 35699999999999999999999999999999999999763322211 12
Q ss_pred eecCCHHhhcccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCCCCC
Q 027408 81 KFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPA 160 (223)
Q Consensus 81 ~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~ep~ 160 (223)
....++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|+++|++|+|.||+||||++||+
T Consensus 183 ~~~~~l~ell~~aDvV~l~lPlt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~EPl 262 (324)
T 3hg7_A 183 YQLPALNKMLAQADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVGRGNAINEGDLLTALRTGKLGMAVLDVFEQEPL 262 (324)
T ss_dssp ECGGGHHHHHHTCSEEEECCCCCSSSTTSBCTTTTTCSCTTCEEEECSCGGGBCHHHHHHHHHTTSSSEEEESCCSSSSC
T ss_pred cccCCHHHHHhhCCEEEEeCCCCHHHHHHhHHHHHhcCCCCcEEEECCCchhhCHHHHHHHHHcCCceEEEeccCCCCCC
Confidence 23468999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCeEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCcceeccCCCcCC
Q 027408 161 PKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVKAGELAP 220 (223)
Q Consensus 161 ~~~~~l~~~~nv~~tPH~a~~t~~~~~~~~~~~~~~i~~~~~g~~~~~~n~~~~~~~~~~ 220 (223)
+.++|||.+|||++|||+|++|.+ .++...+++|+.+|++|++ +.|.|+++-.+.+
T Consensus 263 ~~~~pL~~~~nvilTPHia~~t~~--~~~~~~~~~nl~~~~~G~~--~~~~V~~~~~~~~ 318 (324)
T 3hg7_A 263 PADSPLWGQPNLIITPHNSAYSFP--DDVAQIFVRNYIRFIDGQP--LDGKIDFDKGYEG 318 (324)
T ss_dssp CTTCTTTTCTTEEECCSCSSCCCH--HHHHHHHHHHHHHHHTTCC--CTTBCCCC-----
T ss_pred CCCChhhcCCCEEEeCCCccccHH--HHHHHHHHHHHHHHHcCCC--CcceEChhhhccc
Confidence 999999999999999999999976 4688899999999999997 4788887766654
No 11
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=100.00 E-value=2.1e-50 Score=358.02 Aligned_cols=220 Identities=48% Similarity=0.857 Sum_probs=197.2
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCC
Q 027408 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA 80 (223)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 80 (223)
++||++.|++..+++.+++|.|........+.+|.|++|||||+|.||+.+|+++++||++|++||++....+.+...|+
T Consensus 156 ~liL~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~ 235 (393)
T 2nac_A 156 MMILSLVRNYLPSHEWARKGGWNIADCVSHAYDLEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNL 235 (393)
T ss_dssp HHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCCTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTC
T ss_pred HHHHHHHhccHHHHHHHHcCCCCccccccCCccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchhhHhhcCc
Confidence 47999999999999999999997422112357899999999999999999999999999999999998766666667788
Q ss_pred eecCCHHhhcccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCCCCC
Q 027408 81 KFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPA 160 (223)
Q Consensus 81 ~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~ep~ 160 (223)
....++++++++||+|++|+|++++|+++++++.++.||+|++|||++||+++|+++|.++|++|+|.||+||||++||+
T Consensus 236 ~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~lDV~~~EP~ 315 (393)
T 2nac_A 236 TWHATREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESGRLAGYAGDVWFPQPA 315 (393)
T ss_dssp EECSSHHHHGGGCSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESCCSSSSC
T ss_pred eecCCHHHHHhcCCEEEEecCCchHHHHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHHcCCeeEEEEEecCCCCC
Confidence 76678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCeEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCcceeccCCCcCC
Q 027408 161 PKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVKAGELAP 220 (223)
Q Consensus 161 ~~~~~l~~~~nv~~tPH~a~~t~~~~~~~~~~~~~~i~~~~~g~~~~~~n~~~~~~~~~~ 220 (223)
+.++|||.+||+++|||+|++|.++..++...+++||.+|++|+++.....+...|.+++
T Consensus 316 ~~~~pL~~~~nvilTPHia~~T~e~~~~~~~~~~~nl~~~~~G~~~~~~~~~v~~~~~~~ 375 (393)
T 2nac_A 316 PKDHPWRTMPYNGMTPHISGTTLTAQARYAAGTREILECFFEGRPIRDEYLIVQGGALAG 375 (393)
T ss_dssp CTTCGGGTSTTBCCCCSCTTCSHHHHHHHHHHHHHHHHHHHHTCCCCGGGEEEETTEEC-
T ss_pred CCCChhHcCCCEEECCCCCcCcHHHHHHHHHHHHHHHHHHHcCCCCcceeEeccCCcccc
Confidence 999999999999999999999999999999999999999999998633333345566553
No 12
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=100.00 E-value=2.5e-51 Score=357.86 Aligned_cols=210 Identities=28% Similarity=0.369 Sum_probs=190.9
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCC
Q 027408 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA 80 (223)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 80 (223)
++||++.|++..+++.+++|.|.+.. ...+.+|.|+||||||+|.||+.+|+++++||++|++||++.... ....++
T Consensus 107 ~l~L~~~R~~~~~~~~~~~g~w~~~~-~~~~~~l~g~tvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~--~~~~g~ 183 (334)
T 2pi1_A 107 AMILTLVKRLKRIEDRVKKLNFSQDS-EILARELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKRED--LKEKGC 183 (334)
T ss_dssp HHHHHHHTTHHHHHHHHTTTCCCCCG-GGCBCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH--HHHTTC
T ss_pred HHHHHHHHhHHHHHHHHHcCCCcccc-CccceeccCceEEEECcCHHHHHHHHHHHHCcCEEEEECCCcchh--hHhcCc
Confidence 47999999999999999999998641 124789999999999999999999999999999999999976432 224566
Q ss_pred eecCCHHhhcccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCCCCC
Q 027408 81 KFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPA 160 (223)
Q Consensus 81 ~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~ep~ 160 (223)
... ++++++++||+|++|+|++++|+++++++.++.||+|++|||+|||+++|+++|+++|++|+|.||+||||++||+
T Consensus 184 ~~~-~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP~ 262 (334)
T 2pi1_A 184 VYT-SLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEEI 262 (334)
T ss_dssp EEC-CHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHHH
T ss_pred eec-CHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEeecCCCCCC
Confidence 655 6999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred ---------------CCCCCccCCCCeEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCcceeccCC
Q 027408 161 ---------------PKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVKAG 216 (223)
Q Consensus 161 ---------------~~~~~l~~~~nv~~tPH~a~~t~~~~~~~~~~~~~~i~~~~~g~~~~~~n~~~~~~ 216 (223)
+.++|||.+|||++|||+|++|.++.+++...+++||.+|++|+++ .|.|++.-
T Consensus 263 ~~~~~~~~~~~~~~~~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~~~g~~~--~~~Vn~~~ 331 (334)
T 2pi1_A 263 LILKKYTEGKATDKNLKILELACKDNVIITPHIAYYTDKSLERIREETVKVVKAFVKGDLE--QIKGNFVV 331 (334)
T ss_dssp HHTTGGGGTCCCHHHHHHHHHHTSTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHHTCGG--GGGGGEEE
T ss_pred ccccccccccccccCccCChhhcCCCEEECCccccChHHHHHHHHHHHHHHHHHHHcCCCC--CceECccc
Confidence 5688999999999999999999999999999999999999999974 67777653
No 13
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.1e-50 Score=352.28 Aligned_cols=200 Identities=25% Similarity=0.408 Sum_probs=158.1
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCC
Q 027408 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA 80 (223)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 80 (223)
++||+++|++..+++.+++|.|........+.+|.|+||||||+|.||+.+|+++++||++|++|||++.. ..+.
T Consensus 136 ~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktiGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~-----~~~~ 210 (340)
T 4dgs_A 136 ALMLAVLRRVGDGDRLVREGRWAAGEQLPLGHSPKGKRIGVLGLGQIGRALASRAEAFGMSVRYWNRSTLS-----GVDW 210 (340)
T ss_dssp HHHHHHHTTHHHHHHHHHTTCC------CCCCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCT-----TSCC
T ss_pred HHHHHHHhChHHHHHHHhcCCcccccCcCccccccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCccc-----ccCc
Confidence 47999999999999999999998641112467999999999999999999999999999999999997643 2244
Q ss_pred eecCCHHhhcccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCCCCC
Q 027408 81 KFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPA 160 (223)
Q Consensus 81 ~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~ep~ 160 (223)
....++++++++||+|++|+|++++|+++++++.++.||+++++||++||+++|+++|+++|++|+|.||+||||++||+
T Consensus 211 ~~~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDVf~~EP~ 290 (340)
T 4dgs_A 211 IAHQSPVDLARDSDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARGNVVDEDALIEALKSGTIAGAGLDVFVNEPA 290 (340)
T ss_dssp EECSSHHHHHHTCSEEEECC----------CHHHHHHTTTTCEEEECSCC--------------CCSSEEEESCCSSSSS
T ss_pred eecCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCceEEEeCCcCCCCC
Confidence 55679999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCccCCCCeEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCC
Q 027408 161 PKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDF 206 (223)
Q Consensus 161 ~~~~~l~~~~nv~~tPH~a~~t~~~~~~~~~~~~~~i~~~~~g~~~ 206 (223)
+. +|||.+|||++|||+|++|.|+++++...+++||.+|++|+++
T Consensus 291 ~~-~~L~~~~nvilTPHia~~t~e~~~~~~~~~~~nl~~~~~g~~~ 335 (340)
T 4dgs_A 291 IR-SEFHTTPNTVLMPHQGSATVETRMAMGKLVLANLAAHFAGEKA 335 (340)
T ss_dssp CC-SHHHHSSSEEECSSCSSCCHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred Cc-cchhhCCCEEEcCcCCcCCHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 76 4999999999999999999999999999999999999999985
No 14
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=100.00 E-value=1.8e-49 Score=353.42 Aligned_cols=207 Identities=29% Similarity=0.465 Sum_probs=181.8
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCC
Q 027408 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA 80 (223)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 80 (223)
++||+++|++..+++.+++|.|.+.. ..+.+|+||||||||+|.||+.+|+++++|||+|++||+++... ..+.
T Consensus 123 ~l~L~l~R~i~~~~~~~~~g~W~~~~--~~~~el~gktvGIIGlG~IG~~vA~~l~~~G~~V~~yd~~~~~~----~~~~ 196 (416)
T 3k5p_A 123 GEIIMLMRRIFPRSVSAHAGGWEKTA--IGSREVRGKTLGIVGYGNIGSQVGNLAESLGMTVRYYDTSDKLQ----YGNV 196 (416)
T ss_dssp HHHHHHHTTHHHHHHHHHTTCCCCCC--TTCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCCCC----BTTB
T ss_pred HHHHHHhcccHHHHHhhhcccccccC--CCCccCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCcchhc----ccCc
Confidence 47899999999999999999998654 24679999999999999999999999999999999999975322 1134
Q ss_pred eecCCHHhhcccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCCCCC
Q 027408 81 KFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPA 160 (223)
Q Consensus 81 ~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~ep~ 160 (223)
....++++++++||+|++|+|++++|+++++++.++.||+|++|||+|||+++|++||+++|++|++.||+||||+.||+
T Consensus 197 ~~~~sl~ell~~aDvV~lhvPlt~~T~~li~~~~l~~mk~gailIN~aRG~vvd~~aL~~aL~~g~i~gAalDVf~~EP~ 276 (416)
T 3k5p_A 197 KPAASLDELLKTSDVVSLHVPSSKSTSKLITEAKLRKMKKGAFLINNARGSDVDLEALAKVLQEGHLAGAAIDVFPVEPA 276 (416)
T ss_dssp EECSSHHHHHHHCSEEEECCCC-----CCBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEECCCSSCCS
T ss_pred EecCCHHHHHhhCCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCccEEEeCCCCCCCC
Confidence 45679999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCC----CCccCCCCeEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCC-CCcceec
Q 027408 161 PKD----HPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDF-PVQNYIV 213 (223)
Q Consensus 161 ~~~----~~l~~~~nv~~tPH~a~~t~~~~~~~~~~~~~~i~~~~~g~~~-~~~n~~~ 213 (223)
+.+ +|||.+|||++|||+|++|.|+++++...+++|+.+|++++++ +.+|...
T Consensus 277 ~~~~~~~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~nl~~~l~~g~~~~~Vn~p~ 334 (416)
T 3k5p_A 277 SNGERFSTPLQGLENVILTPHIGGSTEEAQERIGTEVTRKLVEYSDVGSTVGAVNFPQ 334 (416)
T ss_dssp STTSCCCCTTTTCTTEEECCSCTTCCHHHHHHHHHHHHHHHHHHHHHCCCTTBSSSCC
T ss_pred CcccccchhHhcCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCceeeCCC
Confidence 765 7899999999999999999999999999999999999966553 5555443
No 15
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=100.00 E-value=1.3e-49 Score=347.71 Aligned_cols=207 Identities=23% Similarity=0.295 Sum_probs=184.1
Q ss_pred CcHHHHHhCchHHHHHHH-cCCCccCcccCcccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhC
Q 027408 1 MRILILVRNFLPGHHQVI-SGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETG 79 (223)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~-~~~w~~~~~~~~~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g 79 (223)
++||++.|++..+++.++ +|.|.+.. ...+.+|.|+||||||+|.||+.+|+++++||++|++|||++.. . ...+
T Consensus 113 ~l~L~~~R~~~~~~~~~~~~g~~~w~~-~~~~~~l~gktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~--~~~~ 188 (343)
T 2yq5_A 113 TQAMYLLRKIGEFRYRMDHDHDFTWPS-NLISNEIYNLTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNP-E--FEPF 188 (343)
T ss_dssp HHHHHHHHTHHHHHHHHHHHCCCCCCG-GGCBCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCG-G--GTTT
T ss_pred HHHHHHHhchHHHHHHHHHcCCccccc-CCCccccCCCeEEEEecCHHHHHHHHHHhhCCCEEEEECCChhh-h--hhcc
Confidence 479999999999999999 89876422 23578999999999999999999999999999999999997642 1 1223
Q ss_pred CeecCCHHhhcccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCCCC
Q 027408 80 AKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQP 159 (223)
Q Consensus 80 ~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~ep 159 (223)
+... ++++++++||+|++|+|++++|+++++++.++.||+|++|||+|||+++|+++|+++|++|+|.||+||||++||
T Consensus 189 ~~~~-~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP 267 (343)
T 2yq5_A 189 LTYT-DFDTVLKEADIVSLHTPLFPSTENMIGEKQLKEMKKSAYLINCARGELVDTGALIKALQDGEIAGAGLDTLAGES 267 (343)
T ss_dssp CEEC-CHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSCEEESCCTTGG
T ss_pred cccc-CHHHHHhcCCEEEEcCCCCHHHHHHhhHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCCcEEEecccccCC
Confidence 4444 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred --CCCC-----------CCccCCCCeEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCcceecc
Q 027408 160 --APKD-----------HPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVK 214 (223)
Q Consensus 160 --~~~~-----------~~l~~~~nv~~tPH~a~~t~~~~~~~~~~~~~~i~~~~~g~~~~~~n~~~~ 214 (223)
.+.+ +|||.+|||++|||+|++|.++.+++...+++||.+|++|+++ .|.|+.
T Consensus 268 ~~~~~~~~~~~~l~~~~~pL~~~~nvilTPHia~~t~ea~~~~~~~~~~ni~~~l~g~~~--~~~v~~ 333 (343)
T 2yq5_A 268 SYFGHTGLTDSEIPEDYKTLAKMPNVVITPHSAFYTETSIRNMVQICLTDQLTIAKGGRP--RSIVNL 333 (343)
T ss_dssp GTTTCCSCCTTTSCHHHHHHTTCTTEEECSSCTTCBHHHHHHHHHHHHHHHHHHHTTCCC--TTBC--
T ss_pred CccccccccccccccchhHHhcCCCEEECCccccchHHHHHHHHHHHHHHHHHHHcCCCC--CceECC
Confidence 4454 4899999999999999999999999999999999999999985 454543
No 16
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=100.00 E-value=2.9e-49 Score=352.45 Aligned_cols=207 Identities=27% Similarity=0.397 Sum_probs=178.3
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCC
Q 027408 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA 80 (223)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 80 (223)
++||+++|++..+++.+++|.|.+.. ..+.+|+|||+||||+|.||+.+|+++++|||+|++|||++... ..++
T Consensus 112 ~~~L~~~R~i~~~~~~~~~g~W~~~~--~~~~el~gktlGiIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~----~~~~ 185 (404)
T 1sc6_A 112 GELLLLLRGVPEANAKAHRGVGNKLA--AGSFEARGKKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKLP----LGNA 185 (404)
T ss_dssp HHHHHHHHTHHHHHHHHHHTCCC-------CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCC----CTTC
T ss_pred HHHHHHHhChHHHHHHHHcCCccccC--CCccccCCCEEEEEeECHHHHHHHHHHHHCCCEEEEEcCCchhc----cCCc
Confidence 47999999999999999999997543 34679999999999999999999999999999999999975321 1135
Q ss_pred eecCCHHhhcccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCCCCC
Q 027408 81 KFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPA 160 (223)
Q Consensus 81 ~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~ep~ 160 (223)
....++++++++||+|++|+|++++|+++++++.++.||+|+++||+|||+++|+++|+++|++|++.||+||||+.||+
T Consensus 186 ~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIN~aRg~~vd~~aL~~aL~~g~i~gA~lDVf~~EP~ 265 (404)
T 1sc6_A 186 TQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVVDIPALADALASKHLAGAAIDVFPTEPA 265 (404)
T ss_dssp EECSCHHHHHHHCSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEECSCSSSBCHHHHHHHHHTTSEEEEEEEC------
T ss_pred eecCCHHHHHhcCCEEEEccCCChHHHHHhhHHHHhhcCCCeEEEECCCChHHhHHHHHHHHHcCCccEEEEeecCCCCC
Confidence 55678999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CC----CCCccCCCCeEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCcceeccC
Q 027408 161 PK----DHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVKA 215 (223)
Q Consensus 161 ~~----~~~l~~~~nv~~tPH~a~~t~~~~~~~~~~~~~~i~~~~~g~~~~~~n~~~~~ 215 (223)
+. ++|||.+|||++|||+|++|.|+++++...+++|+.+|++|+++ .|.||+.
T Consensus 266 ~~~~~~~~pL~~~~nvilTPHi~~~T~ea~~~~~~~~~~nl~~~l~g~~~--~~~vn~p 322 (404)
T 1sc6_A 266 TNSDPFTSPLAEFDNVLLTPHIGGSTQEAQENIGLEVAGKLIKYSDNGST--LSAVNFP 322 (404)
T ss_dssp ---CTTTGGGTTCTTEEEECCCSCCSHHHHHHHHHHHHHHHHHHHHHCCC--TTBSSSC
T ss_pred CccccccchhhcCCCEEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCC--cceeccc
Confidence 64 47999999999999999999999999999999999999998764 5555544
No 17
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=100.00 E-value=1.7e-48 Score=340.08 Aligned_cols=207 Identities=24% Similarity=0.348 Sum_probs=185.1
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCC
Q 027408 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA 80 (223)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 80 (223)
++||++.|++..+++.+++|.|.+.. ..+.++.|++|||||+|.||+.+|++++++|++|++||++.... .... +
T Consensus 113 ~l~L~~~R~~~~~~~~~~~g~w~~~~--~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~~~~-~ 187 (333)
T 1j4a_A 113 IQAARILRQDKAMDEKVARHDLRWAP--TIGREVRDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPE--LEKK-G 187 (333)
T ss_dssp HHHHHHHHTHHHHHHHHHTTBCCCTT--CCBCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH--HHHT-T
T ss_pred HHHHHHHcCHHHHHHHHHcCCCccCC--cccccCCCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchh--HHhh-C
Confidence 47999999999999999999996432 34679999999999999999999999999999999999976432 2232 4
Q ss_pred eecCCHHhhcccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCCCC-
Q 027408 81 KFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQP- 159 (223)
Q Consensus 81 ~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~ep- 159 (223)
....++++++++||+|++|+|++++|+++++++.++.||+++++||++||+++|+++|+++|++|+|.||+||||++||
T Consensus 188 ~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~ 267 (333)
T 1j4a_A 188 YYVDSLDDLYKQADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGLDSGKIFGYAMDVYEGEVG 267 (333)
T ss_dssp CBCSCHHHHHHHCSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTCTT
T ss_pred eecCCHHHHHhhCCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEEecCCCCCC
Confidence 4445899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -CCCCC-----------CccCCCCeEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCcceecc
Q 027408 160 -APKDH-----------PWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVK 214 (223)
Q Consensus 160 -~~~~~-----------~l~~~~nv~~tPH~a~~t~~~~~~~~~~~~~~i~~~~~g~~~~~~n~~~~ 214 (223)
++.++ |||.+|||++|||+|++|.++.+++...+++|+.+|++|+++ .|.|++
T Consensus 268 ~l~~~~~~~~~~~p~~~~L~~~~nvilTPHia~~t~~~~~~~~~~~~~nl~~~~~g~~~--~~~v~~ 332 (333)
T 1j4a_A 268 IFNEDWEGKEFPDARLADLIARPNVLVTPKTAFYTTHAVRNMVVKAFDNNLELVEGKEA--ETPVKV 332 (333)
T ss_dssp TTTSBCTTSCCSCHHHHHHHHCTTEEECSSCTTCBHHHHHHHHHHHHHHHHHHHTTCCC--SSBCCC
T ss_pred ccccccccccCCccchhhHHhCCCEEECCccccCHHHHHHHHHHHHHHHHHHHHcCCCC--CccccC
Confidence 34443 599999999999999999999999999999999999999874 566653
No 18
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=6.9e-48 Score=332.18 Aligned_cols=208 Identities=20% Similarity=0.293 Sum_probs=188.4
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCC
Q 027408 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA 80 (223)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 80 (223)
++||++.|++..+++.+++|.|.... ...+|.|++|||||+|.||+.+|++++++|++|++|||++. .. +.
T Consensus 92 ~~~L~~~R~~~~~~~~~~~g~w~~~~---~~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~dr~~~-~~-----~~ 162 (303)
T 1qp8_A 92 ALLLAPYKRIIQYGEKMKRGDYGRDV---EIPLIQGEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPK-EG-----PW 162 (303)
T ss_dssp HHHHHHHTTHHHHHHHHHTTCCCCCS---CCCCCTTCEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCC-CS-----SS
T ss_pred HHHHHHHhCHHHHHHHHHcCCCCCCC---CCCCCCCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcc-cc-----Cc
Confidence 47999999999999999999996431 23489999999999999999999999999999999999764 21 34
Q ss_pred eecCCHHhhcccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCC-CCCC
Q 027408 81 KFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVW-NPQP 159 (223)
Q Consensus 81 ~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~-~~ep 159 (223)
....++++++++||+|++|+|++++|+++++++.++.||+|+++||+|||+++|+++|.++|++|++.||++||| ++||
T Consensus 163 ~~~~~l~ell~~aDvV~l~~P~~~~t~~~i~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~g~i~gA~lDv~~~~ep 242 (303)
T 1qp8_A 163 RFTNSLEEALREARAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVGRAEVLDRDGVLRILKERPQFIFASDVWWGRND 242 (303)
T ss_dssp CCBSCSHHHHTTCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTC
T ss_pred ccCCCHHHHHhhCCEEEEeCcCchHHHHHhCHHHHhhCCCCCEEEECCCCcccCHHHHHHHHHhCCceEEEeccCCCCCC
Confidence 445689999999999999999999999999999999999999999999999999999999999999999999999 8899
Q ss_pred CCCCCCccCCCCeEEccCCCCC--cHHHHHHHHHHHHHHHHHHHcCCCCCCcceeccCCCcCC
Q 027408 160 APKDHPWRYMPNQAMTPHVSGT--TIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVKAGELAP 220 (223)
Q Consensus 160 ~~~~~~l~~~~nv~~tPH~a~~--t~~~~~~~~~~~~~~i~~~~~g~~~~~~n~~~~~~~~~~ 220 (223)
++.++|||.++|+++|||++++ |.++.+++...+++|+.+|++|++ +.|.|+++ +|.+
T Consensus 243 ~~~~~~L~~~~nviltPH~~~~~~t~e~~~~~~~~~~~nl~~~~~g~~--~~~~v~~~-~y~~ 302 (303)
T 1qp8_A 243 FAKDAEFFSLPNVVATPWVAGGYGNERVWRQMVMEAVRNLITYATGGR--PRNIAKRE-DYIG 302 (303)
T ss_dssp CGGGHHHHTSTTEEECCSCSSSSSCHHHHHHHHHHHHHHHHHHHTTSC--CSCBCCGG-GTC-
T ss_pred CCCCChhhcCCCEEECCCcCCCCCCHHHHHHHHHHHHHHHHHHHcCCC--CCceeCHH-HcCC
Confidence 9989999999999999999998 999999999999999999999986 47778776 4443
No 19
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=2.2e-48 Score=339.38 Aligned_cols=208 Identities=23% Similarity=0.379 Sum_probs=184.5
Q ss_pred CcHHHHHhCchHHHHHHHcCCCcc-CcccCcccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhC
Q 027408 1 MRILILVRNFLPGHHQVISGEWNV-AGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETG 79 (223)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~~~w~~-~~~~~~~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g 79 (223)
++||++.|++..+++.+++|.|.+ .. ..+.+|.|++|||||+|.||+.+|++++++|++|++||++.... ... .
T Consensus 111 ~l~L~~~R~~~~~~~~~~~g~w~~~~~--~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~~~-~ 185 (333)
T 1dxy_A 111 TDTLYLLRNMGKVQAQLQAGDYEKAGT--FIGKELGQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKG--DHP-D 185 (333)
T ss_dssp HHHHHHHTTHHHHHHHHHTTCHHHHTC--CCCCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSS--CCT-T
T ss_pred HHHHHHhhhHHHHHHHHHcCCcccccC--CCccCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCcchh--hHh-c
Confidence 479999999999999999999953 22 24679999999999999999999999999999999999976432 122 2
Q ss_pred CeecCCHHhhcccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCCCC
Q 027408 80 AKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQP 159 (223)
Q Consensus 80 ~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~ep 159 (223)
+.. .++++++++||+|++|+|++++|+++++++.++.||+|+++||+|||+++|+++|+++|++|+|.||+||||++||
T Consensus 186 ~~~-~~l~ell~~aDvV~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP 264 (333)
T 1dxy_A 186 FDY-VSLEDLFKQSDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTARPNLIDTQAMLSNLKSGKLAGVGIDTYEYET 264 (333)
T ss_dssp CEE-CCHHHHHHHCSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEESSCTTHH
T ss_pred ccc-CCHHHHHhcCCEEEEcCCCchhHHHHhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCccEEEEecCCCCC
Confidence 343 4899999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred C--C--------CC---CCccCCCCeEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCcceeccCC
Q 027408 160 A--P--------KD---HPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVKAG 216 (223)
Q Consensus 160 ~--~--------~~---~~l~~~~nv~~tPH~a~~t~~~~~~~~~~~~~~i~~~~~g~~~~~~n~~~~~~ 216 (223)
+ + ++ +|||.+|||++|||+|++|.++..++...+++|+.+|++|++ +.|.|+++.
T Consensus 265 ~~~~~~~~~~~~~~~~~~pL~~~~nvi~TPHia~~t~e~~~~~~~~~~~nl~~~~~g~~--~~~~v~~~~ 332 (333)
T 1dxy_A 265 EDLLNLAKHGSFKDPLWDELLGMPNVVLSPHIAYYTETAVHNMVYFSLQHLVDFLTKGE--TSTEVTGPA 332 (333)
T ss_dssp HHHHHHHHHSSCCCHHHHHHHTCTTEEECSSCTTCSHHHHHHHHHHHHHHHHHHHHHSC--CTTEECC--
T ss_pred CcccccccccccCccchhHHhcCCCEEECCccccChHHHHHHHHHHHHHHHHHHHcCCC--CCceeCCCC
Confidence 3 1 12 579999999999999999999999999999999999999986 467787764
No 20
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.7e-47 Score=333.64 Aligned_cols=201 Identities=30% Similarity=0.517 Sum_probs=181.7
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCC
Q 027408 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA 80 (223)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 80 (223)
++||++.|++..+++.+++|.|.+.. ..+.+|.|++|||||+|.||+.+|++++++|++|++||++... +.+...|+
T Consensus 132 ~l~L~~~R~~~~~~~~~~~g~W~~~~--~~~~~l~g~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g~ 208 (335)
T 2g76_A 132 GMIMCLARQIPQATASMKDGKWERKK--FMGTELNGKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISP-EVSASFGV 208 (335)
T ss_dssp HHHHHHHHTHHHHHHHHHTTCCCTGG--GCBCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCH-HHHHHTTC
T ss_pred HHHHHHHhchHHHHHHHHcCCCCccC--CCCcCCCcCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcch-hhhhhcCc
Confidence 47999999999999999999997532 2467999999999999999999999999999999999997643 44556677
Q ss_pred eecCCHHhhcccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCCCCC
Q 027408 81 KFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPA 160 (223)
Q Consensus 81 ~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~ep~ 160 (223)
.. .++++++++||+|++|+|++++|+++++++.++.||+|+++||++||+++|+++|+++|++|++.||+||||+.||
T Consensus 209 ~~-~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~vvd~~aL~~aL~~g~i~gA~lDV~~~EP- 286 (335)
T 2g76_A 209 QQ-LPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEP- 286 (335)
T ss_dssp EE-CCHHHHGGGCSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSS-
T ss_pred ee-CCHHHHHhcCCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCCccccCHHHHHHHHHhCCccEEEEeecCCCC-
Confidence 65 4899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCeEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCC
Q 027408 161 PKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDF 206 (223)
Q Consensus 161 ~~~~~l~~~~nv~~tPH~a~~t~~~~~~~~~~~~~~i~~~~~g~~~ 206 (223)
+.++|||.+||+++|||++++|.++.+++...+++|+.+|++|+++
T Consensus 287 ~~~~~L~~~~nvilTPH~~~~t~e~~~~~~~~~~~nl~~~~~g~~~ 332 (335)
T 2g76_A 287 PRDRALVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVKGKSL 332 (335)
T ss_dssp CSCCHHHHSTTEEECSSCTTCBHHHHHHHHHHHHHHHHHHC-----
T ss_pred CCCchHHhCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 5678999999999999999999999999999999999999999875
No 21
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=100.00 E-value=6.4e-47 Score=331.43 Aligned_cols=213 Identities=27% Similarity=0.394 Sum_probs=191.2
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcc-----cCcccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHH
Q 027408 1 MRILILVRNFLPGHHQVISGEWNVAGV-----AYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLE 75 (223)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~~~w~~~~~-----~~~~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 75 (223)
++||++.|++..+++.+++|.|..... ...+.+|.|++|||||+|.||+.+|++++++|++|++||++... ..+
T Consensus 128 ~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~ 206 (347)
T 1mx3_A 128 CHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSD-GVE 206 (347)
T ss_dssp HHHHHHHHCHHHHHHHHHTTCCCCSHHHHHHHTTTCCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCT-THH
T ss_pred HHHHHHHHhHHHHHHHHHcCCcccccccccccccCccCCCCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcch-hhH
Confidence 479999999999999999999964210 01236899999999999999999999999999999999997643 344
Q ss_pred HhhCCeecCCHHhhcccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCC
Q 027408 76 KETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVW 155 (223)
Q Consensus 76 ~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~ 155 (223)
...|+..+.++++++++||+|++|+|++++|+++++++.++.||+|+++||++||+++|+++|.++|++|+|.||++|||
T Consensus 207 ~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~gA~lDV~ 286 (347)
T 1mx3_A 207 RALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVH 286 (347)
T ss_dssp HHHTCEECSSHHHHHHHCSEEEECCCCCTTCTTSBSHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEESCC
T ss_pred hhcCCeecCCHHHHHhcCCEEEEcCCCCHHHHHHhHHHHHhcCCCCCEEEECCCChHHhHHHHHHHHHhCCCcEEEEeec
Confidence 56677766789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCC-CCCCccCCCCeEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCC-CCcceecc
Q 027408 156 NPQPAP-KDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDF-PVQNYIVK 214 (223)
Q Consensus 156 ~~ep~~-~~~~l~~~~nv~~tPH~a~~t~~~~~~~~~~~~~~i~~~~~g~~~-~~~n~~~~ 214 (223)
+.||.+ .++||+.++|+++|||++++|.++.+++...+++|+.+|++|+++ ++.|.|++
T Consensus 287 ~~EP~~~~~~~L~~~~nvi~tPHia~~t~~~~~~~~~~~~~ni~~~~~g~~~~~l~~~v~~ 347 (347)
T 1mx3_A 287 ESEPFSFSQGPLKDAPNLICTPHAAWYSEQASIEMREEAAREIRRAITGRIPDSLKNCVNK 347 (347)
T ss_dssp SSSSCCTTSSTTTTCSSEEECSSCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTCSSBCC-
T ss_pred ccCCCCCCCchHHhCCCEEEEchHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccCCCCCC
Confidence 999987 478999999999999999999999999999999999999999876 46787763
No 22
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=100.00 E-value=1.3e-47 Score=328.14 Aligned_cols=193 Identities=24% Similarity=0.393 Sum_probs=177.8
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCC
Q 027408 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA 80 (223)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 80 (223)
++||++.|++..+++.+++|.|.+.. ..+|.|+||||||+|.||+.+|++++++|++|++|||++...+. +
T Consensus 91 ~~~L~~~R~~~~~~~~~~~g~w~~~~----~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-----~ 161 (290)
T 3gvx_A 91 ALLLAHAKNILENNELMKAGIFRQSP----TTLLYGKALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQNV-----D 161 (290)
T ss_dssp HHHHHHHTTHHHHHHHHHTTCCCCCC----CCCCTTCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTTC-----S
T ss_pred HHHHHHHHhhhhhhhHhhhcccccCC----ceeeecchheeeccCchhHHHHHHHHhhCcEEEEEecccccccc-----c
Confidence 47999999999999999999998643 36899999999999999999999999999999999998643321 4
Q ss_pred eecCCHHhhcccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCCCCC
Q 027408 81 KFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPA 160 (223)
Q Consensus 81 ~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~ep~ 160 (223)
...+++++++++||+|++|+|++++|+++++++.++.||+|++|||+|||+++|+++|+++|++|++.+|++|||++||+
T Consensus 162 ~~~~~l~ell~~aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ga~lDV~~~EP~ 241 (290)
T 3gvx_A 162 VISESPADLFRQSDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARADVVSKPDMIGFLKERSDVWYLSDVWWNEPE 241 (290)
T ss_dssp EECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTS
T ss_pred cccCChHHHhhccCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeehhcccCCcchhhhhhhccceEEeeccccCCcc
Confidence 45679999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred CCCCCccCCCCeEEccCCC-CCcHHHHHHHHHHHHHHHHHHHcCCC
Q 027408 161 PKDHPWRYMPNQAMTPHVS-GTTIDAQLRYAAGVKDMLDRYFKGED 205 (223)
Q Consensus 161 ~~~~~l~~~~nv~~tPH~a-~~t~~~~~~~~~~~~~~i~~~~~g~~ 205 (223)
+|||.+||+++|||+| ++|.++.+++...+++||.+|++|+-
T Consensus 242 ---~pL~~~~nvilTPHiag~~t~e~~~~~~~~~~~ni~~~~~~~~ 284 (290)
T 3gvx_A 242 ---ITETNLRNAILSPHVAGGMSGEIMDIAIQLAFENVRNFFEGEG 284 (290)
T ss_dssp ---CCSCCCSSEEECCSCSSCBTTBCCHHHHHHHHHHHHHHTC---
T ss_pred ---cchhhhhhhhcCccccCCccchHHHHHHHHHHHHHHhhhcCCC
Confidence 8999999999999999 99999999999999999999999874
No 23
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=5.9e-47 Score=327.00 Aligned_cols=199 Identities=33% Similarity=0.572 Sum_probs=185.0
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCC
Q 027408 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA 80 (223)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 80 (223)
++||++.|++..+++.+++|.|.+.. ..+.+|.|++|||||+|.||+.+|+.++++|++|++||+++.. +.+...|+
T Consensus 109 ~~~L~~~R~~~~~~~~~~~g~w~~~~--~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~~~g~ 185 (307)
T 1wwk_A 109 GLMFSVARKIAFADRKMREGVWAKKE--AMGIELEGKTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNE-ERAKEVNG 185 (307)
T ss_dssp HHHHHHHTTHHHHHHHHTTTCCCTTT--CCBCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHTTC
T ss_pred HHHHHHHhCHHHHHHHHHcCCCCccC--cCCcccCCceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCCh-hhHhhcCc
Confidence 47999999999999999999997422 2467999999999999999999999999999999999997744 45556777
Q ss_pred eecCCHHhhcccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCCCCC
Q 027408 81 KFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPA 160 (223)
Q Consensus 81 ~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~ep~ 160 (223)
... ++++++++||+|++|+|++++|+++++++.++.||+|+++||++||+++|+++|.++|++|++.||++|||+.||.
T Consensus 186 ~~~-~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~ 264 (307)
T 1wwk_A 186 KFV-DLETLLKESDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPVVDTNALVKALKEGWIAGAGLDVFEEEPL 264 (307)
T ss_dssp EEC-CHHHHHHHCSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSC
T ss_pred ccc-CHHHHHhhCCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHHhCCCcEEEEecCCCCCC
Confidence 654 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCeEEccCCCCCcHHHHHHHHHHHHHHHHHHHcC
Q 027408 161 PKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKG 203 (223)
Q Consensus 161 ~~~~~l~~~~nv~~tPH~a~~t~~~~~~~~~~~~~~i~~~~~g 203 (223)
+.++|||.++|+++|||++++|.++..++...+++|+.+|++|
T Consensus 265 ~~~~~L~~~~nviltPh~~~~t~~~~~~~~~~~~~nl~~~~~g 307 (307)
T 1wwk_A 265 PKDHPLTKFDNVVLTPHIGASTVEAQERAGVEVAEKVVKILKG 307 (307)
T ss_dssp CTTCGGGGCTTEEECSSCTTCBHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCChHHhCCCEEECCccccCcHHHHHHHHHHHHHHHHHHHcC
Confidence 8899999999999999999999999999999999999999976
No 24
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=100.00 E-value=3.1e-47 Score=331.92 Aligned_cols=205 Identities=26% Similarity=0.412 Sum_probs=182.2
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCC
Q 027408 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA 80 (223)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 80 (223)
++||++.|++..+++.+++|.|.+.. ...+.++.|++|||||+|.||+.+|++++++|++|++||++.... ... .+
T Consensus 112 ~l~L~~~R~~~~~~~~~~~g~w~~~~-~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~~~-~~ 187 (331)
T 1xdw_A 112 TQAMMLLRHTAYTTSRTAKKNFKVDA-FMFSKEVRNCTVGVVGLGRIGRVAAQIFHGMGATVIGEDVFEIKG--IED-YC 187 (331)
T ss_dssp HHHHHHHTTHHHHHHHHTTTCCCCCS-TTCCCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS--CTT-TC
T ss_pred HHHHHHHhCHHHHHHHHHcCCCcccc-CcCccCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCccHH--HHh-cc
Confidence 47899999999999999999996411 134679999999999999999999999999999999999976433 122 23
Q ss_pred eecCCHHhhcccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCCCCC
Q 027408 81 KFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPA 160 (223)
Q Consensus 81 ~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~ep~ 160 (223)
.. .++++++++||+|++|+|++++|+++++++.++.||+|+++||+|||+++|+++|+++|++|+|.||+||||++||+
T Consensus 188 ~~-~~l~ell~~aDvV~~~~p~t~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~ 266 (331)
T 1xdw_A 188 TQ-VSLDEVLEKSDIITIHAPYIKENGAVVTRDFLKKMKDGAILVNCARGQLVDTEAVIEAVESGKLGGYGCDVLDGEAS 266 (331)
T ss_dssp EE-CCHHHHHHHCSEEEECCCCCTTTCCSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTGGG
T ss_pred cc-CCHHHHHhhCCEEEEecCCchHHHHHhCHHHHhhCCCCcEEEECCCcccccHHHHHHHHHhCCceEEEEecCCCCCC
Confidence 33 48999999999999999999999999999999999999999999999999999999999999999999999999994
Q ss_pred --CCC-------C----CccCC-CCeEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCccee
Q 027408 161 --PKD-------H----PWRYM-PNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYI 212 (223)
Q Consensus 161 --~~~-------~----~l~~~-~nv~~tPH~a~~t~~~~~~~~~~~~~~i~~~~~g~~~~~~n~~ 212 (223)
+.+ + |||.+ |||++|||+|++|.++..++...+++|+.+|++|+++ .|.|
T Consensus 267 ~~~~~~~~~~~~~~~~~~L~~~~~nvilTPHia~~t~~~~~~~~~~~~~nl~~~~~g~~~--~~~v 330 (331)
T 1xdw_A 267 VFGKDLEGQKLENPLFEKLVDLYPRVLITPHLGSYTDEAVKNMVEVSYQNLKDLAETGDC--PNKI 330 (331)
T ss_dssp TTTCCCTTSCCSSHHHHHHHHTTTTEEECCSCTTCSHHHHHHHHHHHHHHHHHHHHHSCC--TTBC
T ss_pred cccccccccccCccchHHHHhCCCCEEEcCccccChHHHHHHHHHHHHHHHHHHHcCCCC--CCCC
Confidence 322 3 79999 9999999999999999999999999999999999864 4544
No 25
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=2.4e-46 Score=324.88 Aligned_cols=203 Identities=27% Similarity=0.402 Sum_probs=186.2
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCc-ccCcccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcC-CCCChhHHHhh
Q 027408 1 MRILILVRNFLPGHHQVISGEWNVAG-VAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDR-VKMDPQLEKET 78 (223)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~~~w~~~~-~~~~~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~-~~~~~~~~~~~ 78 (223)
++||++.|++..+++.+++|.|.... ....+.++.|++|||||+|.||+.+|++++++|++|++||+ ++.. +.+...
T Consensus 110 ~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~~ 188 (320)
T 1gdh_A 110 LLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASS-SDEASY 188 (320)
T ss_dssp HHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCH-HHHHHH
T ss_pred HHHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcCh-hhhhhc
Confidence 47999999999999999999996321 12346799999999999999999999999999999999999 7643 445567
Q ss_pred CCeecCCHHhhcccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCCC
Q 027408 79 GAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQ 158 (223)
Q Consensus 79 g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~e 158 (223)
|+....++++++++||+|++|+|.+++|.++++++.++.||+|+++||++||+++|+++|.++|++|++.||++|||+.|
T Consensus 189 g~~~~~~l~ell~~aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn~arg~~vd~~aL~~aL~~g~i~gA~lDv~~~e 268 (320)
T 1gdh_A 189 QATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLAYAGFDVFAGE 268 (320)
T ss_dssp TCEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTT
T ss_pred CcEEcCCHHHHHhhCCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 77766689999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCCCeEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCC
Q 027408 159 PAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDF 206 (223)
Q Consensus 159 p~~~~~~l~~~~nv~~tPH~a~~t~~~~~~~~~~~~~~i~~~~~g~~~ 206 (223)
| +.++|||.++|+++|||++++|.++..++...+ +|+.+|++|+++
T Consensus 269 P-~~~~~L~~~~nviltPH~~~~t~~~~~~~~~~~-~nl~~~~~g~~~ 314 (320)
T 1gdh_A 269 P-NINEGYYDLPNTFLFPHIGSAATQAREDMAHQA-NDLIDALFGGAD 314 (320)
T ss_dssp T-SCCTTGGGCTTEEECSSCTTCBHHHHHHHHHHH-HHHHHHHHTTSC
T ss_pred C-CCCChhhhCCCEEECCcCCcCcHHHHHHHHHHH-HHHHHHHcCCCC
Confidence 9 788999999999999999999999999999999 999999999875
No 26
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=100.00 E-value=2e-46 Score=324.43 Aligned_cols=199 Identities=23% Similarity=0.344 Sum_probs=184.6
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCC
Q 027408 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA 80 (223)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 80 (223)
++||++.|++..+++.+++|.|.. ..+.++.|++|||||+|.||+.+|+.++++|++|++||+++.. ..+...|+
T Consensus 111 ~~~L~~~R~~~~~~~~~~~g~w~~----~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~~~g~ 185 (313)
T 2ekl_A 111 GLMIAAARKMYTSMALAKSGIFKK----IEGLELAGKTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDIR-EKAEKINA 185 (313)
T ss_dssp HHHHHHHHTHHHHHHHHHTTCCCC----CCCCCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHTTC
T ss_pred HHHHHHHhCHHHHHHHHHcCCCCC----CCCCCCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcch-hHHHhcCc
Confidence 479999999999999999999962 2467899999999999999999999999999999999997643 34556677
Q ss_pred eecCCHHhhcccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCCCCC
Q 027408 81 KFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPA 160 (223)
Q Consensus 81 ~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~ep~ 160 (223)
... ++++++++||+|++|+|++++|.++++++.++.||+|+++||++||+++|+++|.++|++|++.||++|||+.||+
T Consensus 186 ~~~-~l~ell~~aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~ 264 (313)
T 2ekl_A 186 KAV-SLEELLKNSDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRAVAVNGKALLDYIKKGKVYAYATDVFWNEPP 264 (313)
T ss_dssp EEC-CHHHHHHHCSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCGGGBCHHHHHHHHHTTCEEEEEESCCSSSSC
T ss_pred eec-CHHHHHhhCCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCCcEEEEecCCCCCC
Confidence 654 8999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCC---CccCCCCeEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCC
Q 027408 161 PKDH---PWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDF 206 (223)
Q Consensus 161 ~~~~---~l~~~~nv~~tPH~a~~t~~~~~~~~~~~~~~i~~~~~g~~~ 206 (223)
+ ++ |||.+||+++|||++++|.++.+++...+++|+.+|++|+|+
T Consensus 265 ~-~~~~~~L~~~~nviltPH~~~~t~~~~~~~~~~~~~n~~~~~~g~~l 312 (313)
T 2ekl_A 265 K-EEWELELLKHERVIVTTHIGAQTKEAQKRVAEMTTQNLLNAMKELGM 312 (313)
T ss_dssp C-SHHHHHHHHSTTEEECCSCTTCSHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred C-CcccchHhhCCCEEECCccCcCcHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 8 56 999999999999999999999999999999999999999874
No 27
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=100.00 E-value=8.6e-46 Score=320.23 Aligned_cols=202 Identities=32% Similarity=0.542 Sum_probs=183.7
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCc-ccCcccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhC
Q 027408 1 MRILILVRNFLPGHHQVISGEWNVAG-VAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETG 79 (223)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~~~w~~~~-~~~~~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g 79 (223)
++||++.|++..+++.+++|.|.... ....+.++.|++|||||+|.||+.+|++++++|++|++|||+.....
T Consensus 108 ~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~------ 181 (311)
T 2cuk_A 108 ALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQGLTLGLVGMGRIGQAVAKRALAFGMRVVYHARTPKPLP------ 181 (311)
T ss_dssp HHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSS------
T ss_pred HHHHHHHcChHHHHHHHHcCCCCccccccccCcCCCCCEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCcccc------
Confidence 47999999999999999999996321 11236799999999999999999999999999999999999764332
Q ss_pred CeecCCHHhhcccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCCCC
Q 027408 80 AKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQP 159 (223)
Q Consensus 80 ~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~ep 159 (223)
+. ..++++++++||+|++|+|++++|.++++++.++.||+++++||++||+++|+++|.++|+ |++.||++|||+.||
T Consensus 182 ~~-~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~-g~i~ga~lDv~~~eP 259 (311)
T 2cuk_A 182 YP-FLSLEELLKEADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTARGALVDTEALVEALR-GHLFGAGLDVTDPEP 259 (311)
T ss_dssp SC-BCCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHT-TTSSEEEESSCSSSS
T ss_pred cc-cCCHHHHHhhCCEEEEeCCCChHHHhhcCHHHHhhCCCCcEEEECCCCCccCHHHHHHHHh-CcCCEEEEeeCCCCC
Confidence 22 4589999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred CCCCCCccCCCCeEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCccee
Q 027408 160 APKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYI 212 (223)
Q Consensus 160 ~~~~~~l~~~~nv~~tPH~a~~t~~~~~~~~~~~~~~i~~~~~g~~~~~~n~~ 212 (223)
++.++|||.++|+++|||++++|.++..++...+++|+.+|++|+++ .|.|
T Consensus 260 ~~~~~~L~~~~nviltPh~~~~t~~~~~~~~~~~~~nl~~~~~g~~~--~~~v 310 (311)
T 2cuk_A 260 LPPGHPLYALPNAVITPHIGSAGRTTRERMAEVAVENLLAVLEGREP--PNPV 310 (311)
T ss_dssp CCTTSGGGGCTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHTTCCC--SSBC
T ss_pred CCCCChhhhCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHHcCCCC--CCcc
Confidence 99999999999999999999999999999999999999999999864 4544
No 28
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=100.00 E-value=2.5e-45 Score=319.83 Aligned_cols=203 Identities=25% Similarity=0.412 Sum_probs=185.0
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCC
Q 027408 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA 80 (223)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 80 (223)
++||++.|++..+++.+++|.|.... ...+.+|.|++|||||+|.||+.+|+.++++|++|++||+++.... ++
T Consensus 130 ~l~L~~~R~~~~~~~~~~~g~w~~~~-~~~~~~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~~~~-----g~ 203 (333)
T 3ba1_A 130 GLILAVLRRICECDKYVRRGAWKFGD-FKLTTKFSGKRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKKPNT-----NY 203 (333)
T ss_dssp HHHHHHHTTHHHHHHHHHTTGGGGCC-CCCCCCCTTCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSCCTTC-----CS
T ss_pred HHHHHHHhCHHHHHHHHHcCCCCccc-cccccccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCchhcc-----Cc
Confidence 47999999999999999999997432 1236799999999999999999999999999999999999764321 55
Q ss_pred eecCCHHhhcccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCCCCC
Q 027408 81 KFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPA 160 (223)
Q Consensus 81 ~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~ep~ 160 (223)
....++++++++||+|++|+|.+++|+++++++.++.||++++|||++||.++|+++|.++|++|++.+|++|||++||.
T Consensus 204 ~~~~~l~ell~~aDvVil~vP~~~~t~~li~~~~l~~mk~gailIn~srG~~vd~~aL~~aL~~g~i~ga~lDv~~~EP~ 283 (333)
T 3ba1_A 204 TYYGSVVELASNSDILVVACPLTPETTHIINREVIDALGPKGVLINIGRGPHVDEPELVSALVEGRLGGAGLDVFEREPE 283 (333)
T ss_dssp EEESCHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEEECSCGGGBCHHHHHHHHHHTSSCEEEESCCTTTTC
T ss_pred eecCCHHHHHhcCCEEEEecCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHcCCCeEEEEecCCCCCC
Confidence 55678999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCccCCCCeEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCccee
Q 027408 161 PKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYI 212 (223)
Q Consensus 161 ~~~~~l~~~~nv~~tPH~a~~t~~~~~~~~~~~~~~i~~~~~g~~~~~~n~~ 212 (223)
+. +|||.++||++|||++++|.++..++...+++|+.+|++|+++ .|.|
T Consensus 284 ~~-~~L~~~~nviltPH~~~~t~e~~~~~~~~~~~nl~~~~~g~~~--~~~V 332 (333)
T 3ba1_A 284 VP-EKLFGLENVVLLPHVGSGTVETRKVMADLVVGNLEAHFSGKPL--LTPV 332 (333)
T ss_dssp CC-GGGGGCTTEEECSSCTTCSHHHHHHHHHHHHHHHHHHHHTCCC--SSBC
T ss_pred Cc-chhhcCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHHcCCCC--CCCC
Confidence 76 8999999999999999999999999999999999999999875 4444
No 29
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=100.00 E-value=4.8e-45 Score=320.03 Aligned_cols=212 Identities=25% Similarity=0.336 Sum_probs=190.2
Q ss_pred CcHHHHHhCchHHHHHHHcCC---CccCc--ccCcccCCCCCEEEEEcccHHHHHHHHHHc-cCCCeEEEEcCCCCChhH
Q 027408 1 MRILILVRNFLPGHHQVISGE---WNVAG--VAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQL 74 (223)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~~~---w~~~~--~~~~~~~l~g~~igIiG~G~iG~~iA~~l~-~~G~~V~~~d~~~~~~~~ 74 (223)
++||+++|++..+++.+++|. |.... ....+.+|.|++|||||+|.||+.+|+.++ ++|++|++||+++...+.
T Consensus 123 ~l~L~~~R~~~~~~~~~~~g~~~~w~~~~~~~~~~~~~l~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~ 202 (348)
T 2w2k_A 123 YLILSVFRLASYSERAARTGDPETFNRVHLEIGKSAHNPRGHVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAET 202 (348)
T ss_dssp HHHHHHHHTHHHHHHHHTTCCHHHHHHHHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHH
T ss_pred HHHHHHHhChHHHHHHHHcCCCcccccccccccccCcCCCCCEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhh
Confidence 479999999999999999999 94211 012357899999999999999999999999 999999999998765555
Q ss_pred HHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeC
Q 027408 75 EKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDV 154 (223)
Q Consensus 75 ~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv 154 (223)
+.+.++....++++++++||+|++|+|.+++|+++++++.++.||++++|||++||+++|+++|.++|++|++.||++||
T Consensus 203 ~~~~g~~~~~~l~ell~~aDvVil~vp~~~~t~~li~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~~~i~gaglDv 282 (348)
T 2w2k_A 203 EKALGAERVDSLEELARRSDCVSVSVPYMKLTHHLIDEAFFAAMKPGSRIVNTARGPVISQDALIAALKSGKLLSAGLDV 282 (348)
T ss_dssp HHHHTCEECSSHHHHHHHCSEEEECCCCSGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESS
T ss_pred HhhcCcEEeCCHHHHhccCCEEEEeCCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHhCCceEEEecc
Confidence 55667776668999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCccCCCCeEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCcceeccC
Q 027408 155 WNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVKA 215 (223)
Q Consensus 155 ~~~ep~~~~~~l~~~~nv~~tPH~a~~t~~~~~~~~~~~~~~i~~~~~g~~~~~~n~~~~~ 215 (223)
|++|| ..++||+.++||++|||+++.|.++..++...+++||.+|++|+++ .|.|+++
T Consensus 283 ~~~EP-~~~~~L~~~~nviltPH~~~~t~e~~~~~~~~~~~ni~~~~~g~~~--~~~v~~~ 340 (348)
T 2w2k_A 283 HEFEP-QVSKELIEMKHVTLTTHIGGVAIETFHEFERLTMTNIDRFLLQGKP--LLTPAGK 340 (348)
T ss_dssp CTTTT-SCCHHHHTSSSEEECCSCTTCSHHHHHHHHHHHHHHHHHHHHTCCC--CSSBCSC
T ss_pred CCCCC-CCCchhhcCCCEEEcCcCCCCCHHHHHHHHHHHHHHHHHHHcCCCC--cceeccc
Confidence 99998 6677899999999999999999999999999999999999999863 5556544
No 30
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=100.00 E-value=3.2e-44 Score=312.81 Aligned_cols=210 Identities=28% Similarity=0.432 Sum_probs=190.9
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccC-cccCcccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhC
Q 027408 1 MRILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETG 79 (223)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~~~w~~~-~~~~~~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g 79 (223)
++||++.|++..+++.+++|.|... .....+.++.|++|||||+|.||+.+|+.++++|++|++||++....+.....+
T Consensus 119 ~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g 198 (330)
T 2gcg_A 119 SLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQ 198 (330)
T ss_dssp HHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCCTTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTT
T ss_pred HHHHHHHhCHHHHHHHHHcCCCcccCcccccCcCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcC
Confidence 4799999999999999999999642 112346799999999999999999999999999999999999765555555567
Q ss_pred CeecCCHHhhcccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCCCC
Q 027408 80 AKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQP 159 (223)
Q Consensus 80 ~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~ep 159 (223)
+... ++++++++||+|++|+|.+++|+++++++.++.||+++++||++||+++|+++|.++|++|++.|+++|||++||
T Consensus 199 ~~~~-~l~e~l~~aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~ep 277 (330)
T 2gcg_A 199 AEFV-STPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPEP 277 (330)
T ss_dssp CEEC-CHHHHHHHCSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSS
T ss_pred ceeC-CHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHcCCccEEEeCCCCCCC
Confidence 7665 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccCCCCeEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCcceec
Q 027408 160 APKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIV 213 (223)
Q Consensus 160 ~~~~~~l~~~~nv~~tPH~a~~t~~~~~~~~~~~~~~i~~~~~g~~~~~~n~~~ 213 (223)
++.++||+.++||++|||+|+.|.++..++...+++|+.+|++|+++ .|.|+
T Consensus 278 l~~~~~l~~~~nvi~tPh~~~~t~~~~~~~~~~~~~n~~~~~~g~~~--~~~v~ 329 (330)
T 2gcg_A 278 LPTNHPLLTLKNCVILPHIGSATHRTRNTMSLLAANNLLAGLRGEPM--PSELK 329 (330)
T ss_dssp CCTTCGGGGCTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHHTCCC--TTEEC
T ss_pred CCCCChhhcCCCEEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCC--CCCCC
Confidence 99999999999999999999999999999999999999999999874 55554
No 31
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.7e-44 Score=314.81 Aligned_cols=208 Identities=32% Similarity=0.545 Sum_probs=186.9
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcccCcc----cCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHH
Q 027408 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRA----YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEK 76 (223)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~~~w~~~~~~~~~----~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~ 76 (223)
++||++.|++..+++.+++|.|........+ .+|.|++|||||+|.||+.+|+.++++|++|++||+++.. +.+.
T Consensus 107 ~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~~-~~~~ 185 (333)
T 2d0i_A 107 GLIINLMRKIHYADKFIRRGEWESHAKIWTGFKRIESLYGKKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRKV-NVEK 185 (333)
T ss_dssp HHHHHHHHCHHHHHHHHHTTCCCCHHHHHTTSCCCCCSTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCH-HHHH
T ss_pred HHHHHHHhHHHHHHHHHHcCCCCcCcccccCCcccCCCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcch-hhhh
Confidence 4799999999999999999999631101124 6899999999999999999999999999999999998743 4445
Q ss_pred hhCCeecCCHHhhcccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCC
Q 027408 77 ETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWN 156 (223)
Q Consensus 77 ~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~ 156 (223)
..|+... ++++++++||+|++|+|.+++|+++++++.++.||++ ++||++||.++|+++|.++|+++++.||++|||+
T Consensus 186 ~~g~~~~-~l~e~l~~aDiVil~vp~~~~t~~~i~~~~~~~mk~g-ilin~srg~~vd~~aL~~aL~~~~i~gaglDv~~ 263 (333)
T 2d0i_A 186 ELKARYM-DIDELLEKSDIVILALPLTRDTYHIINEERVKKLEGK-YLVNIGRGALVDEKAVTEAIKQGKLKGYATDVFE 263 (333)
T ss_dssp HHTEEEC-CHHHHHHHCSEEEECCCCCTTTTTSBCHHHHHHTBTC-EEEECSCGGGBCHHHHHHHHHTTCBCEEEESCCS
T ss_pred hcCceec-CHHHHHhhCCEEEEcCCCChHHHHHhCHHHHhhCCCC-EEEECCCCcccCHHHHHHHHHcCCceEEEecCCC
Confidence 5676654 8999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCCCCCccCCC-CeEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCcceecc
Q 027408 157 PQPAPKDHPWRYMP-NQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVK 214 (223)
Q Consensus 157 ~ep~~~~~~l~~~~-nv~~tPH~a~~t~~~~~~~~~~~~~~i~~~~~g~~~~~~n~~~~ 214 (223)
+||.+ ++||+.++ |+++|||+++.|.++..++...+++|+.+|++|+++ .|.|++
T Consensus 264 ~EP~~-~~~L~~~~~nviltPh~~~~t~~~~~~~~~~~~~n~~~~~~g~~~--~~~v~~ 319 (333)
T 2d0i_A 264 KEPVR-EHELFKYEWETVLTPHYAGLALEAQEDVGFRAVENLLKVLRGEVP--EDLVNK 319 (333)
T ss_dssp SSSCS-CCGGGGCTTTEEECCSCTTCCHHHHHHHHHHHHHHHHHHHTTCCC--TTBSCT
T ss_pred CCCCC-CchHHcCCCCEEEcCccCCCcHHHHHHHHHHHHHHHHHHHcCCCC--cCccCH
Confidence 99988 89999999 999999999999999999999999999999999864 455554
No 32
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=100.00 E-value=4.8e-44 Score=312.16 Aligned_cols=209 Identities=33% Similarity=0.543 Sum_probs=188.0
Q ss_pred CcHHHHHhCchHHHHHHHcCCCc----cC-cccCcccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHH
Q 027408 1 MRILILVRNFLPGHHQVISGEWN----VA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLE 75 (223)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~~~w~----~~-~~~~~~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 75 (223)
++||++.|++..+++.+++|.|. .. .....+.+|.|++|||||+|.||+.+|+.++++|++|++||++... +..
T Consensus 110 ~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~ 188 (334)
T 2dbq_A 110 ALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKE-EVE 188 (334)
T ss_dssp HHHHHHHHTHHHHHHHHHTSHHHHTTCCCCTTTTCCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHH
T ss_pred HHHHHHHhCHHHHHHHHHcCCCcccccccccccccccCCCCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcch-hhH
Confidence 47999999999999999999996 11 1122367899999999999999999999999999999999998744 444
Q ss_pred HhhCCeecCCHHhhcccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCC
Q 027408 76 KETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVW 155 (223)
Q Consensus 76 ~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~ 155 (223)
...|+.. .++++++++||+|++|+|.+++|+++++++.++.||+++++||++||.++|+++|.++|++|++.||++|||
T Consensus 189 ~~~g~~~-~~l~~~l~~aDvVil~vp~~~~t~~~i~~~~~~~mk~~ailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~ 267 (334)
T 2dbq_A 189 RELNAEF-KPLEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVF 267 (334)
T ss_dssp HHHCCEE-CCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCC
T ss_pred hhcCccc-CCHHHHHhhCCEEEECCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCeeEEEecCC
Confidence 5567765 489999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCccCCCCeEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCcceecc
Q 027408 156 NPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVK 214 (223)
Q Consensus 156 ~~ep~~~~~~l~~~~nv~~tPH~a~~t~~~~~~~~~~~~~~i~~~~~g~~~~~~n~~~~ 214 (223)
++|| +.++||+.++||++|||+++.|.++..++...+++|+.+|++|+++ .|.|+.
T Consensus 268 ~~EP-~~~~~L~~~~~vi~tPh~~~~t~~~~~~~~~~~~~n~~~~~~g~~~--~~~v~~ 323 (334)
T 2dbq_A 268 EEEP-YYNEELFKLDNVVLTPHIGSASFGAREGMAELVAKNLIAFKRGEIP--PTLVNR 323 (334)
T ss_dssp SSSS-CCCHHHHHCTTEEECSSCTTCSHHHHHHHHHHHHHHHHHHHTTCCC--TTBSCT
T ss_pred CCCC-CCCchhhcCCCEEECCccCCCcHHHHHHHHHHHHHHHHHHHcCCCC--ccccCH
Confidence 9999 7788999999999999999999999999999999999999999875 455553
No 33
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=100.00 E-value=1.8e-41 Score=311.90 Aligned_cols=208 Identities=31% Similarity=0.513 Sum_probs=190.0
Q ss_pred CcHHHHHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCC
Q 027408 1 MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA 80 (223)
Q Consensus 1 ~~~l~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 80 (223)
++||+++|++..+++.+++|.|.+.. +.+.+|.|++|||||+|.||+++|+.++++|++|++||++. ..+.+...|+
T Consensus 109 ~~~l~~~R~~~~~~~~~~~g~w~~~~--~~~~~l~g~~vgIIG~G~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~ 185 (529)
T 1ygy_A 109 ALLLAASRQIPAADASLREHTWKRSS--FSGTEIFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYV-SPARAAQLGI 185 (529)
T ss_dssp HHHHHHHTTHHHHHHHHHTTCCCGGG--CCBCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTS-CHHHHHHHTC
T ss_pred HHHHHHHhhhHHHHHHHHhCCCcccC--cCccccCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEECCCC-ChhHHHhcCc
Confidence 47999999999999999999997543 34679999999999999999999999999999999999976 3455666788
Q ss_pred eecCCHHhhcccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCCCCC
Q 027408 81 KFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPA 160 (223)
Q Consensus 81 ~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~ep~ 160 (223)
... ++++++++||+|++|+|.+++|.++++++.++.||+|+++||++||.++|+++|.++|++|++.||++|||+.||.
T Consensus 186 ~~~-~l~e~~~~aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ilin~arg~iv~~~aL~~al~~g~i~ga~lDv~~~eP~ 264 (529)
T 1ygy_A 186 ELL-SLDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEPC 264 (529)
T ss_dssp EEC-CHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTSSEEEEEESSCSSSSC
T ss_pred EEc-CHHHHHhcCCEEEECCCCchHHHHHhCHHHHhCCCCCCEEEECCCCchhhHHHHHHHHHcCCccEEEEeeccCCCC
Confidence 765 8999999999999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred CCCCCccCCCCeEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCcceeccC
Q 027408 161 PKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVKA 215 (223)
Q Consensus 161 ~~~~~l~~~~nv~~tPH~a~~t~~~~~~~~~~~~~~i~~~~~g~~~~~~n~~~~~ 215 (223)
.++|||.++|+++|||++++|.++.+++...+++++.+|+.|++. .|.++..
T Consensus 265 -~~~~L~~~~~vilTPh~~~~t~ea~~~~~~~~~~~l~~~l~~~~~--~~~v~~~ 316 (529)
T 1ygy_A 265 -TDSPLFELAQVVVTPHLGASTAEAQDRAGTDVAESVRLALAGEFV--PDAVNVG 316 (529)
T ss_dssp -SCCGGGGCTTEEECSSCSSCBHHHHHHHHHHHHHHHHHHHTTCCC--TTBCSCC
T ss_pred -CCchHHhCCCEEEccccCCCCHHHHHHHHHHHHHHHHHHHcCCCC--CcccCCc
Confidence 588999999999999999999999999999999999999999864 4555544
No 34
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=100.00 E-value=2.3e-42 Score=304.53 Aligned_cols=168 Identities=24% Similarity=0.426 Sum_probs=152.1
Q ss_pred ccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChh----h
Q 027408 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEK----T 106 (223)
Q Consensus 31 ~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~----t 106 (223)
+.+|.|++|||||+|.||+.+|++++++|++|++||++. +. ...+. ...++++++++||+|++|+|++++ |
T Consensus 114 g~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~---~~-~~~~~-~~~sl~ell~~aDiV~l~~Plt~~g~~~T 188 (381)
T 3oet_A 114 GFSLRDRTIGIVGVGNVGSRLQTRLEALGIRTLLCDPPR---AA-RGDEG-DFRTLDELVQEADVLTFHTPLYKDGPYKT 188 (381)
T ss_dssp TCCGGGCEEEEECCSHHHHHHHHHHHHTTCEEEEECHHH---HH-TTCCS-CBCCHHHHHHHCSEEEECCCCCCSSTTCC
T ss_pred CCccCCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCh---HH-hccCc-ccCCHHHHHhhCCEEEEcCcCCccccccc
Confidence 357999999999999999999999999999999999842 11 11222 356899999999999999999999 9
Q ss_pred hhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCCCCCCCCCCccCCCCeEEccCCCCCcHHHH
Q 027408 107 RGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQ 186 (223)
Q Consensus 107 ~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~ep~~~~~~l~~~~nv~~tPH~a~~t~~~~ 186 (223)
+++++++.++.||+|+++||+|||+++|+++|+++|++|++.||+||||++||++. ++||.++ +++|||+||+|.|+.
T Consensus 189 ~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDV~e~EP~~~-~~L~~~~-~i~TPHiag~t~e~~ 266 (381)
T 3oet_A 189 LHLADETLIRRLKPGAILINACRGPVVDNAALLARLNAGQPLSVVLDVWEGEPDLN-VALLEAV-DIGTSHIAGYTLEGK 266 (381)
T ss_dssp TTSBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTTTTSCC-HHHHHHS-SEECSSCTTCCHHHH
T ss_pred hhhcCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCCeEEEeeccccCCCCc-chhhhCC-EEECCccCcCcHHHH
Confidence 99999999999999999999999999999999999999999999999999999875 4688764 899999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCC
Q 027408 187 LRYAAGVKDMLDRYFKGED 205 (223)
Q Consensus 187 ~~~~~~~~~~i~~~~~g~~ 205 (223)
.++...+++|+.+|+++.+
T Consensus 267 ~~~~~~~~~~l~~~l~~~~ 285 (381)
T 3oet_A 267 ARGTTQVFEAYSAFIGREQ 285 (381)
T ss_dssp HHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHcCCc
Confidence 9999999999999998853
No 35
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=100.00 E-value=9.4e-41 Score=294.77 Aligned_cols=167 Identities=27% Similarity=0.464 Sum_probs=152.4
Q ss_pred cCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChh----hh
Q 027408 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEK----TR 107 (223)
Q Consensus 32 ~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~----t~ 107 (223)
.+|.|++|||||+|+||+.+|++++++|++|++||++.. . ...+.. ..++++++++||+|++|+|++++ |.
T Consensus 112 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~---~-~~~g~~-~~~l~ell~~aDvV~l~~Plt~~g~~~T~ 186 (380)
T 2o4c_A 112 ADLAERTYGVVGAGQVGGRLVEVLRGLGWKVLVCDPPRQ---A-REPDGE-FVSLERLLAEADVISLHTPLNRDGEHPTR 186 (380)
T ss_dssp CCGGGCEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHH---H-HSTTSC-CCCHHHHHHHCSEEEECCCCCSSSSSCCT
T ss_pred cccCCCEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCChh---h-hccCcc-cCCHHHHHHhCCEEEEeccCccccccchh
Confidence 479999999999999999999999999999999998531 1 123433 46899999999999999999999 99
Q ss_pred hcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCCCCCCCCCCccCCCCeEEccCCCCCcHHHHH
Q 027408 108 GMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQL 187 (223)
Q Consensus 108 ~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~ep~~~~~~l~~~~nv~~tPH~a~~t~~~~~ 187 (223)
++++++.++.||+|+++||+|||+++|+++|+++|++|+|.+|+||||++||.+. ++|+. +|+++|||+||+|.++..
T Consensus 187 ~li~~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~~g~i~~A~LDV~~~EP~~~-~~l~~-~nvi~TPHiag~t~e~~~ 264 (380)
T 2o4c_A 187 HLLDEPRLAALRPGTWLVNASRGAVVDNQALRRLLEGGADLEVALDVWEGEPQAD-PELAA-RCLIATPHIAGYSLEGKL 264 (380)
T ss_dssp TSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTTTTSCC-HHHHT-TCSEECSSCTTCCHHHHH
T ss_pred hhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCceEEeeeeccCCCCc-hhhcc-CCEEEccccCcCCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999654 56776 599999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCC
Q 027408 188 RYAAGVKDMLDRYFKGED 205 (223)
Q Consensus 188 ~~~~~~~~~i~~~~~g~~ 205 (223)
++...+.+|+.+|++|++
T Consensus 265 ~~~~~~~~nl~~~l~g~~ 282 (380)
T 2o4c_A 265 RGTAQIYQAYCAWRGIAE 282 (380)
T ss_dssp HHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHHcCCC
Confidence 999999999999999985
No 36
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=99.97 E-value=1.3e-31 Score=242.10 Aligned_cols=186 Identities=15% Similarity=0.164 Sum_probs=159.8
Q ss_pred HHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCC
Q 027408 6 LVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEED 85 (223)
Q Consensus 6 ~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~ 85 (223)
+.|++....+.+++| |.+. .+.++.|++|||||+|.||+.+|++++++|++|++||+++.....+...|+.. .+
T Consensus 232 l~r~~~~~~~~l~~g-w~r~----~~~~l~GktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~~-~~ 305 (479)
T 1v8b_A 232 KYDNVYGCRHSLPDG-LMRA----TDFLISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNV-VT 305 (479)
T ss_dssp TTHHHHHHHHHHHHH-HHHH----HCCCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEE-CC
T ss_pred HHhchHhHHHHHhhh-hhhc----cccccCCCEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCCEe-cC
Confidence 457777777888888 8642 35689999999999999999999999999999999999763322344556654 58
Q ss_pred HHhhcccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCc-cCHHHHHH--HHHhCCccEEEeeCCCCCCCCC
Q 027408 86 LDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAI-MDTQAVVD--ACSSGHIAGYSGDVWNPQPAPK 162 (223)
Q Consensus 86 l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~-vd~~al~~--~L~~g~i~~a~lDv~~~ep~~~ 162 (223)
+++++++||+|++|+ .|.++++++.++.||+|++|||++||.+ ||+++|.+ +|++|+|. +++||| |++.
T Consensus 306 l~ell~~aDiVi~~~----~t~~lI~~~~l~~MK~gailiNvgrg~~EId~~aL~~~~AL~~g~I~-a~lDv~---plp~ 377 (479)
T 1v8b_A 306 LDEIVDKGDFFITCT----GNVDVIKLEHLLKMKNNAVVGNIGHFDDEIQVNELFNYKGIHIENVK-PQVDRI---TLPN 377 (479)
T ss_dssp HHHHTTTCSEEEECC----SSSSSBCHHHHTTCCTTCEEEECSSTTTSBCHHHHHTSTTCEEEEEE-TTEEEE---ECTT
T ss_pred HHHHHhcCCEEEECC----ChhhhcCHHHHhhcCCCcEEEEeCCCCccccchhhhccccceeeeEe-eeEEEE---ECCC
Confidence 999999999999995 5788999999999999999999999999 99999999 99999999 899998 4455
Q ss_pred CCCccCC--CCeEEccCCC-CCcHH-HHHHHHHHHHHHHHHHHcCC--CC
Q 027408 163 DHPWRYM--PNQAMTPHVS-GTTID-AQLRYAAGVKDMLDRYFKGE--DF 206 (223)
Q Consensus 163 ~~~l~~~--~nv~~tPH~a-~~t~~-~~~~~~~~~~~~i~~~~~g~--~~ 206 (223)
++|+|.+ +|+++| |+| +.+.+ ...+++..+++|+..|++|+ ++
T Consensus 378 ~~~l~~l~~~nvv~t-H~atghp~e~~~~s~a~~~~~ni~~~~~g~~~~l 426 (479)
T 1v8b_A 378 GNKIIVLARGRLLNL-GCATGHPAFVMSFSFCNQTFAQLDLWQNKDTNKY 426 (479)
T ss_dssp SCEEEEEGGGSBHHH-HSSCCSCHHHHHHHHHHHHHHHHHHHHTTTSSSC
T ss_pred CCeeeEecCCCEEEE-eccCCCCchhHHHHHHHHHHHHHHHHHcCCCCcC
Confidence 7899988 999999 999 66766 67788889999999999998 65
No 37
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=99.97 E-value=7e-32 Score=244.64 Aligned_cols=185 Identities=14% Similarity=0.165 Sum_probs=154.7
Q ss_pred HHhCchHHHHHHHcCCCccCcccCcccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCC
Q 027408 6 LVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEED 85 (223)
Q Consensus 6 ~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~ 85 (223)
+.|++....+.+++| |.+ ..+.++.|++|||||+|.||+.+|++++++|++|++||+++.....+...|+.. .+
T Consensus 252 l~r~~~~~~~~l~~g-w~~----~~g~~L~GktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~~-~~ 325 (494)
T 3d64_A 252 KFDNLYGCRESLVDG-IKR----ATDVMIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRV-VT 325 (494)
T ss_dssp HHHHHHHHHTTHHHH-HHH----HHCCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCEE-CC
T ss_pred HHhhhHhhhhhhhhh-hhh----ccccccCCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCEe-CC
Confidence 446666666666666 753 235689999999999999999999999999999999999763222333456654 48
Q ss_pred HHhhcccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCc-cCHHHHHHHHHhCCccEEEeeCCCCCCCCCCC
Q 027408 86 LDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAI-MDTQAVVDACSSGHIAGYSGDVWNPQPAPKDH 164 (223)
Q Consensus 86 l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~-vd~~al~~~L~~g~i~~a~lDv~~~ep~~~~~ 164 (223)
+++++++||+|++|+ .|.++++++.++.||+|++|||++||++ ||+++| ++|++|+|. +++|+| |++.++
T Consensus 326 l~ell~~aDiVi~~~----~t~~lI~~~~l~~MK~gAilINvgrg~veID~~aL-~AL~~g~I~-~~~Dv~---plp~~~ 396 (494)
T 3d64_A 326 MEYAADKADIFVTAT----GNYHVINHDHMKAMRHNAIVCNIGHFDSEIDVAST-RQYQWENIK-PQVDHI---IFPDGK 396 (494)
T ss_dssp HHHHTTTCSEEEECS----SSSCSBCHHHHHHCCTTEEEEECSSSSCSBCCGGG-TTSEEEEEE-TTEEEE---ECTTSC
T ss_pred HHHHHhcCCEEEECC----CcccccCHHHHhhCCCCcEEEEcCCCcchhchHHH-HhhhcCccc-eeEEEE---ECCCCC
Confidence 999999999999998 4788999999999999999999999999 699999 999999998 556654 777789
Q ss_pred CccCC--CCeEEccCCC-CCcHH-HHHHHHHHHHHHHHHHHcCCCC
Q 027408 165 PWRYM--PNQAMTPHVS-GTTID-AQLRYAAGVKDMLDRYFKGEDF 206 (223)
Q Consensus 165 ~l~~~--~nv~~tPH~a-~~t~~-~~~~~~~~~~~~i~~~~~g~~~ 206 (223)
|||.+ +|+++| |+| +.+.+ ...+++..+++|+..|++|+++
T Consensus 397 pL~~l~~~nvv~t-H~atg~~~~~~~~~~a~~~~~ni~~~~~g~~~ 441 (494)
T 3d64_A 397 RVILLAEGRLVNL-GCATGHPSFVMSNSFTNQTLAQIELFTRGGEY 441 (494)
T ss_dssp EEEEEGGGSBHHH-HTSCCSCHHHHHHHHHHHHHHHHHHHHHGGGS
T ss_pred chhhcCCCCEEEE-eCcCCCCHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 99988 999999 999 66754 7788888999999999999875
No 38
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=99.85 E-value=4.5e-22 Score=180.77 Aligned_cols=164 Identities=16% Similarity=0.165 Sum_probs=137.2
Q ss_pred cCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhccc
Q 027408 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 111 (223)
Q Consensus 32 ~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~ 111 (223)
..+.|++|+|+|+|.||+.+|+.++++|++|+++|+++...+.+...|+.. .+++++++++|+|+.|++ +.++++
T Consensus 270 ~~l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~~-~~l~e~l~~aDvVi~atg----t~~~i~ 344 (494)
T 3ce6_A 270 ALIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFDV-VTVEEAIGDADIVVTATG----NKDIIM 344 (494)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-CCHHHHGGGCSEEEECSS----SSCSBC
T ss_pred CCCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCEE-ecHHHHHhCCCEEEECCC----CHHHHH
Confidence 468999999999999999999999999999999999765445566778764 489999999999999986 456788
Q ss_pred HHHHhcCCCCcEEEEcCCCCc-cCHHHHHH-HHHhCCccEEEeeCCCCCCCCCCCC--ccCCCCeE----EccCCCCCcH
Q 027408 112 KDRIAKMKKGVLIVNNARGAI-MDTQAVVD-ACSSGHIAGYSGDVWNPQPAPKDHP--WRYMPNQA----MTPHVSGTTI 183 (223)
Q Consensus 112 ~~~~~~mk~ga~ivn~srg~~-vd~~al~~-~L~~g~i~~a~lDv~~~ep~~~~~~--l~~~~nv~----~tPH~a~~t~ 183 (223)
.+.++.||++++++|++|+.. +|..+|.+ +|+++++. +.+|+++.++. .++ ++..++++ +|||+++.+.
T Consensus 345 ~~~l~~mk~ggilvnvG~~~~eId~~aL~~~aL~~~~I~-~~ldv~~~~~~--~~~l~LL~~grlvnL~~~TPH~a~~~~ 421 (494)
T 3ce6_A 345 LEHIKAMKDHAILGNIGHFDNEIDMAGLERSGATRVNVK-PQVDLWTFGDT--GRSIIVLSEGRLLNLGNATGHPSFVMS 421 (494)
T ss_dssp HHHHHHSCTTCEEEECSSSGGGBCHHHHHHTTCEEEEEE-TTEEEEECTTT--CCEEEEEGGGSCHHHHHSCCSCHHHHH
T ss_pred HHHHHhcCCCcEEEEeCCCCCccCHHHHHHhhhccceEE-EEEEEeecCCc--chHHHHHhCCCEEeccCCCCCccccch
Confidence 899999999999999999999 99999988 78888887 66798765321 344 55667887 9999999887
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCC
Q 027408 184 DAQLRYAAGVKDMLDRYFKGEDF 206 (223)
Q Consensus 184 ~~~~~~~~~~~~~i~~~~~g~~~ 206 (223)
++. ...+.+++..|.+|++.
T Consensus 422 ~s~---~~qa~~ai~~~~~g~~~ 441 (494)
T 3ce6_A 422 NSF---ANQTIAQIELWTKNDEY 441 (494)
T ss_dssp HHH---HHHHHHHHHHHHTGGGC
T ss_pred HHH---HHHHHHHHHHHHcCCCC
Confidence 753 55788999999998765
No 39
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=99.82 E-value=4.2e-22 Score=177.87 Aligned_cols=155 Identities=14% Similarity=0.183 Sum_probs=121.9
Q ss_pred ccC-CCCCEEEEEcccHHHHHHHHHHcc-CCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCE-EEEcCCCChhhh
Q 027408 31 AYD-LEGKTVGTVGCGRIGKLLLQRLKP-FNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDI-VVVNTPLTEKTR 107 (223)
Q Consensus 31 ~~~-l~g~~igIiG~G~iG~~iA~~l~~-~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDv-Vv~~~p~~~~t~ 107 (223)
+.+ |.|+||+|+|+|+||+.+|+++++ ||++|++++++... .++...+ +++++++.+|. .++ +|+ ++|+
T Consensus 206 G~~~l~gktvgI~G~G~VG~~vA~~l~~~~G~kVv~~sD~~g~-----~~~~~gv-dl~~L~~~~d~~~~l-~~l-~~t~ 277 (419)
T 1gtm_A 206 GWDTLKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDSKGG-----IYNPDGL-NADEVLKWKNEHGSV-KDF-PGAT 277 (419)
T ss_dssp TCSCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCE-----EEEEEEE-CHHHHHHHHHHHSSS-TTC-TTSE
T ss_pred CCcccCCCEEEEEcCCHHHHHHHHHHHHhcCCEEEEEeCCCcc-----ccCccCC-CHHHHHHHHHhcCEe-ecC-ccCe
Confidence 457 999999999999999999999999 99999999643311 1111222 56777664443 222 455 5677
Q ss_pred hcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCCCCCCCC-CCccCCCCeEEccCC----C---
Q 027408 108 GMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKD-HPWRYMPNQAMTPHV----S--- 179 (223)
Q Consensus 108 ~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~ep~~~~-~~l~~~~nv~~tPH~----a--- 179 (223)
+ ++.+.+..||+ .++||++||.+||+++ +++|+.+.|.+++ +||.+++ ++|+..+||++|||+ |
T Consensus 278 ~-i~~~~l~~mk~-dilIn~ArG~~Vde~a-~~aL~~~~I~~aA-----neP~t~~a~~ll~~~~V~itPhiaaNaGGvt 349 (419)
T 1gtm_A 278 N-ITNEELLELEV-DVLAPAAIEEVITKKN-ADNIKAKIVAEVA-----NGPVTPEADEILFEKGILQIPDFLCNAGGVT 349 (419)
T ss_dssp E-ECHHHHHHSCC-SEEEECSCSCCBCTTG-GGGCCCSEEECCS-----SSCBCHHHHHHHHHTTCEEECHHHHTTHHHH
T ss_pred e-eCHHHHHhCCC-CEEEECCCcccCCHHH-HHHhcCCEEEEee-----CCCCCcchHHHHhcCCEEEECchhhhCCcce
Confidence 7 78889999998 5999999999999999 6999999999877 8887643 689999999999999 5
Q ss_pred --------------CCcHHHHHHHHHHHHHHHHHHH
Q 027408 180 --------------GTTIDAQLRYAAGVKDMLDRYF 201 (223)
Q Consensus 180 --------------~~t~~~~~~~~~~~~~~i~~~~ 201 (223)
+.+.|...++...+.+++.+++
T Consensus 350 ~s~~E~~qn~~~~~w~~~ev~~~l~~~m~~~~~~~~ 385 (419)
T 1gtm_A 350 VSYFEWVQNITGYYWTIEEVRERLDKKMTKAFYDVY 385 (419)
T ss_dssp HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeehhhhcccccccCHHHHHHHHHHHHHHHHHHHH
Confidence 5567778888887778877776
No 40
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=99.79 E-value=2.7e-19 Score=158.05 Aligned_cols=130 Identities=17% Similarity=0.232 Sum_probs=106.6
Q ss_pred cCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHh-hCCe------ecCCHHhhcccCCEEEEcC--CC
Q 027408 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE-TGAK------FEEDLDTMLPKCDIVVVNT--PL 102 (223)
Q Consensus 32 ~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~-~g~~------~~~~l~e~l~~aDvVv~~~--p~ 102 (223)
.++.|++|+|+|+|.||+.+|+.++++|++|+++|+++...+..++ ++.. ...+++++++++|+|+.++ |.
T Consensus 164 ~~l~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~ 243 (377)
T 2vhw_A 164 PGVEPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPG 243 (377)
T ss_dssp TTBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCC
Confidence 3689999999999999999999999999999999997643333333 4442 1235778888999999977 44
Q ss_pred ChhhhhcccHHHHhcCCCCcEEEEcC--CCCccCHHHHHHHHHhCCccEEEeeCCCC-CCCCCCCCccCCCCeE--EccC
Q 027408 103 TEKTRGMFDKDRIAKMKKGVLIVNNA--RGAIMDTQAVVDACSSGHIAGYSGDVWNP-QPAPKDHPWRYMPNQA--MTPH 177 (223)
Q Consensus 103 ~~~t~~~i~~~~~~~mk~ga~ivn~s--rg~~vd~~al~~~L~~g~i~~a~lDv~~~-ep~~~~~~l~~~~nv~--~tPH 177 (223)
+ .+..+++++.++.||++++|||++ +|+ ||+. ||.+.++|++..+|++ +|||
T Consensus 244 ~-~t~~li~~~~l~~mk~g~~iV~va~~~Gg----------------------v~e~~ep~~~~~~~~~~~~v~i~~~ph 300 (377)
T 2vhw_A 244 A-KAPKLVSNSLVAHMKPGAVLVDIAIDQGG----------------------CFEGSRPTTYDHPTFAVHDTLFYCVAN 300 (377)
T ss_dssp S-CCCCCBCHHHHTTSCTTCEEEEGGGGTTC----------------------SBTTCCCBCSSSCEEEETTEEEECBTT
T ss_pred C-CCcceecHHHHhcCCCCcEEEEEecCCCC----------------------ccccccCCCCCCCEEEECCEEEEecCC
Confidence 4 677888999999999999999998 332 6777 8888888999999988 9999
Q ss_pred CCCCcHH
Q 027408 178 VSGTTID 184 (223)
Q Consensus 178 ~a~~t~~ 184 (223)
+++.+..
T Consensus 301 l~~~~~~ 307 (377)
T 2vhw_A 301 MPASVPK 307 (377)
T ss_dssp GGGGSHH
T ss_pred cchhhHH
Confidence 9998866
No 41
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=99.74 E-value=2.8e-18 Score=152.90 Aligned_cols=105 Identities=21% Similarity=0.213 Sum_probs=91.0
Q ss_pred ccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhcc
Q 027408 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMF 110 (223)
Q Consensus 31 ~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i 110 (223)
+.+|.||+++|+|+|.||+.+|+++++||++|+++++++.....+...|+... ++++++++||+|+.+++ |.++|
T Consensus 242 g~~L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~vv-~LeElL~~ADIVv~atg----t~~lI 316 (464)
T 3n58_A 242 DVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEVV-TLDDAASTADIVVTTTG----NKDVI 316 (464)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEEC-CHHHHGGGCSEEEECCS----SSSSB
T ss_pred CCcccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCceec-cHHHHHhhCCEEEECCC----Ccccc
Confidence 45899999999999999999999999999999999986533333445576654 89999999999998754 67899
Q ss_pred cHHHHhcCCCCcEEEEcCCCCc-cCHHHHHH
Q 027408 111 DKDRIAKMKKGVLIVNNARGAI-MDTQAVVD 140 (223)
Q Consensus 111 ~~~~~~~mk~ga~ivn~srg~~-vd~~al~~ 140 (223)
+++.|+.||+|++|||++||.+ +|.++|.+
T Consensus 317 ~~e~l~~MK~GAILINvGRgdvEID~~aL~~ 347 (464)
T 3n58_A 317 TIDHMRKMKDMCIVGNIGHFDNEIQVAALRN 347 (464)
T ss_dssp CHHHHHHSCTTEEEEECSSSTTTBTCGGGTT
T ss_pred CHHHHhcCCCCeEEEEcCCCCcccCHHHHHh
Confidence 9999999999999999999998 99988864
No 42
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=99.72 E-value=1.2e-17 Score=148.87 Aligned_cols=106 Identities=14% Similarity=0.241 Sum_probs=92.2
Q ss_pred ccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhcc
Q 027408 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMF 110 (223)
Q Consensus 31 ~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i 110 (223)
+.++.|++|+|+|+|.||+.+|+.++++|++|+++|+++.....+...|+.. .++++++++||+|+++. .|.+++
T Consensus 206 g~~L~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~-~sL~eal~~ADVVilt~----gt~~iI 280 (436)
T 3h9u_A 206 DVMIAGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQV-LLVEDVVEEAHIFVTTT----GNDDII 280 (436)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-CCHHHHTTTCSEEEECS----SCSCSB
T ss_pred CCcccCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCee-cCHHHHHhhCCEEEECC----CCcCcc
Confidence 4679999999999999999999999999999999999764334445567665 48999999999999743 478899
Q ss_pred cHHHHhcCCCCcEEEEcCCCCc-cCHHHHHHH
Q 027408 111 DKDRIAKMKKGVLIVNNARGAI-MDTQAVVDA 141 (223)
Q Consensus 111 ~~~~~~~mk~ga~ivn~srg~~-vd~~al~~~ 141 (223)
+++.++.||+|++|||++||.+ ||.++|.+.
T Consensus 281 ~~e~l~~MK~gAIVINvgRg~vEID~~~L~~~ 312 (436)
T 3h9u_A 281 TSEHFPRMRDDAIVCNIGHFDTEIQVAWLKAN 312 (436)
T ss_dssp CTTTGGGCCTTEEEEECSSSGGGBCHHHHHHH
T ss_pred CHHHHhhcCCCcEEEEeCCCCCccCHHHHHhh
Confidence 9999999999999999999998 999999764
No 43
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=99.67 E-value=1.2e-16 Score=142.13 Aligned_cols=104 Identities=17% Similarity=0.300 Sum_probs=88.8
Q ss_pred ccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhcc
Q 027408 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMF 110 (223)
Q Consensus 31 ~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i 110 (223)
+..+.|++|+|+|+|.||+.+|+.++++|++|+++|+++.....+...|+.. .+++++++++|+|++| +.|.+++
T Consensus 215 ~~~L~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~v-~~Leeal~~ADIVi~a----tgt~~lI 289 (435)
T 3gvp_A 215 DMMFGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGFRL-VKLNEVIRQVDIVITC----TGNKNVV 289 (435)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-CCHHHHTTTCSEEEEC----SSCSCSB
T ss_pred CceecCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCEe-ccHHHHHhcCCEEEEC----CCCcccC
Confidence 4579999999999999999999999999999999998763333444556654 4899999999999995 3577899
Q ss_pred cHHHHhcCCCCcEEEEcCCCCc-cCHHHHH
Q 027408 111 DKDRIAKMKKGVLIVNNARGAI-MDTQAVV 139 (223)
Q Consensus 111 ~~~~~~~mk~ga~ivn~srg~~-vd~~al~ 139 (223)
+++.|+.||+|+++||++||.+ +|.++|.
T Consensus 290 ~~e~l~~MK~gailINvgrg~~EId~~~L~ 319 (435)
T 3gvp_A 290 TREHLDRMKNSCIVCNMGHSNTEIDVASLR 319 (435)
T ss_dssp CHHHHHHSCTTEEEEECSSTTTTBTGGGGC
T ss_pred CHHHHHhcCCCcEEEEecCCCccCCHHHHH
Confidence 9999999999999999999998 7776663
No 44
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=99.65 E-value=3.4e-16 Score=133.61 Aligned_cols=97 Identities=15% Similarity=0.235 Sum_probs=82.8
Q ss_pred ccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCee--cCCHHhhcccCCEEEEcCCCChhhhh
Q 027408 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKF--EEDLDTMLPKCDIVVVNTPLTEKTRG 108 (223)
Q Consensus 31 ~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~--~~~l~e~l~~aDvVv~~~p~~~~t~~ 108 (223)
+.++.|++|||||+|.||+.+|+.++++|++|++|||+....+...+.|+.. ..+++++++++|+|++|+|. +
T Consensus 150 ~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~-----~ 224 (293)
T 3d4o_A 150 DFTIHGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEPFHISKAAQELRDVDVCINTIPA-----L 224 (293)
T ss_dssp SSCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEEEGGGHHHHTTTCSEEEECCSS-----C
T ss_pred CCCCCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecChhhHHHHhcCCCEEEECCCh-----H
Confidence 4579999999999999999999999999999999999763333344556653 25788999999999999994 6
Q ss_pred cccHHHHhcCCCCcEEEEcCCCCc
Q 027408 109 MFDKDRIAKMKKGVLIVNNARGAI 132 (223)
Q Consensus 109 ~i~~~~~~~mk~ga~ivn~srg~~ 132 (223)
+++++.++.||+++++||++||+.
T Consensus 225 ~i~~~~l~~mk~~~~lin~ar~~~ 248 (293)
T 3d4o_A 225 VVTANVLAEMPSHTFVIDLASKPG 248 (293)
T ss_dssp CBCHHHHHHSCTTCEEEECSSTTC
T ss_pred HhCHHHHHhcCCCCEEEEecCCCC
Confidence 888999999999999999999764
No 45
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=99.65 E-value=5.6e-17 Score=142.76 Aligned_cols=155 Identities=17% Similarity=0.212 Sum_probs=104.9
Q ss_pred cCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHh-hCCe------ecCCHHhhcccCCEEEEcCCCCh
Q 027408 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE-TGAK------FEEDLDTMLPKCDIVVVNTPLTE 104 (223)
Q Consensus 32 ~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~-~g~~------~~~~l~e~l~~aDvVv~~~p~~~ 104 (223)
.++.+++|+|+|.|.||+.+++.++.+|++|+++|+++...+...+ .+.. ...+++++++++|+|+.|++...
T Consensus 162 ~~l~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~ 241 (369)
T 2eez_A 162 PGVAPASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPG 241 (369)
T ss_dssp TBBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC---
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCc
Confidence 3689999999999999999999999999999999997533333332 4432 12356678889999999998655
Q ss_pred -hhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCCCCCCCCCCccCCCCeE---------E
Q 027408 105 -KTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQA---------M 174 (223)
Q Consensus 105 -~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~ep~~~~~~l~~~~nv~---------~ 174 (223)
.+..++.++.++.||++..|||++.. .| ++ +|++ ||.+.++|++..+++. .
T Consensus 242 ~~~~~li~~~~l~~mk~gg~iV~v~~~-------------~g---g~-~d~~--ep~~~~~~~~~~~~v~~~~v~~lp~~ 302 (369)
T 2eez_A 242 AKAPKLVTRDMLSLMKEGAVIVDVAVD-------------QG---GC-VETI--RPTTHAEPTYVVDGVVHYGVANMPGA 302 (369)
T ss_dssp ----CCSCHHHHTTSCTTCEEEECC--------------------------------------CEETTEEEECCSCSGGG
T ss_pred cccchhHHHHHHHhhcCCCEEEEEecC-------------CC---CC-CCcc--cCCCCCCCEEEECCEEEEeeCCcchh
Confidence 56678889999999999999999832 12 33 8988 6666677888889998 8
Q ss_pred ccCCCCC--cHHHHHHHHHHHHHHHHHHHcCCC
Q 027408 175 TPHVSGT--TIDAQLRYAAGVKDMLDRYFKGED 205 (223)
Q Consensus 175 tPH~a~~--t~~~~~~~~~~~~~~i~~~~~g~~ 205 (223)
|||.++. +.+....+...+.+++..+..+++
T Consensus 303 ~p~~as~~~~~~~~~~l~~l~~~g~~~~~~~~~ 335 (369)
T 2eez_A 303 VPRTSTFALTNQTLPYVLKLAEKGLDALLEDAA 335 (369)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTTHHHHSCHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcChhhhhcChH
Confidence 8998874 456677777777777777776654
No 46
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=99.64 E-value=4.9e-16 Score=133.00 Aligned_cols=98 Identities=19% Similarity=0.306 Sum_probs=83.0
Q ss_pred cccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCee--cCCHHhhcccCCEEEEcCCCChhhh
Q 027408 30 RAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKF--EEDLDTMLPKCDIVVVNTPLTEKTR 107 (223)
Q Consensus 30 ~~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~--~~~l~e~l~~aDvVv~~~p~~~~t~ 107 (223)
.+.++.|++|+|||+|.||+.+|+.++++|++|++|||+....+...+.|+.. ..+++++++++|+|++|+|.
T Consensus 151 ~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~----- 225 (300)
T 2rir_A 151 TDYTIHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVPFHTDELKEHVKDIDICINTIPS----- 225 (300)
T ss_dssp CSSCSTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEEEGGGHHHHSTTCSEEEECCSS-----
T ss_pred cCCCCCCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCeEEchhhHHHHhhCCCEEEECCCh-----
Confidence 35689999999999999999999999999999999999763333333456542 35789999999999999994
Q ss_pred hcccHHHHhcCCCCcEEEEcCCCCc
Q 027408 108 GMFDKDRIAKMKKGVLIVNNARGAI 132 (223)
Q Consensus 108 ~~i~~~~~~~mk~ga~ivn~srg~~ 132 (223)
++++++.++.||+++++||++||+.
T Consensus 226 ~~i~~~~~~~mk~g~~lin~a~g~~ 250 (300)
T 2rir_A 226 MILNQTVLSSMTPKTLILDLASRPG 250 (300)
T ss_dssp CCBCHHHHTTSCTTCEEEECSSTTC
T ss_pred hhhCHHHHHhCCCCCEEEEEeCCCC
Confidence 6788999999999999999999864
No 47
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.61 E-value=1.3e-14 Score=124.99 Aligned_cols=166 Identities=12% Similarity=0.024 Sum_probs=108.9
Q ss_pred HHcCCCccCcccCcccCCCCCEEEEEcccHHHHHHHHHHccCCC--eEEEEcCCCCChhHHHhhCC--eecCCHHh-hcc
Q 027408 17 VISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQLEKETGA--KFEEDLDT-MLP 91 (223)
Q Consensus 17 ~~~~~w~~~~~~~~~~~l~g~~igIiG~G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~g~--~~~~~l~e-~l~ 91 (223)
+-.+.|....+. ...++..++|||||+|.||.++|+.|+..|+ +|++||+++...+.+.+.|+ ....++++ +++
T Consensus 15 ~~~~~~~~~~~~-~~~~~~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~ 93 (314)
T 3ggo_A 15 VPRGSHMKNIIK-ILKSLSMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDF 93 (314)
T ss_dssp ---------------CCCSCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGG
T ss_pred cccccCcCcCCc-hhhhcCCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhc
Confidence 344566544322 1234556899999999999999999999999 99999998654555566676 34568888 899
Q ss_pred cCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCCC---CCCCCCCccC
Q 027408 92 KCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQ---PAPKDHPWRY 168 (223)
Q Consensus 92 ~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~e---p~~~~~~l~~ 168 (223)
+||+|++|+|... +..++ ++....++++++|++++..+....+++.+.+.. ++.+ +--++..| |......|+.
T Consensus 94 ~aDvVilavp~~~-~~~vl-~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~~-~~v~-~hPm~G~e~sG~~~A~~~Lf~ 169 (314)
T 3ggo_A 94 SPDFVMLSSPVRT-FREIA-KKLSYILSEDATVTDQGSVKGKLVYDLENILGK-RFVG-GHPIAGTEKSGVEYSLDNLYE 169 (314)
T ss_dssp CCSEEEECSCGGG-HHHHH-HHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG-GEEC-EEECCCCCCCSGGGCCTTTTT
T ss_pred cCCEEEEeCCHHH-HHHHH-HHHhhccCCCcEEEECCCCcHHHHHHHHHhcCC-CEEe-cCcccCCcccchhhhhhhhhc
Confidence 9999999999543 23333 677788999999999987765556666666654 2221 23444433 3334456777
Q ss_pred CCCeEEccCCCCCcHHHHHH
Q 027408 169 MPNQAMTPHVSGTTIDAQLR 188 (223)
Q Consensus 169 ~~nv~~tPH~a~~t~~~~~~ 188 (223)
...+++||+- +.+.+..++
T Consensus 170 g~~~il~~~~-~~~~~~~~~ 188 (314)
T 3ggo_A 170 GKKVILTPTK-KTDKKRLKL 188 (314)
T ss_dssp TCEEEECCCT-TSCHHHHHH
T ss_pred CCEEEEEeCC-CCCHHHHHH
Confidence 7889999973 345555443
No 48
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.59 E-value=1.4e-15 Score=130.15 Aligned_cols=121 Identities=12% Similarity=0.124 Sum_probs=101.3
Q ss_pred CEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhcccHHHHh
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIA 116 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~~ 116 (223)
+||||||+|.||..+|+.|...|++|++|||++...+...+.|....+++.|+++.+|+|++|+|..+....++....+.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~~ 85 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFSMELVE 85 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHHHH
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHHHh
Confidence 58999999999999999999999999999998866666667788888999999999999999999887777778788999
Q ss_pred cCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCC
Q 027408 117 KMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNP 157 (223)
Q Consensus 117 ~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~ 157 (223)
.++++.++||++....-+...+.+.+.+..+.+...-|...
T Consensus 86 ~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ldapVsGg 126 (297)
T 4gbj_A 86 KLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYVGAPIFAR 126 (297)
T ss_dssp HHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECC
T ss_pred hcCCCeEEEECCCCChHHHHHHHHHHHhcCCceecCCcCCC
Confidence 99999999999999999999999999999888554445443
No 49
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.58 E-value=1.8e-15 Score=129.72 Aligned_cols=120 Identities=18% Similarity=0.223 Sum_probs=102.2
Q ss_pred CEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhcccH--HH
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDK--DR 114 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~--~~ 114 (223)
++||+||+|.||..+|+.|.+.|++|.+|||++...+.....|.....++.|+++.||+|++|+|..+..+.++.. ..
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g~ 83 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 83 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSSS
T ss_pred CEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchhhh
Confidence 5899999999999999999999999999999875556666778888899999999999999999988877766532 36
Q ss_pred HhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCC
Q 027408 115 IAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWN 156 (223)
Q Consensus 115 ~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~ 156 (223)
++.+++|.++||+|....-+...+.+.+++..+.+...-|..
T Consensus 84 ~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~lDaPVsG 125 (300)
T 3obb_A 84 LAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDAPVSG 125 (300)
T ss_dssp TTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEES
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEecCCCC
Confidence 788999999999999999999999999999988844333443
No 50
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.58 E-value=6.9e-15 Score=126.53 Aligned_cols=144 Identities=13% Similarity=0.119 Sum_probs=98.3
Q ss_pred HHHHHcCCCccCcccCcccCCCCCEEEEEcccHHHHHHHHHHccCCC-eEEEEcCCC--CChhHHHhhCCeecCCHHhhc
Q 027408 14 HHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVK--MDPQLEKETGAKFEEDLDTML 90 (223)
Q Consensus 14 ~~~~~~~~w~~~~~~~~~~~l~g~~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~~--~~~~~~~~~g~~~~~~l~e~l 90 (223)
++..+.+.|..+...........++|||||+|.||..+|+.|...|+ +|.+||+++ ...+...+.|+....++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~~~~~~e~~ 81 (312)
T 3qsg_A 2 HHHHHHSSGVDLGTENLYFQSNAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSCKASVAEVA 81 (312)
T ss_dssp -----------------------CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEECSCHHHHH
T ss_pred CcccccccccccCcccccccCCCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEEeCCHHHHH
Confidence 34566677764332122234456899999999999999999999999 999999963 334455567888888999999
Q ss_pred ccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhC--CccEEEeeCCCCCC
Q 027408 91 PKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSG--HIAGYSGDVWNPQP 159 (223)
Q Consensus 91 ~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g--~i~~a~lDv~~~ep 159 (223)
++||+|++|+|.......+ .+..+.++++++|||++........++.+.+.+. .+.+....|+.++|
T Consensus 82 ~~aDvVi~~vp~~~~~~~~--~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~~vd~pv~g~~~ 150 (312)
T 3qsg_A 82 GECDVIFSLVTAQAALEVA--QQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQYAAVAVMSAVK 150 (312)
T ss_dssp HHCSEEEECSCTTTHHHHH--HHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCEEEEEEECSCST
T ss_pred hcCCEEEEecCchhHHHHH--HhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCeEEeccccCCch
Confidence 9999999999976655432 6778889999999999999999999999988876 45533334555433
No 51
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.57 E-value=3e-15 Score=128.46 Aligned_cols=125 Identities=14% Similarity=0.085 Sum_probs=101.9
Q ss_pred CCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhcccH
Q 027408 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDK 112 (223)
Q Consensus 33 ~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~ 112 (223)
++..++|||||+|.||..+|+.|...|++|.+|||++...+...+.|+....+++++++++|+|++++|....++.++..
T Consensus 6 ~~~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~ 85 (306)
T 3l6d_A 6 ESFEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDNHATHEVLGM 85 (306)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSSHHHHHHHHTS
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCCHHHHHHHhcc
Confidence 56778999999999999999999999999999999865444555568877889999999999999999976666666642
Q ss_pred HHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCC
Q 027408 113 DRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNP 157 (223)
Q Consensus 113 ~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~ 157 (223)
+.+..++++.++||+++....+...+.+.+.+..+.+....|+..
T Consensus 86 ~~l~~~~~g~ivid~st~~~~~~~~l~~~~~~~g~~~vdapv~g~ 130 (306)
T 3l6d_A 86 PGVARALAHRTIVDYTTNAQDEGLALQGLVNQAGGHYVKGMIVAY 130 (306)
T ss_dssp TTHHHHTTTCEEEECCCCCTTHHHHHHHHHHHTTCEEEEEEEESC
T ss_pred cchhhccCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEecccccC
Confidence 234557899999999999999999999999887776443344443
No 52
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.57 E-value=4.9e-15 Score=127.23 Aligned_cols=120 Identities=13% Similarity=0.081 Sum_probs=99.4
Q ss_pred ccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhcc
Q 027408 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMF 110 (223)
Q Consensus 31 ~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i 110 (223)
......++|||||+|.||..+|+.|...|++|.+|||++...+...+.|+....++++++++||+|++|+|....++.++
T Consensus 16 ~~~~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~ 95 (310)
T 3doj_A 16 PRGSHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVV 95 (310)
T ss_dssp --CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHH
T ss_pred cccccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHH
Confidence 34556789999999999999999999999999999998765566666788888899999999999999999655665554
Q ss_pred --cHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEE
Q 027408 111 --DKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGY 150 (223)
Q Consensus 111 --~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a 150 (223)
..+.+..++++.++||++.........+.+.+.+..+...
T Consensus 96 ~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~v 137 (310)
T 3doj_A 96 FDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFV 137 (310)
T ss_dssp HSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred hCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 2455678899999999999998888999999988766643
No 53
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.57 E-value=5.3e-14 Score=118.67 Aligned_cols=145 Identities=10% Similarity=0.038 Sum_probs=104.5
Q ss_pred CEEEEEcccHHHHHHHHHHccCCC--eEEEEcCCCCChhHHHhhCCe--ecCCHHhhcc-cCCEEEEcCCCChhhhhccc
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQLEKETGAK--FEEDLDTMLP-KCDIVVVNTPLTEKTRGMFD 111 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~g~~--~~~~l~e~l~-~aDvVv~~~p~~~~t~~~i~ 111 (223)
++|+|||+|.||..+|+.++..|+ +|++||+++...+...+.|+. ...+++++++ ++|+|++|+|.. .+..++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilavp~~-~~~~v~- 79 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVR-TFREIA- 79 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHH-HHHHHH-
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcCCHH-HHHHHH-
Confidence 589999999999999999999998 899999976444445556663 3457888999 999999999943 333333
Q ss_pred HHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCCC---CCCCCCCccCCCCeEEccCCCCCcHHHH
Q 027408 112 KDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQ---PAPKDHPWRYMPNQAMTPHVSGTTIDAQ 186 (223)
Q Consensus 112 ~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~e---p~~~~~~l~~~~nv~~tPH~a~~t~~~~ 186 (223)
.+....++++++|++++++.....+.+.+.+.++-+. ...++..+ |.....+++...+++++||.++. .+..
T Consensus 80 ~~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~~~v~--~~p~~~~~~~gp~~a~~~l~~g~~~~~~~~~~~~-~~~~ 154 (281)
T 2g5c_A 80 KKLSYILSEDATVTDQGSVKGKLVYDLENILGKRFVG--GHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTD-KKRL 154 (281)
T ss_dssp HHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGGGEEC--EEEECCCSCCSGGGCCSSTTTTCEEEECCCSSSC-HHHH
T ss_pred HHHHhhCCCCcEEEECCCCcHHHHHHHHHhcccccee--eccccCCccCChhhhhhHHhCCCCEEEecCCCCC-HHHH
Confidence 4566778999999999988876667788888764111 12334333 33344567777789999997654 4433
No 54
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.57 E-value=2.4e-15 Score=129.76 Aligned_cols=123 Identities=20% Similarity=0.155 Sum_probs=100.5
Q ss_pred CCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhcccH
Q 027408 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDK 112 (223)
Q Consensus 33 ~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~ 112 (223)
....++|||||+|.||..+|+.|...|++|.+|||++...+...+.|+....+++++++++|+|++|+|....++.++..
T Consensus 28 ~~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~ 107 (320)
T 4dll_A 28 DPYARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFA 107 (320)
T ss_dssp -CCCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTT
T ss_pred ccCCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcc
Confidence 34677999999999999999999999999999999864444455557877789999999999999999966666555432
Q ss_pred -HHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCC
Q 027408 113 -DRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVW 155 (223)
Q Consensus 113 -~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~ 155 (223)
+.++.++++.++||++++.+.+.+.+.+.+.+..+......|+
T Consensus 108 ~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~pv~ 151 (320)
T 4dll_A 108 QGVAAAMKPGSLFLDMASITPREARDHAARLGALGIAHLDTPVS 151 (320)
T ss_dssp TCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEE
T ss_pred hhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCEEEeCCCc
Confidence 5667899999999999999999999999998877764443333
No 55
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.56 E-value=9.4e-15 Score=124.69 Aligned_cols=119 Identities=13% Similarity=0.164 Sum_probs=101.1
Q ss_pred CCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhcccHHHH
Q 027408 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRI 115 (223)
Q Consensus 36 g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~ 115 (223)
.++|||||+|.||..+|+.|...|++|.+||+++...+...+.|+...++++++++ +|+|++|+|..+.++.++ ++..
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~-~~l~ 92 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVV-GELA 92 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHH-HHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHH-HHHH
Confidence 36899999999999999999999999999999886666666778888889999999 999999999766666666 6788
Q ss_pred hcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCC
Q 027408 116 AKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWN 156 (223)
Q Consensus 116 ~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~ 156 (223)
+.++++.++||+++....+.+.+.+.+.+..+.+....|+.
T Consensus 93 ~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g 133 (296)
T 3qha_A 93 GHAKPGTVIAIHSTISDTTAVELARDLKARDIHIVDAPVSG 133 (296)
T ss_dssp TTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCEEEECCEES
T ss_pred HhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCEEEeCCCcC
Confidence 88999999999999999899999999988766644333443
No 56
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.54 E-value=9.8e-15 Score=123.80 Aligned_cols=114 Identities=12% Similarity=0.111 Sum_probs=97.3
Q ss_pred CEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhccc--HHH
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD--KDR 114 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~--~~~ 114 (223)
++|||||+|.||..+|+.|...|++|.+|||++...+...+.++....+++++++++|+|++|+|....++.++. ++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l 81 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHGV 81 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcchH
Confidence 689999999999999999999999999999987655666666888888999999999999999996656655552 456
Q ss_pred HhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEE
Q 027408 115 IAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGY 150 (223)
Q Consensus 115 ~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a 150 (223)
.+.+++++++||++.....+...+.+.+.+..+.+.
T Consensus 82 ~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~ 117 (287)
T 3pef_A 82 LEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGRFL 117 (287)
T ss_dssp HHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred hhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCEEE
Confidence 678999999999999999888999999988766643
No 57
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.54 E-value=1.6e-14 Score=126.62 Aligned_cols=123 Identities=14% Similarity=0.171 Sum_probs=103.3
Q ss_pred CCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccC---CEEEEcCCCChhhhhcc
Q 027408 34 LEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKC---DIVVVNTPLTEKTRGMF 110 (223)
Q Consensus 34 l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~a---DvVv~~~p~~~~t~~~i 110 (223)
+.+++|||||+|.||..+|+.|...|++|.+|||++...+.....|+....+++++++++ |+|++++|.. .+..++
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~-~v~~vl 98 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAA-VVDSML 98 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGG-GHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHH-HHHHHH
Confidence 567899999999999999999999999999999986444555556777778999999988 9999999966 555555
Q ss_pred cHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCCC
Q 027408 111 DKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQ 158 (223)
Q Consensus 111 ~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~e 158 (223)
.+....++++.+|||++.+...+...+.+.+.+..+.+....|+..+
T Consensus 99 -~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVsGg~ 145 (358)
T 4e21_A 99 -QRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTSGGI 145 (358)
T ss_dssp -HHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEECGG
T ss_pred -HHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCCCCH
Confidence 67788899999999999999999999999999988886666666543
No 58
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=99.52 E-value=1.8e-14 Score=128.13 Aligned_cols=141 Identities=18% Similarity=0.258 Sum_probs=106.9
Q ss_pred CCCCCEEEEEcccHHHHHHHHHHccCCC-eEEEEcCCCCCh-hHHHhhCCee--cCCHHhhcccCCEEEEcCCCChhhhh
Q 027408 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDP-QLEKETGAKF--EEDLDTMLPKCDIVVVNTPLTEKTRG 108 (223)
Q Consensus 33 ~l~g~~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~-~~~~~~g~~~--~~~l~e~l~~aDvVv~~~p~~~~t~~ 108 (223)
++.|++|+|+|+|.||+.+++.++.+|+ +|+++||+.... +.+..+|... ..++.+++.++|+|+.|+|.+ ..
T Consensus 164 ~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~~l~~aDvVi~at~~~---~~ 240 (404)
T 1gpj_A 164 SLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSATAAP---HP 240 (404)
T ss_dssp CCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEECCSSS---SC
T ss_pred cccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCceecHHhHHHHhcCCCEEEEccCCC---Cc
Confidence 4799999999999999999999999999 899999976332 4556667643 246778888999999998743 44
Q ss_pred cccHHHHhc--CC----CCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCCCCCCCCCCccCCCCeEE--ccCCCC
Q 027408 109 MFDKDRIAK--MK----KGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAM--TPHVSG 180 (223)
Q Consensus 109 ~i~~~~~~~--mk----~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~ep~~~~~~l~~~~nv~~--tPH~a~ 180 (223)
+++.+.++. || ++.+++|++ +|.+.+++++.+|||++ +||+++
T Consensus 241 ~~~~~~l~~~~lk~r~~~~~v~vdia-----------------------------~P~~i~~~l~~l~~v~l~d~d~l~~ 291 (404)
T 1gpj_A 241 VIHVDDVREALRKRDRRSPILIIDIA-----------------------------NPRDVEEGVENIEDVEVRTIDDLRV 291 (404)
T ss_dssp CBCHHHHHHHHHHCSSCCCEEEEECC-----------------------------SSCSBCTTGGGSTTEEEEEHHHHHH
T ss_pred eecHHHHHHHHHhccCCCCEEEEEcc-----------------------------CCCCCCccccccCCeEEEeHhhHHH
Confidence 566677766 32 445566654 26555678999999999 999999
Q ss_pred CcHHHHH----------HHHHHHHHHHHHHHcCCC
Q 027408 181 TTIDAQL----------RYAAGVKDMLDRYFKGED 205 (223)
Q Consensus 181 ~t~~~~~----------~~~~~~~~~i~~~~~g~~ 205 (223)
.+.++.. .+....++++..|+.+.+
T Consensus 292 ~~~~~~~~r~~~~~~~~~li~q~~~~f~~w~~~~~ 326 (404)
T 1gpj_A 292 IARENLERRRKEIPKVEKLIEEELSTVEEELEKLK 326 (404)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 8887654 555566677778877654
No 59
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.51 E-value=1.1e-14 Score=123.42 Aligned_cols=113 Identities=14% Similarity=0.093 Sum_probs=95.6
Q ss_pred CEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhccc--HHH
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD--KDR 114 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~--~~~ 114 (223)
++|||||+|.||..+|+.|...|++|.+|||++...+...+.|+...+++++++++||+|++|+|..+.++.++. ++.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~~l 81 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAAREVCFGANGV 81 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCchhh
Confidence 579999999999999999999999999999987655656666888888999999999999999996656655542 445
Q ss_pred HhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccE
Q 027408 115 IAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAG 149 (223)
Q Consensus 115 ~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~ 149 (223)
.+.++++.++||++++...+...+.+.+.+..+..
T Consensus 82 ~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~ 116 (287)
T 3pdu_A 82 LEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGRF 116 (287)
T ss_dssp GGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEE
T ss_pred hhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCEE
Confidence 67789999999999999988899999988876653
No 60
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.50 E-value=4.6e-13 Score=113.48 Aligned_cols=140 Identities=12% Similarity=0.080 Sum_probs=103.4
Q ss_pred CEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhh-------------------------CCeecCCHHhhcc
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKET-------------------------GAKFEEDLDTMLP 91 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~-------------------------g~~~~~~l~e~l~ 91 (223)
++|+|||+|.||..+|+.+...|++|++||+++...+...+. .+...++++++++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~~ 84 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQAVK 84 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHHTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHHhc
Confidence 689999999999999999999999999999976332222211 1345678999999
Q ss_pred cCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCCCCCCCCCCccCCCC
Q 027408 92 KCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPN 171 (223)
Q Consensus 92 ~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~ep~~~~~~l~~~~n 171 (223)
+||+|+.++|.+.+.+..+.++..+.+++++++++.+.+ +...++.+.+... .+..++..+. |.+..+.
T Consensus 85 ~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~--~~~~~la~~~~~~-~~~ig~h~~~--------p~~~~~l 153 (283)
T 4e12_A 85 DADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSST--LLPSDLVGYTGRG-DKFLALHFAN--------HVWVNNT 153 (283)
T ss_dssp TCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHHHHHSCG-GGEEEEEECS--------STTTSCE
T ss_pred cCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCC--CCHHHHHhhcCCC-cceEEEccCC--------CcccCce
Confidence 999999999988777777778888889999999966554 3567787777543 3456666442 3345677
Q ss_pred eEEccCCCCCcHHHHHH
Q 027408 172 QAMTPHVSGTTIDAQLR 188 (223)
Q Consensus 172 v~~tPH~a~~t~~~~~~ 188 (223)
+.++||- ..+.+..++
T Consensus 154 vevv~~~-~t~~~~~~~ 169 (283)
T 4e12_A 154 AEVMGTT-KTDPEVYQQ 169 (283)
T ss_dssp EEEEECT-TSCHHHHHH
T ss_pred EEEEeCC-CCCHHHHHH
Confidence 8889983 344555443
No 61
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.50 E-value=1.5e-14 Score=123.30 Aligned_cols=112 Identities=18% Similarity=0.247 Sum_probs=94.1
Q ss_pred CEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhccc--HHH
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD--KDR 114 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~--~~~ 114 (223)
++|+|||+|.||..+|+.|...|++|.+|||++...+...+.|+...++++++++++|+|++|+|....++.++. .+.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~~ 83 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 83 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSCG
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCeEcCCHHHHHhCCCeEEEECCCHHHHHHHHcCchhH
Confidence 689999999999999999999999999999986444555556888788999999999999999996655555542 156
Q ss_pred HhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCcc
Q 027408 115 IAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (223)
Q Consensus 115 ~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~ 148 (223)
.+.+++++++||++.......+.+.+.+.+..+.
T Consensus 84 ~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~~ 117 (302)
T 2h78_A 84 LAHIAPGTLVLECSTIAPTSARKIHAAARERGLA 117 (302)
T ss_dssp GGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTCC
T ss_pred HhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 6788999999999999988888999999876555
No 62
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.50 E-value=1.5e-14 Score=123.70 Aligned_cols=115 Identities=16% Similarity=0.052 Sum_probs=94.3
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCee-cCCHHhhcccCCEEEEcCCCChhhhhccc--
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKF-EEDLDTMLPKCDIVVVNTPLTEKTRGMFD-- 111 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~-~~~l~e~l~~aDvVv~~~p~~~~t~~~i~-- 111 (223)
..++|||||+|.||..+|+.|...|++|.+|||++...+...+.|... ..++++++++||+|++|+|.....+.++.
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~ 85 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFGE 85 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHhCh
Confidence 347899999999999999999999999999999864444555567665 67899999999999999996655555542
Q ss_pred HHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccE
Q 027408 112 KDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAG 149 (223)
Q Consensus 112 ~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~ 149 (223)
++..+.+++++++||+++........+.+.+.+..+.+
T Consensus 86 ~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~ 123 (303)
T 3g0o_A 86 DGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLNM 123 (303)
T ss_dssp CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCEE
T ss_pred hhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCeE
Confidence 34567789999999999999888889999998876653
No 63
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.49 E-value=7.3e-14 Score=120.45 Aligned_cols=136 Identities=14% Similarity=0.010 Sum_probs=97.0
Q ss_pred HHHHHcCCCccCcccCcccCCCCCEEEEEcccHHHHHHHHHHccCC-CeEEEEcCCCC-------ChhHHHhhCCeecC-
Q 027408 14 HHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFN-CNLLYHDRVKM-------DPQLEKETGAKFEE- 84 (223)
Q Consensus 14 ~~~~~~~~w~~~~~~~~~~~l~g~~igIiG~G~iG~~iA~~l~~~G-~~V~~~d~~~~-------~~~~~~~~g~~~~~- 84 (223)
+.+.+...|.+.... .. -.++|||||+|.||..+|+.|...| ++|++||+++. ..+.....|+ ..
T Consensus 6 ~~~~~~~~~~~~~~~---~~-M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~--~~~ 79 (317)
T 4ezb_A 6 HHSSGVDLGTENLYF---QS-MMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV--EPL 79 (317)
T ss_dssp ---------CCCHHH---HT-SCCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC--EEE
T ss_pred ccccccccCcccCcc---cc-cCCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC--CCC
Confidence 444455567653210 11 2378999999999999999999999 99999999752 1122233465 55
Q ss_pred CHHhhcccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCC
Q 027408 85 DLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNP 157 (223)
Q Consensus 85 ~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~ 157 (223)
++++++++||+|++|+|.......+ .+....+++++++||++.....+...+.+.+.+..+.+....|+.+
T Consensus 80 s~~e~~~~aDvVi~avp~~~~~~~~--~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d~pv~g~ 150 (317)
T 4ezb_A 80 DDVAGIACADVVLSLVVGAATKAVA--ASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVEGAVMAR 150 (317)
T ss_dssp SSGGGGGGCSEEEECCCGGGHHHHH--HHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEEEEECSC
T ss_pred CHHHHHhcCCEEEEecCCHHHHHHH--HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeccCCCC
Confidence 7889999999999999966655443 6778889999999999999999999999999887666444445554
No 64
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.48 E-value=1.5e-13 Score=116.31 Aligned_cols=144 Identities=14% Similarity=0.133 Sum_probs=100.3
Q ss_pred CCEEEEEcccHHHHHHHHHHccC--CCeEEEEcCCCCChhHHHhhCC--eecCCHHhhcccCCEEEEcCCCChhhhhccc
Q 027408 36 GKTVGTVGCGRIGKLLLQRLKPF--NCNLLYHDRVKMDPQLEKETGA--KFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 111 (223)
Q Consensus 36 g~~igIiG~G~iG~~iA~~l~~~--G~~V~~~d~~~~~~~~~~~~g~--~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~ 111 (223)
-++|+|||+|.||..+|+.+... |.+|++||+++...+...+.|. ....+++++++++|+|++|+|.... ..++
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilavp~~~~-~~v~- 83 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAVPIKKT-IDFI- 83 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECSCHHHH-HHHH-
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcCCHHHH-HHHH-
Confidence 46899999999999999999865 6899999997543344444565 3456788889999999999994332 3333
Q ss_pred HHHHhc-CCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEE-eeCCCC---CCCCCCCCccCCCCeEEccCCCCC
Q 027408 112 KDRIAK-MKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYS-GDVWNP---QPAPKDHPWRYMPNQAMTPHVSGT 181 (223)
Q Consensus 112 ~~~~~~-mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~-lDv~~~---ep~~~~~~l~~~~nv~~tPH~a~~ 181 (223)
.+.... ++++++|++++.......+.+.+.+.+..+.... .-++.. .|.....+++....++++||.++.
T Consensus 84 ~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~~v~~~P~~g~~~~g~~~a~~~l~~g~~~~~~~~~~~~ 158 (290)
T 3b1f_A 84 KILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQFVGSHPMAGSHKSGAVAANVNLFENAYYIFSPSCLTK 158 (290)
T ss_dssp HHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCEEEEEEEC-----CCTTSCCTTTTTTSEEEEEECTTCC
T ss_pred HHHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCEEEEeCCcCCCCcchHHHhhHHHhCCCeEEEecCCCCC
Confidence 456667 8999999999887766667787777652333222 112221 344444567777779999987654
No 65
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=99.42 E-value=8.3e-13 Score=115.31 Aligned_cols=108 Identities=21% Similarity=0.259 Sum_probs=91.5
Q ss_pred CCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcc-cCCEEEEcCCCChhhhhccc
Q 027408 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLP-KCDIVVVNTPLTEKTRGMFD 111 (223)
Q Consensus 33 ~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~-~aDvVv~~~p~~~~t~~~i~ 111 (223)
+|.||+|+|+|+|+||+.+|+.++.+|++|+++|++....+..+.++...+ +.++++. +||+++.| .+.+.|+
T Consensus 172 ~L~GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~~v-~~~ell~~~~DIliP~-----A~~~~I~ 245 (355)
T 1c1d_A 172 SLDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAV-ALEDVLSTPCDVFAPC-----AMGGVIT 245 (355)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC-CGGGGGGCCCSEEEEC-----SCSCCBC
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCCEEe-ChHHhhcCccceecHh-----HHHhhcC
Confidence 799999999999999999999999999999999986422334555677665 7788887 89999854 3678999
Q ss_pred HHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCcc
Q 027408 112 KDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (223)
Q Consensus 112 ~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~ 148 (223)
.+.++.|| ..+|+|.+++++.++++ .+.|.++.+.
T Consensus 246 ~~~~~~lk-~~iVie~AN~p~t~~eA-~~~L~~~gIl 280 (355)
T 1c1d_A 246 TEVARTLD-CSVVAGAANNVIADEAA-SDILHARGIL 280 (355)
T ss_dssp HHHHHHCC-CSEECCSCTTCBCSHHH-HHHHHHTTCE
T ss_pred HHHHhhCC-CCEEEECCCCCCCCHHH-HHHHHhCCEE
Confidence 99999998 68999999999999777 5889988876
No 66
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.41 E-value=4.8e-13 Score=121.38 Aligned_cols=122 Identities=11% Similarity=0.131 Sum_probs=99.5
Q ss_pred CCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhh---C--CeecCCHHhhcc---cCCEEEEcCCCChhhh
Q 027408 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKET---G--AKFEEDLDTMLP---KCDIVVVNTPLTEKTR 107 (223)
Q Consensus 36 g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~---g--~~~~~~l~e~l~---~aDvVv~~~p~~~~t~ 107 (223)
.++|||||+|.||..+|+.|...|++|.+|||++...+...+. + +....+++++++ ++|+|++++|..+.+.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~ 83 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQAVD 83 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSSHHHH
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCChHHHH
Confidence 4689999999999999999999999999999987443333332 2 233578999876 5999999999877777
Q ss_pred hcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCCC
Q 027408 108 GMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQ 158 (223)
Q Consensus 108 ~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~e 158 (223)
.++ ++....+++|.+|||++++...+...+.+.+.+..+.+....|...+
T Consensus 84 ~vl-~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsGg~ 133 (484)
T 4gwg_A 84 DFI-EKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSGGE 133 (484)
T ss_dssp HHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHH
T ss_pred HHH-HHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccCCH
Confidence 766 67888999999999999999999999999999988876666665443
No 67
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.41 E-value=3.7e-13 Score=117.19 Aligned_cols=139 Identities=14% Similarity=0.089 Sum_probs=97.1
Q ss_pred CCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhccc----CCEEEEcCCCChhhhhccc
Q 027408 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPK----CDIVVVNTPLTEKTRGMFD 111 (223)
Q Consensus 36 g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~----aDvVv~~~p~~~~t~~~i~ 111 (223)
-++|||||+|.||.++|+.|+..|++|++||+++...+.+.+.|+....++++++++ +|+|++|+|. ..+..++
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~~~~~e~~~~a~~~aDlVilavP~-~~~~~vl- 85 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPM-TAIDSLL- 85 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEESCHHHHHHHHHHTTCEEEECSCH-HHHHHHH-
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeeeCCHHHHHHhcccCCCEEEEeCCH-HHHHHHH-
Confidence 357999999999999999999999999999998655555667788766788888765 6999999993 3444444
Q ss_pred HHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEE-eeCCCCC---CCCCCCCccCCCCeEEccCCC
Q 027408 112 KDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYS-GDVWNPQ---PAPKDHPWRYMPNQAMTPHVS 179 (223)
Q Consensus 112 ~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~-lDv~~~e---p~~~~~~l~~~~nv~~tPH~a 179 (223)
++. ..++++++|+|++.-+..-.+++.+.+. ...+.. --++..| |......|+....+++||+-.
T Consensus 86 ~~l-~~~~~~~iv~Dv~Svk~~i~~~~~~~~~--~~~~v~~HPmaG~e~sG~~aa~~~Lf~g~~~iltp~~~ 154 (341)
T 3ktd_A 86 DAV-HTHAPNNGFTDVVSVKTAVYDAVKARNM--QHRYVGSHPMAGTANSGWSASMDGLFKRAVWVVTFDQL 154 (341)
T ss_dssp HHH-HHHCTTCCEEECCSCSHHHHHHHHHTTC--GGGEECEEECCSCC-CCGGGCCSSTTTTCEEEECCGGG
T ss_pred HHH-HccCCCCEEEEcCCCChHHHHHHHHhCC--CCcEecCCccccccccchhhhhhHHhcCCeEEEEeCCC
Confidence 333 3358999999998765433333433332 233322 3444433 223445677777899999743
No 68
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.40 E-value=5.4e-13 Score=121.15 Aligned_cols=121 Identities=12% Similarity=0.101 Sum_probs=96.1
Q ss_pred CCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhh----CCeecCCHHhhccc---CCEEEEcCCCChh
Q 027408 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKET----GAKFEEDLDTMLPK---CDIVVVNTPLTEK 105 (223)
Q Consensus 33 ~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~----g~~~~~~l~e~l~~---aDvVv~~~p~~~~ 105 (223)
..+.++|||||+|.||+.+|..|...|++|.+|||++...+...+. ++....+++++++. +|+|++++|..+.
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~ 91 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAG 91 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSCSSSH
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECCCHHH
Confidence 4677889999999999999999999999999999976333333332 67667789998876 9999999997777
Q ss_pred hhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeC
Q 027408 106 TRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDV 154 (223)
Q Consensus 106 t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv 154 (223)
+..++ ++....++++.+|||++.|...+...+.+.+.+..+.....-|
T Consensus 92 v~~vl-~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~v~~pv 139 (480)
T 2zyd_A 92 TDAAI-DSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGV 139 (480)
T ss_dssp HHHHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHH-HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCeeCCcc
Confidence 77776 5677889999999999999988888898889876665443333
No 69
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=99.40 E-value=6.9e-13 Score=117.92 Aligned_cols=102 Identities=20% Similarity=0.262 Sum_probs=83.4
Q ss_pred CCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecC---------------------------C
Q 027408 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEE---------------------------D 85 (223)
Q Consensus 33 ~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~---------------------------~ 85 (223)
++.|++|+|+|+|.||..+++.++.+|++|+++|+++...+..+++|...+. +
T Consensus 169 ~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 248 (401)
T 1x13_A 169 KVPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMEL 248 (401)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHH
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHH
Confidence 5789999999999999999999999999999999987555555666765432 3
Q ss_pred HHhhcccCCEEEEc--CCCChhhhhcccHHHHhcCCCCcEEEEcC--CCCccCH
Q 027408 86 LDTMLPKCDIVVVN--TPLTEKTRGMFDKDRIAKMKKGVLIVNNA--RGAIMDT 135 (223)
Q Consensus 86 l~e~l~~aDvVv~~--~p~~~~t~~~i~~~~~~~mk~ga~ivn~s--rg~~vd~ 135 (223)
++++++++|+|+.+ +|.. .+..+++++.++.||+|++|||++ ||+.++.
T Consensus 249 l~e~~~~aDvVI~~~~~pg~-~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~ 301 (401)
T 1x13_A 249 FAAQAKEVDIIVTTALIPGK-PAPKLITREMVDSMKAGSVIVDLAAQNGGNCEY 301 (401)
T ss_dssp HHHHHHHCSEEEECCCCTTS-CCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTT
T ss_pred HHHHhCCCCEEEECCccCCC-CCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCc
Confidence 67788899999998 4432 355778899999999999999999 8775543
No 70
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.39 E-value=2.3e-13 Score=115.57 Aligned_cols=112 Identities=19% Similarity=0.283 Sum_probs=91.1
Q ss_pred CEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhccc--HHH
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD--KDR 114 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~--~~~ 114 (223)
++|+|||+|.||..+|+.|...|++|.+||+++...+...+.|+....+++++++++|+|++|+|....+..++. ++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~~~~~l 85 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGI 85 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHhCcchH
Confidence 589999999999999999999999999999976444444455777777899999999999999996655555542 345
Q ss_pred HhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCcc
Q 027408 115 IAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (223)
Q Consensus 115 ~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~ 148 (223)
.+.+++++++|+++.+...+.+.|.+.+.+..+.
T Consensus 86 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~ 119 (299)
T 1vpd_A 86 IEGAKPGTVLIDMSSIAPLASREISDALKAKGVE 119 (299)
T ss_dssp HHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCE
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCe
Confidence 5778999999999999877788898888775544
No 71
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.38 E-value=7.5e-12 Score=105.23 Aligned_cols=143 Identities=15% Similarity=0.137 Sum_probs=95.8
Q ss_pred CEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCe--ecCCHHhhcccCCEEEEcCCCChhhhhcccHHH
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAK--FEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDR 114 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~--~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~ 114 (223)
++|+|||+|.||+.+|+.|...|++|.+||+++...+...+.|+. ...+++++ +++|+|++++|.. .+..++ ++.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~av~~~-~~~~~~-~~l 77 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLCTPIQ-LILPTL-EKL 77 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEECSCHH-HHHHHH-HHH
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEECCHH-HHHHHH-HHH
Confidence 489999999999999999999999999999976433444455652 35678888 9999999999932 333333 456
Q ss_pred HhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCC---CCCCCCCCccCCCCeEEccCCCCCcHHHH
Q 027408 115 IAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNP---QPAPKDHPWRYMPNQAMTPHVSGTTIDAQ 186 (223)
Q Consensus 115 ~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~---ep~~~~~~l~~~~nv~~tPH~a~~t~~~~ 186 (223)
...++++++|+|++..+....+.+.+.+. ++.+ ...++.. .|....+.++..+.++++|+-+. +.+..
T Consensus 78 ~~~~~~~~~vv~~~~~~~~~~~~~~~~~~--~~~~-~~p~~g~~~~gp~~a~~~~~~g~~~~~~~~~~~-~~~~~ 148 (279)
T 2f1k_A 78 IPHLSPTAIVTDVASVKTAIAEPASQLWS--GFIG-GHPMAGTAAQGIDGAEENLFVNAPYVLTPTEYT-DPEQL 148 (279)
T ss_dssp GGGSCTTCEEEECCSCCHHHHHHHHHHST--TCEE-EEECCCCSCSSGGGCCTTTTTTCEEEEEECTTC-CHHHH
T ss_pred HhhCCCCCEEEECCCCcHHHHHHHHHHhC--CEee-cCcccCCccCCHHHHhHHHhCCCcEEEecCCCC-CHHHH
Confidence 67789999999997766555555555433 2221 2234322 23333335566667888987543 44433
No 72
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=99.36 E-value=1.9e-12 Score=113.79 Aligned_cols=145 Identities=19% Similarity=0.231 Sum_probs=102.4
Q ss_pred CCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeec-------------------------CCHH
Q 027408 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-------------------------EDLD 87 (223)
Q Consensus 33 ~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-------------------------~~l~ 87 (223)
.+.+++|+|+|+|.||..+|+.++++|++|+++|+++...+.+.++|..+. .+++
T Consensus 181 ~v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~ 260 (381)
T 3p2y_A 181 TVKPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALE 260 (381)
T ss_dssp EECCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHH
T ss_pred CcCCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHH
Confidence 578999999999999999999999999999999998765555666665432 2567
Q ss_pred hhcccCCEEEEcC--CCChhhhhcccHHHHhcCCCCcEEEEcC--CCCccCHHHHHHHHHhCCccEEEeeCCCCCCCCCC
Q 027408 88 TMLPKCDIVVVNT--PLTEKTRGMFDKDRIAKMKKGVLIVNNA--RGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKD 163 (223)
Q Consensus 88 e~l~~aDvVv~~~--p~~~~t~~~i~~~~~~~mk~ga~ivn~s--rg~~vd~~al~~~L~~g~i~~a~lDv~~~ep~~~~ 163 (223)
++++++|+|+.++ |. ..+..+++++.++.||+|++|||++ +|+.+. ...|..
T Consensus 261 e~l~~aDIVI~tv~iPg-~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~e---------------------~t~~~~-- 316 (381)
T 3p2y_A 261 DAITKFDIVITTALVPG-RPAPRLVTAAAATGMQPGSVVVDLAGETGGNCE---------------------LTEPGR-- 316 (381)
T ss_dssp HHHTTCSEEEECCCCTT-SCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBT---------------------TCCTTC--
T ss_pred HHHhcCCEEEECCCCCC-cccceeecHHHHhcCCCCcEEEEEeCCCCCccc---------------------cccCCC--
Confidence 8899999999875 43 2345688999999999999999998 444321 112211
Q ss_pred CCccCCCC--eEEccCCCCC-cHHHHHHHHHHHHHHHHHHHcC
Q 027408 164 HPWRYMPN--QAMTPHVSGT-TIDAQLRYAAGVKDMLDRYFKG 203 (223)
Q Consensus 164 ~~l~~~~n--v~~tPH~a~~-t~~~~~~~~~~~~~~i~~~~~g 203 (223)
. +.... +++-|++.+. ..++...+...+.+.+..+++.
T Consensus 317 -~-~~~~gV~~~~v~nlP~~vp~tAS~~~s~~l~~~l~~~~~~ 357 (381)
T 3p2y_A 317 -T-IVHHGVTITSPLNLPATMPEHASELYAKNVTALLDLLLTD 357 (381)
T ss_dssp -E-EEETTEEEECCSCTGGGSHHHHHHHHHHHHHHHHHHHEET
T ss_pred -e-EEECCEEEEeeCCCchhhHHHHHHHHHHHHHHHHHHHhhC
Confidence 1 22233 4556677654 3456666665566655555543
No 73
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.36 E-value=9.9e-13 Score=111.70 Aligned_cols=112 Identities=17% Similarity=0.224 Sum_probs=90.3
Q ss_pred CEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhccc--HHH
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD--KDR 114 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~--~~~ 114 (223)
++|+|||+|.||+.+|+.|...|++|.+||+++...+...+.|+....+++++++++|+|++++|....+..++. ++.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l 84 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQACENNQKVAAASDIIFTSLPNAGIVETVMNGPGGV 84 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHcCcchH
Confidence 689999999999999999999999999999975433334444777777899999999999999996665666553 255
Q ss_pred HhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCcc
Q 027408 115 IAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (223)
Q Consensus 115 ~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~ 148 (223)
.+.++++++||+++.|...+.+.+.+.+.+..+.
T Consensus 85 ~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g~~ 118 (301)
T 3cky_A 85 LSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGID 118 (301)
T ss_dssp HHHSCTTCEEEECCCCCHHHHHHHHHHHHHTTCE
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCe
Confidence 6778999999999998877778888888775444
No 74
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.35 E-value=2.6e-12 Score=117.15 Aligned_cols=119 Identities=11% Similarity=0.129 Sum_probs=96.3
Q ss_pred CCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHh-----hCCeecCCHHhhccc---CCEEEEcCCCChhhh
Q 027408 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE-----TGAKFEEDLDTMLPK---CDIVVVNTPLTEKTR 107 (223)
Q Consensus 36 g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~-----~g~~~~~~l~e~l~~---aDvVv~~~p~~~~t~ 107 (223)
..+|||||+|.||+.+|..|...|++|.+|||++...+.... .++....+++++++. +|+|++++|....+.
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~ 89 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKAGAPVD 89 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECCCSSHHHH
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEcCChHHHH
Confidence 458999999999999999999999999999998744443333 466667789998876 999999999777777
Q ss_pred hcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCC
Q 027408 108 GMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVW 155 (223)
Q Consensus 108 ~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~ 155 (223)
.++ ++....+++|.+||+++.+...+...+.+.+.+..+.....-|.
T Consensus 90 ~vl-~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v~~pVs 136 (497)
T 2p4q_A 90 ALI-NQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFVGSGVS 136 (497)
T ss_dssp HHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHH-HHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCceeCCCcc
Confidence 766 56778899999999999998888888988888765554433333
No 75
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.35 E-value=6e-13 Score=110.52 Aligned_cols=98 Identities=14% Similarity=0.210 Sum_probs=69.2
Q ss_pred cccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCC---------------hhHHHhhCCeecCCHHhhcccCC
Q 027408 30 RAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMD---------------PQLEKETGAKFEEDLDTMLPKCD 94 (223)
Q Consensus 30 ~~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~---------------~~~~~~~g~~~~~~l~e~l~~aD 94 (223)
...++.+++|||||+|.||+.+|+.|...|++|++|||++.. .+.....+.....++++++++||
T Consensus 13 ~~~~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD 92 (245)
T 3dtt_A 13 ENLYFQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFADVAAGAE 92 (245)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHHHHHHHCS
T ss_pred cccccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHHHHHhcCC
Confidence 356899999999999999999999999999999999997532 11122234444568899999999
Q ss_pred EEEEcCCCChhhhhcccHHH-HhcCCCCcEEEEcCCC
Q 027408 95 IVVVNTPLTEKTRGMFDKDR-IAKMKKGVLIVNNARG 130 (223)
Q Consensus 95 vVv~~~p~~~~t~~~i~~~~-~~~mk~ga~ivn~srg 130 (223)
+|++++|......-+ .+. ...+ ++++||+++.|
T Consensus 93 vVilavp~~~~~~~~--~~i~~~~l-~g~ivi~~s~~ 126 (245)
T 3dtt_A 93 LVVNATEGASSIAAL--TAAGAENL-AGKILVDIANP 126 (245)
T ss_dssp EEEECSCGGGHHHHH--HHHCHHHH-TTSEEEECCCC
T ss_pred EEEEccCcHHHHHHH--HHhhhhhc-CCCEEEECCCC
Confidence 999999955443222 233 3334 89999999943
No 76
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.34 E-value=1.2e-12 Score=110.85 Aligned_cols=111 Identities=15% Similarity=0.119 Sum_probs=88.9
Q ss_pred CEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhcccH--HH
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDK--DR 114 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~--~~ 114 (223)
++|+|||+|.||+.+|+.|...|++|.+|| ++...+...+.|+....+++++++++|+|++|+|....+..++.. +.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l 82 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGPVADELLSLGAVNVETARQVTEFADIIFIMVPDTPQVEDVLFGEHGC 82 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCBCCSSHHHHHHTCSEEEECCSSHHHHHHHHHSTTSS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCcccCCHHHHHhcCCEEEEECCCHHHHHHHHhCchhH
Confidence 589999999999999999999999999999 765555444557766778999999999999999965545444421 34
Q ss_pred HhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCcc
Q 027408 115 IAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (223)
Q Consensus 115 ~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~ 148 (223)
.+.++++++||+++.+...+.+.+.+.+.+..+.
T Consensus 83 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~ 116 (295)
T 1yb4_A 83 AKTSLQGKTIVDMSSISPIETKRFAQRVNEMGAD 116 (295)
T ss_dssp TTSCCTTEEEEECSCCCHHHHHHHHHHHHTTTEE
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCe
Confidence 4568899999999999878888899988874443
No 77
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=99.33 E-value=6.6e-12 Score=110.92 Aligned_cols=99 Identities=22% Similarity=0.300 Sum_probs=81.2
Q ss_pred CCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeec--CC-------------------------
Q 027408 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE--ED------------------------- 85 (223)
Q Consensus 33 ~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~--~~------------------------- 85 (223)
++.|++|+|+|+|.+|..+++.++.+|++|+++|+++...+..+.+|.... +.
T Consensus 169 ~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~ 248 (384)
T 1l7d_A 169 TVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA 248 (384)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhH
Confidence 689999999999999999999999999999999998766666666776543 11
Q ss_pred --HHhhcccCCEEEEcC--CCChhhhhcccHHHHhcCCCCcEEEEcC--CCCc
Q 027408 86 --LDTMLPKCDIVVVNT--PLTEKTRGMFDKDRIAKMKKGVLIVNNA--RGAI 132 (223)
Q Consensus 86 --l~e~l~~aDvVv~~~--p~~~~t~~~i~~~~~~~mk~ga~ivn~s--rg~~ 132 (223)
++++++++|+|+.++ |..+ +..+++++.++.||++++|||++ ||+.
T Consensus 249 ~~l~~~~~~aDvVi~~~~~pg~~-~~~li~~~~l~~mk~g~vivdva~~~gg~ 300 (384)
T 1l7d_A 249 EAVLKELVKTDIAITTALIPGKP-APVLITEEMVTKMKPGSVIIDLAVEAGGN 300 (384)
T ss_dssp HHHHHHHTTCSEEEECCCCTTSC-CCCCSCHHHHTTSCTTCEEEETTGGGTCS
T ss_pred HHHHHHhCCCCEEEECCccCCCC-CCeeeCHHHHhcCCCCCEEEEEecCCCCC
Confidence 677888999999877 4332 34678899999999999999999 6653
No 78
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=99.33 E-value=4.5e-12 Score=112.32 Aligned_cols=100 Identities=20% Similarity=0.291 Sum_probs=81.4
Q ss_pred CCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeec-----------------------------
Q 027408 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE----------------------------- 83 (223)
Q Consensus 33 ~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~----------------------------- 83 (223)
.+.+.+|+|+|+|.+|..+|+.++.+|++|+++|+++...+.++++|..+.
T Consensus 187 ~v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~ 266 (405)
T 4dio_A 187 TVPAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQA 266 (405)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHH
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhH
Confidence 478999999999999999999999999999999998755555556665421
Q ss_pred CCHHhhcccCCEEEEcC--CCChhhhhcccHHHHhcCCCCcEEEEcC--CCCcc
Q 027408 84 EDLDTMLPKCDIVVVNT--PLTEKTRGMFDKDRIAKMKKGVLIVNNA--RGAIM 133 (223)
Q Consensus 84 ~~l~e~l~~aDvVv~~~--p~~~~t~~~i~~~~~~~mk~ga~ivn~s--rg~~v 133 (223)
.+++++++++|+|+.++ |.. ....+++++.++.||+|++|||+| +|+.+
T Consensus 267 ~~l~e~l~~aDVVI~tvlipg~-~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~ 319 (405)
T 4dio_A 267 ALVAEHIAKQDIVITTALIPGR-PAPRLVTREMLDSMKPGSVVVDLAVERGGNI 319 (405)
T ss_dssp HHHHHHHHTCSEEEECCCCSSS-CCCCCBCHHHHTTSCTTCEEEETTGGGTCSB
T ss_pred hHHHHHhcCCCEEEECCcCCCC-CCCEEecHHHHhcCCCCCEEEEEeCCCCCCc
Confidence 15678889999999875 432 346788999999999999999998 55533
No 79
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.33 E-value=7.2e-12 Score=106.90 Aligned_cols=136 Identities=13% Similarity=0.105 Sum_probs=87.7
Q ss_pred HHHHHHcCCCccCcccCcccCCCCCEEEEEc-ccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcc
Q 027408 13 GHHQVISGEWNVAGVAYRAYDLEGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLP 91 (223)
Q Consensus 13 ~~~~~~~~~w~~~~~~~~~~~l~g~~igIiG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~ 91 (223)
+...+++..|.... ...++|+||| +|.||.++|+.|+..|++|.++|+++. .+.+++++
T Consensus 5 ~~~~~~~~~~~~~~-------~~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~-------------~~~~~~~~ 64 (298)
T 2pv7_A 5 SYANENQFGFKTIN-------SDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW-------------AVAESILA 64 (298)
T ss_dssp --------CCCCSC-------TTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG-------------GGHHHHHT
T ss_pred HHhhhhccCccccC-------CCCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc-------------cCHHHHhc
Confidence 34556667785321 1356899999 999999999999999999999998652 15677889
Q ss_pred cCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCCCCCC-CCCCccCCC
Q 027408 92 KCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAP-KDHPWRYMP 170 (223)
Q Consensus 92 ~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~ep~~-~~~~l~~~~ 170 (223)
+||+|++|+|... +..++ ++....++++++|++++..+....+++.+.+ ... .+. ..|.. +..+++...
T Consensus 65 ~aDvVilavp~~~-~~~vl-~~l~~~l~~~~iv~~~~svk~~~~~~~~~~~---~~~--~v~---~hP~~g~~~~~~~g~ 134 (298)
T 2pv7_A 65 NADVVIVSVPINL-TLETI-ERLKPYLTENMLLADLTSVKREPLAKMLEVH---TGA--VLG---LHPMFGADIASMAKQ 134 (298)
T ss_dssp TCSEEEECSCGGG-HHHHH-HHHGGGCCTTSEEEECCSCCHHHHHHHHHHC---SSE--EEE---EEECSCTTCSCCTTC
T ss_pred CCCEEEEeCCHHH-HHHHH-HHHHhhcCCCcEEEECCCCCcHHHHHHHHhc---CCC--EEe---eCCCCCCCchhhcCC
Confidence 9999999999543 44444 4566778999999999876543344444432 122 121 22321 122455556
Q ss_pred CeEEccCC
Q 027408 171 NQAMTPHV 178 (223)
Q Consensus 171 nv~~tPH~ 178 (223)
.+++|||-
T Consensus 135 ~~~l~~~~ 142 (298)
T 2pv7_A 135 VVVRCDGR 142 (298)
T ss_dssp EEEEEEEE
T ss_pred eEEEecCC
Confidence 78999964
No 80
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.32 E-value=1.5e-12 Score=110.40 Aligned_cols=109 Identities=16% Similarity=0.231 Sum_probs=85.1
Q ss_pred CEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhcccH--HH
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDK--DR 114 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~--~~ 114 (223)
++|+|||+|.||+.+|+.|...|++|.+|||++...+...+.|+....+++++++++|+|++|+|....+..++.. ..
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~~vp~~~~~~~v~~~~~~~ 80 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGI 80 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTSG
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHhCchhH
Confidence 4799999999999999999999999999999764444445557777778999999999999999866565554432 13
Q ss_pred HhcCCCCcEEEEcCCCCccCHHHHHHHHHhC
Q 027408 115 IAKMKKGVLIVNNARGAIMDTQAVVDACSSG 145 (223)
Q Consensus 115 ~~~mk~ga~ivn~srg~~vd~~al~~~L~~g 145 (223)
++.+++++++|+++.....+...+.+.+.+.
T Consensus 81 ~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~~ 111 (296)
T 2gf2_A 81 LKKVKKGSLLIDSSTIDPAVSKELAKEVEKM 111 (296)
T ss_dssp GGTCCTTCEEEECSCCCHHHHHHHHHHHHHT
T ss_pred HhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 4567899999998777766666777777653
No 81
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.32 E-value=2.5e-12 Score=108.45 Aligned_cols=109 Identities=12% Similarity=0.142 Sum_probs=86.8
Q ss_pred CEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhcccHHHHh
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIA 116 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~~ 116 (223)
++|+|||+|.||..+|+.|.. |++|.+||+++...+...+.|+...+ ++++++++|+|++|+|....+..++ ++..+
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~D~vi~~v~~~~~~~~v~-~~l~~ 78 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEAV-PLERVAEARVIFTCLPTTREVYEVA-EALYP 78 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEEC-CGGGGGGCSEEEECCSSHHHHHHHH-HHHTT
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCcccC-HHHHHhCCCEEEEeCCChHHHHHHH-HHHHh
Confidence 479999999999999999999 99999999976433334444555554 7788889999999999655555554 55667
Q ss_pred cCCCCcEEEEcCCCCccCHHHHHHHHHhCCcc
Q 027408 117 KMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (223)
Q Consensus 117 ~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~ 148 (223)
.+++++++|+++.+...+.+.+.+.+.+..+.
T Consensus 79 ~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~ 110 (289)
T 2cvz_A 79 YLREGTYWVDATSGEPEASRRLAERLREKGVT 110 (289)
T ss_dssp TCCTTEEEEECSCCCHHHHHHHHHHHHTTTEE
T ss_pred hCCCCCEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 88999999999998888888899988875443
No 82
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.32 E-value=3.2e-12 Score=109.54 Aligned_cols=113 Identities=14% Similarity=0.198 Sum_probs=89.6
Q ss_pred CCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhcccH--H
Q 027408 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDK--D 113 (223)
Q Consensus 36 g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~--~ 113 (223)
-++|+|||+|.||+.+|+.|...|++|.+||+++...+...+.|+....+++++++++|+|++++|....+..++.. .
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~DvVi~av~~~~~~~~v~~~~~~ 109 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSG 109 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEEcCCHHHHHhcCCEEEEeCCCHHHHHHHHcCchh
Confidence 36899999999999999999999999999999865444455567776778999999999999999965555544322 1
Q ss_pred HHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCcc
Q 027408 114 RIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (223)
Q Consensus 114 ~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~ 148 (223)
.++.++++.++|+++.+.....+.+.+.+....+.
T Consensus 110 ~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~~ 144 (316)
T 2uyy_A 110 VLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGR 144 (316)
T ss_dssp GGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred HhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 34678899999999998777778888888665444
No 83
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.31 E-value=4.5e-12 Score=115.12 Aligned_cols=118 Identities=12% Similarity=0.110 Sum_probs=94.3
Q ss_pred CEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHh-----hCCeecCCHHhhc---ccCCEEEEcCCCChhhhh
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE-----TGAKFEEDLDTML---PKCDIVVVNTPLTEKTRG 108 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~-----~g~~~~~~l~e~l---~~aDvVv~~~p~~~~t~~ 108 (223)
++|||||+|.||+.+|..|...|++|.+|||++...+...+ .++....++++++ +++|+|++++|....+..
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~ 82 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDN 82 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEeCCChHHHHH
Confidence 57999999999999999999999999999998644333333 4566677899987 489999999997666766
Q ss_pred cccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCC
Q 027408 109 MFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVW 155 (223)
Q Consensus 109 ~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~ 155 (223)
++ ++....++++.+||+++.+...+...+.+.+.+..+......|+
T Consensus 83 vl-~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v~~pv~ 128 (482)
T 2pgd_A 83 FI-EKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGSGVS 128 (482)
T ss_dssp HH-HHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HH-HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEeCCCCC
Confidence 66 46777899999999999998888888888888765554444443
No 84
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.31 E-value=5e-12 Score=114.62 Aligned_cols=118 Identities=14% Similarity=0.152 Sum_probs=93.9
Q ss_pred CEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHH-hh---CCeecCCHHhhccc---CCEEEEcCCCChhhhhc
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEK-ET---GAKFEEDLDTMLPK---CDIVVVNTPLTEKTRGM 109 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~-~~---g~~~~~~l~e~l~~---aDvVv~~~p~~~~t~~~ 109 (223)
++|||||+|.||+.+|..|...|++|.+|||++...+... .. ++....+++++++. +|+|++++|....+..+
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~~v 85 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDAT 85 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTTHHHHHH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCchHHHHH
Confidence 5799999999999999999999999999999753333332 22 66667789998876 99999999977666666
Q ss_pred ccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCC
Q 027408 110 FDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVW 155 (223)
Q Consensus 110 i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~ 155 (223)
+ ++....+++|.+||+++.+...+...+.+.+.+..+......|.
T Consensus 86 l-~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~v~~pv~ 130 (474)
T 2iz1_A 86 I-KSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINFIGTGVS 130 (474)
T ss_dssp H-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEEEEEEEC
T ss_pred H-HHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeEECCCCC
Confidence 6 56677899999999999998888888888887766654444443
No 85
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=99.29 E-value=3.4e-11 Score=103.93 Aligned_cols=141 Identities=13% Similarity=0.075 Sum_probs=97.2
Q ss_pred CCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHH-----------hhC--------------CeecCCHHhhc
Q 027408 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEK-----------ETG--------------AKFEEDLDTML 90 (223)
Q Consensus 36 g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~-----------~~g--------------~~~~~~l~e~l 90 (223)
-++|+|||+|.||..+|..+...|++|.+||+++...+... +.| +...+++++++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~eav 85 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAV 85 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHT
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHHHH
Confidence 46899999999999999999999999999999763322221 112 34567899999
Q ss_pred ccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCCCCCCCCCCccCCC
Q 027408 91 PKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMP 170 (223)
Q Consensus 91 ~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~ep~~~~~~l~~~~ 170 (223)
++||+|+.++|.+.+.+..+..+..+.++++++|++.+.+ +....+.+.+.. ..+..+..-+. |.. ..+
T Consensus 86 ~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~--i~~~~la~~~~~-~~r~ig~Hp~~--P~~------~~~ 154 (319)
T 2dpo_A 86 EGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC--LLPSKLFTGLAH-VKQCIVAHPVN--PPY------YIP 154 (319)
T ss_dssp TTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS--CCHHHHHTTCTT-GGGEEEEEECS--STT------TCC
T ss_pred hcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCC--hHHHHHHHhcCC-CCCeEEeecCC--chh------hcc
Confidence 9999999999987776666667788889999999877665 445566666543 33444555333 321 234
Q ss_pred CeEEccCCCCCcHHHHHH
Q 027408 171 NQAMTPHVSGTTIDAQLR 188 (223)
Q Consensus 171 nv~~tPH~a~~t~~~~~~ 188 (223)
-+.++|+-. .+.+..++
T Consensus 155 lveiv~g~~-t~~e~~~~ 171 (319)
T 2dpo_A 155 LVELVPHPE-TSPATVDR 171 (319)
T ss_dssp EEEEEECTT-CCHHHHHH
T ss_pred eEEEeCCCC-CCHHHHHH
Confidence 466777532 34444443
No 86
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.28 E-value=6.2e-12 Score=114.12 Aligned_cols=119 Identities=13% Similarity=0.131 Sum_probs=93.3
Q ss_pred CEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHH-HhhC-------CeecCCHHhhccc---CCEEEEcCCCChh
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLE-KETG-------AKFEEDLDTMLPK---CDIVVVNTPLTEK 105 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~-~~~g-------~~~~~~l~e~l~~---aDvVv~~~p~~~~ 105 (223)
++|||||+|.||+.+|..|...|++|.+|||++...+.. +..+ +....+++++++. +|+|++++|....
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp~~~~ 81 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAA 81 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecCChHH
Confidence 479999999999999999999999999999975333322 2334 5566789898864 9999999997666
Q ss_pred hhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCC
Q 027408 106 TRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWN 156 (223)
Q Consensus 106 t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~ 156 (223)
+..++ ++....++++.+||+++.|...+...+.+.+.+..+......|..
T Consensus 82 v~~vl-~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~~pv~g 131 (478)
T 1pgj_A 82 TDSTI-EQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMGISG 131 (478)
T ss_dssp HHHHH-HHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEEEEES
T ss_pred HHHHH-HHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEEeeccC
Confidence 66665 566778999999999999988888888888887666544444443
No 87
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.25 E-value=8.9e-12 Score=108.28 Aligned_cols=136 Identities=18% Similarity=0.191 Sum_probs=93.7
Q ss_pred CCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCC-hhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhccc
Q 027408 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMD-PQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 111 (223)
Q Consensus 33 ~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~ 111 (223)
.+.+++|+|||+|.||+++|+.|+..|++|++++++... .+.+...|+... ++++++++||+|++|+|.... ..++.
T Consensus 13 ~l~~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~~~-~~~e~~~~aDvVilavp~~~~-~~v~~ 90 (338)
T 1np3_A 13 IIQGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVA-DVKTAVAAADVVMILTPDEFQ-GRLYK 90 (338)
T ss_dssp HHHTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEE-CHHHHHHTCSEEEECSCHHHH-HHHHH
T ss_pred hhcCCEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCCEEc-cHHHHHhcCCEEEEeCCcHHH-HHHHH
Confidence 578999999999999999999999999999999997643 445566777655 888999999999999994332 33433
Q ss_pred HHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCCCCCCCCCC---ccC---CCCeEEccCCC
Q 027408 112 KDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHP---WRY---MPNQAMTPHVS 179 (223)
Q Consensus 112 ~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~ep~~~~~~---l~~---~~nv~~tPH~a 179 (223)
++....++++++|++++ | +.. ..+.+. ....+||+...|..+.+. ++. ..++++|||-.
T Consensus 91 ~~i~~~l~~~~ivi~~~-g--v~~--~~~~~~----~~~~~~vv~~~P~gp~~a~~~l~~~G~g~~~ii~~~~~ 155 (338)
T 1np3_A 91 EEIEPNLKKGATLAFAH-G--FSI--HYNQVV----PRADLDVIMIAPKAPGHTVRSEFVKGGGIPDLIAIYQD 155 (338)
T ss_dssp HHTGGGCCTTCEEEESC-C--HHH--HTTSSC----CCTTCEEEEEEESSCSHHHHHHHHTTCCCCEEEEEEEC
T ss_pred HHHHhhCCCCCEEEEcC-C--chh--HHHhhc----CCCCcEEEeccCCCCchhHHHHHhccCCCeEEEEecCC
Confidence 36667899999999874 2 222 222111 112344554455433322 333 45688899854
No 88
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.25 E-value=4.7e-11 Score=101.83 Aligned_cols=138 Identities=14% Similarity=0.155 Sum_probs=93.8
Q ss_pred CCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhh-------CCeecCCHHhhcccCCEEEEcCCCChhh
Q 027408 34 LEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKET-------GAKFEEDLDTMLPKCDIVVVNTPLTEKT 106 (223)
Q Consensus 34 l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~-------g~~~~~~l~e~l~~aDvVv~~~p~~~~t 106 (223)
-..|+|||||+|.||..+|..+. .|++|++||+++...+.+... ++...+++++ +++||+|+.++|.+.+.
T Consensus 10 ~~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~aDlVieavpe~~~v 87 (293)
T 1zej_A 10 HHHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQIPEELLSKIEFTTTLEK-VKDCDIVMEAVFEDLNT 87 (293)
T ss_dssp --CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHSCGGGGGGEEEESSCTT-GGGCSEEEECCCSCHHH
T ss_pred cCCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCHHH-HcCCCEEEEcCcCCHHH
Confidence 46789999999999999999999 999999999986444433333 4555667776 88999999999988877
Q ss_pred hhcccHHHHhcCCCCcEEE-EcCCCCccCHHHHHHHHHhCCccEEEeeCCCCCCCCCCCCccCCCCeEEccCCCCCcHHH
Q 027408 107 RGMFDKDRIAKMKKGVLIV-NNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDA 185 (223)
Q Consensus 107 ~~~i~~~~~~~mk~ga~iv-n~srg~~vd~~al~~~L~~g~i~~a~lDv~~~ep~~~~~~l~~~~nv~~tPH~a~~t~~~ 185 (223)
+..+..+ +..+ ++++++ |+|.- +...+.+.+. ...+..++..+. |.+ ..+-+.++|+-. .+.+.
T Consensus 88 k~~l~~~-l~~~-~~~IlasntSti---~~~~~a~~~~-~~~r~~G~Hf~~--Pv~------~~~lveiv~g~~-t~~~~ 152 (293)
T 1zej_A 88 KVEVLRE-VERL-TNAPLCSNTSVI---SVDDIAERLD-SPSRFLGVHWMN--PPH------VMPLVEIVISRF-TDSKT 152 (293)
T ss_dssp HHHHHHH-HHTT-CCSCEEECCSSS---CHHHHHTTSS-CGGGEEEEEECS--STT------TCCEEEEEECTT-CCHHH
T ss_pred HHHHHHH-HhcC-CCCEEEEECCCc---CHHHHHHHhh-cccceEeEEecC--ccc------cCCEEEEECCCC-CCHHH
Confidence 7666554 5566 999885 67663 3445554442 233455666554 332 235566777422 34555
Q ss_pred HHH
Q 027408 186 QLR 188 (223)
Q Consensus 186 ~~~ 188 (223)
.++
T Consensus 153 ~~~ 155 (293)
T 1zej_A 153 VAF 155 (293)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 89
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.24 E-value=1.1e-11 Score=103.69 Aligned_cols=101 Identities=15% Similarity=0.248 Sum_probs=78.6
Q ss_pred CCCCCEEEEEcccHHHHHHHHHHccCCCe-EEEEcCCCCChhH-HHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhcc
Q 027408 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNCN-LLYHDRVKMDPQL-EKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMF 110 (223)
Q Consensus 33 ~l~g~~igIiG~G~iG~~iA~~l~~~G~~-V~~~d~~~~~~~~-~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i 110 (223)
++.+++|+|||+|.||+.+|+.+...|++ |.+||+++...+. .+..++....+++++++++|+|++++|... ...++
T Consensus 7 ~~~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~~~~-~~~v~ 85 (266)
T 3d1l_A 7 SIEDTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLKDSA-FAELL 85 (266)
T ss_dssp CGGGCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCCHHH-HHHHH
T ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecCHHH-HHHHH
Confidence 46678999999999999999999988998 8999997533332 333477767789999999999999999442 23333
Q ss_pred cHHHHhcCCCCcEEEEcCCCCccCH
Q 027408 111 DKDRIAKMKKGVLIVNNARGAIMDT 135 (223)
Q Consensus 111 ~~~~~~~mk~ga~ivn~srg~~vd~ 135 (223)
++..+.+++++++|+++.|...+.
T Consensus 86 -~~l~~~~~~~~ivv~~s~~~~~~~ 109 (266)
T 3d1l_A 86 -QGIVEGKREEALMVHTAGSIPMNV 109 (266)
T ss_dssp -HHHHTTCCTTCEEEECCTTSCGGG
T ss_pred -HHHHhhcCCCcEEEECCCCCchHH
Confidence 455667889999999999876543
No 90
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=99.23 E-value=2.7e-11 Score=109.46 Aligned_cols=96 Identities=20% Similarity=0.260 Sum_probs=80.4
Q ss_pred ccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhcc
Q 027408 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMF 110 (223)
Q Consensus 31 ~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i 110 (223)
+..|.|++++|+|+|.||+.+|+.|+++|++|+++|+++.....+...++. +.++++++..+|+|+.+.. +..++
T Consensus 260 g~~L~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~d-v~~lee~~~~aDvVi~atG----~~~vl 334 (488)
T 3ond_A 260 DVMIAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQ-VLTLEDVVSEADIFVTTTG----NKDII 334 (488)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-ECCGGGTTTTCSEEEECSS----CSCSB
T ss_pred CCcccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCc-cCCHHHHHHhcCEEEeCCC----Chhhh
Confidence 346899999999999999999999999999999999875333344445554 3588999999999987654 56678
Q ss_pred cHHHHhcCCCCcEEEEcCCCC
Q 027408 111 DKDRIAKMKKGVLIVNNARGA 131 (223)
Q Consensus 111 ~~~~~~~mk~ga~ivn~srg~ 131 (223)
+.+.++.||++++|+|++++.
T Consensus 335 ~~e~l~~mk~gaiVvNaG~~~ 355 (488)
T 3ond_A 335 MLDHMKKMKNNAIVCNIGHFD 355 (488)
T ss_dssp CHHHHTTSCTTEEEEESSSTT
T ss_pred hHHHHHhcCCCeEEEEcCCCC
Confidence 899999999999999999983
No 91
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.22 E-value=1.2e-11 Score=103.15 Aligned_cols=103 Identities=13% Similarity=0.165 Sum_probs=79.2
Q ss_pred CEEEEEcccHHHHHHHHHHccCCCeEEEEcCC--CCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhcccHHH
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRV--KMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDR 114 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~--~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~ 114 (223)
++|+|||+|.||..+|+.|...|++|++||+. +...+...+.|+. .+++++++++|+|++|+|.......+ .+.
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~aDvvi~~v~~~~~~~~~--~~~ 76 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVT--ETSEEDVYSCPVVISAVTPGVALGAA--RRA 76 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCE--ECCHHHHHTSSEEEECSCGGGHHHHH--HHH
T ss_pred CeEEEEechHHHHHHHHHHHHCCCeEEEeCCccCHHHHHHHHHCCCc--CCHHHHHhcCCEEEEECCCHHHHHHH--HHH
Confidence 48999999999999999999999999999873 2112223334665 57888899999999999965555443 466
Q ss_pred HhcCCCCcEEEEcCCCCccCHHHHHHHHHhC
Q 027408 115 IAKMKKGVLIVNNARGAIMDTQAVVDACSSG 145 (223)
Q Consensus 115 ~~~mk~ga~ivn~srg~~vd~~al~~~L~~g 145 (223)
.+.+++ ++|+++.+...+.+.+.+.+.+.
T Consensus 77 ~~~~~~--~vi~~s~~~~~~~~~l~~~~~~~ 105 (264)
T 1i36_A 77 GRHVRG--IYVDINNISPETVRMASSLIEKG 105 (264)
T ss_dssp HTTCCS--EEEECSCCCHHHHHHHHHHCSSS
T ss_pred HHhcCc--EEEEccCCCHHHHHHHHHHHhhC
Confidence 677776 99999888777777888887653
No 92
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=99.19 E-value=2.1e-11 Score=109.74 Aligned_cols=97 Identities=16% Similarity=0.216 Sum_probs=77.8
Q ss_pred cCCCC-CEEEEEcccHHHHHHHHHHccC------CCeEEEEcCC-CCChhHHHhhCCee----cCCHHhhcccCCEEEEc
Q 027408 32 YDLEG-KTVGTVGCGRIGKLLLQRLKPF------NCNLLYHDRV-KMDPQLEKETGAKF----EEDLDTMLPKCDIVVVN 99 (223)
Q Consensus 32 ~~l~g-~~igIiG~G~iG~~iA~~l~~~------G~~V~~~d~~-~~~~~~~~~~g~~~----~~~l~e~l~~aDvVv~~ 99 (223)
..|.| ++|||||+|.||.++|+.|+.. |++|++.++. ....+.+...|+.. ..++++++++||+|+++
T Consensus 49 ~~L~GiKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G~~v~d~ta~s~aEAa~~ADVVILa 128 (525)
T 3fr7_A 49 EAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVLLL 128 (525)
T ss_dssp HHTTTCSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCTTTTCEEEHHHHHHHCSEEEEC
T ss_pred HHhcCCCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCCCEEecCCCCCHHHHHhcCCEEEEC
Confidence 46899 9999999999999999999988 9998766554 45566677778764 25799999999999999
Q ss_pred CCCChhhhhcccHHHHhcCCCCcEEEEcCCCC
Q 027408 100 TPLTEKTRGMFDKDRIAKMKKGVLIVNNARGA 131 (223)
Q Consensus 100 ~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~ 131 (223)
+|..... .++ .+.+..||+|++ |..+.|-
T Consensus 129 VP~~~~~-eVl-~eI~p~LK~GaI-Ls~AaGf 157 (525)
T 3fr7_A 129 ISDAAQA-DNY-EKIFSHMKPNSI-LGLSHGF 157 (525)
T ss_dssp SCHHHHH-HHH-HHHHHHSCTTCE-EEESSSH
T ss_pred CChHHHH-HHH-HHHHHhcCCCCe-EEEeCCC
Confidence 9965553 344 478899999998 5666774
No 93
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=99.18 E-value=2.7e-11 Score=109.57 Aligned_cols=138 Identities=11% Similarity=0.166 Sum_probs=93.9
Q ss_pred CEEEEEcccHHHHHHHHHHccC--CCeEEEEcCCCCChhHHH---------------h----hCCeecCCHHhhcccCCE
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPF--NCNLLYHDRVKMDPQLEK---------------E----TGAKFEEDLDTMLPKCDI 95 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~--G~~V~~~d~~~~~~~~~~---------------~----~g~~~~~~l~e~l~~aDv 95 (223)
++|+|||+|.||..+|..|... |++|++||+++...+... . .++...+++++.+++||+
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~aDv 85 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADL 85 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSE
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhcCCE
Confidence 6899999999999999999877 899999999753222211 0 234555688888999999
Q ss_pred EEEcCCCChhhhh-----------c--ccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEee-CCCCCCCC
Q 027408 96 VVVNTPLTEKTRG-----------M--FDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGD-VWNPQPAP 161 (223)
Q Consensus 96 Vv~~~p~~~~t~~-----------~--i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lD-v~~~ep~~ 161 (223)
|++|+|....... + ..++..+.++++++||+.|...+-..+.+.+.+.+....+.... ++.+|+..
T Consensus 86 ViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~~~~~~d~~V~~~Pe~~~ 165 (467)
T 2q3e_A 86 VFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSNPEFLA 165 (467)
T ss_dssp EEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHTCCTTCEEEEEECCCCCC
T ss_pred EEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHHhCCCCCCeEEEeCHHHhh
Confidence 9999984433221 1 12456678899999999999888778888888887643211112 24555544
Q ss_pred CCCC---ccCCCCeEE
Q 027408 162 KDHP---WRYMPNQAM 174 (223)
Q Consensus 162 ~~~~---l~~~~nv~~ 174 (223)
+... +...+++++
T Consensus 166 ~G~~~~d~~~~~rivv 181 (467)
T 2q3e_A 166 EGTAIKDLKNPDRVLI 181 (467)
T ss_dssp TTSHHHHHHSCSCEEE
T ss_pred cccchhhccCCCEEEE
Confidence 4332 234455543
No 94
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=98.79 E-value=2.5e-12 Score=103.98 Aligned_cols=94 Identities=16% Similarity=0.198 Sum_probs=74.1
Q ss_pred CCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhcccHH
Q 027408 34 LEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKD 113 (223)
Q Consensus 34 l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~ 113 (223)
+.+++|+|||+|.||+.+|+.|...|++|.+|+|++. .+.....++... +++++++++|+|++++|.. .+..++ +
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~g~~~~-~~~~~~~~aDvVilav~~~-~~~~v~--~ 91 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ-VSSLLPRGAEVL-CYSEAASRSDVIVLAVHRE-HYDFLA--E 91 (201)
Confidence 6788999999999999999999999999999999764 222233455544 7888899999999999964 455554 2
Q ss_pred HHhcCCCCcEEEEcCCCCcc
Q 027408 114 RIAKMKKGVLIVNNARGAIM 133 (223)
Q Consensus 114 ~~~~mk~ga~ivn~srg~~v 133 (223)
+..++++++|||+++|-..
T Consensus 92 -l~~~~~~~ivI~~~~G~~~ 110 (201)
T 2yjz_A 92 -LADSLKGRVLIDVSNNQKM 110 (201)
Confidence 4456789999999999853
No 95
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=99.16 E-value=1.7e-10 Score=96.53 Aligned_cols=108 Identities=14% Similarity=0.158 Sum_probs=81.2
Q ss_pred cCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCC-hhHHHhhCCeecCCHHhhcccCCEEEEcCCCCh--hhhh
Q 027408 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMD-PQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTE--KTRG 108 (223)
Q Consensus 32 ~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~--~t~~ 108 (223)
.++.| +++|||+|.||+.+++.|...|++|.++||+... .+.++.++.. ..+++++ +++|+|++|+|... .+..
T Consensus 113 ~~l~~-~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~-~~~~~~~-~~~Divi~~tp~~~~~~~~~ 189 (263)
T 2d5c_A 113 IPLKG-PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLR-AVPLEKA-REARLLVNATRVGLEDPSAS 189 (263)
T ss_dssp CCCCS-CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCE-ECCGGGG-GGCSEEEECSSTTTTCTTCC
T ss_pred CCCCC-eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccc-hhhHhhc-cCCCEEEEccCCCCCCCCCC
Confidence 46889 9999999999999999999999999999997532 2344455655 4578888 99999999999653 2223
Q ss_pred cccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCc
Q 027408 109 MFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHI 147 (223)
Q Consensus 109 ~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i 147 (223)
.+. .+.++++++++|++.+.. +. .+.+.+++..+
T Consensus 190 ~l~---~~~l~~g~~viD~~~~p~-~t-~l~~~a~~~g~ 223 (263)
T 2d5c_A 190 PLP---AELFPEEGAAVDLVYRPL-WT-RFLREAKAKGL 223 (263)
T ss_dssp SSC---GGGSCSSSEEEESCCSSS-SC-HHHHHHHHTTC
T ss_pred CCC---HHHcCCCCEEEEeecCCc-cc-HHHHHHHHCcC
Confidence 343 467899999999998744 33 47776666443
No 96
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=99.16 E-value=1.7e-10 Score=99.44 Aligned_cols=108 Identities=12% Similarity=0.192 Sum_probs=81.5
Q ss_pred CCCCCEEEEEcccHHHHHHHHHHccCC----CeEEEEcCCCC--ChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhh
Q 027408 33 DLEGKTVGTVGCGRIGKLLLQRLKPFN----CNLLYHDRVKM--DPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKT 106 (223)
Q Consensus 33 ~l~g~~igIiG~G~iG~~iA~~l~~~G----~~V~~~d~~~~--~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t 106 (223)
....++|+|||+|.||..+|..|...| .+|.+|||++. ..+...+.|+....+..++++++|+|++|+| ....
T Consensus 19 ~~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~~~~~e~~~~aDvVilav~-~~~~ 97 (322)
T 2izz_A 19 YFQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVK-PHII 97 (322)
T ss_dssp ---CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHTCEEESCHHHHHHHCSEEEECSC-GGGH
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcCCEEeCChHHHhccCCEEEEEeC-HHHH
Confidence 345578999999999999999999888 78999999764 3334456688777788899999999999999 3344
Q ss_pred hhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHh
Q 027408 107 RGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSS 144 (223)
Q Consensus 107 ~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~ 144 (223)
..++ .+....++++++||+++.|- ..+.+.+.+.+
T Consensus 98 ~~vl-~~l~~~l~~~~ivvs~s~gi--~~~~l~~~l~~ 132 (322)
T 2izz_A 98 PFIL-DEIGADIEDRHIVVSCAAGV--TISSIEKKLSA 132 (322)
T ss_dssp HHHH-HHHGGGCCTTCEEEECCTTC--CHHHHHHHHHT
T ss_pred HHHH-HHHHhhcCCCCEEEEeCCCC--CHHHHHHHHhh
Confidence 4433 45566788899999998764 34566666764
No 97
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=99.16 E-value=4e-11 Score=99.36 Aligned_cols=104 Identities=17% Similarity=0.314 Sum_probs=78.0
Q ss_pred CEEEEEcccHHHHHHHHHHccCCC----eEEEEcCCCCChhHH-HhhCCeecCCHHhhcccCCEEEEcCCCChhhhhccc
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNC----NLLYHDRVKMDPQLE-KETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 111 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~----~V~~~d~~~~~~~~~-~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~ 111 (223)
++|+|||+|.||..+++.|...|+ +|.+|||++...+.. +.+|+....+++++++++|+|++++|.. ....++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVilav~~~-~~~~v~- 80 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTTTTDNNEVAKNADILILSIKPD-LYASII- 80 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEECSCHHHHHHHCSEEEECSCTT-THHHHC-
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEEeCChHHHHHhCCEEEEEeCHH-HHHHHH-
Confidence 689999999999999999999998 999999976433333 3468887889999999999999999732 233333
Q ss_pred HHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHh
Q 027408 112 KDRIAKMKKGVLIVNNARGAIMDTQAVVDACSS 144 (223)
Q Consensus 112 ~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~ 144 (223)
++....+++++++|++..|- ..+.+.+.+..
T Consensus 81 ~~l~~~l~~~~~vvs~~~gi--~~~~l~~~~~~ 111 (247)
T 3gt0_A 81 NEIKEIIKNDAIIVTIAAGK--SIESTENAFNK 111 (247)
T ss_dssp ---CCSSCTTCEEEECSCCS--CHHHHHHHHCS
T ss_pred HHHHhhcCCCCEEEEecCCC--CHHHHHHHhCC
Confidence 55666788899999776654 35566666654
No 98
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=99.15 E-value=9.8e-11 Score=89.12 Aligned_cols=91 Identities=12% Similarity=0.214 Sum_probs=71.4
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCCh-hHHHhhCCe--ecCCHHhhcccCCEEEEcCCCChhhhhccc
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDP-QLEKETGAK--FEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 111 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~-~~~~~~g~~--~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~ 111 (223)
.+++|+|||+|.||+.+++.|...|++|.+++|++... +.++.++.. ...+++++++++|+|+.++|.. ..++.
T Consensus 20 ~~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Divi~at~~~---~~~~~ 96 (144)
T 3oj0_A 20 GGNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYVLINDIDSLIKNNDVIITATSSK---TPIVE 96 (144)
T ss_dssp CCCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEEECSCHHHHHHTCSEEEECSCCS---SCSBC
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceEeecCHHHHhcCCCEEEEeCCCC---CcEee
Confidence 48999999999999999999999999999999976332 334555653 4578899999999999999954 23343
Q ss_pred HHHHhcCCCCcEEEEcCCCC
Q 027408 112 KDRIAKMKKGVLIVNNARGA 131 (223)
Q Consensus 112 ~~~~~~mk~ga~ivn~srg~ 131 (223)
. +.++++.+++|++...
T Consensus 97 ~---~~l~~g~~vid~~~p~ 113 (144)
T 3oj0_A 97 E---RSLMPGKLFIDLGNPP 113 (144)
T ss_dssp G---GGCCTTCEEEECCSSC
T ss_pred H---HHcCCCCEEEEccCCc
Confidence 3 5678899999987643
No 99
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=99.15 E-value=1.1e-10 Score=98.91 Aligned_cols=105 Identities=13% Similarity=0.142 Sum_probs=80.6
Q ss_pred CCEEEEEcccHHHHHHHHHHccCCC---eEEEEcCCCCChhHH-HhhCCeecCCHHhhcccCCEEEEcCCCChhhhhccc
Q 027408 36 GKTVGTVGCGRIGKLLLQRLKPFNC---NLLYHDRVKMDPQLE-KETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 111 (223)
Q Consensus 36 g~~igIiG~G~iG~~iA~~l~~~G~---~V~~~d~~~~~~~~~-~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~ 111 (223)
.++|||||+|+||..+++.+...|+ +|.+|||++...+.. +.+|+....+..++++++|+|++++|. +...-+-
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav~p--~~~~~vl 80 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVKP--HQIKMVC 80 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECSCG--GGHHHHH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEeCH--HHHHHHH
Confidence 4789999999999999999998898 899999987443333 335887777899999999999999983 3222223
Q ss_pred HHHHhc-CCCCcEEEEcCCCCccCHHHHHHHHHh
Q 027408 112 KDRIAK-MKKGVLIVNNARGAIMDTQAVVDACSS 144 (223)
Q Consensus 112 ~~~~~~-mk~ga~ivn~srg~~vd~~al~~~L~~ 144 (223)
++.... ++++++||+++.|- ..+.|.+.+..
T Consensus 81 ~~l~~~~l~~~~iiiS~~agi--~~~~l~~~l~~ 112 (280)
T 3tri_A 81 EELKDILSETKILVISLAVGV--TTPLIEKWLGK 112 (280)
T ss_dssp HHHHHHHHTTTCEEEECCTTC--CHHHHHHHHTC
T ss_pred HHHHhhccCCCeEEEEecCCC--CHHHHHHHcCC
Confidence 455555 78888999887764 45677777765
No 100
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=99.14 E-value=9.1e-11 Score=99.01 Aligned_cols=95 Identities=16% Similarity=0.263 Sum_probs=73.9
Q ss_pred cCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCC-hhHHHhhCCeecCCHHhhcccCCEEEEcCCCChh--hhh
Q 027408 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMD-PQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEK--TRG 108 (223)
Q Consensus 32 ~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~--t~~ 108 (223)
.++.|++|+|||+|.+|+++|+.|...|++|.++||+... .+.++.+++...++++++++++|+|++++|.... +..
T Consensus 125 ~~~~~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDiVi~atp~~~~~~~~~ 204 (275)
T 2hk9_A 125 PEVKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEVVNSPEEVIDKVQVIVNTTSVGLKDEDPE 204 (275)
T ss_dssp TTGGGSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEEECSCGGGTGGGCSEEEECSSTTSSTTCCC
T ss_pred CCcCCCEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCeeehhHHhhhcCCCEEEEeCCCCCCCCCCC
Confidence 4688999999999999999999999999999999997522 2233344555555788899999999999996542 112
Q ss_pred cccHHHHhcCCCCcEEEEcCC
Q 027408 109 MFDKDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 109 ~i~~~~~~~mk~ga~ivn~sr 129 (223)
.++ .+.++++++++|++.
T Consensus 205 ~i~---~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 205 IFN---YDLIKKDHVVVDIIY 222 (275)
T ss_dssp SSC---GGGCCTTSEEEESSS
T ss_pred CCC---HHHcCCCCEEEEcCC
Confidence 332 456899999999988
No 101
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=99.11 E-value=1.6e-10 Score=101.33 Aligned_cols=108 Identities=22% Similarity=0.276 Sum_probs=84.5
Q ss_pred CCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCCh-hHHHhhCCeecCCHHhhcc-cCCEEEEcCCCChhhhhcc
Q 027408 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDP-QLEKETGAKFEEDLDTMLP-KCDIVVVNTPLTEKTRGMF 110 (223)
Q Consensus 33 ~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~-~~~~~~g~~~~~~l~e~l~-~aDvVv~~~p~~~~t~~~i 110 (223)
+|.|++|+|+|+|+||+.+|+.|..+|++|+++|++.... +.+++++...+ +.++++. +||+++.|. +.+++
T Consensus 170 ~L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~~v-~~~~ll~~~~DIvip~a-----~~~~I 243 (364)
T 1leh_A 170 SLEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAV-APNAIYGVTCDIFAPCA-----LGAVL 243 (364)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEEC-CGGGTTTCCCSEEEECS-----CSCCB
T ss_pred CCCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEE-ChHHHhccCCcEeeccc-----hHHHh
Confidence 6999999999999999999999999999999999865222 23445576655 6677776 899999875 35678
Q ss_pred cHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCcc
Q 027408 111 DKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (223)
Q Consensus 111 ~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~ 148 (223)
+.+.++.++ ..+|++.+++++.+++ ..+.|+++.+.
T Consensus 244 ~~~~~~~lg-~~iV~e~An~p~t~~e-a~~~L~~~Gi~ 279 (364)
T 1leh_A 244 NDFTIPQLK-AKVIAGSADNQLKDPR-HGKYLHELGIV 279 (364)
T ss_dssp STTHHHHCC-CSEECCSCSCCBSSHH-HHHHHHHHTCE
T ss_pred CHHHHHhCC-CcEEEeCCCCCcccHH-HHHHHHhCCCE
Confidence 877888884 5688999999988755 55667766654
No 102
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=99.11 E-value=1.1e-10 Score=98.57 Aligned_cols=92 Identities=18% Similarity=0.299 Sum_probs=72.3
Q ss_pred CEEEEEcc-cHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhcccHHHH
Q 027408 37 KTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRI 115 (223)
Q Consensus 37 ~~igIiG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~ 115 (223)
++|+|||+ |.||+.+|+.|...|++|.+|||++...+...+.|+.. .++.++++++|+|++++|... +..++ ++..
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~-~~~~~~~~~aDvVi~av~~~~-~~~v~-~~l~ 88 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPL-TDGDGWIDEADVVVLALPDNI-IEKVA-EDIV 88 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCC-CCSSGGGGTCSEEEECSCHHH-HHHHH-HHHG
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCc-CCHHHHhcCCCEEEEcCCchH-HHHHH-HHHH
Confidence 68999999 99999999999999999999999754333344456544 367788899999999999433 33333 5566
Q ss_pred hcCCCCcEEEEcCCCC
Q 027408 116 AKMKKGVLIVNNARGA 131 (223)
Q Consensus 116 ~~mk~ga~ivn~srg~ 131 (223)
..++++++||+++.|.
T Consensus 89 ~~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 89 PRVRPGTIVLILDAAA 104 (286)
T ss_dssp GGSCTTCEEEESCSHH
T ss_pred HhCCCCCEEEECCCCc
Confidence 7788999999988876
No 103
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=99.11 E-value=1.6e-09 Score=97.56 Aligned_cols=140 Identities=16% Similarity=0.134 Sum_probs=95.1
Q ss_pred CCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCCh--------hHHHhhC-------------CeecCCHHhhcccCC
Q 027408 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDP--------QLEKETG-------------AKFEEDLDTMLPKCD 94 (223)
Q Consensus 36 g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~--------~~~~~~g-------------~~~~~~l~e~l~~aD 94 (223)
=++|+|||+|.||..+|..+...|++|++||+++... +...+.| +...++++ .+++||
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~-al~~aD 132 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFH-KLSNCD 132 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGG-GCTTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHH-HHccCC
Confidence 3789999999999999999999999999999975310 0111112 23456775 688999
Q ss_pred EEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCCCCCCCCCCccCCCCeEE
Q 027408 95 IVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAM 174 (223)
Q Consensus 95 vVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~ep~~~~~~l~~~~nv~~ 174 (223)
+||.++|.+.+.+..+-++..+.++++++|++.+.+ +....+.+.+.. .-+..++..|. |.+ ..+-+.+
T Consensus 133 lVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSs--l~i~~ia~~~~~-p~r~iG~Hffn--Pv~------~m~LvEI 201 (460)
T 3k6j_A 133 LIVESVIEDMKLKKELFANLENICKSTCIFGTNTSS--LDLNEISSVLRD-PSNLVGIHFFN--PAN------VIRLVEI 201 (460)
T ss_dssp EEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSS--SCHHHHHTTSSS-GGGEEEEECCS--STT------TCCEEEE
T ss_pred EEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCC--hhHHHHHHhccC-CcceEEEEecc--hhh------hCCEEEE
Confidence 999999988777666667788889999999755444 445566655543 34567777655 432 2334566
Q ss_pred ccCCCCCcHHHHHH
Q 027408 175 TPHVSGTTIDAQLR 188 (223)
Q Consensus 175 tPH~a~~t~~~~~~ 188 (223)
+|+- ..+.++.++
T Consensus 202 v~g~-~Ts~e~~~~ 214 (460)
T 3k6j_A 202 IYGS-HTSSQAIAT 214 (460)
T ss_dssp ECCS-SCCHHHHHH
T ss_pred EeCC-CCCHHHHHH
Confidence 6642 234554443
No 104
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=99.11 E-value=4.1e-10 Score=93.59 Aligned_cols=101 Identities=12% Similarity=0.246 Sum_probs=77.7
Q ss_pred CEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChh-HHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhcccHHHH
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQ-LEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRI 115 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~-~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~ 115 (223)
++|+|||+|.||+.+++.+...|.+|.+||+++...+ ..+.+|+....+++++++++|+|++++| .... .+.+
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~Vi~~v~-~~~~-----~~v~ 77 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIK-PQLF-----ETVL 77 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSC-GGGH-----HHHH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEeeCCHHHHHhcCCEEEEEeC-cHhH-----HHHH
Confidence 5899999999999999999999999999999753332 2334577767789999999999999999 2222 4556
Q ss_pred hcCCCCcEEEEcCCCCccCHHHHHHHHHhC
Q 027408 116 AKMKKGVLIVNNARGAIMDTQAVVDACSSG 145 (223)
Q Consensus 116 ~~mk~ga~ivn~srg~~vd~~al~~~L~~g 145 (223)
..++++.++|+.+.|-- .+.+.+.+..+
T Consensus 78 ~~l~~~~~vv~~~~~~~--~~~l~~~~~~~ 105 (259)
T 2ahr_A 78 KPLHFKQPIISMAAGIS--LQRLATFVGQD 105 (259)
T ss_dssp TTSCCCSCEEECCTTCC--HHHHHHHHCTT
T ss_pred HHhccCCEEEEeCCCCC--HHHHHHhcCCC
Confidence 66778999999976643 45566666644
No 105
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=99.08 E-value=1.3e-10 Score=94.50 Aligned_cols=95 Identities=15% Similarity=0.194 Sum_probs=70.5
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhcccHHH
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDR 114 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~ 114 (223)
.+++|+|||+|.||+.+|+.+...|++|.++||++...+.....++... +++++++++|+|++++|. .....++.
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~-~~~~~~~~~DvVi~av~~-~~~~~v~~--- 101 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVT-FQEEAVSSPEVIFVAVFR-EHYSSLCS--- 101 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTSEEE-EHHHHTTSCSEEEECSCG-GGSGGGGG---
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcee-cHHHHHhCCCEEEECCCh-HHHHHHHH---
Confidence 4578999999999999999999999999999997532232333355544 788999999999999994 33444442
Q ss_pred HhcCCCCcEEEEcCCCCccC
Q 027408 115 IAKMKKGVLIVNNARGAIMD 134 (223)
Q Consensus 115 ~~~mk~ga~ivn~srg~~vd 134 (223)
++.+.+++++|++++|...+
T Consensus 102 l~~~~~~~~vv~~s~g~~~~ 121 (215)
T 2vns_A 102 LSDQLAGKILVDVSNPTEQE 121 (215)
T ss_dssp GHHHHTTCEEEECCCCCHHH
T ss_pred HHHhcCCCEEEEeCCCcccc
Confidence 33333799999999987543
No 106
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=99.07 E-value=3.7e-10 Score=91.51 Aligned_cols=80 Identities=15% Similarity=0.254 Sum_probs=62.0
Q ss_pred cCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhccc
Q 027408 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 111 (223)
Q Consensus 32 ~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~ 111 (223)
.++..++|+|||+|.||..+|+.|...|.+|.+|||++. .++++|+|++++| .+.+..++
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~------------------~~~~aD~vi~av~-~~~~~~v~- 74 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ------------------ATTLGEIVIMAVP-YPALAALA- 74 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC------------------CSSCCSEEEECSC-HHHHHHHH-
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH------------------HhccCCEEEEcCC-cHHHHHHH-
Confidence 468899999999999999999999999999999998652 4678999999999 44454444
Q ss_pred HHHHhcCCCCcEEEEcCCCCc
Q 027408 112 KDRIAKMKKGVLIVNNARGAI 132 (223)
Q Consensus 112 ~~~~~~mk~ga~ivn~srg~~ 132 (223)
++..+.++ ++++|++++|--
T Consensus 75 ~~l~~~~~-~~~vi~~~~g~~ 94 (209)
T 2raf_A 75 KQYATQLK-GKIVVDITNPLN 94 (209)
T ss_dssp HHTHHHHT-TSEEEECCCCBC
T ss_pred HHHHHhcC-CCEEEEECCCCC
Confidence 34445677 999999999765
No 107
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=99.07 E-value=3.7e-10 Score=101.06 Aligned_cols=116 Identities=12% Similarity=0.122 Sum_probs=85.1
Q ss_pred cccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHh------------------hCCeecCCHHhhcc
Q 027408 30 RAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE------------------TGAKFEEDLDTMLP 91 (223)
Q Consensus 30 ~~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~------------------~g~~~~~~l~e~l~ 91 (223)
.+++..-++|+|||+|.||..+|..|.. |++|++||+++...+.... .++...+++++.++
T Consensus 30 ~~r~~~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~ 108 (432)
T 3pid_A 30 MGRGSEFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYR 108 (432)
T ss_dssp -----CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHT
T ss_pred cccccCCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHh
Confidence 3567777899999999999999999988 9999999997533222221 13455678899999
Q ss_pred cCCEEEEcCCCChhh-------hhc--ccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCc
Q 027408 92 KCDIVVVNTPLTEKT-------RGM--FDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHI 147 (223)
Q Consensus 92 ~aDvVv~~~p~~~~t-------~~~--i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i 147 (223)
+||+|++|+|..... ..+ ..+...+ +++++++|+.|.-++-..+.+.+.+.+..+
T Consensus 109 ~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~~v 172 (432)
T 3pid_A 109 NADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVGFTRDIKERLGIDNV 172 (432)
T ss_dssp TCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCCCE
T ss_pred CCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhccE
Confidence 999999999954211 111 1245666 899999999999888888889888876544
No 108
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=99.04 E-value=6.1e-10 Score=94.85 Aligned_cols=116 Identities=14% Similarity=0.090 Sum_probs=80.4
Q ss_pred CEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHH-----------hh------------------CCeecCCHH
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEK-----------ET------------------GAKFEEDLD 87 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~-----------~~------------------g~~~~~~l~ 87 (223)
++|+|||+|.||..+|..+...|++|++||+++...+... +. ++...++++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~ 95 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDAA 95 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEecCHH
Confidence 6899999999999999999999999999999753222110 11 233456888
Q ss_pred hhcccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCC
Q 027408 88 TMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVW 155 (223)
Q Consensus 88 e~l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~ 155 (223)
+.+++||+|++++|.+.+.+..+.++..+.++++++|++.+.+- ....+.+.+.. .-...+...+
T Consensus 96 ~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i--~~~~l~~~~~~-~~~~~g~h~~ 160 (302)
T 1f0y_A 96 SVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSL--QITSIANATTR-QDRFAGLHFF 160 (302)
T ss_dssp HHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSS--CHHHHHTTSSC-GGGEEEEEEC
T ss_pred HhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCC--CHHHHHHhcCC-cccEEEEecC
Confidence 88999999999999766554444456667788899988665553 34455554432 1233455543
No 109
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=99.02 E-value=6.1e-10 Score=92.59 Aligned_cols=100 Identities=14% Similarity=0.189 Sum_probs=73.8
Q ss_pred CEEEEEcccHHHHHHHHHHccCC-CeEEEEcCCCCChhHH-HhhCCeecCCHHhhcccCCEEEEcCCCChhhhhcccHHH
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFN-CNLLYHDRVKMDPQLE-KETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDR 114 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G-~~V~~~d~~~~~~~~~-~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~ 114 (223)
++|+|||+|.||..+|..|...| .+|.+|||++...+.. +.+|+....++++++ ++|+|++++| .... ++.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~~~~~~~~~-~~D~vi~~v~-~~~~-----~~v 73 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPELH-SDDVLILAVK-PQDM-----EAA 73 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCCCC-TTSEEEECSC-HHHH-----HHH
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEEeCCHHHHh-cCCEEEEEeC-chhH-----HHH
Confidence 48999999999999999998889 9999999975333333 334777667788888 9999999999 3333 334
Q ss_pred HhcCCC-CcEEEEcCCCCccCHHHHHHHHHhC
Q 027408 115 IAKMKK-GVLIVNNARGAIMDTQAVVDACSSG 145 (223)
Q Consensus 115 ~~~mk~-ga~ivn~srg~~vd~~al~~~L~~g 145 (223)
+..+++ ++++|+++.|-- .+.+.+.+..+
T Consensus 74 ~~~l~~~~~ivv~~~~g~~--~~~l~~~~~~~ 103 (263)
T 1yqg_A 74 CKNIRTNGALVLSVAAGLS--VGTLSRYLGGT 103 (263)
T ss_dssp HTTCCCTTCEEEECCTTCC--HHHHHHHTTSC
T ss_pred HHHhccCCCEEEEecCCCC--HHHHHHHcCCC
Confidence 444432 889999866543 36677776653
No 110
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=99.01 E-value=2.4e-09 Score=96.27 Aligned_cols=109 Identities=14% Similarity=0.185 Sum_probs=83.1
Q ss_pred CCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHh--------------------hCCeecCCHHhhcccCCE
Q 027408 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE--------------------TGAKFEEDLDTMLPKCDI 95 (223)
Q Consensus 36 g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~--------------------~g~~~~~~l~e~l~~aDv 95 (223)
.-+|+|||+|.||..+|..|...|++|++||+++...+.... .++...+++.+.+++||+
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aDv 87 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDADA 87 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCSE
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCCE
Confidence 347999999999999999999999999999998755443322 123455789899999999
Q ss_pred EEEcCCCChh----------hhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhC
Q 027408 96 VVVNTPLTEK----------TRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSG 145 (223)
Q Consensus 96 Vv~~~p~~~~----------t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g 145 (223)
|++|+|.... .+.. .+...+.+++++++|+.|.-++-..+.+.+.+.+.
T Consensus 88 vii~Vptp~~~~~~~~Dl~~v~~v-~~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e~ 146 (446)
T 4a7p_A 88 VFIAVGTPSRRGDGHADLSYVFAA-AREIAENLTKPSVIVTKSTVPVGTGDEVERIIAEV 146 (446)
T ss_dssp EEECCCCCBCTTTCCBCTHHHHHH-HHHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHHH
T ss_pred EEEEcCCCCccccCCccHHHHHHH-HHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHh
Confidence 9999874321 2222 25677889999999999976666667777777653
No 111
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=99.01 E-value=1.2e-09 Score=98.29 Aligned_cols=107 Identities=14% Similarity=0.210 Sum_probs=80.6
Q ss_pred CEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHh--------------------hCCeecCCHHhhcccCCEE
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE--------------------TGAKFEEDLDTMLPKCDIV 96 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~--------------------~g~~~~~~l~e~l~~aDvV 96 (223)
++|+|||+|.||..+|..|...|++|++||+++...+...+ .++...+++++++++||+|
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aDvV 82 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEADII 82 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCCEE
Confidence 68999999999999999999999999999997532222211 1234557889999999999
Q ss_pred EEcCCCCh---------hhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHh
Q 027408 97 VVNTPLTE---------KTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSS 144 (223)
Q Consensus 97 v~~~p~~~---------~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~ 144 (223)
++|+|... ..... -++..+.+++++++|+.|.-.+-..+.+.+.+.+
T Consensus 83 iiaVptp~~~~~~~dl~~v~~v-~~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~ 138 (450)
T 3gg2_A 83 FIAVGTPAGEDGSADMSYVLDA-ARSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQE 138 (450)
T ss_dssp EECCCCCBCTTSSBCCHHHHHH-HHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEcCCCcccCCCcChHHHHHH-HHHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHH
Confidence 99998543 22222 3567778999999999997665556666666655
No 112
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=99.00 E-value=6.3e-10 Score=99.69 Aligned_cols=107 Identities=12% Similarity=0.114 Sum_probs=79.9
Q ss_pred CEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHh-------------------hC-CeecCCHHhhcccCCEE
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE-------------------TG-AKFEEDLDTMLPKCDIV 96 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~-------------------~g-~~~~~~l~e~l~~aDvV 96 (223)
++|+|||+|.||..+|..|...|++|+++|+++...+.... .+ +...+++++.+++||+|
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDvv 80 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVS 80 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCEE
Confidence 48999999999999999999999999999997533222222 22 44556888888999999
Q ss_pred EEcCCCChh---------hhhcccHHHHhcCCC---CcEEEEcCCCCccC-HHHHHHHHHh
Q 027408 97 VVNTPLTEK---------TRGMFDKDRIAKMKK---GVLIVNNARGAIMD-TQAVVDACSS 144 (223)
Q Consensus 97 v~~~p~~~~---------t~~~i~~~~~~~mk~---ga~ivn~srg~~vd-~~al~~~L~~ 144 (223)
++|+|.... ....+ ++..+.+++ +++||+.|...+-. .+.+.+.+.+
T Consensus 81 iiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~ 140 (436)
T 1mv8_A 81 FICVGTPSKKNGDLDLGYIETVC-REIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIED 140 (436)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHH-HHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHH
T ss_pred EEEcCCCcccCCCcchHHHHHHH-HHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHH
Confidence 999985443 33322 455667888 99999998766655 5667777766
No 113
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=99.00 E-value=7.8e-10 Score=96.74 Aligned_cols=99 Identities=13% Similarity=0.063 Sum_probs=74.5
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhC--------------CeecCCHHhhcccCCEEEEcC
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETG--------------AKFEEDLDTMLPKCDIVVVNT 100 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g--------------~~~~~~l~e~l~~aDvVv~~~ 100 (223)
..++|+|||.|.||..+|..|...|.+|.+|+|++...+...+.+ +...+++++.++++|+|++++
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVilaV 107 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVV 107 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEECC
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEECC
Confidence 347899999999999999999999999999999753323222222 234468889999999999999
Q ss_pred CCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCH
Q 027408 101 PLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDT 135 (223)
Q Consensus 101 p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~ 135 (223)
|.. ....+ -++....+++++++|+++.|-..+.
T Consensus 108 p~~-~~~~v-l~~i~~~l~~~~ivvs~~kGi~~~t 140 (356)
T 3k96_A 108 PSF-AFHEV-ITRMKPLIDAKTRIAWGTKGLAKGS 140 (356)
T ss_dssp CHH-HHHHH-HHHHGGGCCTTCEEEECCCSCBTTT
T ss_pred CHH-HHHHH-HHHHHHhcCCCCEEEEEeCCCCcCc
Confidence 932 22322 3566677889999999998766553
No 114
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.98 E-value=7.3e-10 Score=95.16 Aligned_cols=111 Identities=12% Similarity=0.114 Sum_probs=79.8
Q ss_pred CCCCEEEEEcccHHHHHHHHHHcc-CCC-eEEEEcCCCCCh-hHHHhhC--CeecCCHHhhcccCCEEEEcCCCChhhhh
Q 027408 34 LEGKTVGTVGCGRIGKLLLQRLKP-FNC-NLLYHDRVKMDP-QLEKETG--AKFEEDLDTMLPKCDIVVVNTPLTEKTRG 108 (223)
Q Consensus 34 l~g~~igIiG~G~iG~~iA~~l~~-~G~-~V~~~d~~~~~~-~~~~~~g--~~~~~~l~e~l~~aDvVv~~~p~~~~t~~ 108 (223)
...++|||||+|.||+.+++.+.. +|. +|.+|||++... +..+.++ +....+++++++++|+|++++|.. ..
T Consensus 133 ~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~e~v~~aDiVi~atp~~---~~ 209 (312)
T 2i99_A 133 PSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRVCSSVQEAVAGADVIITVTLAT---EP 209 (312)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSCCEECSSHHHHHTTCSEEEECCCCS---SC
T ss_pred CCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCCeEEeCCHHHHHhcCCEEEEEeCCC---Cc
Confidence 467899999999999999999865 487 799999976332 2334445 666789999999999999999943 44
Q ss_pred cccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEee
Q 027408 109 MFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGD 153 (223)
Q Consensus 109 ~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lD 153 (223)
++.. +.+++|++|++++....-. ..+.+.+.+... ..+|
T Consensus 210 v~~~---~~l~~g~~vi~~g~~~p~~-~el~~~~~~~g~--~~vD 248 (312)
T 2i99_A 210 ILFG---EWVKPGAHINAVGASRPDW-RELDDELMKEAV--LYVD 248 (312)
T ss_dssp CBCG---GGSCTTCEEEECCCCSTTC-CSBCHHHHHHSE--EEES
T ss_pred ccCH---HHcCCCcEEEeCCCCCCCc-eeccHHHHhcCE--EEEC
Confidence 5544 5789999999997665532 333333333222 3566
No 115
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=98.97 E-value=3.1e-09 Score=96.43 Aligned_cols=116 Identities=14% Similarity=0.111 Sum_probs=82.6
Q ss_pred CCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHh-----------hC-------------CeecCCHHhhcc
Q 027408 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE-----------TG-------------AKFEEDLDTMLP 91 (223)
Q Consensus 36 g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~-----------~g-------------~~~~~~l~e~l~ 91 (223)
-++|||||+|.||..+|..+...|++|++||+++...+...+ .| +...++++ .++
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~~~ 83 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIH-ALA 83 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGG-GGG
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHH-Hhc
Confidence 358999999999999999999999999999997633322211 12 23345664 588
Q ss_pred cCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEE-EcCCCCccCHHHHHHHHHhCCccEEEeeCCC
Q 027408 92 KCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIV-NNARGAIMDTQAVVDACSSGHIAGYSGDVWN 156 (223)
Q Consensus 92 ~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~iv-n~srg~~vd~~al~~~L~~g~i~~a~lDv~~ 156 (223)
+||+|+.++|.+.+.+..+-.+..+.++++++|+ |+|.- +...+.+.+.. .-...++..|.
T Consensus 84 ~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti---~i~~ia~~~~~-p~~~ig~hf~~ 145 (483)
T 3mog_A 84 AADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSI---SITAIAAEIKN-PERVAGLHFFN 145 (483)
T ss_dssp GCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSS---CHHHHTTTSSS-GGGEEEEEECS
T ss_pred CCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCC---CHHHHHHHccC-ccceEEeeecC
Confidence 9999999999877666556677788899999995 55543 34555555532 34556777554
No 116
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=98.95 E-value=2.2e-09 Score=89.13 Aligned_cols=99 Identities=18% Similarity=0.340 Sum_probs=72.4
Q ss_pred CCEEEEEcccHHHHHHHHHHccCC----CeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhccc
Q 027408 36 GKTVGTVGCGRIGKLLLQRLKPFN----CNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 111 (223)
Q Consensus 36 g~~igIiG~G~iG~~iA~~l~~~G----~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~ 111 (223)
.++|+|||+|.||+.+|+.|...| .+|.+|||++.. .|+....+++++++++|+|++++|. .....++
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~------~g~~~~~~~~~~~~~~D~vi~~v~~-~~~~~v~- 75 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN------TTLNYMSSNEELARHCDIIVCAVKP-DIAGSVL- 75 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS------SSSEECSCHHHHHHHCSEEEECSCT-TTHHHHH-
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc------CceEEeCCHHHHHhcCCEEEEEeCH-HHHHHHH-
Confidence 468999999999999999998888 689999997643 4677667888999999999999993 3333333
Q ss_pred HHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhC
Q 027408 112 KDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSG 145 (223)
Q Consensus 112 ~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g 145 (223)
.+....+ ++..+|....| ++.+.+.+.+..+
T Consensus 76 ~~l~~~l-~~~~vv~~~~g--i~~~~l~~~~~~~ 106 (262)
T 2rcy_A 76 NNIKPYL-SSKLLISICGG--LNIGKLEEMVGSE 106 (262)
T ss_dssp HHSGGGC-TTCEEEECCSS--CCHHHHHHHHCTT
T ss_pred HHHHHhc-CCCEEEEECCC--CCHHHHHHHhCCC
Confidence 3444555 45666666554 3445666666553
No 117
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=98.94 E-value=3.7e-09 Score=91.46 Aligned_cols=105 Identities=16% Similarity=0.191 Sum_probs=76.2
Q ss_pred CEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhh-CC--------------eecCCHHhhcccCCEEEEcCC
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKET-GA--------------KFEEDLDTMLPKCDIVVVNTP 101 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~-g~--------------~~~~~l~e~l~~aDvVv~~~p 101 (223)
++|+|||+|.||..+|..|...|++|.++++++...+...+. +. ...++++++++++|+|++++|
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 84 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVVP 84 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEeCC
Confidence 689999999999999999999999999999975333323222 21 234678888899999999999
Q ss_pred CChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHh
Q 027408 102 LTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSS 144 (223)
Q Consensus 102 ~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~ 144 (223)
.... ..++ ++....+++++++|+. .|.......+.+.+.+
T Consensus 85 ~~~~-~~~~-~~l~~~l~~~~~vv~~-~~~~~~~~~~~~~l~~ 124 (359)
T 1bg6_A 85 AIHH-ASIA-ANIASYISEGQLIILN-PGATGGALEFRKILRE 124 (359)
T ss_dssp GGGH-HHHH-HHHGGGCCTTCEEEES-SCCSSHHHHHHHHHHH
T ss_pred chHH-HHHH-HHHHHhCCCCCEEEEc-CCCchHHHHHHHHHHh
Confidence 5443 3333 5666778999999998 5523344445565655
No 118
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=98.93 E-value=1.8e-09 Score=92.64 Aligned_cols=105 Identities=12% Similarity=0.047 Sum_probs=74.1
Q ss_pred CEEEEEcccHHHHHHHHHHccCCCeEEEEcC--CCCChhHHHhhCC-----------eecC--CHHhhcccCCEEEEcCC
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDR--VKMDPQLEKETGA-----------KFEE--DLDTMLPKCDIVVVNTP 101 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~--~~~~~~~~~~~g~-----------~~~~--~l~e~l~~aDvVv~~~p 101 (223)
++|+|||+|.||..+|..|...|++|.+|+| ++...+...+.+. ...+ ++++.++++|+|++++|
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 80 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVS 80 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcCC
Confidence 4899999999999999999988999999998 6432333333332 2334 67788899999999999
Q ss_pred CChhhhhcccHHHHhcCCCCcEEEEcCCCC---c-cCHHHHHHHHHh
Q 027408 102 LTEKTRGMFDKDRIAKMKKGVLIVNNARGA---I-MDTQAVVDACSS 144 (223)
Q Consensus 102 ~~~~t~~~i~~~~~~~mk~ga~ivn~srg~---~-vd~~al~~~L~~ 144 (223)
.. .+..++ ++... +++++++|+++.|- - -..+.+.+.+.+
T Consensus 81 ~~-~~~~v~-~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~ 124 (335)
T 1txg_A 81 TD-GVLPVM-SRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRL 124 (335)
T ss_dssp GG-GHHHHH-HHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTT
T ss_pred hH-HHHHHH-HHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHH
Confidence 43 333333 45556 88899999998775 1 122445566654
No 119
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=98.92 E-value=3.1e-09 Score=96.35 Aligned_cols=109 Identities=12% Similarity=0.163 Sum_probs=77.2
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhh--------------------CCeecCCHHhhcccCC
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKET--------------------GAKFEEDLDTMLPKCD 94 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~--------------------g~~~~~~l~e~l~~aD 94 (223)
-.++|+|||+|.||..+|..|...|++|++||+++...+...+. .+...+++++.+++||
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~aD 86 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGD 86 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHCS
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcCC
Confidence 45799999999999999999999999999999975322222211 1344567778889999
Q ss_pred EEEEcCCCC---------hhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHh
Q 027408 95 IVVVNTPLT---------EKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSS 144 (223)
Q Consensus 95 vVv~~~p~~---------~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~ 144 (223)
+|++|+|.. ...... -++..+.++++++||+.|.-.+-..+.+.+.+.+
T Consensus 87 vviiaVptp~~~~~~~dl~~v~~v-~~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~~ 144 (478)
T 2y0c_A 87 VQFIAVGTPPDEDGSADLQYVLAA-ARNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAE 144 (478)
T ss_dssp EEEECCCCCBCTTSSBCCHHHHHH-HHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEEEeCCCcccCCCccHHHHHHH-HHHHHHhcCCCCEEEEeCCcCCCchHHHHHHHHH
Confidence 999999842 222222 2556678999999999984334444445555543
No 120
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=98.91 E-value=1e-09 Score=89.48 Aligned_cols=90 Identities=18% Similarity=0.275 Sum_probs=66.4
Q ss_pred CCEEEEEcccHHHHHHHHHHccCCCeEEE-EcCCCCChh-HHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhcccHH
Q 027408 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLY-HDRVKMDPQ-LEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKD 113 (223)
Q Consensus 36 g~~igIiG~G~iG~~iA~~l~~~G~~V~~-~d~~~~~~~-~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~ 113 (223)
-++|+|||+|.||..+|+.|...|++|.+ +||++...+ ..+..+.....+..+.++++|+|++++|.. .. .+
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDvVilavp~~-~~-----~~ 96 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKAVELKDALQADVVILAVPYD-SI-----AD 96 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEECCHHHHTTSSEEEEESCGG-GH-----HH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCcccChHHHHhcCCEEEEeCChH-HH-----HH
Confidence 46899999999999999999999999998 999764333 344556654445566688999999999921 11 33
Q ss_pred HHhcC--CCCcEEEEcCCCC
Q 027408 114 RIAKM--KKGVLIVNNARGA 131 (223)
Q Consensus 114 ~~~~m--k~ga~ivn~srg~ 131 (223)
.+..+ .++.++|+++.|-
T Consensus 97 v~~~l~~~~~~ivi~~~~g~ 116 (220)
T 4huj_A 97 IVTQVSDWGGQIVVDASNAI 116 (220)
T ss_dssp HHTTCSCCTTCEEEECCCCB
T ss_pred HHHHhhccCCCEEEEcCCCC
Confidence 33333 3578999998764
No 121
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=98.91 E-value=2.3e-09 Score=86.25 Aligned_cols=116 Identities=19% Similarity=0.241 Sum_probs=79.9
Q ss_pred CEEEEEc-ccHHHHHHHHHHccCCCeEEEEcCCCCChhH-HHhhC-------CeecCCHHhhcccCCEEEEcCCCChhhh
Q 027408 37 KTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQL-EKETG-------AKFEEDLDTMLPKCDIVVVNTPLTEKTR 107 (223)
Q Consensus 37 ~~igIiG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~-~~~~g-------~~~~~~l~e~l~~aDvVv~~~p~~~~t~ 107 (223)
++|+|+| .|.||+.+++.|...|++|.+++|++...+. .+..+ +. ..+++++++++|+|++++|. ..+.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~Vi~~~~~-~~~~ 78 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASIT-GMKNEDAAEACDIAVLTIPW-EHAI 78 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEE-EEEHHHHHHHCSEEEECSCH-HHHH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCC-hhhHHHHHhcCCEEEEeCCh-hhHH
Confidence 4799999 9999999999999999999999997532222 22222 33 35788888999999999993 2233
Q ss_pred hcccHHHHhcCCCCcEEEEcCCCCccC------------HHHHHHHHHhCCccEEEeeCCCCCCC
Q 027408 108 GMFDKDRIAKMKKGVLIVNNARGAIMD------------TQAVVDACSSGHIAGYSGDVWNPQPA 160 (223)
Q Consensus 108 ~~i~~~~~~~mk~ga~ivn~srg~~vd------------~~al~~~L~~g~i~~a~lDv~~~ep~ 160 (223)
.++ ++..+.+ +++++++++.|--.+ .+.+.+.+... ..++++.+.|.
T Consensus 79 ~~~-~~l~~~~-~~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~~~----~~v~~~~~~~~ 137 (212)
T 1jay_A 79 DTA-RDLKNIL-REKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLESE----KVVSALHTIPA 137 (212)
T ss_dssp HHH-HHTHHHH-TTSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHTCS----CEEECCTTCCH
T ss_pred HHH-HHHHHHc-CCCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCCCC----eEEEEccchHH
Confidence 332 2333445 489999999876532 56677776532 35677766553
No 122
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=98.91 E-value=5.4e-09 Score=92.74 Aligned_cols=106 Identities=12% Similarity=0.127 Sum_probs=77.8
Q ss_pred CEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCC------------------eecCCHHhhcccCCEEEE
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA------------------KFEEDLDTMLPKCDIVVV 98 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~------------------~~~~~l~e~l~~aDvVv~ 98 (223)
++|+|||+|.||..+|..|.. |++|++||+++...+.....+. ...+++.+.++++|+|++
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~aDvvii 79 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELVII 79 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcCCCEEEE
Confidence 489999999999999999998 9999999997533332222221 334567788889999999
Q ss_pred cCCCCh----------hhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhC
Q 027408 99 NTPLTE----------KTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSG 145 (223)
Q Consensus 99 ~~p~~~----------~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g 145 (223)
|+|... .....+ +...+ ++++++||+.+.-++-..+.+.+.+.+.
T Consensus 80 avpt~~~~~~~~~dl~~v~~v~-~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~~ 134 (402)
T 1dlj_A 80 ATPTNYNSRINYFDTQHVETVI-KEVLS-VNSHATLIIKSTIPIGFITEMRQKFQTD 134 (402)
T ss_dssp CCCCCEETTTTEECCHHHHHHH-HHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTCS
T ss_pred ecCCCcccCCCCccHHHHHHHH-HHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCCC
Confidence 999653 233332 45556 8899999997777766677777776554
No 123
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=98.91 E-value=3.1e-09 Score=90.08 Aligned_cols=109 Identities=13% Similarity=0.147 Sum_probs=74.8
Q ss_pred CEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeec------------CCHHhhcc---cCCEEEEcCC
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE------------EDLDTMLP---KCDIVVVNTP 101 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~------------~~l~e~l~---~aDvVv~~~p 101 (223)
++|+|||+|.||..+|..|...|++|.+|+|++...+...+.+.... .+.+++.+ ++|+|++++|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~ 83 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIALTK 83 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEEec
Confidence 58999999999999999999999999999997533333333343211 13345544 8999999999
Q ss_pred CChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCcc
Q 027408 102 LTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (223)
Q Consensus 102 ~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~ 148 (223)
. ..+..++ ++....+++++++|+++.|- -..+.+.+.+.+.++.
T Consensus 84 ~-~~~~~v~-~~l~~~l~~~~~iv~~~~g~-~~~~~l~~~~~~~~vi 127 (316)
T 2ew2_A 84 A-QQLDAMF-KAIQPMITEKTYVLCLLNGL-GHEDVLEKYVPKENIL 127 (316)
T ss_dssp H-HHHHHHH-HHHGGGCCTTCEEEECCSSS-CTHHHHTTTSCGGGEE
T ss_pred c-ccHHHHH-HHHHHhcCCCCEEEEecCCC-CcHHHHHHHcCCccEE
Confidence 3 2333333 45667788999999998653 2345566666554433
No 124
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=98.90 E-value=2.6e-09 Score=92.51 Aligned_cols=95 Identities=13% Similarity=0.081 Sum_probs=70.7
Q ss_pred CCEEEEEcccHHHHHHHHHHccCC-------CeEEEEcCCCC-----ChhHHHhh--------------CCeecCCHHhh
Q 027408 36 GKTVGTVGCGRIGKLLLQRLKPFN-------CNLLYHDRVKM-----DPQLEKET--------------GAKFEEDLDTM 89 (223)
Q Consensus 36 g~~igIiG~G~iG~~iA~~l~~~G-------~~V~~~d~~~~-----~~~~~~~~--------------g~~~~~~l~e~ 89 (223)
.++|+|||+|.||..+|..|...| .+|.+|++++. ..+...+. ++...++++++
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQA 87 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHHHH
Confidence 468999999999999999998888 89999999764 22222211 22334678888
Q ss_pred cccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCc
Q 027408 90 LPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAI 132 (223)
Q Consensus 90 l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~ 132 (223)
++++|+|++++|. .....++ ++....+++++++|+++.|-.
T Consensus 88 ~~~aD~Vilav~~-~~~~~v~-~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 88 AEDADILIFVVPH-QFIGKIC-DQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp HTTCSEEEECCCG-GGHHHHH-HHHTTCSCTTCEEEECCCCBC
T ss_pred HcCCCEEEEeCCH-HHHHHHH-HHHHhhCCCCCEEEEECCccC
Confidence 8999999999994 2333333 455567888999999988754
No 125
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=98.89 E-value=4.9e-09 Score=90.46 Aligned_cols=90 Identities=20% Similarity=0.325 Sum_probs=67.9
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhC-----------CeecCCHHhhcccCCEEEEcCCCC
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETG-----------AKFEEDLDTMLPKCDIVVVNTPLT 103 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g-----------~~~~~~l~e~l~~aDvVv~~~p~~ 103 (223)
--.+|+|||+|.||..+|..|...|.+|.+|+|++...+...+.+ +...+++++ ++.+|+|++++|.
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~aDvVil~vk~- 90 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRATNDLEE-IKKEDILVIAIPV- 90 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CCTTEEEEECSCG-
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hcCCCEEEEECCH-
Confidence 457899999999999999999999999999999753333333333 355567888 8899999999993
Q ss_pred hhhhhcccHHHHhcCC-CCcEEEEcCCCC
Q 027408 104 EKTRGMFDKDRIAKMK-KGVLIVNNARGA 131 (223)
Q Consensus 104 ~~t~~~i~~~~~~~mk-~ga~ivn~srg~ 131 (223)
..+ ++.+..++ +++++|+++.|-
T Consensus 91 ~~~-----~~v~~~l~~~~~~vv~~~nGi 114 (335)
T 1z82_A 91 QYI-----REHLLRLPVKPSMVLNLSKGI 114 (335)
T ss_dssp GGH-----HHHHTTCSSCCSEEEECCCCC
T ss_pred HHH-----HHHHHHhCcCCCEEEEEeCCC
Confidence 333 44444455 788999999773
No 126
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=98.89 E-value=2.6e-09 Score=93.65 Aligned_cols=94 Identities=11% Similarity=0.167 Sum_probs=69.2
Q ss_pred CEEEEEcccHHHHHHHHHHccCC-------CeEEEEcCCCC-----ChhHHHhh--------------CCeecCCHHhhc
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFN-------CNLLYHDRVKM-----DPQLEKET--------------GAKFEEDLDTML 90 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G-------~~V~~~d~~~~-----~~~~~~~~--------------g~~~~~~l~e~l 90 (223)
++|+|||+|.||..+|..|...| .+|.+|+|++. ..+...+. ++...+++++++
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ea~ 101 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDLASVI 101 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESSTHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCHHHHH
Confidence 47999999999999999998878 89999999764 22222221 234456788888
Q ss_pred ccCCEEEEcCCCChhhhhcccHHHHh----cCCCCcEEEEcCCCCc
Q 027408 91 PKCDIVVVNTPLTEKTRGMFDKDRIA----KMKKGVLIVNNARGAI 132 (223)
Q Consensus 91 ~~aDvVv~~~p~~~~t~~~i~~~~~~----~mk~ga~ivn~srg~~ 132 (223)
+++|+|++++|. .....++ ++... .+++++++|+++.|-.
T Consensus 102 ~~aDvVilav~~-~~~~~vl-~~i~~~~~~~l~~~~ivvs~~~Gi~ 145 (375)
T 1yj8_A 102 NDADLLIFIVPC-QYLESVL-ASIKESESIKIASHAKAISLTKGFI 145 (375)
T ss_dssp TTCSEEEECCCH-HHHHHHH-HHHTC---CCCCTTCEEEECCCSCE
T ss_pred cCCCEEEEcCCH-HHHHHHH-HHHhhhhhccCCCCCEEEEeCCccc
Confidence 999999999993 3333332 34445 6788999999988733
No 127
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=98.87 E-value=1.1e-09 Score=95.48 Aligned_cols=94 Identities=20% Similarity=0.269 Sum_probs=69.7
Q ss_pred EEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhh--------------CCeecCCHHhhcccCCEEEEcCCCC
Q 027408 38 TVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKET--------------GAKFEEDLDTMLPKCDIVVVNTPLT 103 (223)
Q Consensus 38 ~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~--------------g~~~~~~l~e~l~~aDvVv~~~p~~ 103 (223)
+|+|||+|.||..+|..|...|++|.+|||++...+...+. ++....+++++++++|+|++++|.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVilav~~- 95 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPT- 95 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSSEEECCCH-
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcCCCEEEECCCh-
Confidence 89999999999999999999999999999975322322222 233446788889999999999993
Q ss_pred hhhhhcccHH----HHhcCCC-CcEEEEcCCCCcc
Q 027408 104 EKTRGMFDKD----RIAKMKK-GVLIVNNARGAIM 133 (223)
Q Consensus 104 ~~t~~~i~~~----~~~~mk~-ga~ivn~srg~~v 133 (223)
.....++ .+ ....+++ ++++|+++.|-..
T Consensus 96 ~~~~~v~-~~~~~gl~~~l~~~~~ivv~~~~gi~~ 129 (366)
T 1evy_A 96 QFLRGFF-EKSGGNLIAYAKEKQVPVLVCTKGIER 129 (366)
T ss_dssp HHHHHHH-HHHCHHHHHHHHHHTCCEEECCCSCCT
T ss_pred HHHHHHH-HHhHHHHHHhcCccCCEEEEECCcCCC
Confidence 3333333 33 4556777 8999999877443
No 128
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=98.85 E-value=1.6e-08 Score=95.77 Aligned_cols=117 Identities=12% Similarity=0.105 Sum_probs=82.0
Q ss_pred CCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHH-----------HhhC-------------CeecCCHHhhcc
Q 027408 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLE-----------KETG-------------AKFEEDLDTMLP 91 (223)
Q Consensus 36 g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~-----------~~~g-------------~~~~~~l~e~l~ 91 (223)
=++|||||+|.||..+|..+...|++|++||+++...+.. .+.| +...+++ +.++
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~ 392 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSY-GDFG 392 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSS-TTGG
T ss_pred CCEEEEECCChhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCH-HHHC
Confidence 4579999999999999999999999999999975322211 0112 2234566 6788
Q ss_pred cCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCC
Q 027408 92 KCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWN 156 (223)
Q Consensus 92 ~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~ 156 (223)
+||+|+.++|.+.+.+..+-.+..+.++++++|++.+.+ +....+.+.+. ..-...++..|.
T Consensus 393 ~aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntSt--l~i~~la~~~~-~~~~~ig~hf~~ 454 (715)
T 1wdk_A 393 NVDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTST--ISISLLAKALK-RPENFVGMHFFN 454 (715)
T ss_dssp GCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSS--SCHHHHGGGCS-CGGGEEEEECCS
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCC--CCHHHHHHHhc-CccceEEEEccC
Confidence 999999999988776665656777889999999755443 33445555543 222446666554
No 129
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=98.84 E-value=1.9e-08 Score=87.97 Aligned_cols=97 Identities=12% Similarity=0.152 Sum_probs=73.6
Q ss_pred CCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCee-------cCCHHhhcccCCEEEEcCCCCh-
Q 027408 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKF-------EEDLDTMLPKCDIVVVNTPLTE- 104 (223)
Q Consensus 33 ~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~-------~~~l~e~l~~aDvVv~~~p~~~- 104 (223)
.+.+++|+|+|.|.+|+.+++.++.+|++|+++|+++...+...+.+... ..++.+.+.++|+|+.+++...
T Consensus 164 ~l~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~ 243 (361)
T 1pjc_A 164 GVKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGR 243 (361)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCCcCCC
Confidence 47889999999999999999999999999999999764333333332211 1245566778999999987432
Q ss_pred hhhhcccHHHHhcCCCCcEEEEcCC
Q 027408 105 KTRGMFDKDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 105 ~t~~~i~~~~~~~mk~ga~ivn~sr 129 (223)
.+..++.++.++.|+++..++|++-
T Consensus 244 ~~~~li~~~~~~~~~~g~~ivdv~~ 268 (361)
T 1pjc_A 244 RAPILVPASLVEQMRTGSVIVDVAV 268 (361)
T ss_dssp SCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred CCCeecCHHHHhhCCCCCEEEEEec
Confidence 1334567889999999999999984
No 130
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.84 E-value=1.3e-08 Score=83.65 Aligned_cols=99 Identities=21% Similarity=0.304 Sum_probs=74.6
Q ss_pred CEEEEEcccHHHHHHHHHHccCCCeE-EEEcCCCCChhHHHhhCCeecCCHHhhc-ccCCEEEEcCCCChhhhhcccHHH
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNCNL-LYHDRVKMDPQLEKETGAKFEEDLDTML-PKCDIVVVNTPLTEKTRGMFDKDR 114 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~~V-~~~d~~~~~~~~~~~~g~~~~~~l~e~l-~~aDvVv~~~p~~~~t~~~i~~~~ 114 (223)
++|||||+|.||+.+++.+...|+++ .++|++.... . .+.++++++ .++|+|++|+|.. . ..+..
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~~~~----~----~~~~~~~l~~~~~DvVv~~~~~~--~---~~~~~ 67 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERNGFEIAAILDVRGEHE----K----MVRGIDEFLQREMDVAVEAASQQ--A---VKDYA 67 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCCCT----T----EESSHHHHTTSCCSEEEECSCHH--H---HHHHH
T ss_pred CEEEEECCCHHHHHHHHHHhcCCCEEEEEEecCcchh----h----hcCCHHHHhcCCCCEEEECCCHH--H---HHHHH
Confidence 47999999999999999998889997 6999875221 1 456899999 6999999999922 2 22334
Q ss_pred HhcCCCCcEEEEcCCCCccCH---HHHHHHHHhCCcc
Q 027408 115 IAKMKKGVLIVNNARGAIMDT---QAVVDACSSGHIA 148 (223)
Q Consensus 115 ~~~mk~ga~ivn~srg~~vd~---~al~~~L~~g~i~ 148 (223)
...++.|..+++.+.+..-+. ..|.+..++....
T Consensus 68 ~~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~~ 104 (236)
T 2dc1_A 68 EKILKAGIDLIVLSTGAFADRDFLSRVREVCRKTGRR 104 (236)
T ss_dssp HHHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHHCCC
T ss_pred HHHHHCCCcEEEECcccCChHHHHHHHHHHHHhcCCe
Confidence 566778999999988776666 5677776654443
No 131
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=98.83 E-value=3.5e-08 Score=89.09 Aligned_cols=117 Identities=13% Similarity=0.175 Sum_probs=80.3
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHh-----------hC-----------CeecCCHHhhccc
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE-----------TG-----------AKFEEDLDTMLPK 92 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~-----------~g-----------~~~~~~l~e~l~~ 92 (223)
.-++|+|||+|.||..+|..+...|++|++||+++...+.... .| ....+++ +.+++
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~-~~~~~ 114 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST-KELST 114 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG-GGGTT
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH-HHHCC
Confidence 3468999999999999999999999999999997532221111 01 1123466 56789
Q ss_pred CCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCC
Q 027408 93 CDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVW 155 (223)
Q Consensus 93 aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~ 155 (223)
||+|+.++|.+.+.+..+-++..+.++++++|++.+.+ +....|.+.+.. .-...++..|
T Consensus 115 aDlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~snTs~--~~~~~la~~~~~-~~~~ig~hf~ 174 (463)
T 1zcj_A 115 VDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSA--LNVDDIASSTDR-PQLVIGTHFF 174 (463)
T ss_dssp CSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHHTTSSC-GGGEEEEEEC
T ss_pred CCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCC--cCHHHHHHHhcC-CcceEEeecC
Confidence 99999999976555555556677788999999874443 344466665532 2344566655
No 132
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=98.79 E-value=4.2e-08 Score=93.10 Aligned_cols=116 Identities=14% Similarity=0.103 Sum_probs=80.0
Q ss_pred CEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHh-----------hC-------------CeecCCHHhhccc
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE-----------TG-------------AKFEEDLDTMLPK 92 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~-----------~g-------------~~~~~~l~e~l~~ 92 (223)
++|+|||.|.||..+|..+...|++|++||+++...+.... .| +...+++ +.+++
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~~ 391 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDY-ESFRD 391 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSS-GGGTT
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCH-HHHCC
Confidence 68999999999999999999999999999997532221100 11 2233456 56889
Q ss_pred CCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCC
Q 027408 93 CDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWN 156 (223)
Q Consensus 93 aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~ 156 (223)
||+|+.++|.+.+.+..+-.+..+.++++++|++.+.+ +....+.+.+.. .-...++..|.
T Consensus 392 aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntSt--l~i~~la~~~~~-p~~~iG~hf~~ 452 (725)
T 2wtb_A 392 VDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTST--IDLNKIGERTKS-QDRIVGAHFFS 452 (725)
T ss_dssp CSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHTTTCSC-TTTEEEEEECS
T ss_pred CCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCC--CCHHHHHHHhcC-CCCEEEecCCC
Confidence 99999999977766655556777889999998655443 333455554422 22345666554
No 133
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=98.79 E-value=8.3e-09 Score=93.61 Aligned_cols=107 Identities=10% Similarity=0.110 Sum_probs=78.0
Q ss_pred CEEEEEcccHHHHHHHHHHccC--CCeEEEEcCCCCChhHHHh-------------------hCCeecCCHHhhcccCCE
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPF--NCNLLYHDRVKMDPQLEKE-------------------TGAKFEEDLDTMLPKCDI 95 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~--G~~V~~~d~~~~~~~~~~~-------------------~g~~~~~~l~e~l~~aDv 95 (223)
++|+|||+|.||..+|..|... |++|++||+++...+.... .++...+++.+.+++||+
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~aDv 89 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEADL 89 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhcCCE
Confidence 6899999999999999999876 7899999987532222111 123444577788889999
Q ss_pred EEEcCCCChh--------------hhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHh
Q 027408 96 VVVNTPLTEK--------------TRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSS 144 (223)
Q Consensus 96 Vv~~~p~~~~--------------t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~ 144 (223)
|++|+|.... ... +.+...+.++++++||+.|.-.+-..+.+.+.+.+
T Consensus 90 vii~Vptp~~~~g~~~~~~~dl~~v~~-~~~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~ 151 (481)
T 2o3j_A 90 IFISVNTPTKMYGRGKGMAPDLKYVES-VSRTIAQYAGGPKIVVEKSTVPVKAAESIGCILRE 151 (481)
T ss_dssp EEECCCCCBCCSSTTTTTSBCCHHHHH-HHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEecCCccccccccccCCCcHHHHHH-HHHHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHH
Confidence 9999884321 122 22556678999999999887666566777777876
No 134
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=98.79 E-value=1.4e-08 Score=91.95 Aligned_cols=105 Identities=15% Similarity=0.128 Sum_probs=77.1
Q ss_pred CCEEEEEcccHHHHHHHHHHccC-CC-eEEEEcCCCC----ChhHHHh---------------------hC-CeecCCHH
Q 027408 36 GKTVGTVGCGRIGKLLLQRLKPF-NC-NLLYHDRVKM----DPQLEKE---------------------TG-AKFEEDLD 87 (223)
Q Consensus 36 g~~igIiG~G~iG~~iA~~l~~~-G~-~V~~~d~~~~----~~~~~~~---------------------~g-~~~~~~l~ 87 (223)
-++|+|||+|.||..+|..|... |+ +|++||+++. ..+...+ .+ +...++ .
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd-~ 96 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPD-F 96 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESC-G
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCc-H
Confidence 36899999999999999999999 99 9999999875 2221111 12 233344 6
Q ss_pred hhcccCCEEEEcCCCCh--------hhhhc--ccHHHHhcCCCCcEEEEcCCCCccCHHHHHHH
Q 027408 88 TMLPKCDIVVVNTPLTE--------KTRGM--FDKDRIAKMKKGVLIVNNARGAIMDTQAVVDA 141 (223)
Q Consensus 88 e~l~~aDvVv~~~p~~~--------~t~~~--i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~ 141 (223)
+.+++||+|++|+|... +...+ ..+...+.+++|+++|+.|.-++-..+.+.+.
T Consensus 97 ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~~~ 160 (478)
T 3g79_A 97 SRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAKQ 160 (478)
T ss_dssp GGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHHHH
T ss_pred HHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHHHH
Confidence 78899999999999542 22222 23567788999999999998777666667653
No 135
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=98.79 E-value=8.4e-09 Score=86.47 Aligned_cols=92 Identities=18% Similarity=0.213 Sum_probs=66.3
Q ss_pred CEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhh---CC----e-ecCCHHhhcccCCEEEEcCCCChhhhh
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKET---GA----K-FEEDLDTMLPKCDIVVVNTPLTEKTRG 108 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~---g~----~-~~~~l~e~l~~aDvVv~~~p~~~~t~~ 108 (223)
++|+|||+|.||..+|..|...|.+|.+|+|++...+..... +. . ..++ .+.++++|+|++++|... +..
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~d~vi~~v~~~~-~~~ 78 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTAND-PDFLATSDLLLVTLKAWQ-VSD 78 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESC-HHHHHTCSEEEECSCGGG-HHH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeeecC-ccccCCCCEEEEEecHHh-HHH
Confidence 489999999999999999999999999999976433221111 11 0 1233 466788999999999543 333
Q ss_pred cccHHHHhcCCCCcEEEEcCCCC
Q 027408 109 MFDKDRIAKMKKGVLIVNNARGA 131 (223)
Q Consensus 109 ~i~~~~~~~mk~ga~ivn~srg~ 131 (223)
++ ++....+++++++|+++.|-
T Consensus 79 v~-~~l~~~l~~~~~vv~~~~g~ 100 (291)
T 1ks9_A 79 AV-KSLASTLPVTTPILLIHNGM 100 (291)
T ss_dssp HH-HHHHTTSCTTSCEEEECSSS
T ss_pred HH-HHHHhhCCCCCEEEEecCCC
Confidence 33 45667788899999987653
No 136
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.76 E-value=3.9e-08 Score=74.65 Aligned_cols=103 Identities=14% Similarity=0.190 Sum_probs=77.4
Q ss_pred CCCCEEEEEcc----cHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhc
Q 027408 34 LEGKTVGTVGC----GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGM 109 (223)
Q Consensus 34 l~g~~igIiG~----G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~ 109 (223)
++-++|+|||+ |.+|..+++.+...|++|+.+|++. .+ -.|...+.+++|+....|++++++| .+....+
T Consensus 12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~--~~---i~G~~~~~s~~el~~~vDlvii~vp-~~~v~~v 85 (138)
T 1y81_A 12 KEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNY--DE---IEGLKCYRSVRELPKDVDVIVFVVP-PKVGLQV 85 (138)
T ss_dssp --CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTC--SE---ETTEECBSSGGGSCTTCCEEEECSC-HHHHHHH
T ss_pred cCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCC--Ce---ECCeeecCCHHHhCCCCCEEEEEeC-HHHHHHH
Confidence 56778999999 9999999999999999988888764 11 2477777899999999999999999 3555555
Q ss_pred ccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCcc
Q 027408 110 FDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (223)
Q Consensus 110 i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~ 148 (223)
+ ++..+ .+.++++++.+. ..+++.+..++..+.
T Consensus 86 ~-~~~~~-~g~~~i~~~~~~----~~~~l~~~a~~~Gi~ 118 (138)
T 1y81_A 86 A-KEAVE-AGFKKLWFQPGA----ESEEIRRFLEKAGVE 118 (138)
T ss_dssp H-HHHHH-TTCCEEEECTTS----CCHHHHHHHHHHTCE
T ss_pred H-HHHHH-cCCCEEEEcCcc----HHHHHHHHHHHCCCE
Confidence 4 34444 566677776643 257778877777776
No 137
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=98.74 E-value=6.5e-08 Score=83.28 Aligned_cols=119 Identities=8% Similarity=-0.037 Sum_probs=87.1
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHH-----------hh--------------CCeecCCHHhh
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEK-----------ET--------------GAKFEEDLDTM 89 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~-----------~~--------------g~~~~~~l~e~ 89 (223)
.-.+|+|||.|.||+.+|..+...|++|..||+++...+... +. .+...+++++.
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~a 84 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEA 84 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHhH
Confidence 456899999999999999999999999999998753211100 00 12345688899
Q ss_pred cccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCC
Q 027408 90 LPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWN 156 (223)
Q Consensus 90 l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~ 156 (223)
+++||+|+-++|.+-+.+.-+-+++-+.++++++|-..+++ +....|.+.+.. .-+..++--|.
T Consensus 85 ~~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSs--l~is~ia~~~~~-p~r~ig~HffN 148 (319)
T 3ado_A 85 VEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC--LLPSKLFTGLAH-VKQCIVAHPVN 148 (319)
T ss_dssp TTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS--CCHHHHHTTCTT-GGGEEEEEECS
T ss_pred hccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhh--ccchhhhhhccC-CCcEEEecCCC
Confidence 99999999999988888888888888889999998655554 455667666543 44445555443
No 138
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=98.73 E-value=3.5e-08 Score=87.61 Aligned_cols=96 Identities=24% Similarity=0.320 Sum_probs=76.2
Q ss_pred cCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCC------CChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChh
Q 027408 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVK------MDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEK 105 (223)
Q Consensus 32 ~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~------~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~ 105 (223)
.-|.||+|+|||+|+-|.+-|..|+..|.+|++--|.. .+.+.+.+.|+... +.+|+++.||+|++.+|+..+
T Consensus 33 ~~lkgK~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr~~s~~e~~~S~~~A~~~Gf~v~-~~~eA~~~ADvV~~L~PD~~q 111 (491)
T 3ulk_A 33 SYLQGKKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVG-TYEELIPQADLVINLTPDKQH 111 (491)
T ss_dssp GGGTTSEEEEESCSHHHHHHHHHHHHTTCEEEEEECHHHHHTTCHHHHHHHHTTCEEE-EHHHHGGGCSEEEECSCGGGH
T ss_pred HHHcCCEEEEeCCChHhHHHHhHHHhcCCcEEEEeCCCCcccccchHHHHHHCCCEec-CHHHHHHhCCEEEEeCChhhH
Confidence 45899999999999999999999999999988765521 22345666787765 799999999999999995433
Q ss_pred hhhcccHHHHhcCCCCcEEEEcCCCC
Q 027408 106 TRGMFDKDRIAKMKKGVLIVNNARGA 131 (223)
Q Consensus 106 t~~~i~~~~~~~mk~ga~ivn~srg~ 131 (223)
. -+-++....||+|+.+. .|.|-
T Consensus 112 ~--~vy~~I~p~lk~G~~L~-faHGF 134 (491)
T 3ulk_A 112 S--DVVRTVQPLMKDGAALG-YSHGF 134 (491)
T ss_dssp H--HHHHHHGGGSCTTCEEE-ESSCH
T ss_pred H--HHHHHHHhhCCCCCEEE-ecCcc
Confidence 3 33467999999999886 55554
No 139
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=98.71 E-value=1.6e-08 Score=84.41 Aligned_cols=106 Identities=20% Similarity=0.198 Sum_probs=74.9
Q ss_pred CCCCCEEEEEcccHHHHHHHHHHccCCC-eEEEEcCCCCCh-hHHHhhCCeecCCHHhhcccCCEEEEcCCCChhh-hhc
Q 027408 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDP-QLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKT-RGM 109 (223)
Q Consensus 33 ~l~g~~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~-~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t-~~~ 109 (223)
.+.| +++|+|.|.+|++++..|...|. +|.+++|+.... +.++.++.....++.+.++++|+|+.++|..-.. ...
T Consensus 106 ~~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~aDiVInatp~gm~p~~~~ 184 (253)
T 3u62_A 106 EVKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKIFSLDQLDEVVKKAKSLFNTTSVGMKGEELP 184 (253)
T ss_dssp CCCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEEEEGGGHHHHHHTCSEEEECSSTTTTSCCCS
T ss_pred CCCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcccCCHHHHHhhhcCCCEEEECCCCCCCCCCCC
Confidence 4678 99999999999999999999998 899999975221 1122222223457778889999999999853211 123
Q ss_pred ccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhC
Q 027408 110 FDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSG 145 (223)
Q Consensus 110 i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g 145 (223)
++.+. ++++.+++++.-+ ...-+.++.+.|
T Consensus 185 i~~~~---l~~~~~V~Divy~---~T~ll~~A~~~G 214 (253)
T 3u62_A 185 VSDDS---LKNLSLVYDVIYF---DTPLVVKARKLG 214 (253)
T ss_dssp CCHHH---HTTCSEEEECSSS---CCHHHHHHHHHT
T ss_pred CCHHH---hCcCCEEEEeeCC---CcHHHHHHHHCC
Confidence 44333 5689999999888 455555566555
No 140
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=98.70 E-value=4.9e-08 Score=82.11 Aligned_cols=94 Identities=17% Similarity=0.137 Sum_probs=65.8
Q ss_pred CCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhcccHHHH
Q 027408 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRI 115 (223)
Q Consensus 36 g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~ 115 (223)
++++.|+|.|.+|++++..|...|.+|.+++|+....+...++++... +++++ .++|+||.++|........++.+.+
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~~~~~~-~~~~l-~~~DiVInaTp~Gm~~~~~l~~~~l 195 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCDCF-MEPPK-SAFDLIINATSASLHNELPLNKEVL 195 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTCEEE-SSCCS-SCCSEEEECCTTCCCCSCSSCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEe-cHHHh-ccCCEEEEcccCCCCCCCCCChHHH
Confidence 899999999999999999999999999999998755433326665443 44444 3899999999954322122444422
Q ss_pred -hcCCCCcEEEEcCCCC
Q 027408 116 -AKMKKGVLIVNNARGA 131 (223)
Q Consensus 116 -~~mk~ga~ivn~srg~ 131 (223)
+.++++.+++|+...+
T Consensus 196 ~~~l~~~~~v~D~vY~P 212 (269)
T 3phh_A 196 KGYFKEGKLAYDLAYGF 212 (269)
T ss_dssp HHHHHHCSEEEESCCSS
T ss_pred HhhCCCCCEEEEeCCCC
Confidence 2455666777766554
No 141
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=98.70 E-value=1.2e-08 Score=86.19 Aligned_cols=109 Identities=14% Similarity=0.155 Sum_probs=72.4
Q ss_pred cCCCCCEEEEEcccHHHHHHHHHHccCCC-eEEEEcCCCCChh-HHHhhCCeecCCHHhhcccCCEEEEcCCCC--hhhh
Q 027408 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQ-LEKETGAKFEEDLDTMLPKCDIVVVNTPLT--EKTR 107 (223)
Q Consensus 32 ~~l~g~~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~-~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~--~~t~ 107 (223)
..+.|+++.|+|.|.+|++++..|...|+ +|.+++|+....+ .+........++++++++++|+||.++|.. +...
T Consensus 113 ~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~~aDiVInaTp~Gm~~~~~ 192 (277)
T 3don_A 113 EGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLSHAESHLDEFDIIINTTPAGMNGNTD 192 (277)
T ss_dssp TTGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCCEEECHHHHHHTGGGCSEEEECCC-------C
T ss_pred CCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhcccccHhhHHHHhcCCCEEEECccCCCCCCCc
Confidence 46889999999999999999999999999 8999999763222 111111112345667788999999999953 2211
Q ss_pred hcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhC
Q 027408 108 GMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSG 145 (223)
Q Consensus 108 ~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g 145 (223)
..++ .+.++++.+++|+.-.+.. . .+++..++.
T Consensus 193 ~~l~---~~~l~~~~~V~D~vY~P~~-T-~ll~~A~~~ 225 (277)
T 3don_A 193 SVIS---LNRLASHTLVSDIVYNPYK-T-PILIEAEQR 225 (277)
T ss_dssp CSSC---CTTCCSSCEEEESCCSSSS-C-HHHHHHHHT
T ss_pred CCCC---HHHcCCCCEEEEecCCCCC-C-HHHHHHHHC
Confidence 1122 3567888899998766443 2 344444443
No 142
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.68 E-value=2e-08 Score=78.97 Aligned_cols=95 Identities=16% Similarity=0.158 Sum_probs=67.0
Q ss_pred cCCCCCEEEEEcccHHHHHHHHHHccC-CCeEEEEcCCCCChhHHHhhCCeec----CC---HHhh--cccCCEEEEcCC
Q 027408 32 YDLEGKTVGTVGCGRIGKLLLQRLKPF-NCNLLYHDRVKMDPQLEKETGAKFE----ED---LDTM--LPKCDIVVVNTP 101 (223)
Q Consensus 32 ~~l~g~~igIiG~G~iG~~iA~~l~~~-G~~V~~~d~~~~~~~~~~~~g~~~~----~~---l~e~--l~~aDvVv~~~p 101 (223)
.++.+++|+|+|+|.+|+.+|+.|+.. |++|+++|+++...+.....|+... .+ +.++ +.++|+|++++|
T Consensus 35 ~~~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~ 114 (183)
T 3c85_A 35 INPGHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMP 114 (183)
T ss_dssp BCCTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCS
T ss_pred cCCCCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCC
Confidence 357788999999999999999999998 9999999997643344444565322 22 3444 678999999999
Q ss_pred CChhhhhcccHHHHhcCCCCcEEEEcC
Q 027408 102 LTEKTRGMFDKDRIAKMKKGVLIVNNA 128 (223)
Q Consensus 102 ~~~~t~~~i~~~~~~~mk~ga~ivn~s 128 (223)
..+.+..+ ...++.+.+...++..+
T Consensus 115 ~~~~~~~~--~~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 115 HHQGNQTA--LEQLQRRNYKGQIAAIA 139 (183)
T ss_dssp SHHHHHHH--HHHHHHTTCCSEEEEEE
T ss_pred ChHHHHHH--HHHHHHHCCCCEEEEEE
Confidence 65444333 24556666666666543
No 143
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=98.68 E-value=1.8e-07 Score=80.17 Aligned_cols=107 Identities=15% Similarity=0.062 Sum_probs=77.0
Q ss_pred CEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCC---------------eecCCHHhhcccCCEEEEcCC
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA---------------KFEEDLDTMLPKCDIVVVNTP 101 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~---------------~~~~~l~e~l~~aDvVv~~~p 101 (223)
++|+|||.|.||..+|..|...|.+|.+++|+. .+..++.|+ ....+++++.+.+|+|++++|
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVilavK 80 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD--YETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLCIK 80 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT--HHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEECCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh--HHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEEecC
Confidence 689999999999999999999999999999975 233333332 123466777668999999999
Q ss_pred CChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCcc
Q 027408 102 LTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (223)
Q Consensus 102 ~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~ 148 (223)
.... ..+ -++....++++++||.+..|= -.++.+.+.+...++.
T Consensus 81 ~~~~-~~~-l~~l~~~l~~~t~Iv~~~nGi-~~~~~l~~~~~~~~vl 124 (320)
T 3i83_A 81 VVEG-ADR-VGLLRDAVAPDTGIVLISNGI-DIEPEVAAAFPDNEVI 124 (320)
T ss_dssp CCTT-CCH-HHHHTTSCCTTCEEEEECSSS-SCSHHHHHHSTTSCEE
T ss_pred CCCh-HHH-HHHHHhhcCCCCEEEEeCCCC-ChHHHHHHHCCCCcEE
Confidence 5442 222 255666788899999888763 3346677777665554
No 144
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=98.67 E-value=5.9e-08 Score=86.79 Aligned_cols=110 Identities=16% Similarity=0.137 Sum_probs=75.8
Q ss_pred CCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCe-ecCCHHhh---------------cccCCEEE
Q 027408 34 LEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAK-FEEDLDTM---------------LPKCDIVV 97 (223)
Q Consensus 34 l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~-~~~~l~e~---------------l~~aDvVv 97 (223)
-.|+++.|||+|.||..+|..|...|++|++||+++...+........ +...++++ +++||+|+
T Consensus 9 ~~~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd~~~aDvvi 88 (431)
T 3ojo_A 9 HHGSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTPEASDVFI 88 (431)
T ss_dssp ---CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESSCCCCSEEE
T ss_pred ccCCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCchhhCCEEE
Confidence 478999999999999999999999999999999976433332221111 11122222 45799999
Q ss_pred EcCCCChhh--------hhc--ccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHH
Q 027408 98 VNTPLTEKT--------RGM--FDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACS 143 (223)
Q Consensus 98 ~~~p~~~~t--------~~~--i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~ 143 (223)
+|+|..... ..+ ..+...+.+++|+++|+.|.-++-..+.+.+.+.
T Consensus 89 i~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i~ 144 (431)
T 3ojo_A 89 IAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPVI 144 (431)
T ss_dssp ECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHHH
T ss_pred EEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHHH
Confidence 999954321 112 1356778899999999999888777777777653
No 145
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=98.67 E-value=1.1e-07 Score=81.04 Aligned_cols=111 Identities=15% Similarity=0.254 Sum_probs=76.2
Q ss_pred cCCCCCEEEEEcccHHHHHHHHHHccCCC-eEEEEcCCCCC-hhHHHhhCC---eec--CCHHhhcccCCEEEEcCCCCh
Q 027408 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMD-PQLEKETGA---KFE--EDLDTMLPKCDIVVVNTPLTE 104 (223)
Q Consensus 32 ~~l~g~~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~-~~~~~~~g~---~~~--~~l~e~l~~aDvVv~~~p~~~ 104 (223)
.++.+++++|+|.|.+|+.++..|...|+ +|.+++|+... .+.++.++. ... +++.+.+.++|+||.++|...
T Consensus 137 ~~l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~~~~~~aDivIn~t~~~~ 216 (297)
T 2egg_A 137 ITLDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFSLAEAETRLAEYDIIINTTSVGM 216 (297)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECHHHHHHTGGGCSEEEECSCTTC
T ss_pred CCCCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceeeHHHHHhhhccCCEEEECCCCCC
Confidence 35789999999999999999999999998 89999997522 233444332 211 346677889999999999553
Q ss_pred hhh--h-cccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCc
Q 027408 105 KTR--G-MFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHI 147 (223)
Q Consensus 105 ~t~--~-~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i 147 (223)
... . .++ .+.++++.+++|++-.+... .|.+..++...
T Consensus 217 ~~~~~~~~i~---~~~l~~~~~v~D~~y~P~~T--~ll~~A~~~G~ 257 (297)
T 2egg_A 217 HPRVEVQPLS---LERLRPGVIVSDIIYNPLET--KWLKEAKARGA 257 (297)
T ss_dssp SSCCSCCSSC---CTTCCTTCEEEECCCSSSSC--HHHHHHHHTTC
T ss_pred CCCCCCCCCC---HHHcCCCCEEEEcCCCCCCC--HHHHHHHHCcC
Confidence 211 0 122 24577889999998754332 35555555443
No 146
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=98.66 E-value=5.3e-08 Score=80.14 Aligned_cols=71 Identities=11% Similarity=0.160 Sum_probs=57.1
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhcccHHH
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDR 114 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~ 114 (223)
.-++|+|||+|.||.++|+.|+..|++|.+|++. ++ +++|| ++++|.. ....++ .+.
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~------------------~~-~~~aD--ilavP~~-ai~~vl-~~l 61 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP------------------ED-IRDFE--LVVIDAH-GVEGYV-EKL 61 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG------------------GG-GGGCS--EEEECSS-CHHHHH-HHH
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH------------------HH-hccCC--EEEEcHH-HHHHHH-HHH
Confidence 3468999999999999999999999999999982 12 56789 7889965 344443 566
Q ss_pred HhcCCCCcEEEEcC
Q 027408 115 IAKMKKGVLIVNNA 128 (223)
Q Consensus 115 ~~~mk~ga~ivn~s 128 (223)
...+++++++++++
T Consensus 62 ~~~l~~g~ivvd~s 75 (232)
T 3dfu_A 62 SAFARRGQMFLHTS 75 (232)
T ss_dssp HTTCCTTCEEEECC
T ss_pred HHhcCCCCEEEEEC
Confidence 67789999999985
No 147
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=98.65 E-value=9.3e-09 Score=86.49 Aligned_cols=87 Identities=17% Similarity=0.167 Sum_probs=58.4
Q ss_pred CEEEEEcccHHHHHHHHHHccCCCeE-EEEcCCCCChh-HHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhcccHHH
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNCNL-LYHDRVKMDPQ-LEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDR 114 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~~V-~~~d~~~~~~~-~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~ 114 (223)
++|||||+|.||+.+++.+... ++| .+||+++...+ ..+.++. ...+++++++++|+|++++|... . .+.
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~-~~v~~v~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~DvVilav~~~~-~-----~~v 74 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLKDR-YEIGYILSRSIDRARNLAEVYGG-KAATLEKHPELNGVVFVIVPDRY-I-----KTV 74 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCC-CCCSSCCCCC---CEEECSCTTT-H-----HHH
T ss_pred ceEEEEeCCHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHHHHHcCC-ccCCHHHHHhcCCEEEEeCChHH-H-----HHH
Confidence 4799999999999999999877 888 58998753322 2234565 55678888899999999999432 1 344
Q ss_pred HhcC-CCCcEEEEcCCCC
Q 027408 115 IAKM-KKGVLIVNNARGA 131 (223)
Q Consensus 115 ~~~m-k~ga~ivn~srg~ 131 (223)
+..+ +++++|||++-+-
T Consensus 75 ~~~l~~~~~ivi~~s~~~ 92 (276)
T 2i76_A 75 ANHLNLGDAVLVHCSGFL 92 (276)
T ss_dssp HTTTCCSSCCEEECCSSS
T ss_pred HHHhccCCCEEEECCCCC
Confidence 4444 5789999998553
No 148
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.63 E-value=1.3e-07 Score=72.49 Aligned_cols=98 Identities=15% Similarity=0.109 Sum_probs=64.4
Q ss_pred cCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHH-hhCCeec----CC---HHhh-cccCCEEEEcCCC
Q 027408 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEK-ETGAKFE----ED---LDTM-LPKCDIVVVNTPL 102 (223)
Q Consensus 32 ~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~-~~g~~~~----~~---l~e~-l~~aDvVv~~~p~ 102 (223)
....+++|.|+|+|.+|+.+++.|+..|.+|+++++++...+... ..+...+ .+ +.+. +.++|+|++++|.
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~ 94 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTND 94 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSC
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCC
Confidence 457889999999999999999999999999999999764333333 3444321 12 2233 5689999999985
Q ss_pred ChhhhhcccHHHHhcCCCCcEEEEcCCCC
Q 027408 103 TEKTRGMFDKDRIAKMKKGVLIVNNARGA 131 (223)
Q Consensus 103 ~~~t~~~i~~~~~~~mk~ga~ivn~srg~ 131 (223)
...+.. -....+.+.+...++-..++.
T Consensus 95 ~~~~~~--~~~~~~~~~~~~~iv~~~~~~ 121 (155)
T 2g1u_A 95 DSTNFF--ISMNARYMFNVENVIARVYDP 121 (155)
T ss_dssp HHHHHH--HHHHHHHTSCCSEEEEECSSG
T ss_pred cHHHHH--HHHHHHHHCCCCeEEEEECCH
Confidence 433322 234445445555565555544
No 149
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=98.63 E-value=2.4e-07 Score=79.15 Aligned_cols=108 Identities=16% Similarity=0.164 Sum_probs=75.6
Q ss_pred CEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCe--------------ecCCHHhhcccCCEEEEcCCC
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAK--------------FEEDLDTMLPKCDIVVVNTPL 102 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~--------------~~~~l~e~l~~aDvVv~~~p~ 102 (223)
++|+|||.|.||..+|..|...|.+|.+|+|+. .+..++.|+. ..++.++ +..+|+|++++|.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~-~~~~D~vilavk~ 79 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD--YEAIAGNGLKVFSINGDFTLPHVKGYRAPEE-IGPMDLVLVGLKT 79 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT--HHHHHHTCEEEEETTCCEEESCCCEESCHHH-HCCCSEEEECCCG
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc--HHHHHhCCCEEEcCCCeEEEeeceeecCHHH-cCCCCEEEEecCC
Confidence 589999999999999999999999999999965 2333333321 1245554 5789999999994
Q ss_pred ChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEE
Q 027408 103 TEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGY 150 (223)
Q Consensus 103 ~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a 150 (223)
.. +.. +-++....++++++||.+..|= -.++.+.+.+...++.+.
T Consensus 80 ~~-~~~-~l~~l~~~l~~~~~iv~l~nGi-~~~~~l~~~~~~~~v~~~ 124 (312)
T 3hn2_A 80 FA-NSR-YEELIRPLVEEGTQILTLQNGL-GNEEALATLFGAERIIGG 124 (312)
T ss_dssp GG-GGG-HHHHHGGGCCTTCEEEECCSSS-SHHHHHHHHTCGGGEEEE
T ss_pred CC-cHH-HHHHHHhhcCCCCEEEEecCCC-CcHHHHHHHCCCCcEEEE
Confidence 33 222 2355666788899999988762 235567777765555443
No 150
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=98.62 E-value=1.8e-08 Score=85.61 Aligned_cols=105 Identities=11% Similarity=0.082 Sum_probs=71.9
Q ss_pred CEEEEEcccHHHHHHHHHHccC-----C-CeEEEEcCCCCChhHHHh-hCCeecC-------------CHHhhcccCCEE
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPF-----N-CNLLYHDRVKMDPQLEKE-TGAKFEE-------------DLDTMLPKCDIV 96 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~-----G-~~V~~~d~~~~~~~~~~~-~g~~~~~-------------~l~e~l~~aDvV 96 (223)
++|+|||+|.||..+|..|... | .+|.+|+| +...+...+ .|+.... +..+.+..+|+|
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v 87 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEVGTVDYI 87 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHHCCEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhcCCeEEEeCCCCeEEecceEecCccccCCCCEE
Confidence 5899999999999999999887 8 99999998 422333333 4543221 233456789999
Q ss_pred EEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCH-HHHHHHHHhCC
Q 027408 97 VVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDT-QAVVDACSSGH 146 (223)
Q Consensus 97 v~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~-~al~~~L~~g~ 146 (223)
++++|... +..++ ++....++++++||++..| ++. +.+.+.+...+
T Consensus 88 il~vk~~~-~~~v~-~~i~~~l~~~~~iv~~~nG--~~~~~~l~~~l~~~~ 134 (317)
T 2qyt_A 88 LFCTKDYD-MERGV-AEIRPMIGQNTKILPLLNG--ADIAERMRTYLPDTV 134 (317)
T ss_dssp EECCSSSC-HHHHH-HHHGGGEEEEEEEEECSCS--SSHHHHHTTTSCTTT
T ss_pred EEecCccc-HHHHH-HHHHhhcCCCCEEEEccCC--CCcHHHHHHHCCCCc
Confidence 99999544 23332 4455667788999998776 343 45555554433
No 151
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.62 E-value=4.3e-08 Score=74.97 Aligned_cols=104 Identities=16% Similarity=0.139 Sum_probs=77.4
Q ss_pred CCEEEEEcc----cHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhccc
Q 027408 36 GKTVGTVGC----GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 111 (223)
Q Consensus 36 g~~igIiG~----G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~ 111 (223)
-++|+|||+ |.+|..+++.+...|++|+.+|++....+ ..|...+.+++|+....|++++++|. +....++
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~---i~G~~~~~sl~el~~~~Dlvii~vp~-~~v~~v~- 87 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKT---LLGQQGYATLADVPEKVDMVDVFRNS-EAAWGVA- 87 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSE---ETTEECCSSTTTCSSCCSEEECCSCS-THHHHHH-
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCcccccc---cCCeeccCCHHHcCCCCCEEEEEeCH-HHHHHHH-
Confidence 578999999 89999999999999999888888541011 24777777899998899999999994 5555554
Q ss_pred HHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccE
Q 027408 112 KDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAG 149 (223)
Q Consensus 112 ~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~ 149 (223)
++..+ .+.+.++++.+ .. ++++.+.+++..++.
T Consensus 88 ~~~~~-~g~~~i~i~~~--~~--~~~l~~~a~~~Gi~~ 120 (145)
T 2duw_A 88 QEAIA-IGAKTLWLQLG--VI--NEQAAVLAREAGLSV 120 (145)
T ss_dssp HHHHH-HTCCEEECCTT--CC--CHHHHHHHHTTTCEE
T ss_pred HHHHH-cCCCEEEEcCC--hH--HHHHHHHHHHcCCEE
Confidence 33444 45567777653 22 678888888877763
No 152
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=98.61 E-value=3e-07 Score=78.97 Aligned_cols=89 Identities=21% Similarity=0.358 Sum_probs=69.8
Q ss_pred CCCEEEEEcccHHHHHHHHHHcc-CC-CeEEEEcCCCCChhHHHh----hCC--eecCCHHhhcccCCEEEEcCCCChhh
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKP-FN-CNLLYHDRVKMDPQLEKE----TGA--KFEEDLDTMLPKCDIVVVNTPLTEKT 106 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~-~G-~~V~~~d~~~~~~~~~~~----~g~--~~~~~l~e~l~~aDvVv~~~p~~~~t 106 (223)
..++++|||.|.+|+.+++.+.. ++ .+|.+|||+ +..+.+++ +|+ ... ++++++++||+|++|+|..
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~-~a~~la~~l~~~~g~~~~~~-~~~eav~~aDIVi~aT~s~--- 194 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY-ASPEILERIGRRCGVPARMA-APADIAAQADIVVTATRST--- 194 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT-CCHHHHHHHHHHHTSCEEEC-CHHHHHHHCSEEEECCCCS---
T ss_pred CCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc-HHHHHHHHHHHhcCCeEEEe-CHHHHHhhCCEEEEccCCC---
Confidence 57899999999999999999875 44 479999998 66555443 355 345 8999999999999999954
Q ss_pred hhcccHHHHhcCCCCcEEEEcCCCC
Q 027408 107 RGMFDKDRIAKMKKGVLIVNNARGA 131 (223)
Q Consensus 107 ~~~i~~~~~~~mk~ga~ivn~srg~ 131 (223)
..++. .+.+++|++|++++...
T Consensus 195 ~pvl~---~~~l~~G~~V~~vGs~~ 216 (313)
T 3hdj_A 195 TPLFA---GQALRAGAFVGAIGSSL 216 (313)
T ss_dssp SCSSC---GGGCCTTCEEEECCCSS
T ss_pred CcccC---HHHcCCCcEEEECCCCC
Confidence 34454 24689999999998643
No 153
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=98.61 E-value=5.9e-08 Score=83.75 Aligned_cols=91 Identities=20% Similarity=0.195 Sum_probs=65.6
Q ss_pred CCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCe-------------ecCCHHhhcccCCEEEEcCCC
Q 027408 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAK-------------FEEDLDTMLPKCDIVVVNTPL 102 (223)
Q Consensus 36 g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~-------------~~~~l~e~l~~aDvVv~~~p~ 102 (223)
.++|+|||+|.||..+|..|...|.+|.+++|.. ..+...+.|.. ..+++++ +..+|+|++++|.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~Vilavk~ 80 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARGA-TLQALQTAGLRLTEDGATHTLPVRATHDAAA-LGEQDVVIVAVKA 80 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCHH-HHHHHHHTCEEEEETTEEEEECCEEESCHHH-HCCCSEEEECCCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEEChH-HHHHHHHCCCEEecCCCeEEEeeeEECCHHH-cCCCCEEEEeCCc
Confidence 4689999999999999999999999999999852 22333333432 2346766 4889999999993
Q ss_pred ChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 027408 103 TEKTRGMFDKDRIAKMKKGVLIVNNARG 130 (223)
Q Consensus 103 ~~~t~~~i~~~~~~~mk~ga~ivn~srg 130 (223)
..+..++ ++....++++++||.+..|
T Consensus 81 -~~~~~~~-~~l~~~l~~~~~iv~~~nG 106 (335)
T 3ghy_A 81 -PALESVA-AGIAPLIGPGTCVVVAMNG 106 (335)
T ss_dssp -HHHHHHH-GGGSSSCCTTCEEEECCSS
T ss_pred -hhHHHHH-HHHHhhCCCCCEEEEECCC
Confidence 2333222 2333456789999999988
No 154
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=98.59 E-value=1.4e-07 Score=80.93 Aligned_cols=106 Identities=16% Similarity=0.182 Sum_probs=70.7
Q ss_pred CCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCC-------------eecCCHHhhcccCCEEEEc
Q 027408 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA-------------KFEEDLDTMLPKCDIVVVN 99 (223)
Q Consensus 33 ~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~-------------~~~~~l~e~l~~aDvVv~~ 99 (223)
....++|+|||.|.||..+|..|...|.+|.+| +++...+...+.|. ...+++++ +..+|+|+++
T Consensus 16 ~~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~vila 93 (318)
T 3hwr_A 16 YFQGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPSA-VQGADLVLFC 93 (318)
T ss_dssp ----CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGGG-GTTCSEEEEC
T ss_pred hccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHH-cCCCCEEEEE
Confidence 356789999999999999999999999999999 65422233333332 22345544 5789999999
Q ss_pred CCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHH
Q 027408 100 TPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACS 143 (223)
Q Consensus 100 ~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~ 143 (223)
+|.. .+..++ ++....++++++||++..|=- .++.+.+.+.
T Consensus 94 vk~~-~~~~~l-~~l~~~l~~~~~iv~~~nGi~-~~~~l~~~~~ 134 (318)
T 3hwr_A 94 VKST-DTQSAA-LAMKPALAKSALVLSLQNGVE-NADTLRSLLE 134 (318)
T ss_dssp CCGG-GHHHHH-HHHTTTSCTTCEEEEECSSSS-HHHHHHHHCC
T ss_pred cccc-cHHHHH-HHHHHhcCCCCEEEEeCCCCC-cHHHHHHHcC
Confidence 9944 333332 455567788999999877632 2345555554
No 155
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=98.58 E-value=1.6e-07 Score=79.14 Aligned_cols=82 Identities=20% Similarity=0.271 Sum_probs=68.2
Q ss_pred ccCCCCCEEEEEcccHH-HHHHHHHHccC--CCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhh
Q 027408 31 AYDLEGKTVGTVGCGRI-GKLLLQRLKPF--NCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTR 107 (223)
Q Consensus 31 ~~~l~g~~igIiG~G~i-G~~iA~~l~~~--G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~ 107 (223)
+.++.|+++.|||.|.| |+.+|+.|... |++|++++++. .++.+.+++||+|+.+++. .
T Consensus 153 ~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t--------------~~L~~~~~~ADIVI~Avg~----p 214 (281)
T 2c2x_A 153 DISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT--------------RDLPALTRQADIVVAAVGV----A 214 (281)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC--------------SCHHHHHTTCSEEEECSCC----T
T ss_pred CCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch--------------hHHHHHHhhCCEEEECCCC----C
Confidence 45899999999999985 99999999998 89999998643 4789999999999999982 2
Q ss_pred hcccHHHHhcCCCCcEEEEcCCCCcc
Q 027408 108 GMFDKDRIAKMKKGVLIVNNARGAIM 133 (223)
Q Consensus 108 ~~i~~~~~~~mk~ga~ivn~srg~~v 133 (223)
+++..+. +|+|+++||++...+.
T Consensus 215 ~~I~~~~---vk~GavVIDVgi~r~~ 237 (281)
T 2c2x_A 215 HLLTADM---VRPGAAVIDVGVSRTD 237 (281)
T ss_dssp TCBCGGG---SCTTCEEEECCEEEET
T ss_pred cccCHHH---cCCCcEEEEccCCCCC
Confidence 3566555 5899999999976643
No 156
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=98.57 E-value=1.1e-07 Score=80.35 Aligned_cols=81 Identities=17% Similarity=0.352 Sum_probs=68.1
Q ss_pred ccCCCCCEEEEEcccH-HHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhc
Q 027408 31 AYDLEGKTVGTVGCGR-IGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGM 109 (223)
Q Consensus 31 ~~~l~g~~igIiG~G~-iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~ 109 (223)
+.++.|+++.|||.|. +|+.+|+.|...|++|++++++. .++.+.+++||+|+.+++. .++
T Consensus 154 ~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t--------------~~L~~~~~~ADIVI~Avg~----p~l 215 (288)
T 1b0a_A 154 NIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT--------------KNLRHHVENADLLIVAVGK----PGF 215 (288)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC--------------SCHHHHHHHCSEEEECSCC----TTC
T ss_pred CCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc--------------hhHHHHhccCCEEEECCCC----cCc
Confidence 4589999999999997 59999999999999999998543 4788999999999999982 235
Q ss_pred ccHHHHhcCCCCcEEEEcCCCCc
Q 027408 110 FDKDRIAKMKKGVLIVNNARGAI 132 (223)
Q Consensus 110 i~~~~~~~mk~ga~ivn~srg~~ 132 (223)
+..+. +|+|+++||++...+
T Consensus 216 I~~~~---vk~GavVIDVgi~r~ 235 (288)
T 1b0a_A 216 IPGDW---IKEGAIVIDVGINRL 235 (288)
T ss_dssp BCTTT---SCTTCEEEECCCEEC
T ss_pred CCHHH---cCCCcEEEEccCCcc
Confidence 66555 589999999997664
No 157
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=98.57 E-value=1.4e-07 Score=79.55 Aligned_cols=80 Identities=23% Similarity=0.322 Sum_probs=67.0
Q ss_pred ccCCCCCEEEEEcccH-HHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhc
Q 027408 31 AYDLEGKTVGTVGCGR-IGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGM 109 (223)
Q Consensus 31 ~~~l~g~~igIiG~G~-iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~ 109 (223)
+.++.|+++.|||.|. +|+.+|..|...|+.|++++++. .++++.+++||+|+.+++. .++
T Consensus 156 ~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t--------------~~L~~~~~~ADIVI~Avg~----p~~ 217 (285)
T 3l07_A 156 GIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT--------------TDLKSHTTKADILIVAVGK----PNF 217 (285)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------SSHHHHHTTCSEEEECCCC----TTC
T ss_pred CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc--------------hhHHHhcccCCEEEECCCC----CCC
Confidence 4579999999999988 69999999999999999998642 3788999999999999982 334
Q ss_pred ccHHHHhcCCCCcEEEEcCCCC
Q 027408 110 FDKDRIAKMKKGVLIVNNARGA 131 (223)
Q Consensus 110 i~~~~~~~mk~ga~ivn~srg~ 131 (223)
+..+ .+|+|+++||++...
T Consensus 218 I~~~---~vk~GavVIDvgi~~ 236 (285)
T 3l07_A 218 ITAD---MVKEGAVVIDVGINH 236 (285)
T ss_dssp BCGG---GSCTTCEEEECCCEE
T ss_pred CCHH---HcCCCcEEEEecccC
Confidence 6554 459999999998765
No 158
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=98.57 E-value=1.9e-07 Score=79.33 Aligned_cols=82 Identities=21% Similarity=0.270 Sum_probs=67.8
Q ss_pred ccCCCCCEEEEEcccH-HHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhc
Q 027408 31 AYDLEGKTVGTVGCGR-IGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGM 109 (223)
Q Consensus 31 ~~~l~g~~igIiG~G~-iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~ 109 (223)
+.++.|+++.|||.|. +|+.+|+.|...|++|++++++. .++.+.+++||+||.+++. .++
T Consensus 160 ~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t--------------~~L~~~~~~ADIVI~Avg~----p~~ 221 (301)
T 1a4i_A 160 GVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT--------------AHLDEEVNKGDILVVATGQ----PEM 221 (301)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------SSHHHHHTTCSEEEECCCC----TTC
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCc--------------ccHHHHhccCCEEEECCCC----ccc
Confidence 4589999999999996 69999999999999999998532 4789999999999999983 235
Q ss_pred ccHHHHhcCCCCcEEEEcCCCCcc
Q 027408 110 FDKDRIAKMKKGVLIVNNARGAIM 133 (223)
Q Consensus 110 i~~~~~~~mk~ga~ivn~srg~~v 133 (223)
+..+. +|+|+++||++...+-
T Consensus 222 I~~~~---vk~GavVIDVgi~~~~ 242 (301)
T 1a4i_A 222 VKGEW---IKPGAIVIDCGINYVP 242 (301)
T ss_dssp BCGGG---SCTTCEEEECCCBC--
T ss_pred CCHHH---cCCCcEEEEccCCCcc
Confidence 66555 5899999999987643
No 159
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=98.57 E-value=1.3e-07 Score=79.77 Aligned_cols=81 Identities=21% Similarity=0.362 Sum_probs=67.9
Q ss_pred ccCCCCCEEEEEcccH-HHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhc
Q 027408 31 AYDLEGKTVGTVGCGR-IGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGM 109 (223)
Q Consensus 31 ~~~l~g~~igIiG~G~-iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~ 109 (223)
+.++.|+++.|||.|. +|+.+|..|...|+.|++++++. .++++.+++||+|+.+++. .++
T Consensus 155 ~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t--------------~~L~~~~~~ADIVI~Avg~----p~~ 216 (285)
T 3p2o_A 155 EIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT--------------KDLSLYTRQADLIIVAAGC----VNL 216 (285)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------SCHHHHHTTCSEEEECSSC----TTC
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc--------------hhHHHHhhcCCEEEECCCC----CCc
Confidence 4689999999999988 69999999999999999998642 3788999999999999982 335
Q ss_pred ccHHHHhcCCCCcEEEEcCCCCc
Q 027408 110 FDKDRIAKMKKGVLIVNNARGAI 132 (223)
Q Consensus 110 i~~~~~~~mk~ga~ivn~srg~~ 132 (223)
+..+ .+|+|+++||++.-.+
T Consensus 217 I~~~---~vk~GavVIDVgi~~~ 236 (285)
T 3p2o_A 217 LRSD---MVKEGVIVVDVGINRL 236 (285)
T ss_dssp BCGG---GSCTTEEEEECCCEEC
T ss_pred CCHH---HcCCCeEEEEeccCcc
Confidence 6554 4599999999997664
No 160
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=98.56 E-value=1.7e-07 Score=79.05 Aligned_cols=81 Identities=22% Similarity=0.388 Sum_probs=67.5
Q ss_pred ccCCCCCEEEEEcccH-HHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhc
Q 027408 31 AYDLEGKTVGTVGCGR-IGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGM 109 (223)
Q Consensus 31 ~~~l~g~~igIiG~G~-iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~ 109 (223)
+.++.|+++.|||.|. +|+.+|..|...|+.|+++++.. .++++.+++||+|+.+++. .++
T Consensus 156 ~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T--------------~~L~~~~~~ADIVI~Avg~----p~~ 217 (286)
T 4a5o_A 156 GADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT--------------RDLADHVSRADLVVVAAGK----PGL 217 (286)
T ss_dssp TCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC--------------SCHHHHHHTCSEEEECCCC----TTC
T ss_pred CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC--------------cCHHHHhccCCEEEECCCC----CCC
Confidence 4689999999999987 79999999999999999997632 3688999999999999982 335
Q ss_pred ccHHHHhcCCCCcEEEEcCCCCc
Q 027408 110 FDKDRIAKMKKGVLIVNNARGAI 132 (223)
Q Consensus 110 i~~~~~~~mk~ga~ivn~srg~~ 132 (223)
+..+. +|+|+++||++.-.+
T Consensus 218 I~~~~---vk~GavVIDvgi~~~ 237 (286)
T 4a5o_A 218 VKGEW---IKEGAIVIDVGINRQ 237 (286)
T ss_dssp BCGGG---SCTTCEEEECCSCSS
T ss_pred CCHHH---cCCCeEEEEeccccc
Confidence 65544 599999999987654
No 161
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.55 E-value=9.5e-08 Score=68.96 Aligned_cols=89 Identities=18% Similarity=0.190 Sum_probs=59.6
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCC-CeEEEEcCCCCChhHHHhhCCee----c---CCHHhhcccCCEEEEcCCCChhh
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFN-CNLLYHDRVKMDPQLEKETGAKF----E---EDLDTMLPKCDIVVVNTPLTEKT 106 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G-~~V~~~d~~~~~~~~~~~~g~~~----~---~~l~e~l~~aDvVv~~~p~~~~t 106 (223)
.+++|+|+|.|.||+.+++.|...| .+|+++++++...+.....++.. . .++.++++++|+|+.++|....
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~~~- 82 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFFLT- 82 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGGGH-
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCchhh-
Confidence 4679999999999999999999999 89999999753333333334321 1 3455678899999999983221
Q ss_pred hhcccHHHHhcCCCCcEEEEcC
Q 027408 107 RGMFDKDRIAKMKKGVLIVNNA 128 (223)
Q Consensus 107 ~~~i~~~~~~~mk~ga~ivn~s 128 (223)
..+ .-...+.|...++.+
T Consensus 83 ~~~----~~~~~~~g~~~~~~~ 100 (118)
T 3ic5_A 83 PII----AKAAKAAGAHYFDLT 100 (118)
T ss_dssp HHH----HHHHHHTTCEEECCC
T ss_pred HHH----HHHHHHhCCCEEEec
Confidence 111 111234566677665
No 162
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=98.55 E-value=1.3e-07 Score=79.40 Aligned_cols=77 Identities=19% Similarity=0.270 Sum_probs=65.4
Q ss_pred CCCCEEEEEcccH-HHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhcccH
Q 027408 34 LEGKTVGTVGCGR-IGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDK 112 (223)
Q Consensus 34 l~g~~igIiG~G~-iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~ 112 (223)
+.|+++.|||.|. +|+.+|..|...|++|++++++. .++++.+++||+|+.+++. .+++..
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t--------------~~L~~~~~~ADIVI~Avg~----p~~I~~ 209 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT--------------KDIGSMTRSSKIVVVAVGR----PGFLNR 209 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------SCHHHHHHHSSEEEECSSC----TTCBCG
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc--------------ccHHHhhccCCEEEECCCC----CccccH
Confidence 9999999999986 89999999999999999998632 4788999999999999983 235655
Q ss_pred HHHhcCCCCcEEEEcCCCC
Q 027408 113 DRIAKMKKGVLIVNNARGA 131 (223)
Q Consensus 113 ~~~~~mk~ga~ivn~srg~ 131 (223)
+. +|+|+++||++.-.
T Consensus 210 ~~---vk~GavVIDvgi~~ 225 (276)
T 3ngx_A 210 EM---VTPGSVVIDVGINY 225 (276)
T ss_dssp GG---CCTTCEEEECCCEE
T ss_pred hh---ccCCcEEEEeccCc
Confidence 44 59999999998755
No 163
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=98.54 E-value=1.6e-07 Score=81.80 Aligned_cols=93 Identities=10% Similarity=0.150 Sum_probs=68.9
Q ss_pred CCCCEEEEEcccHHHHHHHHHHc-cCC-CeEEEEcCCCCCh-hHHHhh----C--CeecCCHHhhcccCCEEEEcCCCCh
Q 027408 34 LEGKTVGTVGCGRIGKLLLQRLK-PFN-CNLLYHDRVKMDP-QLEKET----G--AKFEEDLDTMLPKCDIVVVNTPLTE 104 (223)
Q Consensus 34 l~g~~igIiG~G~iG~~iA~~l~-~~G-~~V~~~d~~~~~~-~~~~~~----g--~~~~~~l~e~l~~aDvVv~~~p~~~ 104 (223)
...++|+|||+|.+|+.+++.+. ..+ .+|.+|||++... +..+.+ + +..+++++++++++|+|++|+|...
T Consensus 127 ~~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav~~aDiVi~aTps~~ 206 (350)
T 1x7d_A 127 PNARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADKA 206 (350)
T ss_dssp TTCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCCSS
T ss_pred ccCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHHHHHhcCCEEEEeccCCC
Confidence 36789999999999999998874 344 5799999986332 333333 5 3456789999999999999999652
Q ss_pred hhhhcccHHHHhcCCCCcEEEEcCCC
Q 027408 105 KTRGMFDKDRIAKMKKGVLIVNNARG 130 (223)
Q Consensus 105 ~t~~~i~~~~~~~mk~ga~ivn~srg 130 (223)
...++.. +.+++|+.+++++..
T Consensus 207 -~~pvl~~---~~l~~G~~V~~vgs~ 228 (350)
T 1x7d_A 207 -YATIITP---DMLEPGMHLNAVGGD 228 (350)
T ss_dssp -EEEEECG---GGCCTTCEEEECSCC
T ss_pred -CCceecH---HHcCCCCEEEECCCC
Confidence 2334442 568999999999863
No 164
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=98.54 E-value=1.2e-07 Score=80.62 Aligned_cols=81 Identities=19% Similarity=0.266 Sum_probs=66.4
Q ss_pred ccCCCCCEEEEEcccH-HHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHH--hhcccCCEEEEcCCCChhhh
Q 027408 31 AYDLEGKTVGTVGCGR-IGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLD--TMLPKCDIVVVNTPLTEKTR 107 (223)
Q Consensus 31 ~~~l~g~~igIiG~G~-iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~--e~l~~aDvVv~~~p~~~~t~ 107 (223)
+.++.|+++.|||.|. +|+.+|..|...|+.|++++++.. +++ +.+++||+|+.+++. .
T Consensus 160 ~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~--------------~l~l~~~~~~ADIVI~Avg~----p 221 (300)
T 4a26_A 160 GIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS--------------TEDMIDYLRTADIVIAAMGQ----P 221 (300)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC--------------HHHHHHHHHTCSEEEECSCC----T
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC--------------CchhhhhhccCCEEEECCCC----C
Confidence 4679999999999988 799999999999999999987431 345 889999999999983 3
Q ss_pred hcccHHHHhcCCCCcEEEEcCCCCc
Q 027408 108 GMFDKDRIAKMKKGVLIVNNARGAI 132 (223)
Q Consensus 108 ~~i~~~~~~~mk~ga~ivn~srg~~ 132 (223)
+++..+. +|+|+++||++...+
T Consensus 222 ~~I~~~~---vk~GavVIDvgi~~~ 243 (300)
T 4a26_A 222 GYVKGEW---IKEGAAVVDVGTTPV 243 (300)
T ss_dssp TCBCGGG---SCTTCEEEECCCEEE
T ss_pred CCCcHHh---cCCCcEEEEEeccCC
Confidence 3565543 699999999986543
No 165
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.53 E-value=5e-07 Score=67.07 Aligned_cols=90 Identities=18% Similarity=0.105 Sum_probs=59.7
Q ss_pred CCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHH-hhCCee----cCCHHh----hcccCCEEEEcCCCChhh
Q 027408 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEK-ETGAKF----EEDLDT----MLPKCDIVVVNTPLTEKT 106 (223)
Q Consensus 36 g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~-~~g~~~----~~~l~e----~l~~aDvVv~~~p~~~~t 106 (223)
+++|+|+|+|.+|+.+|+.|...|.+|.++|+++...+... ..++.. ..+.+. .+.++|+|++++|.....
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~~ 83 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEVN 83 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCchHH
Confidence 57899999999999999999999999999998653222222 235432 122322 257899999999854332
Q ss_pred hhcccHHHHhcCCCCcEEEEc
Q 027408 107 RGMFDKDRIAKMKKGVLIVNN 127 (223)
Q Consensus 107 ~~~i~~~~~~~mk~ga~ivn~ 127 (223)
. .-....+.++++.+++-+
T Consensus 84 ~--~~~~~~~~~~~~~ii~~~ 102 (140)
T 1lss_A 84 L--MSSLLAKSYGINKTIARI 102 (140)
T ss_dssp H--HHHHHHHHTTCCCEEEEC
T ss_pred H--HHHHHHHHcCCCEEEEEe
Confidence 2 223455667777666543
No 166
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=98.52 E-value=2.6e-07 Score=78.50 Aligned_cols=108 Identities=11% Similarity=0.218 Sum_probs=72.4
Q ss_pred CCEEEEEcccHHHHH-HHHHHcc-CCCeEE-EEcCCCCC-hhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhccc
Q 027408 36 GKTVGTVGCGRIGKL-LLQRLKP-FNCNLL-YHDRVKMD-PQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 111 (223)
Q Consensus 36 g~~igIiG~G~iG~~-iA~~l~~-~G~~V~-~~d~~~~~-~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~ 111 (223)
-.+|||||+|.||+. +++.++. -+.++. ++|+++.. .+.++.+++..++++++++.++|+|++++|.....
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~ll~~~D~V~i~tp~~~h~----- 80 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDYRIMPFDSIESLAKKCDCIFLHSSTETHY----- 80 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHHTCCBCSCHHHHHTTCSEEEECCCGGGHH-----
T ss_pred cCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHHhcCCEEEEeCCcHhHH-----
Confidence 468999999999996 8888876 477866 78987532 23455678776889999999999999999933222
Q ss_pred HHHHhcCCCCcEEEEc--CCCCccCHHHHHHHHHhCCcc
Q 027408 112 KDRIAKMKKGVLIVNN--ARGAIMDTQAVVDACSSGHIA 148 (223)
Q Consensus 112 ~~~~~~mk~ga~ivn~--srg~~vd~~al~~~L~~g~i~ 148 (223)
+-....++.|..++.- ..-.+-+.++|.++.++..+.
T Consensus 81 ~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~g~~ 119 (308)
T 3uuw_A 81 EIIKILLNLGVHVYVDKPLASTVSQGEELIELSTKKNLN 119 (308)
T ss_dssp HHHHHHHHTTCEEEECSSSSSSHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHcCCE
Confidence 2233445556555421 222333455567766665544
No 167
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=98.51 E-value=3.9e-08 Score=84.56 Aligned_cols=94 Identities=18% Similarity=0.172 Sum_probs=68.4
Q ss_pred ccCCCCCEEEEEcccHH-HHHHHHHHccCCCeEEEEcCCCC-ChhHHHhhCC--e-e-----c--CCHHhhcccCCEEEE
Q 027408 31 AYDLEGKTVGTVGCGRI-GKLLLQRLKPFNCNLLYHDRVKM-DPQLEKETGA--K-F-----E--EDLDTMLPKCDIVVV 98 (223)
Q Consensus 31 ~~~l~g~~igIiG~G~i-G~~iA~~l~~~G~~V~~~d~~~~-~~~~~~~~g~--~-~-----~--~~l~e~l~~aDvVv~ 98 (223)
+.++.|+++.|||.|.| |+.+|+.|...|++|+++||+.. ..+.+..++. . . . .++++.+++||+|+.
T Consensus 172 g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVIs 251 (320)
T 1edz_A 172 GNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVIT 251 (320)
T ss_dssp TCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEE
T ss_pred CCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEEE
Confidence 45799999999999975 99999999999999999998621 0011111111 1 1 1 478899999999999
Q ss_pred cCCCChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 027408 99 NTPLTEKTRGMFDKDRIAKMKKGVLIVNNARG 130 (223)
Q Consensus 99 ~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg 130 (223)
+++.. ..++..+. +|+|+++||++..
T Consensus 252 Atg~p---~~vI~~e~---vk~GavVIDVgi~ 277 (320)
T 1edz_A 252 GVPSE---NYKFPTEY---IKEGAVCINFACT 277 (320)
T ss_dssp CCCCT---TCCBCTTT---SCTTEEEEECSSS
T ss_pred CCCCC---cceeCHHH---cCCCeEEEEcCCC
Confidence 99831 22365555 5899999999864
No 168
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=98.49 E-value=2.8e-07 Score=69.52 Aligned_cols=89 Identities=16% Similarity=0.211 Sum_probs=61.7
Q ss_pred CEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeec----CCHH---hh-cccCCEEEEcCCCChhhhh
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE----EDLD---TM-LPKCDIVVVNTPLTEKTRG 108 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~----~~l~---e~-l~~aDvVv~~~p~~~~t~~ 108 (223)
.+|.|+|+|.+|+.+|+.|+..|++|+++|+++...+.....|+..+ .+.+ ++ +.++|+|++++|....+..
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~~n~~ 87 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAGE 87 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChHHHHH
Confidence 46999999999999999999999999999997644444445565422 2222 21 4689999999996655543
Q ss_pred cccHHHHhcCCCCcEEEEc
Q 027408 109 MFDKDRIAKMKKGVLIVNN 127 (223)
Q Consensus 109 ~i~~~~~~~mk~ga~ivn~ 127 (223)
+ ....+.+.++..+|-.
T Consensus 88 ~--~~~a~~~~~~~~iiar 104 (140)
T 3fwz_A 88 I--VASARAKNPDIEIIAR 104 (140)
T ss_dssp H--HHHHHHHCSSSEEEEE
T ss_pred H--HHHHHHHCCCCeEEEE
Confidence 3 2345555566555543
No 169
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=98.46 E-value=4e-07 Score=78.93 Aligned_cols=68 Identities=15% Similarity=0.301 Sum_probs=54.7
Q ss_pred CEEEEEcccHHHHHHHHHHccC-CCeEE-EEcCCCCC-hhHHHhhCCeecCCHHhhc--ccCCEEEEcCCCCh
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPF-NCNLL-YHDRVKMD-PQLEKETGAKFEEDLDTML--PKCDIVVVNTPLTE 104 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~-G~~V~-~~d~~~~~-~~~~~~~g~~~~~~l~e~l--~~aDvVv~~~p~~~ 104 (223)
.+|||||+|.||+.+++.++.. ++++. ++|+++.. .+.++.+++..++++++++ .+.|+|++++|...
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~ 78 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAGDATMEALLAREDVEMVIITVPNDK 78 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCCCSSHHHHHHCSSCCEEEECSCTTS
T ss_pred ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEEeCChHH
Confidence 5899999999999999999877 78855 78987532 2344567887788999999 66999999999543
No 170
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=98.45 E-value=2e-07 Score=81.67 Aligned_cols=109 Identities=17% Similarity=0.114 Sum_probs=72.7
Q ss_pred CCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHH-HhhC-----CeecCCHHhhcccCCEEEEcCCCChhh
Q 027408 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLE-KETG-----AKFEEDLDTMLPKCDIVVVNTPLTEKT 106 (223)
Q Consensus 33 ~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~-~~~g-----~~~~~~l~e~l~~aDvVv~~~p~~~~t 106 (223)
+=++++|+|+|+|.||+.+|+.|... .+|.++||+....+.. ...+ +....+++++++++|+|+.|+|.....
T Consensus 13 ~~~~~~v~IiGaG~iG~~ia~~L~~~-~~V~V~~R~~~~a~~la~~~~~~~~d~~~~~~l~~ll~~~DvVIn~~P~~~~~ 91 (365)
T 2z2v_A 13 EGRHMKVLILGAGNIGRAIAWDLKDE-FDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFLGF 91 (365)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHTTT-SEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSCEEECCCHHHHH
T ss_pred cCCCCeEEEEcCCHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHhhCCeEEEecCCHHHHHHHHhCCCEEEECCChhhhH
Confidence 45789999999999999999999877 8999999975322222 1111 111245778899999999999832211
Q ss_pred hhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCcc
Q 027408 107 RGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (223)
Q Consensus 107 ~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~ 148 (223)
.-....++.|..+++++-- .-+..+|.+..++..+.
T Consensus 92 -----~v~~a~l~~G~~~vD~s~~-~~~~~~l~~~Ak~aG~~ 127 (365)
T 2z2v_A 92 -----KSIKAAIKSKVDMVDVSFM-PENPLELRDEAEKAQVT 127 (365)
T ss_dssp -----HHHHHHHHTTCCEEECCCC-SSCGGGGHHHHHHTTCE
T ss_pred -----HHHHHHHHhCCeEEEccCC-cHHHHHHHHHHHHcCCE
Confidence 2233456788999998852 33445666666665554
No 171
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=98.45 E-value=4.9e-07 Score=77.58 Aligned_cols=106 Identities=19% Similarity=0.234 Sum_probs=69.4
Q ss_pred CEEEEEcccHHHHHHHHHHccC-CCeEE-EEcCCCCC-hhHHHhhCCeecCCHHhhcc--cCCEEEEcCCCChhhhhccc
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPF-NCNLL-YHDRVKMD-PQLEKETGAKFEEDLDTMLP--KCDIVVVNTPLTEKTRGMFD 111 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~-G~~V~-~~d~~~~~-~~~~~~~g~~~~~~l~e~l~--~aDvVv~~~p~~~~t~~~i~ 111 (223)
.+|||||+|.||+.+++.+... ++++. ++|+++.. .+.++.+++. +++++++++ ++|+|++++|.....
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~D~V~i~tp~~~h~----- 77 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE-VRTIDAIEAAADIDAVVICTPTDTHA----- 77 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE-ECCHHHHHHCTTCCEEEECSCGGGHH-----
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC-cCCHHHHhcCCCCCEEEEeCCchhHH-----
Confidence 4899999999999999999875 77866 78987532 3345567887 789999997 799999999943322
Q ss_pred HHHHhcCCCCcEEEEcC--CCCccCHHHHHHHHHhCCcc
Q 027408 112 KDRIAKMKKGVLIVNNA--RGAIMDTQAVVDACSSGHIA 148 (223)
Q Consensus 112 ~~~~~~mk~ga~ivn~s--rg~~vd~~al~~~L~~g~i~ 148 (223)
+.....++.|..++.-- .-..-+.+.|.++.++..+.
T Consensus 78 ~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~ 116 (331)
T 4hkt_A 78 DLIERFARAGKAIFCEKPIDLDAERVRACLKVVSDTKAK 116 (331)
T ss_dssp HHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHcCCe
Confidence 22233344454444321 12223344455555555444
No 172
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=98.44 E-value=3.6e-07 Score=80.61 Aligned_cols=89 Identities=13% Similarity=0.080 Sum_probs=62.4
Q ss_pred CEEEEEcccHHHHHHHHHHcc-CCCeEEEEc---CCCCChhH-HHhhC------------C-------eecCCHHhhccc
Q 027408 37 KTVGTVGCGRIGKLLLQRLKP-FNCNLLYHD---RVKMDPQL-EKETG------------A-------KFEEDLDTMLPK 92 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~-~G~~V~~~d---~~~~~~~~-~~~~g------------~-------~~~~~l~e~l~~ 92 (223)
++|+|||.|.||..+|..|.. .|.+|.+|+ +++...+. .+..+ . ...++++++++.
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 82 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAISG 82 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHHHTT
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHHhCC
Confidence 589999999999999999977 599999999 43211111 12111 1 133578888899
Q ss_pred CCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEc
Q 027408 93 CDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNN 127 (223)
Q Consensus 93 aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~ 127 (223)
+|+|++++|... ...+ -++....++++++|++.
T Consensus 83 aD~Vilav~~~~-~~~v-~~~l~~~l~~~~ivv~~ 115 (404)
T 3c7a_A 83 ADVVILTVPAFA-HEGY-FQAMAPYVQDSALIVGL 115 (404)
T ss_dssp CSEEEECSCGGG-HHHH-HHHHTTTCCTTCEEEET
T ss_pred CCEEEEeCchHH-HHHH-HHHHHhhCCCCcEEEEc
Confidence 999999999433 2222 24555667889999985
No 173
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=98.43 E-value=5.1e-07 Score=77.91 Aligned_cols=67 Identities=21% Similarity=0.362 Sum_probs=54.0
Q ss_pred CEEEEEcccHHHHHHHHHHccC-CCeEE-EEcCCCCC-hhHHHhhCCeecCCHHhhcc--cCCEEEEcCCCC
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPF-NCNLL-YHDRVKMD-PQLEKETGAKFEEDLDTMLP--KCDIVVVNTPLT 103 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~-G~~V~-~~d~~~~~-~~~~~~~g~~~~~~l~e~l~--~aDvVv~~~p~~ 103 (223)
.+|||||+|.||+.+++.++.. ++++. ++|+++.. .+.++.++...+.++++++. ++|+|++++|..
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~ 76 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAEAVASPDEVFARDDIDGIVIGSPTS 76 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCEEESSHHHHTTCSCCCEEEECSCGG
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEEeCCch
Confidence 4899999999999999999876 67765 78887532 23355667777889999998 899999999943
No 174
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=98.42 E-value=3.3e-07 Score=68.28 Aligned_cols=96 Identities=13% Similarity=0.187 Sum_probs=59.4
Q ss_pred CCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCee----cCCHH---hh-cccCCEEEEcCCCCh
Q 027408 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKF----EEDLD---TM-LPKCDIVVVNTPLTE 104 (223)
Q Consensus 33 ~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~----~~~l~---e~-l~~aDvVv~~~p~~~ 104 (223)
.+.+++|.|+|+|.+|+.+++.|...|++|+++|+++...+.....+... ..+.+ ++ +.++|+|+.+++...
T Consensus 3 ~~~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~ 82 (144)
T 2hmt_A 3 RIKNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANI 82 (144)
T ss_dssp ---CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSCH
T ss_pred CCcCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCch
Confidence 35678899999999999999999999999999998642222222223321 12222 32 568999999998642
Q ss_pred hhhhcccHHHHhcCCCCcEEEEcCCC
Q 027408 105 KTRGMFDKDRIAKMKKGVLIVNNARG 130 (223)
Q Consensus 105 ~t~~~i~~~~~~~mk~ga~ivn~srg 130 (223)
+.. ..-....+.+.+. .++..+.+
T Consensus 83 ~~~-~~~~~~~~~~~~~-~ii~~~~~ 106 (144)
T 2hmt_A 83 QAS-TLTTLLLKELDIP-NIWVKAQN 106 (144)
T ss_dssp HHH-HHHHHHHHHTTCS-EEEEECCS
T ss_pred HHH-HHHHHHHHHcCCC-eEEEEeCC
Confidence 221 1223444556665 45544443
No 175
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=98.42 E-value=7.1e-07 Score=76.83 Aligned_cols=87 Identities=18% Similarity=0.327 Sum_probs=65.4
Q ss_pred CCCEEEEEcccHHHHHHHHHHcc-CC-CeEEEEcCCCCCh-hHHHhh-----CCeecCCHHhhcccCCEEEEcCCCChhh
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKP-FN-CNLLYHDRVKMDP-QLEKET-----GAKFEEDLDTMLPKCDIVVVNTPLTEKT 106 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~-~G-~~V~~~d~~~~~~-~~~~~~-----g~~~~~~l~e~l~~aDvVv~~~p~~~~t 106 (223)
..++++|||+|.+|+.+++.+.. .+ .+|.+|||++... +.++.+ .+. +.++++++ ++|+|++|+|...
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~~~~~-~~~~~e~v-~aDvVi~aTp~~~-- 199 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISAS-VQPAEEAS-RCDVLVTTTPSRK-- 199 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEE-ECCHHHHT-SSSEEEECCCCSS--
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcCceEE-ECCHHHHh-CCCEEEEeeCCCC--
Confidence 57899999999999999998875 44 5699999986332 233332 244 67899999 9999999999542
Q ss_pred hhcccHHHHhcCCCCcEEEEcCC
Q 027408 107 RGMFDKDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 107 ~~~i~~~~~~~mk~ga~ivn~sr 129 (223)
.++.. +.+++|+.+++++.
T Consensus 200 -pv~~~---~~l~~G~~V~~ig~ 218 (322)
T 1omo_A 200 -PVVKA---EWVEEGTHINAIGA 218 (322)
T ss_dssp -CCBCG---GGCCTTCEEEECSC
T ss_pred -ceecH---HHcCCCeEEEECCC
Confidence 34432 56899999999953
No 176
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=98.42 E-value=4.1e-07 Score=78.89 Aligned_cols=67 Identities=30% Similarity=0.422 Sum_probs=54.4
Q ss_pred CCEEEEEcccHHHHHHHHHHccC--CCeEE-EEcCCCCC-hhHHHhhCCeecCCHHhhcc--cCCEEEEcCCC
Q 027408 36 GKTVGTVGCGRIGKLLLQRLKPF--NCNLL-YHDRVKMD-PQLEKETGAKFEEDLDTMLP--KCDIVVVNTPL 102 (223)
Q Consensus 36 g~~igIiG~G~iG~~iA~~l~~~--G~~V~-~~d~~~~~-~~~~~~~g~~~~~~l~e~l~--~aDvVv~~~p~ 102 (223)
-.+|||||+|.||+.+++.++.. ++++. ++|+++.. .+.++.+++..+++++++++ ++|+|++|+|.
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~ 85 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGARGHASLTDMLAQTDADIVILTTPS 85 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCCEEESCHHHHHHHCCCSEEEECSCG
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEECCCc
Confidence 35899999999999999999876 77855 88987532 23455678887889999996 79999999993
No 177
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=98.41 E-value=5.3e-07 Score=78.51 Aligned_cols=66 Identities=23% Similarity=0.316 Sum_probs=54.4
Q ss_pred CEEEEEcccHHHHHHHHHHccC-CCeEE-EEcCCCCChhHHHhhCCeecCCHHhhcc--cCCEEEEcCCC
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPF-NCNLL-YHDRVKMDPQLEKETGAKFEEDLDTMLP--KCDIVVVNTPL 102 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~g~~~~~~l~e~l~--~aDvVv~~~p~ 102 (223)
.+|||||+|.||+..++.++.. ++++. ++|+++...+.++..++..++++++++. +.|+|++|+|.
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~ 75 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKIYESYEAVLADEKVDAVLIATPN 75 (359)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCBCSCHHHHHHCTTCCEEEECSCG
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCceeCCHHHHhcCCCCCEEEEcCCc
Confidence 5899999999999999999876 77865 6788764444556678887889999997 78999999994
No 178
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=98.40 E-value=1.3e-06 Score=74.56 Aligned_cols=107 Identities=17% Similarity=0.283 Sum_probs=72.2
Q ss_pred CEEEEEcccHHHHH-HHHHHcc-CCCeEE-EEcCCCCCh-hHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhcccH
Q 027408 37 KTVGTVGCGRIGKL-LLQRLKP-FNCNLL-YHDRVKMDP-QLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDK 112 (223)
Q Consensus 37 ~~igIiG~G~iG~~-iA~~l~~-~G~~V~-~~d~~~~~~-~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~ 112 (223)
.+|||||+|.||+. +++.+.. -++++. ++|+++... +.++.+++..+++++++..++|+|++++|..... +
T Consensus 6 ~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~l~~~~D~V~i~tp~~~h~-----~ 80 (319)
T 1tlt_A 6 LRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPYADSLSSLAASCDAVFVHSSTASHF-----D 80 (319)
T ss_dssp EEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCBCSSHHHHHTTCSEEEECSCTTHHH-----H
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCccCcHHHhhcCCCEEEEeCCchhHH-----H
Confidence 58999999999997 8888865 467765 889887444 3455567776778888767899999999943322 2
Q ss_pred HHHhcCCCCcE-EEEc-CCCCccCHHHHHHHHHhCCcc
Q 027408 113 DRIAKMKKGVL-IVNN-ARGAIMDTQAVVDACSSGHIA 148 (223)
Q Consensus 113 ~~~~~mk~ga~-ivn~-srg~~vd~~al~~~L~~g~i~ 148 (223)
.....++.|.. ++.- ....+-+.+.|.++.++..+.
T Consensus 81 ~~~~al~~G~~v~~eKP~~~~~~~~~~l~~~a~~~g~~ 118 (319)
T 1tlt_A 81 VVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKLT 118 (319)
T ss_dssp HHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCe
Confidence 33344556664 4432 222334555677777776655
No 179
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=98.38 E-value=3.4e-07 Score=77.47 Aligned_cols=96 Identities=16% Similarity=0.190 Sum_probs=64.6
Q ss_pred ccCCCCCEEEEEcccHHHHHHHHHHccCCC-eEEEEcCCCCC-hhHHHhhC----CeecCCHHhhcccCCEEEEcCCCCh
Q 027408 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMD-PQLEKETG----AKFEEDLDTMLPKCDIVVVNTPLTE 104 (223)
Q Consensus 31 ~~~l~g~~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~-~~~~~~~g----~~~~~~l~e~l~~aDvVv~~~p~~~ 104 (223)
+.++.|+++.|+|.|.+|++++..|...|+ +|.+++|+... .+.++.++ +.. .+++++..++|+||.++|...
T Consensus 121 ~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~-~~~~~l~~~aDiIInaTp~gm 199 (281)
T 3o8q_A 121 QVLLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKA-QAFEQLKQSYDVIINSTSASL 199 (281)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEE-EEGGGCCSCEEEEEECSCCCC
T ss_pred CCCccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeE-eeHHHhcCCCCEEEEcCcCCC
Confidence 456899999999999999999999999996 89999997532 22333332 222 256666688999999999543
Q ss_pred hhh-hcccHHHHhcCCCCcEEEEcCCC
Q 027408 105 KTR-GMFDKDRIAKMKKGVLIVNNARG 130 (223)
Q Consensus 105 ~t~-~~i~~~~~~~mk~ga~ivn~srg 130 (223)
... ..+. .+.++++.+++|+.-.
T Consensus 200 ~~~~~~l~---~~~l~~~~~V~DlvY~ 223 (281)
T 3o8q_A 200 DGELPAID---PVIFSSRSVCYDMMYG 223 (281)
T ss_dssp ----CSCC---GGGEEEEEEEEESCCC
T ss_pred CCCCCCCC---HHHhCcCCEEEEecCC
Confidence 211 1122 1334566666666543
No 180
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=98.37 E-value=7.2e-07 Score=76.43 Aligned_cols=105 Identities=10% Similarity=0.126 Sum_probs=68.6
Q ss_pred CCEEEEEcccHHHHHHHHHHccCCC-eEEEEcCCCCChhHH-----Hh-------hCCeecCCHHhhcccCCEEEEcCCC
Q 027408 36 GKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLE-----KE-------TGAKFEEDLDTMLPKCDIVVVNTPL 102 (223)
Q Consensus 36 g~~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~-----~~-------~g~~~~~~l~e~l~~aDvVv~~~p~ 102 (223)
.++|+|||.|.||..+|..+...|+ +|..||+++...+.. .. ..+....++ +.+++||+|+++++.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~~aDiVi~avg~ 82 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADISGSDVVIITASI 82 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCCC
Confidence 4689999999999999999988888 999999976332221 00 112333566 678999999999831
Q ss_pred Ch-----------hh---hhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHH
Q 027408 103 TE-----------KT---RGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDAC 142 (223)
Q Consensus 103 ~~-----------~t---~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L 142 (223)
.. .+ ..-+.++.-+. .+++++++++.+.-+....+.+..
T Consensus 83 p~~~g~~r~d~~~~~~~i~~~i~~~i~~~-~~~~iii~~sNp~~~~~~~~~~~~ 135 (317)
T 2ewd_A 83 PGRPKDDRSELLFGNARILDSVAEGVKKY-CPNAFVICITNPLDVMVSHFQKVS 135 (317)
T ss_dssp SSCCSSCGGGGHHHHHHHHHHHHHHHHHH-CTTSEEEECCSSHHHHHHHHHHHH
T ss_pred CCCCCCcHHHHHHhhHHHHHHHHHHHHHH-CCCcEEEEeCChHHHHHHHHHHhh
Confidence 11 11 11122233333 468999999876555455555544
No 181
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=98.37 E-value=2.6e-06 Score=74.72 Aligned_cols=97 Identities=22% Similarity=0.278 Sum_probs=77.1
Q ss_pred ccCCCCCEEEEEcccHHHHHHHHHHccCCC-eEEEEcCC----CCC---------hhHHHhhCC-eecCCHHhhcccCCE
Q 027408 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRV----KMD---------PQLEKETGA-KFEEDLDTMLPKCDI 95 (223)
Q Consensus 31 ~~~l~g~~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~----~~~---------~~~~~~~g~-~~~~~l~e~l~~aDv 95 (223)
+..+.+.+|.|+|.|.+|..+|+.+...|. +|+++|++ ... ...+++.+. ....+++|.++++|+
T Consensus 187 g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~ADV 266 (388)
T 1vl6_A 187 EKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEGADF 266 (388)
T ss_dssp TCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTTCSE
T ss_pred CCCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHccCCE
Confidence 447899999999999999999999999999 79999997 322 112222221 124579999999999
Q ss_pred EEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCc
Q 027408 96 VVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAI 132 (223)
Q Consensus 96 Vv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~ 132 (223)
++-+.. .+++.++.++.|+++.+|+.+|+...
T Consensus 267 lIG~Sa-----p~l~t~emVk~Ma~~pIIfalSNPt~ 298 (388)
T 1vl6_A 267 FIGVSR-----GNILKPEWIKKMSRKPVIFALANPVP 298 (388)
T ss_dssp EEECSC-----SSCSCHHHHTTSCSSCEEEECCSSSC
T ss_pred EEEeCC-----CCccCHHHHHhcCCCCEEEEcCCCCC
Confidence 887743 37899999999999999999998654
No 182
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=98.36 E-value=1e-06 Score=75.37 Aligned_cols=107 Identities=13% Similarity=0.213 Sum_probs=67.5
Q ss_pred CEEEEEcccHHHHHH-HHHHccCCCeEE-EEcCCCCCh-hHHHhhCCe-ecCCHHhhcc--cCCEEEEcCCCChhhhhcc
Q 027408 37 KTVGTVGCGRIGKLL-LQRLKPFNCNLL-YHDRVKMDP-QLEKETGAK-FEEDLDTMLP--KCDIVVVNTPLTEKTRGMF 110 (223)
Q Consensus 37 ~~igIiG~G~iG~~i-A~~l~~~G~~V~-~~d~~~~~~-~~~~~~g~~-~~~~l~e~l~--~aDvVv~~~p~~~~t~~~i 110 (223)
.+|||||+|.||+.+ ++.+...+.++. ++|+++... +.++++++. .+++++++++ ++|+|++++|....
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h----- 75 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSVTSVEELVGDPDVDAVYVSTTNELH----- 75 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCBSCHHHHHTCTTCCEEEECSCGGGH-----
T ss_pred CeEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChhHh-----
Confidence 379999999999998 777766778865 788875322 334556764 5678999986 59999999993222
Q ss_pred cHHHHhcCCCCcEEEEcC--CCCccCHHHHHHHHHhCCcc
Q 027408 111 DKDRIAKMKKGVLIVNNA--RGAIMDTQAVVDACSSGHIA 148 (223)
Q Consensus 111 ~~~~~~~mk~ga~ivn~s--rg~~vd~~al~~~L~~g~i~ 148 (223)
.+.....++.|..++.-. ....-+.+.|.++.++..+.
T Consensus 76 ~~~~~~al~~Gk~v~~ekP~~~~~~~~~~l~~~a~~~g~~ 115 (332)
T 2glx_A 76 REQTLAAIRAGKHVLCEKPLAMTLEDAREMVVAAREAGVV 115 (332)
T ss_dssp HHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCCE
Confidence 123334455666444321 12223334466555554443
No 183
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=98.36 E-value=8.6e-07 Score=76.89 Aligned_cols=69 Identities=22% Similarity=0.256 Sum_probs=54.2
Q ss_pred CCCEEEEEcccHHHH-HHHHHHccC-CCeEE-EEcCCCC-ChhHHHhhCCeecCCHHhhcc--cCCEEEEcCCCC
Q 027408 35 EGKTVGTVGCGRIGK-LLLQRLKPF-NCNLL-YHDRVKM-DPQLEKETGAKFEEDLDTMLP--KCDIVVVNTPLT 103 (223)
Q Consensus 35 ~g~~igIiG~G~iG~-~iA~~l~~~-G~~V~-~~d~~~~-~~~~~~~~g~~~~~~l~e~l~--~aDvVv~~~p~~ 103 (223)
.-.+|||||+|.||+ .++..++.. +++|. ++|+++. ..+.++.+++..+.+++++++ +.|+|++|+|..
T Consensus 26 ~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~ 100 (350)
T 3rc1_A 26 NPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPVEGYPALLERDDVDAVYVPLPAV 100 (350)
T ss_dssp CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEEESHHHHHTCTTCSEEEECCCGG
T ss_pred CceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEECCCcH
Confidence 346899999999998 788888776 77865 7888752 233456678877789999996 589999999943
No 184
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.36 E-value=8.4e-07 Score=66.53 Aligned_cols=90 Identities=17% Similarity=0.099 Sum_probs=57.9
Q ss_pred CCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCee----cCCHHhh----cccCCEEEEcCCCChh
Q 027408 34 LEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKF----EEDLDTM----LPKCDIVVVNTPLTEK 105 (223)
Q Consensus 34 l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~----~~~l~e~----l~~aDvVv~~~p~~~~ 105 (223)
..+++|.|+|+|.+|+.+|+.|...|.+|+++|+++...+.....+... ..+.+.+ +.++|+|++++|..+.
T Consensus 4 ~~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~~~ 83 (141)
T 3llv_A 4 NGRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDDEF 83 (141)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCHHH
Confidence 3467899999999999999999999999999999764333344445432 1222222 4679999999994333
Q ss_pred hhhcccHHHHhcCCCCcEEE
Q 027408 106 TRGMFDKDRIAKMKKGVLIV 125 (223)
Q Consensus 106 t~~~i~~~~~~~mk~ga~iv 125 (223)
+ +......+.+....+++
T Consensus 84 n--~~~~~~a~~~~~~~iia 101 (141)
T 3llv_A 84 N--LKILKALRSVSDVYAIV 101 (141)
T ss_dssp H--HHHHHHHHHHCCCCEEE
T ss_pred H--HHHHHHHHHhCCceEEE
Confidence 2 22234444454333443
No 185
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=98.35 E-value=1.3e-06 Score=74.77 Aligned_cols=107 Identities=11% Similarity=0.199 Sum_probs=66.4
Q ss_pred CEEEEEcccHHHHHHHHHHccC-CCeE-EEEcCCCCCh-hHHHhhCC-eecCCHHhhc-ccCCEEEEcCCCChhhhhccc
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPF-NCNL-LYHDRVKMDP-QLEKETGA-KFEEDLDTML-PKCDIVVVNTPLTEKTRGMFD 111 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~-G~~V-~~~d~~~~~~-~~~~~~g~-~~~~~l~e~l-~~aDvVv~~~p~~~~t~~~i~ 111 (223)
.+|||||+|.||+.+++.+... +.++ .++|+++... +.++.++. ..+.++++++ +++|+|++++|.. .+.
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~D~V~i~tp~~--~h~--- 76 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFASRYQNIQLFDQLEVFFKSSFDLVYIASPNS--LHF--- 76 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHGGGSSSCEEESCHHHHHTSSCSEEEECSCGG--GHH---
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeEeCCHHHHhCCCCCEEEEeCChH--HHH---
Confidence 3799999999999999999876 5675 4888865222 23445564 5567999999 7899999999932 221
Q ss_pred HHHHhcCCCCcEE-EEcC-CCCccCHHHHHHHHHhCCcc
Q 027408 112 KDRIAKMKKGVLI-VNNA-RGAIMDTQAVVDACSSGHIA 148 (223)
Q Consensus 112 ~~~~~~mk~ga~i-vn~s-rg~~vd~~al~~~L~~g~i~ 148 (223)
+-....++.|..+ +.-- .-.+-+.+.|.++.++..+.
T Consensus 77 ~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~ 115 (325)
T 2ho3_A 77 AQAKAALSAGKHVILEKPAVSQPQEWFDLIQTAEKNNCF 115 (325)
T ss_dssp HHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHcCCcEEEecCCcCCHHHHHHHHHHHHHcCCE
Confidence 2223334455533 3321 11222334555555554443
No 186
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=98.34 E-value=2e-06 Score=71.44 Aligned_cols=101 Identities=17% Similarity=0.130 Sum_probs=75.1
Q ss_pred CCCCEEEEEcccHHHHHHHHHHccCCCeE-EEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhcccH
Q 027408 34 LEGKTVGTVGCGRIGKLLLQRLKPFNCNL-LYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDK 112 (223)
Q Consensus 34 l~g~~igIiG~G~iG~~iA~~l~~~G~~V-~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~ 112 (223)
-..++|+++|+|.||+.+++. . ++++ .+|+ .+..+ +++...+++++++.++|+|+-|.+ ...+.+
T Consensus 10 ~~~~rV~i~G~GaIG~~v~~~--~-~leLv~v~~--~k~ge----lgv~a~~d~d~lla~pD~VVe~A~-----~~av~e 75 (253)
T 1j5p_A 10 HHHMTVLIIGMGNIGKKLVEL--G-NFEKIYAYD--RISKD----IPGVVRLDEFQVPSDVSTVVECAS-----PEAVKE 75 (253)
T ss_dssp -CCCEEEEECCSHHHHHHHHH--S-CCSEEEEEC--SSCCC----CSSSEECSSCCCCTTCCEEEECSC-----HHHHHH
T ss_pred cccceEEEECcCHHHHHHHhc--C-CcEEEEEEe--ccccc----cCceeeCCHHHHhhCCCEEEECCC-----HHHHHH
Confidence 367899999999999999998 4 7874 5677 22222 266667789999999999999986 234444
Q ss_pred HHHhcCCCCcEEEEcCCCCccCH---HHHHHHHHhCCcc
Q 027408 113 DRIAKMKKGVLIVNNARGAIMDT---QAVVDACSSGHIA 148 (223)
Q Consensus 113 ~~~~~mk~ga~ivn~srg~~vd~---~al~~~L~~g~i~ 148 (223)
.....++.|.-+|.+|-|.+.|. +.|.++.++|.-.
T Consensus 76 ~~~~iL~aG~dvv~~S~gaLad~~l~~~L~~aA~~gg~~ 114 (253)
T 1j5p_A 76 YSLQILKNPVNYIIISTSAFADEVFRERFFSELKNSPAR 114 (253)
T ss_dssp HHHHHTTSSSEEEECCGGGGGSHHHHHHHHHHHHTCSCE
T ss_pred HHHHHHHCCCCEEEcChhhhcCHHHHHHHHHHHHHCCCe
Confidence 57788899999999999988887 4455555555433
No 187
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=98.33 E-value=8.3e-07 Score=74.51 Aligned_cols=71 Identities=18% Similarity=0.186 Sum_probs=52.2
Q ss_pred cCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCC-hhHHHhhC----CeecCCHHhhcc-cCCEEEEcCCCC
Q 027408 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMD-PQLEKETG----AKFEEDLDTMLP-KCDIVVVNTPLT 103 (223)
Q Consensus 32 ~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~~g----~~~~~~l~e~l~-~aDvVv~~~p~~ 103 (223)
..+.+++++|+|.|.+|++++..|...|.+|.+++|+... .+.++.++ +.. .+++++.+ ++|+||.++|..
T Consensus 115 ~~~~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~-~~~~~~~~~~~DivIn~t~~~ 191 (272)
T 1p77_A 115 WLRPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQA-VSMDSIPLQTYDLVINATSAG 191 (272)
T ss_dssp CCCTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEE-EEGGGCCCSCCSEEEECCCC-
T ss_pred CCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEE-eeHHHhccCCCCEEEECCCCC
Confidence 4678999999999999999999999999999999997522 23333322 212 23445444 899999999954
No 188
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=98.33 E-value=1.3e-06 Score=78.20 Aligned_cols=109 Identities=13% Similarity=0.092 Sum_probs=73.5
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHH--------------------HhhCCeecCCHHhhcccCC
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLE--------------------KETGAKFEEDLDTMLPKCD 94 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~--------------------~~~g~~~~~~l~e~l~~aD 94 (223)
+-.+|+|||+|.+|..+|..+...|++|+++|.++...+.. ....+...++.++.+++||
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~ad 99 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAATD 99 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHTSS
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhcCC
Confidence 45689999999999999999999999999999874321111 0112345568888899999
Q ss_pred EEEEcCCCChhh-------hhcc--cHHHHhcCC---CCcEEEEcCCCCccCHHHHHH-HHHh
Q 027408 95 IVVVNTPLTEKT-------RGMF--DKDRIAKMK---KGVLIVNNARGAIMDTQAVVD-ACSS 144 (223)
Q Consensus 95 vVv~~~p~~~~t-------~~~i--~~~~~~~mk---~ga~ivn~srg~~vd~~al~~-~L~~ 144 (223)
++++|+| ||.. ..+. .+...+.++ ++.++|.-|.-.+=..+.+.. .|++
T Consensus 100 ~~~I~Vp-TP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~~~l~~ 161 (444)
T 3vtf_A 100 ATFIAVG-TPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVARAVAE 161 (444)
T ss_dssp EEEECCC-CCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHHHHHHHT
T ss_pred ceEEEec-CCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHHHHHHHH
Confidence 9999988 3321 1111 123334454 678999988877655555443 3443
No 189
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=98.32 E-value=1.6e-06 Score=73.00 Aligned_cols=71 Identities=20% Similarity=0.180 Sum_probs=53.3
Q ss_pred ccCCCCCEEEEEcccHHHHHHHHHHccCCC-eEEEEcCCCCC-hhHHHhhC---CeecCCHHhhc-ccCCEEEEcCCC
Q 027408 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMD-PQLEKETG---AKFEEDLDTML-PKCDIVVVNTPL 102 (223)
Q Consensus 31 ~~~l~g~~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~-~~~~~~~g---~~~~~~l~e~l-~~aDvVv~~~p~ 102 (223)
+.++.|+++.|+|.|.+|++++..|...|. +|.+++|+... .+.++.++ +.. .+++++- .++|+||.++|.
T Consensus 115 ~~~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~-~~~~~l~~~~~DivInaTp~ 191 (272)
T 3pwz_A 115 GEPLRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRI-SRYEALEGQSFDIVVNATSA 191 (272)
T ss_dssp CCCCTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEE-ECSGGGTTCCCSEEEECSSG
T ss_pred CCCccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeE-eeHHHhcccCCCEEEECCCC
Confidence 446899999999999999999999999996 89999997532 23333433 222 2444443 689999999994
No 190
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=98.32 E-value=1.2e-06 Score=75.54 Aligned_cols=66 Identities=23% Similarity=0.388 Sum_probs=52.5
Q ss_pred CEEEEEcccHHHHHHHHHHccC-CCeEE-EEcCCCCC-hhHHHhhCCe-ecCCHHhhcc--cCCEEEEcCCC
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPF-NCNLL-YHDRVKMD-PQLEKETGAK-FEEDLDTMLP--KCDIVVVNTPL 102 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~-G~~V~-~~d~~~~~-~~~~~~~g~~-~~~~l~e~l~--~aDvVv~~~p~ 102 (223)
.+|||||+|.||+.+++.+... ++++. ++|+++.. .+.++.+++. .+++++++++ ++|+|++|+|.
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~ 74 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYKDPHELIEDPNVDAVLVCSST 74 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCG
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeCCHHHHhcCCCCCEEEEcCCC
Confidence 4899999999999999999775 67765 78987532 3345566763 6789999997 79999999993
No 191
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=98.32 E-value=1e-07 Score=80.73 Aligned_cols=95 Identities=12% Similarity=0.066 Sum_probs=63.9
Q ss_pred CEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCC---eecCCHHhhc-ccCCEEEEcCCCChhhhhcccH
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA---KFEEDLDTML-PKCDIVVVNTPLTEKTRGMFDK 112 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~---~~~~~l~e~l-~~aDvVv~~~p~~~~t~~~i~~ 112 (223)
++|+|||.|.||..+|..|...|.+|.+++|+....+.....|. ....+..+.+ ..+|+|++++|.. .+..++ +
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~D~vilavk~~-~~~~~l-~ 80 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYYTVPHAPAQDIVVKGYEDVTNTFDVIIIAVKTH-QLDAVI-P 80 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSCEEEEEESSTTSCCEEEEEEEGGGCCSCEEEEEECSCGG-GHHHHG-G
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEeccCcEEEEecCCeeccceecCchHhcCCCCCEEEEeCCcc-CHHHHH-H
Confidence 68999999999999999999889999999997532222112232 1112334444 7899999999943 222222 3
Q ss_pred HHHhcCCCCcEEEEcCCCCcc
Q 027408 113 DRIAKMKKGVLIVNNARGAIM 133 (223)
Q Consensus 113 ~~~~~mk~ga~ivn~srg~~v 133 (223)
+....++++++||.+..|=-.
T Consensus 81 ~l~~~l~~~~~iv~~~nGi~~ 101 (294)
T 3g17_A 81 HLTYLAHEDTLIILAQNGYGQ 101 (294)
T ss_dssp GHHHHEEEEEEEEECCSSCCC
T ss_pred HHHHhhCCCCEEEEeccCccc
Confidence 344456678899998887544
No 192
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=98.31 E-value=1e-06 Score=75.73 Aligned_cols=68 Identities=13% Similarity=0.121 Sum_probs=53.5
Q ss_pred CCEEEEEcccHHHHHHHHHHccC-CCeEE-EEcCCCCC-hhHHHhhCC-eecCCHHhhcc--cCCEEEEcCCCC
Q 027408 36 GKTVGTVGCGRIGKLLLQRLKPF-NCNLL-YHDRVKMD-PQLEKETGA-KFEEDLDTMLP--KCDIVVVNTPLT 103 (223)
Q Consensus 36 g~~igIiG~G~iG~~iA~~l~~~-G~~V~-~~d~~~~~-~~~~~~~g~-~~~~~l~e~l~--~aDvVv~~~p~~ 103 (223)
-.+|||||+|.||+.+++.++.. ++++. ++|+++.. .+.++.+++ ..++++++++. ++|+|++++|..
T Consensus 5 ~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~ 78 (330)
T 3e9m_A 5 KIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAYGSYEELCKDETIDIIYIPTYNQ 78 (330)
T ss_dssp CEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCBSSHHHHHHCTTCSEEEECCCGG
T ss_pred eEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCceeCCHHHHhcCCCCCEEEEcCCCH
Confidence 35899999999999999999875 67765 77887632 234556677 46789999997 799999999943
No 193
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=98.30 E-value=1e-06 Score=75.15 Aligned_cols=106 Identities=16% Similarity=0.222 Sum_probs=65.9
Q ss_pred CEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCC----------HHhhcccCCEEEEcCCCChhh
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEED----------LDTMLPKCDIVVVNTPLTEKT 106 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~----------l~e~l~~aDvVv~~~p~~~~t 106 (223)
++|+|||.|.||..+|..|. .|.+|.+++|+....+..++.|+....+ -++....+|+|++++|.. .+
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~D~vilavK~~-~~ 80 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQEQAAAIQSEGIRLYKGGEEFRADCSADTSINSDFDLLVVTVKQH-QL 80 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCEEESSCCSCCSEEEECCCGG-GH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCHHHHHHHHhCCceEecCCCeecccccccccccCCCCEEEEEeCHH-HH
Confidence 68999999999999999999 8999999999753233334445432110 124567899999999932 12
Q ss_pred hhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCcc
Q 027408 107 RGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (223)
Q Consensus 107 ~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~ 148 (223)
..++ +.++.+.++. ||.+..|=- .++.+.+.+...++.
T Consensus 81 ~~~l--~~l~~~~~~~-ivs~~nGi~-~~e~l~~~~~~~~vl 118 (307)
T 3ego_A 81 QSVF--SSLERIGKTN-ILFLQNGMG-HIHDLKDWHVGHSIY 118 (307)
T ss_dssp HHHH--HHTTSSCCCE-EEECCSSSH-HHHHHHTCCCSCEEE
T ss_pred HHHH--HHhhcCCCCe-EEEecCCcc-HHHHHHHhCCCCcEE
Confidence 2221 2233344555 887766642 233444444444443
No 194
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=98.30 E-value=7.3e-07 Score=78.67 Aligned_cols=92 Identities=15% Similarity=0.110 Sum_probs=65.6
Q ss_pred EEEEEcccHHHHHHHHHHccCC--------CeEEEEcCCCCC--hhHHHh-----------------hCCeecCCHHhhc
Q 027408 38 TVGTVGCGRIGKLLLQRLKPFN--------CNLLYHDRVKMD--PQLEKE-----------------TGAKFEEDLDTML 90 (223)
Q Consensus 38 ~igIiG~G~iG~~iA~~l~~~G--------~~V~~~d~~~~~--~~~~~~-----------------~g~~~~~~l~e~l 90 (223)
||+|||.|.+|.++|..|...| .+|..|.|.+.. ....+. .++...+++++.+
T Consensus 36 KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t~dl~~al 115 (391)
T 4fgw_A 36 KVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANPDLIDSV 115 (391)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEESCHHHHH
T ss_pred eEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEeCCHHHHH
Confidence 8999999999999999997654 359999876421 111111 1234457899999
Q ss_pred ccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCC
Q 027408 91 PKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGA 131 (223)
Q Consensus 91 ~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~ 131 (223)
+++|+|++++| .+...-+-++....++++..+|+++.|=
T Consensus 116 ~~ad~ii~avP--s~~~r~~l~~l~~~~~~~~~iv~~~KGi 154 (391)
T 4fgw_A 116 KDVDIIVFNIP--HQFLPRICSQLKGHVDSHVRAISCLKGF 154 (391)
T ss_dssp TTCSEEEECSC--GGGHHHHHHHHTTTSCTTCEEEECCCSC
T ss_pred hcCCEEEEECC--hhhhHHHHHHhccccCCCceeEEecccc
Confidence 99999999999 2222222345556778899999999884
No 195
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=98.30 E-value=1.7e-06 Score=74.44 Aligned_cols=106 Identities=15% Similarity=0.167 Sum_probs=70.1
Q ss_pred CEEEEEcccHHHHHHHHHHc-c-CCCeE-EEEcCCCCCh-hHHHhhCC-eecCCHHhhcc--cCCEEEEcCCCChhhhhc
Q 027408 37 KTVGTVGCGRIGKLLLQRLK-P-FNCNL-LYHDRVKMDP-QLEKETGA-KFEEDLDTMLP--KCDIVVVNTPLTEKTRGM 109 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~-~-~G~~V-~~~d~~~~~~-~~~~~~g~-~~~~~l~e~l~--~aDvVv~~~p~~~~t~~~ 109 (223)
.+|||||+|.||+.+++.++ . .++++ .++|+++... ..++.+++ ..+.+++++++ ++|+|++++|....
T Consensus 9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h---- 84 (346)
T 3cea_A 9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYTNYKDMIDTENIDAIFIVAPTPFH---- 84 (346)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEESCHHHHHTTSCCSEEEECSCGGGH----
T ss_pred ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCChHhH----
Confidence 58999999999999999987 5 47774 5789875322 33455677 56679999986 69999999993222
Q ss_pred ccHHHHhcCCCCcEEEEcCCCCccC---HHHHHHHHHhC-Ccc
Q 027408 110 FDKDRIAKMKKGVLIVNNARGAIMD---TQAVVDACSSG-HIA 148 (223)
Q Consensus 110 i~~~~~~~mk~ga~ivn~srg~~vd---~~al~~~L~~g-~i~ 148 (223)
-+.....++.|..++. ...-..+ .+.|.++.++. .+.
T Consensus 85 -~~~~~~al~~G~~v~~-eKp~~~~~~~~~~l~~~a~~~~~~~ 125 (346)
T 3cea_A 85 -PEMTIYAMNAGLNVFC-EKPLGLDFNEVDEMAKVIKSHPNQI 125 (346)
T ss_dssp -HHHHHHHHHTTCEEEE-CSCCCSCHHHHHHHHHHHHTCTTSC
T ss_pred -HHHHHHHHHCCCEEEE-cCCCCCCHHHHHHHHHHHHhCCCCe
Confidence 1333445566765543 2221223 34477777766 555
No 196
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=98.28 E-value=1.6e-06 Score=74.12 Aligned_cols=107 Identities=14% Similarity=0.193 Sum_probs=67.3
Q ss_pred CEEEEEcccHHHH-HHHHHHccC-CCeEEEEcCCCCCh-hHHHhhCCee-cCCHHhhc-ccCCEEEEcCCCChhhhhccc
Q 027408 37 KTVGTVGCGRIGK-LLLQRLKPF-NCNLLYHDRVKMDP-QLEKETGAKF-EEDLDTML-PKCDIVVVNTPLTEKTRGMFD 111 (223)
Q Consensus 37 ~~igIiG~G~iG~-~iA~~l~~~-G~~V~~~d~~~~~~-~~~~~~g~~~-~~~l~e~l-~~aDvVv~~~p~~~~t~~~i~ 111 (223)
.+|||||+|.||+ .+++.++.. +.++.++|+++... +.++.+++.. +.+..+++ +++|+|++++|. ....
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~D~V~i~tp~--~~h~--- 77 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYRDVLQYGVDAVMIHAAT--DVHS--- 77 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTTGGGGGCCSEEEECSCG--GGHH---
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHcCCCccccCHHHHhhcCCCEEEEECCc--hhHH---
Confidence 4799999999998 488888765 67877999875322 3445567653 34455566 679999999993 2221
Q ss_pred HHHHhcCCCCc-EEEEc-CCCCccCHHHHHHHHHhCCcc
Q 027408 112 KDRIAKMKKGV-LIVNN-ARGAIMDTQAVVDACSSGHIA 148 (223)
Q Consensus 112 ~~~~~~mk~ga-~ivn~-srg~~vd~~al~~~L~~g~i~ 148 (223)
+-....++.|. +++.- ..-.+-+.+.|.++.++..+.
T Consensus 78 ~~~~~al~~Gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~ 116 (323)
T 1xea_A 78 TLAAFFLHLGIPTFVDKPLAASAQECENLYELAEKHHQP 116 (323)
T ss_dssp HHHHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHhcCCe
Confidence 22334455565 44442 112233445577777776655
No 197
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=98.26 E-value=2.8e-06 Score=72.87 Aligned_cols=66 Identities=15% Similarity=0.218 Sum_probs=50.6
Q ss_pred CEEEEEcccHHHHHHHHHHccC-CCeEE-EEcCCCC-ChhHHHhhCCe-ecCCHHhhcc--cCCEEEEcCCC
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPF-NCNLL-YHDRVKM-DPQLEKETGAK-FEEDLDTMLP--KCDIVVVNTPL 102 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~-G~~V~-~~d~~~~-~~~~~~~~g~~-~~~~l~e~l~--~aDvVv~~~p~ 102 (223)
.+|||||+|.||+.+++.++.. +.++. ++|+++. ..+.++++++. .+.++++++. +.|+|++++|.
T Consensus 6 ~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~ 77 (329)
T 3evn_A 6 VRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAYDKLEDMLADESIDVIYVATIN 77 (329)
T ss_dssp EEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CCCCSCEESCHHHHHTCTTCCEEEECSCG
T ss_pred eEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCc
Confidence 5899999999999999988765 55654 7788763 33445566774 6789999997 79999999994
No 198
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=98.26 E-value=4.3e-06 Score=63.34 Aligned_cols=104 Identities=15% Similarity=0.165 Sum_probs=73.4
Q ss_pred CCCEEEEEcc----cHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhcc
Q 027408 35 EGKTVGTVGC----GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMF 110 (223)
Q Consensus 35 ~g~~igIiG~----G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i 110 (223)
+-++|+|||. |++|..+++.+...|++|+-+++.....+ -.|...+.+++|+-...|++++++|. +....++
T Consensus 12 ~p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vnp~~~~~~---i~G~~~~~sl~el~~~vDlavi~vp~-~~~~~v~ 87 (140)
T 1iuk_A 12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEE---LFGEEAVASLLDLKEPVDILDVFRPP-SALMDHL 87 (140)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSE---ETTEECBSSGGGCCSCCSEEEECSCH-HHHTTTH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeCCCcccCc---CCCEEecCCHHHCCCCCCEEEEEeCH-HHHHHHH
Confidence 4578999999 89999999999999999777766411111 24677777899998899999999995 4444444
Q ss_pred cHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCcc
Q 027408 111 DKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (223)
Q Consensus 111 ~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~ 148 (223)
++..+. ..+.++++.+- .++++.+..++..++
T Consensus 88 -~~~~~~-gi~~i~~~~g~----~~~~~~~~a~~~Gir 119 (140)
T 1iuk_A 88 -PEVLAL-RPGLVWLQSGI----RHPEFEKALKEAGIP 119 (140)
T ss_dssp -HHHHHH-CCSCEEECTTC----CCHHHHHHHHHTTCC
T ss_pred -HHHHHc-CCCEEEEcCCc----CHHHHHHHHHHcCCE
Confidence 344433 33456655432 257778888777666
No 199
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=98.26 E-value=3e-06 Score=72.76 Aligned_cols=102 Identities=14% Similarity=0.134 Sum_probs=68.9
Q ss_pred CEEEEEcccHHHHHHHHHHccC-CCe-EEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhcccHHH
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPF-NCN-LLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDR 114 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~-G~~-V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~ 114 (223)
.+|+|||+|+||+.+++.+... +++ +.++|++... ... +++..++++++++.++|+|++++|.... -+..
T Consensus 4 irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~-~~~--~gv~~~~d~~~ll~~~DvViiatp~~~h-----~~~~ 75 (320)
T 1f06_A 4 IRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATL-DTK--TPVFDVADVDKHADDVDVLFLCMGSATD-----IPEQ 75 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCC-SSS--SCEEEGGGGGGTTTTCSEEEECSCTTTH-----HHHH
T ss_pred CEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHH-hhc--CCCceeCCHHHHhcCCCEEEEcCCcHHH-----HHHH
Confidence 4799999999999999999776 677 4588887533 222 4565567888888889999999984322 1344
Q ss_pred HhcCCCCcEEEEcCCCCc-c-CH-HHHHHHHHhCC
Q 027408 115 IAKMKKGVLIVNNARGAI-M-DT-QAVVDACSSGH 146 (223)
Q Consensus 115 ~~~mk~ga~ivn~srg~~-v-d~-~al~~~L~~g~ 146 (223)
...++.|..++...-..+ + +. +.|.++.+++.
T Consensus 76 ~~al~aG~~Vv~ekp~~~~~~~~~~~l~~~a~~~~ 110 (320)
T 1f06_A 76 APKFAQFACTVDTYDNHRDIPRHRQVMNEAATAAG 110 (320)
T ss_dssp HHHHTTTSEEECCCCCGGGHHHHHHHHHHHHHHHT
T ss_pred HHHHHCCCEEEECCCCcCCHHHHHHHHHHHHHhCC
Confidence 456677877776554332 2 22 34555555544
No 200
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=98.25 E-value=3.1e-06 Score=70.88 Aligned_cols=97 Identities=13% Similarity=0.171 Sum_probs=64.1
Q ss_pred cCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCC-hhHHHhhCC---eecCCHHhhc-ccCCEEEEcCCCChhh
Q 027408 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMD-PQLEKETGA---KFEEDLDTML-PKCDIVVVNTPLTEKT 106 (223)
Q Consensus 32 ~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~~g~---~~~~~l~e~l-~~aDvVv~~~p~~~~t 106 (223)
..+.|+++.|+|.|.+|+++++.|...|.+|++++|+... .+.++.++. ....+++++. .++|+|+.++|.....
T Consensus 115 ~~l~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivVn~t~~~~~~ 194 (271)
T 1nyt_A 115 FIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSGISG 194 (271)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSCGGGT
T ss_pred cCcCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecHHHhccCCCCEEEECCCCCCCC
Confidence 4678999999999999999999999999999999997532 233333221 1112344444 5899999999854321
Q ss_pred h-hcccHHHHhcCCCCcEEEEcCCCC
Q 027408 107 R-GMFDKDRIAKMKKGVLIVNNARGA 131 (223)
Q Consensus 107 ~-~~i~~~~~~~mk~ga~ivn~srg~ 131 (223)
. ..+.. ..++++.+++|+.-..
T Consensus 195 ~~~~i~~---~~l~~~~~v~D~~y~p 217 (271)
T 1nyt_A 195 DIPAIPS---SLIHPGIYCYDMFYQK 217 (271)
T ss_dssp CCCCCCG---GGCCTTCEEEESCCCS
T ss_pred CCCCCCH---HHcCCCCEEEEeccCC
Confidence 0 00221 2346677777776544
No 201
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=98.25 E-value=2.3e-06 Score=72.94 Aligned_cols=66 Identities=15% Similarity=0.274 Sum_probs=48.7
Q ss_pred CEEEEEcccHHHHHHHHHHccCC--CeEEEEcCCCCChh-HHHhh---------CCee-cCCHHhhcccCCEEEEcCCCC
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFN--CNLLYHDRVKMDPQ-LEKET---------GAKF-EEDLDTMLPKCDIVVVNTPLT 103 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G--~~V~~~d~~~~~~~-~~~~~---------g~~~-~~~l~e~l~~aDvVv~~~p~~ 103 (223)
++|+|||.|.||..+|..|...| .+|.++|+++...+ ....+ .+.. ..++ +.+++||+|++++|..
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~aDvViiav~~~ 80 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-AALADADVVISTLGNI 80 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGGTTCSEEEECCSCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHhCCCCEEEEecCCc
Confidence 58999999999999999998778 68999999752221 12111 1222 3566 6788999999999853
No 202
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=98.22 E-value=5.1e-06 Score=70.23 Aligned_cols=71 Identities=20% Similarity=0.211 Sum_probs=55.0
Q ss_pred cCCCCCEEEEEcccHHHHHHHHHHccCCC-eEEEEcCCCCCh-hHHHhhC-------Ceec--CCHHhhcccCCEEEEcC
Q 027408 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDP-QLEKETG-------AKFE--EDLDTMLPKCDIVVVNT 100 (223)
Q Consensus 32 ~~l~g~~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~-~~~~~~g-------~~~~--~~l~e~l~~aDvVv~~~ 100 (223)
..+.|+++.|+|.|.+|++++..|...|. +|.+++|+.... +.++.++ +... +++++.++++|+||.++
T Consensus 123 ~~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaT 202 (283)
T 3jyo_A 123 PNAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNAT 202 (283)
T ss_dssp TTCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEECS
T ss_pred cCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEECC
Confidence 46899999999999999999999999999 699999975322 2222221 2222 37888889999999999
Q ss_pred CC
Q 027408 101 PL 102 (223)
Q Consensus 101 p~ 102 (223)
|.
T Consensus 203 p~ 204 (283)
T 3jyo_A 203 PM 204 (283)
T ss_dssp ST
T ss_pred CC
Confidence 94
No 203
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=98.22 E-value=7.7e-06 Score=62.20 Aligned_cols=102 Identities=13% Similarity=0.094 Sum_probs=72.5
Q ss_pred CCEEEEEcc----cHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhccc
Q 027408 36 GKTVGTVGC----GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 111 (223)
Q Consensus 36 g~~igIiG~----G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~ 111 (223)
-++|+|||. |.+|..+++.|...|++|+-.++.. .+ -.|+..+.+++|+....|++++++|. +....++
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp~~--~~---i~G~~~y~sl~~l~~~vDlvvi~vp~-~~~~~vv- 94 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKY--EE---VLGRKCYPSVLDIPDKIEVVDLFVKP-KLTMEYV- 94 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTC--SE---ETTEECBSSGGGCSSCCSEEEECSCH-HHHHHHH-
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEECCCC--Ce---ECCeeccCCHHHcCCCCCEEEEEeCH-HHHHHHH-
Confidence 689999999 7999999999999999977776643 22 24777778899998899999999994 3333443
Q ss_pred HHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccE
Q 027408 112 KDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAG 149 (223)
Q Consensus 112 ~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~ 149 (223)
++..+. ..+.+++.. |. .++.+.+..++..+.-
T Consensus 95 ~~~~~~-gi~~i~~~~--g~--~~~~l~~~a~~~Gi~v 127 (144)
T 2d59_A 95 EQAIKK-GAKVVWFQY--NT--YNREASKKADEAGLII 127 (144)
T ss_dssp HHHHHH-TCSEEEECT--TC--CCHHHHHHHHHTTCEE
T ss_pred HHHHHc-CCCEEEECC--Cc--hHHHHHHHHHHcCCEE
Confidence 333332 334555443 32 3677888888876663
No 204
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=98.21 E-value=1.3e-06 Score=73.85 Aligned_cols=96 Identities=20% Similarity=0.197 Sum_probs=63.4
Q ss_pred ccCCCCCEEEEEcccHHHHHHHHHHccCCC-eEEEEcCCCCCh-hHHHhhCCeecCCHHhhcccCCEEEEcCCCCh--hh
Q 027408 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDP-QLEKETGAKFEEDLDTMLPKCDIVVVNTPLTE--KT 106 (223)
Q Consensus 31 ~~~l~g~~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~-~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~--~t 106 (223)
+.++.|+++.|+|.|.+|++++..|...|. +|.+++|+.... +.++.+......++++ + ++|+||.++|..- ..
T Consensus 117 ~~~~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~~~~~~~l~~-l-~~DivInaTp~Gm~~~~ 194 (282)
T 3fbt_A 117 RVEIKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFKVISYDELSN-L-KGDVIINCTPKGMYPKE 194 (282)
T ss_dssp TCCCTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSEEEEHHHHTT-C-CCSEEEECSSTTSTTST
T ss_pred CCCccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcCcccHHHHHh-c-cCCEEEECCccCccCCC
Confidence 456889999999999999999999999998 899999975222 2222222122233444 4 8999999999532 11
Q ss_pred h-hcccHHHHhcCCCCcEEEEcCCCC
Q 027408 107 R-GMFDKDRIAKMKKGVLIVNNARGA 131 (223)
Q Consensus 107 ~-~~i~~~~~~~mk~ga~ivn~srg~ 131 (223)
. ..+..+. ++++.+++|+.-.+
T Consensus 195 ~~~pi~~~~---l~~~~~v~DlvY~P 217 (282)
T 3fbt_A 195 GESPVDKEV---VAKFSSAVDLIYNP 217 (282)
T ss_dssp TCCSSCHHH---HTTCSEEEESCCSS
T ss_pred ccCCCCHHH---cCCCCEEEEEeeCC
Confidence 1 1234433 35677777775433
No 205
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=98.21 E-value=1.8e-06 Score=74.47 Aligned_cols=66 Identities=21% Similarity=0.314 Sum_probs=52.0
Q ss_pred CEEEEEcccHHHHHHHHHHc-c-CCCeEE-EEcCCCCC-hhHHHhhC--CeecCCHHhhccc--CCEEEEcCCC
Q 027408 37 KTVGTVGCGRIGKLLLQRLK-P-FNCNLL-YHDRVKMD-PQLEKETG--AKFEEDLDTMLPK--CDIVVVNTPL 102 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~-~-~G~~V~-~~d~~~~~-~~~~~~~g--~~~~~~l~e~l~~--aDvVv~~~p~ 102 (223)
.+|||||+|.||+.+++.++ . -++++. ++|+++.. .+.++.++ ...++++++++++ .|+|++|+|.
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~ 76 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSWG 76 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTCCCEEESSHHHHHHCTTCCEEEECSCG
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEECCCc
Confidence 47999999999999999998 5 367755 78887532 23445667 5677899999975 9999999993
No 206
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=98.17 E-value=3.2e-06 Score=73.46 Aligned_cols=68 Identities=22% Similarity=0.269 Sum_probs=53.5
Q ss_pred CCCEEEEEcccHHHHHHHHHHc-c-CCCeEE-EEcCCCCCh-hHHHhhC--CeecCCHHhhcc--cCCEEEEcCCC
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLK-P-FNCNLL-YHDRVKMDP-QLEKETG--AKFEEDLDTMLP--KCDIVVVNTPL 102 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~-~-~G~~V~-~~d~~~~~~-~~~~~~g--~~~~~~l~e~l~--~aDvVv~~~p~ 102 (223)
.-.+|||||+|.||+..++.+. . -++++. ++|+++... +.+++++ ...++++++++. +.|+|++|+|.
T Consensus 22 ~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~ 97 (357)
T 3ec7_A 22 MTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIEAKDYNDYHDLINDKDVEVVIITASN 97 (357)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTCCCEEESSHHHHHHCTTCCEEEECSCG
T ss_pred CeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEEcCCc
Confidence 3458999999999999999987 4 377765 789876433 3455667 567789999997 58999999994
No 207
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=98.16 E-value=1e-06 Score=75.07 Aligned_cols=106 Identities=17% Similarity=0.280 Sum_probs=66.2
Q ss_pred CEEEEEcccHHHHHHHHHHccC-CCeE-EEEcCCCCChhHHHhhCCeecCCHHhhcc--cCCEEEEcCCCChhhhhcccH
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPF-NCNL-LYHDRVKMDPQLEKETGAKFEEDLDTMLP--KCDIVVVNTPLTEKTRGMFDK 112 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~-G~~V-~~~d~~~~~~~~~~~~g~~~~~~l~e~l~--~aDvVv~~~p~~~~t~~~i~~ 112 (223)
.+|||||+|.||+.+++.+... +.++ .++|+++...+...+. +..+++++++++ ++|+|++++|.... -+
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~~~~~~l~~~~~D~V~i~tp~~~h-----~~ 84 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNLALVPPG-CVIESDWRSVVSAPEVEAVIIATPPATH-----AE 84 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTCCTT-CEEESSTHHHHTCTTCCEEEEESCGGGH-----HH
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHhh-CcccCCHHHHhhCCCCCEEEEeCChHHH-----HH
Confidence 5899999999999999999875 6774 5889864221111111 445678999985 79999999993222 12
Q ss_pred HHHhcCCCCcEE-EEc-CCCCccCHHHHHHHHHhCCcc
Q 027408 113 DRIAKMKKGVLI-VNN-ARGAIMDTQAVVDACSSGHIA 148 (223)
Q Consensus 113 ~~~~~mk~ga~i-vn~-srg~~vd~~al~~~L~~g~i~ 148 (223)
-....++.|..+ +.- ..-.+-+...|.++.++..+.
T Consensus 85 ~~~~al~~Gk~v~~eKP~~~~~~~~~~l~~~a~~~g~~ 122 (315)
T 3c1a_A 85 ITLAAIASGKAVLVEKPLTLDLAEAEAVAAAAKATGVM 122 (315)
T ss_dssp HHHHHHHTTCEEEEESSSCSCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHCCCcEEEcCCCcCCHHHHHHHHHHHHHcCCE
Confidence 333445666644 432 112233345566666655444
No 208
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=98.16 E-value=9.1e-06 Score=69.74 Aligned_cols=107 Identities=8% Similarity=0.085 Sum_probs=68.1
Q ss_pred CEEEEEcccHHHH-HHHHHHccCCCeE-EEEcCCCCC-hhHHHhh-CCeecCCHHhhcc--cCCEEEEcCCCChhhhhcc
Q 027408 37 KTVGTVGCGRIGK-LLLQRLKPFNCNL-LYHDRVKMD-PQLEKET-GAKFEEDLDTMLP--KCDIVVVNTPLTEKTRGMF 110 (223)
Q Consensus 37 ~~igIiG~G~iG~-~iA~~l~~~G~~V-~~~d~~~~~-~~~~~~~-g~~~~~~l~e~l~--~aDvVv~~~p~~~~t~~~i 110 (223)
.+|||||+|.+|. .++..++..+.++ .++|+++.. .+.++.+ +...+++++++++ +.|+|++++|....
T Consensus 5 ~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h----- 79 (336)
T 2p2s_A 5 IRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESDSDNRAKFTSLFPSVPFAASAEQLITDASIDLIACAVIPCDR----- 79 (336)
T ss_dssp CEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSCTTSCHHHHHHSTTCCBCSCHHHHHTCTTCCEEEECSCGGGH-----
T ss_pred cEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCCHHHHHHHHHhcCCCcccCCHHHHhhCCCCCEEEEeCChhhH-----
Confidence 5899999999996 6777776668885 588988643 3445555 4566789999996 68999999993322
Q ss_pred cHHHHhcCCCCcEE-EEc-CCCCccCHHHHHHHHHhCCcc
Q 027408 111 DKDRIAKMKKGVLI-VNN-ARGAIMDTQAVVDACSSGHIA 148 (223)
Q Consensus 111 ~~~~~~~mk~ga~i-vn~-srg~~vd~~al~~~L~~g~i~ 148 (223)
-+.....++.|..+ +.- ..-.+-+.++|.++.++..+.
T Consensus 80 ~~~~~~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g~~ 119 (336)
T 2p2s_A 80 AELALRTLDAGKDFFTAKPPLTTLEQLDAVQRRVAETGRK 119 (336)
T ss_dssp HHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCE
Confidence 13334445556543 331 111222334455555554443
No 209
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=98.15 E-value=2e-05 Score=74.87 Aligned_cols=117 Identities=13% Similarity=0.176 Sum_probs=84.5
Q ss_pred CCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHh---------------h-------CCeecCCHHhhcccC
Q 027408 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE---------------T-------GAKFEEDLDTMLPKC 93 (223)
Q Consensus 36 g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~---------------~-------g~~~~~~l~e~l~~a 93 (223)
=++|||||.|.||..||..+...|++|+.+|+++...+.... . .+....+++ .+++|
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~a 394 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTK-ELSTV 394 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCGG-GGGSC
T ss_pred ccEEEEEcccHHHHHHHHHHHhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcHH-HHhhC
Confidence 469999999999999999999999999999987532211100 0 012233444 47799
Q ss_pred CEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCC
Q 027408 94 DIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWN 156 (223)
Q Consensus 94 DvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~ 156 (223)
|+||-++|.+.+.+.-+-+++-+.++++++|..-+.+ +....|.+.++ ..-+.+++--|.
T Consensus 395 DlVIEAV~E~l~iK~~vf~~le~~~~~~aIlASNTSs--l~i~~ia~~~~-~p~r~ig~HFfn 454 (742)
T 3zwc_A 395 DLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSA--LNVDDIASSTD-RPQLVIGTHFFS 454 (742)
T ss_dssp SEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHHTTSS-CGGGEEEEECCS
T ss_pred CEEEEeccccHHHHHHHHHHHhhcCCCCceEEecCCc--CChHHHHhhcC-CccccccccccC
Confidence 9999999988888888888888889999998655444 55566666543 445556776554
No 210
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=98.15 E-value=5.6e-06 Score=71.86 Aligned_cols=107 Identities=18% Similarity=0.296 Sum_probs=71.1
Q ss_pred CEEEEEcccHHHHHHHHHHccC-CCeE-EEEcCCCCC-hhHHHhhCC----eecCCHHhhcc--cCCEEEEcCCCChhhh
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPF-NCNL-LYHDRVKMD-PQLEKETGA----KFEEDLDTMLP--KCDIVVVNTPLTEKTR 107 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~-G~~V-~~~d~~~~~-~~~~~~~g~----~~~~~l~e~l~--~aDvVv~~~p~~~~t~ 107 (223)
.+|||||+|.||+.+++.+... ++++ .++|+++.. .+.++++++ ..+.+++++++ ++|+|++++|.. .+
T Consensus 7 ~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~--~h 84 (362)
T 1ydw_A 7 IRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPTS--LH 84 (362)
T ss_dssp EEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCGG--GH
T ss_pred eEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCCCeeeCCHHHHhcCCCCCEEEEcCChH--HH
Confidence 5899999999999999998765 5675 578886522 234455563 45679999986 599999999932 22
Q ss_pred hcccHHHHhcCCCCcEEEEcC--CCCccCHHHHHHHHHhCCcc
Q 027408 108 GMFDKDRIAKMKKGVLIVNNA--RGAIMDTQAVVDACSSGHIA 148 (223)
Q Consensus 108 ~~i~~~~~~~mk~ga~ivn~s--rg~~vd~~al~~~L~~g~i~ 148 (223)
-+-....++.|..++.-- .-.+-+.++|.++.++..+.
T Consensus 85 ---~~~~~~al~aGk~V~~EKP~a~~~~e~~~l~~~a~~~g~~ 124 (362)
T 1ydw_A 85 ---VEWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGVQ 124 (362)
T ss_dssp ---HHHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTCC
T ss_pred ---HHHHHHHHHCCCeEEEecCCcCCHHHHHHHHHHHHHcCCE
Confidence 233445567777655422 12223345677777776655
No 211
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=98.15 E-value=1.7e-06 Score=76.14 Aligned_cols=84 Identities=19% Similarity=0.289 Sum_probs=68.8
Q ss_pred CCCEEEEEcc-cHHHHHHHHHHccCCC---eEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhcc
Q 027408 35 EGKTVGTVGC-GRIGKLLLQRLKPFNC---NLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMF 110 (223)
Q Consensus 35 ~g~~igIiG~-G~iG~~iA~~l~~~G~---~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i 110 (223)
...+|.|||. |..|...++.++++|+ .|.++|++.. ..|.. + +.+.++|+||.|+........++
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~------~~g~~----~-~~i~~aDivIn~vlig~~aP~Lv 281 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKET------SRGGP----F-DEIPQADIFINCIYLSKPIAPFT 281 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHH------TTCSC----C-THHHHSSEEEECCCCCSSCCCSC
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeecccc------ccCCc----h-hhHhhCCEEEECcCcCCCCCccc
Confidence 4668999999 9999999999999998 8999998531 11222 2 33569999999998766667889
Q ss_pred cHHHHhcC-CCCcEEEEcCC
Q 027408 111 DKDRIAKM-KKGVLIVNNAR 129 (223)
Q Consensus 111 ~~~~~~~m-k~ga~ivn~sr 129 (223)
.++.++.| |+|++|||+|-
T Consensus 282 t~e~v~~m~k~gsVIVDVA~ 301 (394)
T 2qrj_A 282 NMEKLNNPNRRLRTVVDVSA 301 (394)
T ss_dssp CHHHHCCTTCCCCEEEETTC
T ss_pred CHHHHhcCcCCCeEEEEEec
Confidence 99999999 99999999973
No 212
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=98.15 E-value=5.1e-06 Score=71.70 Aligned_cols=69 Identities=22% Similarity=0.223 Sum_probs=51.7
Q ss_pred CCEEEEEcccHHHHHHHHHHccCCC-eEEEEcCCCCChhH-----HHh---h----CCeecCCHHhhcccCCEEEEcC--
Q 027408 36 GKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQL-----EKE---T----GAKFEEDLDTMLPKCDIVVVNT-- 100 (223)
Q Consensus 36 g~~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~-----~~~---~----g~~~~~~l~e~l~~aDvVv~~~-- 100 (223)
.++|+|||.|.+|..+|..|...|+ +|..||+++...+. ... . .+....++++.+++||+|++++
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~a~g~ 88 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTAGL 88 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEEccCC
Confidence 4699999999999999999988887 89999997632222 110 1 1223468888899999999998
Q ss_pred CCCh
Q 027408 101 PLTE 104 (223)
Q Consensus 101 p~~~ 104 (223)
|..+
T Consensus 89 p~~~ 92 (331)
T 1pzg_A 89 TKVP 92 (331)
T ss_dssp SSCT
T ss_pred CCCC
Confidence 6433
No 213
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=98.14 E-value=3e-06 Score=72.78 Aligned_cols=66 Identities=14% Similarity=0.138 Sum_probs=51.4
Q ss_pred CEEEEEcccHHHHHHHHHHccCC---Ce-EEEEcCCCC-ChhHHHhhCC-eecCCHHhhcc--cCCEEEEcCCC
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFN---CN-LLYHDRVKM-DPQLEKETGA-KFEEDLDTMLP--KCDIVVVNTPL 102 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G---~~-V~~~d~~~~-~~~~~~~~g~-~~~~~l~e~l~--~aDvVv~~~p~ 102 (223)
.+|||||+|.||+..++.++..+ ++ +.++|+++. ..+.++++++ ..++++++++. +.|+|++++|.
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~ 76 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQH 76 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCSCEESSHHHHHHCTTCCEEEECCCG
T ss_pred cEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCc
Confidence 48999999999999999998654 35 457888652 2344566777 46789999996 69999999993
No 214
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=98.13 E-value=1.4e-05 Score=68.48 Aligned_cols=72 Identities=17% Similarity=0.120 Sum_probs=53.2
Q ss_pred ccCCCCCEEEEEcccHHHHHHHHHHccCCC-eEEEEcCCCCChhHH----Hh----hCC--e--ecCC---HHhhcccCC
Q 027408 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLE----KE----TGA--K--FEED---LDTMLPKCD 94 (223)
Q Consensus 31 ~~~l~g~~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~----~~----~g~--~--~~~~---l~e~l~~aD 94 (223)
+.++.|+++.|+|.|.+|++++..|...|+ +|.+++|+....+.+ ++ .+. . ..++ +.+.+.++|
T Consensus 149 ~~~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aD 228 (315)
T 3tnl_A 149 GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESV 228 (315)
T ss_dssp TCCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCS
T ss_pred CCCccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCC
Confidence 456899999999999999999999999999 899999983222222 11 121 1 1223 456678899
Q ss_pred EEEEcCCC
Q 027408 95 IVVVNTPL 102 (223)
Q Consensus 95 vVv~~~p~ 102 (223)
+||.++|.
T Consensus 229 iIINaTp~ 236 (315)
T 3tnl_A 229 IFTNATGV 236 (315)
T ss_dssp EEEECSST
T ss_pred EEEECccC
Confidence 99999994
No 215
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=98.13 E-value=5.8e-06 Score=71.35 Aligned_cols=85 Identities=18% Similarity=0.179 Sum_probs=57.2
Q ss_pred CEEEEEcccHHHHH-HHH-HHcc-CCCeEE-EEcCCCCChhHHHh-hCCeecCCHHhhccc--CCEEEEcCCCChhhhhc
Q 027408 37 KTVGTVGCGRIGKL-LLQ-RLKP-FNCNLL-YHDRVKMDPQLEKE-TGAKFEEDLDTMLPK--CDIVVVNTPLTEKTRGM 109 (223)
Q Consensus 37 ~~igIiG~G~iG~~-iA~-~l~~-~G~~V~-~~d~~~~~~~~~~~-~g~~~~~~l~e~l~~--aDvVv~~~p~~~~t~~~ 109 (223)
.+|||||+|.||+. .+. .+.. -++++. ++|+++...+.... .++..++++++++.+ .|+|++|+|.....
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~--- 79 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYSHIHFTSDLDEVLNDPDVKLVVVCTHADSHF--- 79 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGSGGGTTCEEESCTHHHHTCTTEEEEEECSCGGGHH---
T ss_pred eEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHHHhcCCCceECCHHHHhcCCCCCEEEEcCChHHHH---
Confidence 47999999999996 555 4343 477865 88987644333333 356677899999976 89999999943222
Q ss_pred ccHHHHhcCCCCcEEEE
Q 027408 110 FDKDRIAKMKKGVLIVN 126 (223)
Q Consensus 110 i~~~~~~~mk~ga~ivn 126 (223)
+-....++.|..++.
T Consensus 80 --~~~~~al~aGk~Vl~ 94 (345)
T 3f4l_A 80 --EYAKRALEAGKNVLV 94 (345)
T ss_dssp --HHHHHHHHTTCEEEE
T ss_pred --HHHHHHHHcCCcEEE
Confidence 333344555655554
No 216
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=98.12 E-value=5.9e-06 Score=71.79 Aligned_cols=66 Identities=21% Similarity=0.250 Sum_probs=49.5
Q ss_pred CEEEEEcccHHHHHHHHHHccC--------CCeE-EEEcCCCCC-hhHHHhhCCe-ecCCHHhhcc--cCCEEEEcCCC
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPF--------NCNL-LYHDRVKMD-PQLEKETGAK-FEEDLDTMLP--KCDIVVVNTPL 102 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~--------G~~V-~~~d~~~~~-~~~~~~~g~~-~~~~l~e~l~--~aDvVv~~~p~ 102 (223)
-+|||||+|.||+..++.++.. +++| .++|+++.. .+.++++++. .+++++++++ +.|+|++|+|.
T Consensus 26 irvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~IatP~ 104 (393)
T 4fb5_A 26 LGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATADWRALIADPEVDVVSVTTPN 104 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEESCHHHHHHCTTCCEEEECSCG
T ss_pred ccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecCCHHHHhcCCCCcEEEECCCh
Confidence 4799999999999888776542 5674 578887643 3456677874 6789999995 57999999993
No 217
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=98.12 E-value=4.7e-06 Score=71.03 Aligned_cols=101 Identities=18% Similarity=0.300 Sum_probs=62.0
Q ss_pred CEEEEEcccHHHHHHHHHHccC-CCeEE-EEcCCCCChhHHHhhCCe--ecCCHHhhcccCCEEEEcCCCChhhhhcccH
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPF-NCNLL-YHDRVKMDPQLEKETGAK--FEEDLDTMLPKCDIVVVNTPLTEKTRGMFDK 112 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~g~~--~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~ 112 (223)
.+|||||+|.||+.+++.++.. ++++. ++|+++...+ ..|+. .++++.+. .++|+|++|+| +.++ -+
T Consensus 10 irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~~~---~~g~~~~~~~~l~~~-~~~DvViiatp--~~~h---~~ 80 (304)
T 3bio_A 10 IRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAEVP---FELQPFRVVSDIEQL-ESVDVALVCSP--SREV---ER 80 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC----------CCTTSCEESSGGGS-SSCCEEEECSC--HHHH---HH
T ss_pred CEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHHHH---HcCCCcCCHHHHHhC-CCCCEEEECCC--chhh---HH
Confidence 5899999999999999999764 67876 6888753322 24543 23455555 68999999999 2222 13
Q ss_pred HHHhcCCCCcEEEEcCC--C-CccCHHHHHHHHHhCC
Q 027408 113 DRIAKMKKGVLIVNNAR--G-AIMDTQAVVDACSSGH 146 (223)
Q Consensus 113 ~~~~~mk~ga~ivn~sr--g-~~vd~~al~~~L~~g~ 146 (223)
.....++.|..+++..- + ...+...|.++.++..
T Consensus 81 ~~~~al~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~~g 117 (304)
T 3bio_A 81 TALEILKKGICTADSFDIHDGILALRRSLGDAAGKSG 117 (304)
T ss_dssp HHHHHHTTTCEEEECCCCGGGHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCeEEECCCCCCCCHHHHHHHHHHHHhCC
Confidence 34455667777776532 1 2223345666655544
No 218
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=98.11 E-value=1e-05 Score=66.93 Aligned_cols=82 Identities=7% Similarity=0.073 Sum_probs=59.2
Q ss_pred CEEEEEcccHHHHHHHHHHccCCCeEE-EEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhcccHHHH
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNCNLL-YHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRI 115 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~~V~-~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~ 115 (223)
++|+|+|+|+||+.+++.+...+.++. ++|++.. ...++..++++++++ ++|+|+-.++ |+. . .+.+
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~~eLva~~d~~~~-----~~~gv~v~~dl~~l~-~~DVvIDft~--p~a--~--~~~~ 71 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPK-----ATTPYQQYQHIADVK-GADVAIDFSN--PNL--L--FPLL 71 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC-------CCSCBCSCTTTCT-TCSEEEECSC--HHH--H--HHHH
T ss_pred eEEEEECcCHHHHHHHHHHHhCCCEEEEEEecCcc-----ccCCCceeCCHHHHh-CCCEEEEeCC--hHH--H--HHHH
Confidence 689999999999999999987655755 5888653 145777778899988 9999985544 222 1 2333
Q ss_pred hcCCCCcEEEEcCCCC
Q 027408 116 AKMKKGVLIVNNARGA 131 (223)
Q Consensus 116 ~~mk~ga~ivn~srg~ 131 (223)
. ++.|.-+|..+.|-
T Consensus 72 ~-l~~g~~vVigTTG~ 86 (243)
T 3qy9_A 72 D-EDFHLPLVVATTGE 86 (243)
T ss_dssp T-SCCCCCEEECCCSS
T ss_pred H-HhcCCceEeCCCCC
Confidence 4 78888888777764
No 219
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=98.10 E-value=1.5e-05 Score=68.96 Aligned_cols=65 Identities=18% Similarity=0.356 Sum_probs=50.7
Q ss_pred CEEEEEcccHHHH-HHHHHHccC-CCeEE-EEcCCCCChhHHHh---hCCeecCCHHhhccc--CCEEEEcCCC
Q 027408 37 KTVGTVGCGRIGK-LLLQRLKPF-NCNLL-YHDRVKMDPQLEKE---TGAKFEEDLDTMLPK--CDIVVVNTPL 102 (223)
Q Consensus 37 ~~igIiG~G~iG~-~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~---~g~~~~~~l~e~l~~--aDvVv~~~p~ 102 (223)
.+|||||+|.||+ ..+..++.. +++|. ++|++ ...+.++. .++..+.++++++.+ .|+|++++|.
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~-~~~~~a~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~ 75 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH-VNEKAAAPFKEKGVNFTADLNELLTDPEIELITICTPA 75 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT-CCHHHHHHHHTTTCEEESCTHHHHSCTTCCEEEECSCG
T ss_pred eEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC-HHHHHHHhhCCCCCeEECCHHHHhcCCCCCEEEEeCCc
Confidence 4899999999999 577777665 67764 78887 45555555 466777899999975 8999999994
No 220
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=98.10 E-value=1.1e-05 Score=69.55 Aligned_cols=64 Identities=20% Similarity=0.302 Sum_probs=48.6
Q ss_pred CCEEEEEcccHHHHHHHHHHccCCC-eEEEEcCCCCChhH-----HHh---h----CCeecCCHHhhcccCCEEEEcC
Q 027408 36 GKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQL-----EKE---T----GAKFEEDLDTMLPKCDIVVVNT 100 (223)
Q Consensus 36 g~~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~-----~~~---~----g~~~~~~l~e~l~~aDvVv~~~ 100 (223)
.++|+|||.|.||..+|..+...|+ +|..||+++...+. ... . .+....++ +.+++||+|++++
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~VI~av 90 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQNSDVVIITA 90 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCCCCEEEEcC
Confidence 3699999999999999999998888 99999997643321 010 0 13333567 7789999999998
No 221
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=98.09 E-value=6.6e-06 Score=62.59 Aligned_cols=90 Identities=16% Similarity=0.118 Sum_probs=57.9
Q ss_pred CCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCC-Ch-hHHH--hhCCeec-------CCHHhh-cccCCEEEEcCCCC
Q 027408 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKM-DP-QLEK--ETGAKFE-------EDLDTM-LPKCDIVVVNTPLT 103 (223)
Q Consensus 36 g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~-~~-~~~~--~~g~~~~-------~~l~e~-l~~aDvVv~~~p~~ 103 (223)
.++|.|+|+|.+|+.+++.|...|.+|.++++++. .. .... ..++... ..++++ +.++|.|+++++..
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d 82 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDND 82 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCCh
Confidence 46799999999999999999999999999998631 11 1111 1233221 123344 78899999999855
Q ss_pred hhhhhcccHHHHhcCCCCcEEEEc
Q 027408 104 EKTRGMFDKDRIAKMKKGVLIVNN 127 (223)
Q Consensus 104 ~~t~~~i~~~~~~~mk~ga~ivn~ 127 (223)
+.+ +.-....+.+.+...++..
T Consensus 83 ~~n--~~~~~~a~~~~~~~~ii~~ 104 (153)
T 1id1_A 83 ADN--AFVVLSAKDMSSDVKTVLA 104 (153)
T ss_dssp HHH--HHHHHHHHHHTSSSCEEEE
T ss_pred HHH--HHHHHHHHHHCCCCEEEEE
Confidence 433 2224455555444444443
No 222
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=98.06 E-value=7.5e-06 Score=70.19 Aligned_cols=94 Identities=19% Similarity=0.246 Sum_probs=59.5
Q ss_pred CEEEEEcccHHHHHHHHHHccCCC--eEEEEcCCCCChhH-HHhh--------CCe-ecCCHHhhcccCCEEEEcCCCCh
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQL-EKET--------GAK-FEEDLDTMLPKCDIVVVNTPLTE 104 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~~-~~~~--------g~~-~~~~l~e~l~~aDvVv~~~p~~~ 104 (223)
++|+|||.|.||..+|..+...|. +|.++|+++...+. ...+ ... ...+ .+.+++||+|++++|...
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d-~~~~~~aDvViiav~~~~ 79 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD-YADLKGSDVVIVAAGVPQ 79 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC-GGGGTTCSEEEECCCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeCC-HHHhCCCCEEEEccCCCC
Confidence 589999999999999999988888 99999997522221 1111 111 1234 356789999999998533
Q ss_pred hh---h-hc------ccHHHHhcC---CCCcEEEEcCCCC
Q 027408 105 KT---R-GM------FDKDRIAKM---KKGVLIVNNARGA 131 (223)
Q Consensus 105 ~t---~-~~------i~~~~~~~m---k~ga~ivn~srg~ 131 (223)
.. + .+ +-.+.++.+ .+++++|+++.+.
T Consensus 80 ~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~ 119 (319)
T 1a5z_A 80 KPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPV 119 (319)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcH
Confidence 10 0 00 112222222 4788888876544
No 223
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=98.06 E-value=7.1e-06 Score=70.09 Aligned_cols=65 Identities=23% Similarity=0.304 Sum_probs=48.0
Q ss_pred CEEEEEcccHHHHHHHHHHcc--CCCeEEEEcCCCCChhHHH---hh-------C--CeecCCHHhhcccCCEEEEcCCC
Q 027408 37 KTVGTVGCGRIGKLLLQRLKP--FNCNLLYHDRVKMDPQLEK---ET-------G--AKFEEDLDTMLPKCDIVVVNTPL 102 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~--~G~~V~~~d~~~~~~~~~~---~~-------g--~~~~~~l~e~l~~aDvVv~~~p~ 102 (223)
++|+|||.|.+|..+|..+.. .|.+|..+|+++...+... .. . +....++++ +++||+|++++|.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~aDvViiav~~ 79 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TANSDIVIITAGL 79 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTTCSEEEECCSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCCCCEEEEeCCC
Confidence 589999999999999999976 5789999999764322111 00 1 223356766 8999999999973
No 224
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=98.06 E-value=8.3e-06 Score=72.79 Aligned_cols=107 Identities=17% Similarity=0.194 Sum_probs=67.5
Q ss_pred CEEEEEcccHHHH-HHHHHHccC-CCeE-EEEcCCCCC-hhHHHhhCCe-----ecCCHHhhcc--cCCEEEEcCCCChh
Q 027408 37 KTVGTVGCGRIGK-LLLQRLKPF-NCNL-LYHDRVKMD-PQLEKETGAK-----FEEDLDTMLP--KCDIVVVNTPLTEK 105 (223)
Q Consensus 37 ~~igIiG~G~iG~-~iA~~l~~~-G~~V-~~~d~~~~~-~~~~~~~g~~-----~~~~l~e~l~--~aDvVv~~~p~~~~ 105 (223)
.+|||||+|.||+ .+++.+... ++++ .++|+++.. .+.++.+++. .+.++++++. +.|+|++++|....
T Consensus 84 irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~ll~~~~vD~V~iatp~~~h 163 (433)
T 1h6d_A 84 FGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSLH 163 (433)
T ss_dssp EEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECSCGGGH
T ss_pred eEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCcccccccCCHHHHhcCCCCCEEEEcCCchhH
Confidence 5899999999997 899988765 5675 588886532 2334556664 4678999996 79999999993322
Q ss_pred hhhcccHHHHhcCCCCcEEEEcC--CCCccCHHHHHHHHHhCCcc
Q 027408 106 TRGMFDKDRIAKMKKGVLIVNNA--RGAIMDTQAVVDACSSGHIA 148 (223)
Q Consensus 106 t~~~i~~~~~~~mk~ga~ivn~s--rg~~vd~~al~~~L~~g~i~ 148 (223)
-+-....++.|..++.-- .-.+-+.+.|.++.++..+.
T Consensus 164 -----~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~ 203 (433)
T 1h6d_A 164 -----AEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKK 203 (433)
T ss_dssp -----HHHHHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHTCC
T ss_pred -----HHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHhCCe
Confidence 233334455666444321 11222334566655554433
No 225
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=98.05 E-value=7.9e-06 Score=65.82 Aligned_cols=90 Identities=18% Similarity=0.129 Sum_probs=58.5
Q ss_pred CEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhH-HHhhCCeec----CC---HHhh-cccCCEEEEcCCCChhhh
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQL-EKETGAKFE----ED---LDTM-LPKCDIVVVNTPLTEKTR 107 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~-~~~~g~~~~----~~---l~e~-l~~aDvVv~~~p~~~~t~ 107 (223)
++|.|+|+|.+|+.+|+.|...|.+|.++|+++...+. ....+...+ .+ ++++ +.++|+|+++++....+
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n- 79 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDEVN- 79 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHHHH-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcHHH-
Confidence 47999999999999999999999999999987533222 233344321 12 3333 67899999999855443
Q ss_pred hcccHHHHhcCCCCcEEEEcC
Q 027408 108 GMFDKDRIAKMKKGVLIVNNA 128 (223)
Q Consensus 108 ~~i~~~~~~~mk~ga~ivn~s 128 (223)
.+-....+.+.+...+|-..
T Consensus 80 -~~~~~~a~~~~~~~~iia~~ 99 (218)
T 3l4b_C 80 -LFIAQLVMKDFGVKRVVSLV 99 (218)
T ss_dssp -HHHHHHHHHTSCCCEEEECC
T ss_pred -HHHHHHHHHHcCCCeEEEEE
Confidence 22244444433444444333
No 226
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=98.04 E-value=4.5e-06 Score=70.44 Aligned_cols=97 Identities=19% Similarity=0.241 Sum_probs=65.3
Q ss_pred cCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCCh-hHHHhhCC---------eecCCHHhhcccCCEEEEcCC
Q 027408 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDP-QLEKETGA---------KFEEDLDTMLPKCDIVVVNTP 101 (223)
Q Consensus 32 ~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~-~~~~~~g~---------~~~~~l~e~l~~aDvVv~~~p 101 (223)
.++.|+++.|+|.|.+|+++|+.|...| +|++++|+.... +.++.++. ....++.+.+.++|+||.++|
T Consensus 124 ~~l~~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~DilVn~ag 202 (287)
T 1nvt_A 124 GRVKDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATP 202 (287)
T ss_dssp CCCCSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSC
T ss_pred CCcCCCEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeHHHhhCCCCEEEECCC
Confidence 4688999999999999999999999999 999999974221 22222110 011233566788999999998
Q ss_pred CChhhh---hcccHHHHhcCCCCcEEEEcCCCC
Q 027408 102 LTEKTR---GMFDKDRIAKMKKGVLIVNNARGA 131 (223)
Q Consensus 102 ~~~~t~---~~i~~~~~~~mk~ga~ivn~srg~ 131 (223)
...... ..+. ..+.++++.+++|+.-..
T Consensus 203 ~~~~~~~~~~~~~--~~~~l~~~~~v~Dv~y~p 233 (287)
T 1nvt_A 203 IGMYPNIDVEPIV--KAEKLREDMVVMDLIYNP 233 (287)
T ss_dssp TTCTTCCSSCCSS--CSTTCCSSSEEEECCCSS
T ss_pred CCCCCCCCCCCCC--CHHHcCCCCEEEEeeeCC
Confidence 543210 0120 134577888888887643
No 227
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=98.04 E-value=2.9e-05 Score=66.26 Aligned_cols=84 Identities=13% Similarity=0.103 Sum_probs=59.0
Q ss_pred CEEEEEcc-cHHHHHHHHHHccCCCe-EEEEcCCCCChhHHHhh-CCeecCCHHhhc----------ccCCEEEEcCCCC
Q 027408 37 KTVGTVGC-GRIGKLLLQRLKPFNCN-LLYHDRVKMDPQLEKET-GAKFEEDLDTML----------PKCDIVVVNTPLT 103 (223)
Q Consensus 37 ~~igIiG~-G~iG~~iA~~l~~~G~~-V~~~d~~~~~~~~~~~~-g~~~~~~l~e~l----------~~aDvVv~~~p~~ 103 (223)
.+|||||+ |.||+..++.++..+.+ +.++|+++.....++.+ +...+.++++++ ++.|+|++++|.
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~vD~V~I~tP~- 82 (312)
T 3o9z_A 4 TRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVGLVDSFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIASPN- 82 (312)
T ss_dssp CEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESCHHHHHHHHHHHHHTTCCCSEEEECSCG-
T ss_pred eEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCceeCCHHHHHHHhhhhcccCCCCcEEEECCCc-
Confidence 58999999 78999999999888887 45888876544333333 456678999988 579999999993
Q ss_pred hhhhhcccHHHHhcCCCCcEEE
Q 027408 104 EKTRGMFDKDRIAKMKKGVLIV 125 (223)
Q Consensus 104 ~~t~~~i~~~~~~~mk~ga~iv 125 (223)
.++. +-....++.|..++
T Consensus 83 -~~H~---~~~~~al~aGkhVl 100 (312)
T 3o9z_A 83 -HLHY---PQIRMALRLGANAL 100 (312)
T ss_dssp -GGHH---HHHHHHHHTTCEEE
T ss_pred -hhhH---HHHHHHHHCCCeEE
Confidence 3222 23333444555544
No 228
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=98.02 E-value=7.6e-06 Score=70.52 Aligned_cols=66 Identities=17% Similarity=0.266 Sum_probs=50.5
Q ss_pred CEEEEEcccHHHHH-HHHHHccC-CCeEE-EEcCCCC-ChhHHHhhCCe-ecCCHHhhcc--cCCEEEEcCCC
Q 027408 37 KTVGTVGCGRIGKL-LLQRLKPF-NCNLL-YHDRVKM-DPQLEKETGAK-FEEDLDTMLP--KCDIVVVNTPL 102 (223)
Q Consensus 37 ~~igIiG~G~iG~~-iA~~l~~~-G~~V~-~~d~~~~-~~~~~~~~g~~-~~~~l~e~l~--~aDvVv~~~p~ 102 (223)
.+|||||+|.||+. ++..++.. +++|. ++|+++. ..+.++++++. .+++++++++ +.|+|++++|.
T Consensus 24 irigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~I~tP~ 96 (350)
T 4had_A 24 LRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFGSYEEMLASDVIDAVYIPLPT 96 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCSSCSEEEECSCG
T ss_pred cEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeCCHHHHhcCCCCCEEEEeCCC
Confidence 48999999999986 46667655 67765 7888752 34456678874 5789999995 58999999993
No 229
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=98.02 E-value=2.2e-05 Score=68.28 Aligned_cols=105 Identities=12% Similarity=0.224 Sum_probs=65.9
Q ss_pred CEEEEEcccHHHHH-HHHHHccC-CCeEE-EEcCCCCChhHHHhh-CCeecCCHHhhcc--cCCEEEEcCCCChhhhhcc
Q 027408 37 KTVGTVGCGRIGKL-LLQRLKPF-NCNLL-YHDRVKMDPQLEKET-GAKFEEDLDTMLP--KCDIVVVNTPLTEKTRGMF 110 (223)
Q Consensus 37 ~~igIiG~G~iG~~-iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~-g~~~~~~l~e~l~--~aDvVv~~~p~~~~t~~~i 110 (223)
.+|||||+|.||+. .+..++.. +++|. ++|+++. ...+.. +...+.++++++. +.|+|++|+|.....
T Consensus 8 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~--~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~H~---- 81 (364)
T 3e82_A 8 INIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEE--KVKRDLPDVTVIASPEAAVQHPDVDLVVIASPNATHA---- 81 (364)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHH--HHHHHCTTSEEESCHHHHHTCTTCSEEEECSCGGGHH----
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHH--HHHhhCCCCcEECCHHHHhcCCCCCEEEEeCChHHHH----
Confidence 47999999999997 77777665 77865 7788652 222333 5667789999997 789999999943222
Q ss_pred cHHHHhcCCCCcEEEEcC--CCCccCHHHHHHHHHhCCcc
Q 027408 111 DKDRIAKMKKGVLIVNNA--RGAIMDTQAVVDACSSGHIA 148 (223)
Q Consensus 111 ~~~~~~~mk~ga~ivn~s--rg~~vd~~al~~~L~~g~i~ 148 (223)
+-....++.|..++.-- .-.+-+.++|.++.++..+.
T Consensus 82 -~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~ 120 (364)
T 3e82_A 82 -PLARLALNAGKHVVVDKPFTLDMQEARELIALAEEKQRL 120 (364)
T ss_dssp -HHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCC
T ss_pred -HHHHHHHHCCCcEEEeCCCcCCHHHHHHHHHHHHHhCCe
Confidence 23334445555554422 12223344455555554443
No 230
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=98.02 E-value=1.2e-05 Score=69.80 Aligned_cols=64 Identities=20% Similarity=0.242 Sum_probs=49.9
Q ss_pred CEEEEEcccHHHHH-HHHHHccC-CCeEE-EEcCCCCChhHHHhh-CCeecCCHHhhccc--CCEEEEcCCC
Q 027408 37 KTVGTVGCGRIGKL-LLQRLKPF-NCNLL-YHDRVKMDPQLEKET-GAKFEEDLDTMLPK--CDIVVVNTPL 102 (223)
Q Consensus 37 ~~igIiG~G~iG~~-iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~-g~~~~~~l~e~l~~--aDvVv~~~p~ 102 (223)
.+|||||+|.||+. .+..++.. +++|. ++|+++.. .++++ +...+.++++++.+ .|+|++|+|.
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~--~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~ 75 (362)
T 3fhl_A 6 IKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKEL--SKERYPQASIVRSFKELTEDPEIDLIVVNTPD 75 (362)
T ss_dssp EEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCG--GGTTCTTSEEESCSHHHHTCTTCCEEEECSCG
T ss_pred eEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHH--HHHhCCCCceECCHHHHhcCCCCCEEEEeCCh
Confidence 58999999999997 77777665 77764 78887532 34445 56677899999976 8999999993
No 231
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=98.00 E-value=1.4e-05 Score=71.43 Aligned_cols=111 Identities=18% Similarity=0.180 Sum_probs=79.2
Q ss_pred ccCCCCCEEEEEcccHHHHHHHHHHccCCC---eEEEEc----CC--C-CChh---HH---Hhh----CCe-ecCCHHhh
Q 027408 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNC---NLLYHD----RV--K-MDPQ---LE---KET----GAK-FEEDLDTM 89 (223)
Q Consensus 31 ~~~l~g~~igIiG~G~iG~~iA~~l~~~G~---~V~~~d----~~--~-~~~~---~~---~~~----g~~-~~~~l~e~ 89 (223)
+..+.+++|.|+|.|..|+++++.|...|. +|+++| |+ . +..+ .. ..+ +.. ...++.+.
T Consensus 181 g~~l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a~~~~~~~~~~~L~e~ 260 (439)
T 2dvm_A 181 GKKISEITLALFGAGAAGFATLRILTEAGVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLLKKTNGENIEGGPQEA 260 (439)
T ss_dssp TCCTTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHHTTSCTTCCCSSHHHH
T ss_pred CCCccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHhhccccccccccHHHH
Confidence 456899999999999999999999999998 799999 76 1 1111 11 011 110 13568899
Q ss_pred cccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCC
Q 027408 90 LPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGH 146 (223)
Q Consensus 90 l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~ 146 (223)
++++|+||.++|..+ +++.++.++.|+++.++++++... .+.-+.++.+.|.
T Consensus 261 l~~aDVlInaT~~~~---G~~~~e~v~~m~~~~iVfDLynP~--~t~~~~~A~~~G~ 312 (439)
T 2dvm_A 261 LKDADVLISFTRPGP---GVIKPQWIEKMNEDAIVFPLANPV--PEILPEEAKKAGA 312 (439)
T ss_dssp HTTCSEEEECSCCCS---SSSCHHHHTTSCTTCEEEECCSSS--CSSCHHHHHHHTC
T ss_pred hccCCEEEEcCCCcc---CCCChHHHHhcCCCCEEEECCCCC--CcchHHHHHHcCC
Confidence 999999999998421 456667788899999999995543 3444555555554
No 232
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=97.99 E-value=1e-05 Score=70.93 Aligned_cols=110 Identities=14% Similarity=0.103 Sum_probs=69.8
Q ss_pred CCEEEEEcccHHHHHHHHHHccC--CCeEE-EEcCCC-CChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhcc-
Q 027408 36 GKTVGTVGCGRIGKLLLQRLKPF--NCNLL-YHDRVK-MDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMF- 110 (223)
Q Consensus 36 g~~igIiG~G~iG~~iA~~l~~~--G~~V~-~~d~~~-~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i- 110 (223)
-.+|||||+| +|+..++.++.. ++++. ++|++. +..+.++++|+..++++++++.+.|++++++|.... .-.
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~~gv~~~~~~~~l~~~~D~v~i~~p~~~h--~~~~ 83 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAFGIPLYTSPEQITGMPDIACIVVRSTVA--GGAG 83 (372)
T ss_dssp CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHHTTCCEESSGGGCCSCCSEEEECCC--CT--TSHH
T ss_pred CCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHHhCCCEECCHHHHhcCCCEEEEECCCccc--chhH
Confidence 3589999999 799988888765 57755 778876 344567788998889999999999999999993321 100
Q ss_pred cHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCcc
Q 027408 111 DKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (223)
Q Consensus 111 ~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~ 148 (223)
.+-..+.|+.|..++.=--=..-+.++|+++-++..+.
T Consensus 84 ~~~a~~al~aGkhVl~EKPl~~~ea~~l~~~A~~~g~~ 121 (372)
T 4gmf_A 84 TQLARHFLARGVHVIQEHPLHPDDISSLQTLAQEQGCC 121 (372)
T ss_dssp HHHHHHHHHTTCEEEEESCCCHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHcCCcEEEecCCCHHHHHHHHHHHHHcCCE
Confidence 12233344455544332111222344555555555544
No 233
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=97.99 E-value=1.7e-05 Score=67.87 Aligned_cols=66 Identities=17% Similarity=0.209 Sum_probs=51.6
Q ss_pred CEEEEEcc-cHHHHHHHHHHccCCCe-EEEEcCCCCChhHHHhh-CCeecCCHHhhc-----------ccCCEEEEcCCC
Q 027408 37 KTVGTVGC-GRIGKLLLQRLKPFNCN-LLYHDRVKMDPQLEKET-GAKFEEDLDTML-----------PKCDIVVVNTPL 102 (223)
Q Consensus 37 ~~igIiG~-G~iG~~iA~~l~~~G~~-V~~~d~~~~~~~~~~~~-g~~~~~~l~e~l-----------~~aDvVv~~~p~ 102 (223)
.+|||||+ |.||+..++.++..+.+ +.++|+++.....++.+ +...++++++++ ++.|+|++++|.
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~~vD~V~I~tP~ 83 (318)
T 3oa2_A 4 KNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSVGIIDSISPQSEFFTEFEFFLDHASNLKRDSATALDYVSICSPN 83 (318)
T ss_dssp CEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESSHHHHHHHHHHHTTSTTTSCCEEEECSCG
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCcEECCHHHHHHhhhhhhhccCCCCcEEEECCCc
Confidence 58999999 78999999999888887 45888876544333333 456678899987 568999999993
No 234
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=97.99 E-value=2.4e-05 Score=67.02 Aligned_cols=73 Identities=18% Similarity=0.193 Sum_probs=53.5
Q ss_pred ccCCCCCEEEEEcccHHHHHHHHHHccCCC-eEEEEcCCCCChh----HHHhh----CC--e--ecCCH---HhhcccCC
Q 027408 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQ----LEKET----GA--K--FEEDL---DTMLPKCD 94 (223)
Q Consensus 31 ~~~l~g~~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~----~~~~~----g~--~--~~~~l---~e~l~~aD 94 (223)
+.++.|+++.|+|.|.+|++++..|...|. +|.+++|+....+ .++++ +. . ...++ .+.+.++|
T Consensus 143 ~~~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~D 222 (312)
T 3t4e_A 143 GFDMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASAD 222 (312)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCS
T ss_pred CCCcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCce
Confidence 356899999999999999999999999998 7999999832211 22221 21 1 22343 55678899
Q ss_pred EEEEcCCCC
Q 027408 95 IVVVNTPLT 103 (223)
Q Consensus 95 vVv~~~p~~ 103 (223)
+||.++|..
T Consensus 223 iIINaTp~G 231 (312)
T 3t4e_A 223 ILTNGTKVG 231 (312)
T ss_dssp EEEECSSTT
T ss_pred EEEECCcCC
Confidence 999999943
No 235
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=97.98 E-value=1.3e-05 Score=69.26 Aligned_cols=67 Identities=16% Similarity=0.165 Sum_probs=49.0
Q ss_pred CEEEEEcccHHHHH-HHHHHccC-CCeEE-EEcCCCCChhHHHhhCCeecCCHHhhccc--CCEEEEcCCCCh
Q 027408 37 KTVGTVGCGRIGKL-LLQRLKPF-NCNLL-YHDRVKMDPQLEKETGAKFEEDLDTMLPK--CDIVVVNTPLTE 104 (223)
Q Consensus 37 ~~igIiG~G~iG~~-iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~g~~~~~~l~e~l~~--aDvVv~~~p~~~ 104 (223)
.+|||||+|.||+. .+..++.. +++|. ++|+++...+ ....+...++++++++.+ .|+|++|+|...
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~-~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~ 79 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVH-ADWPAIPVVSDPQMLFNDPSIDLIVIPTPNDT 79 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHH-TTCSSCCEESCHHHHHHCSSCCEEEECSCTTT
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHH-hhCCCCceECCHHHHhcCCCCCEEEEeCChHH
Confidence 58999999999997 78877765 67765 7887642111 111245667899999965 899999999543
No 236
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=97.98 E-value=6.9e-06 Score=73.01 Aligned_cols=91 Identities=14% Similarity=0.189 Sum_probs=63.1
Q ss_pred CCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeec----CCH---Hhh-cccCCEEEEcCCCChhhh
Q 027408 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE----EDL---DTM-LPKCDIVVVNTPLTEKTR 107 (223)
Q Consensus 36 g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~----~~l---~e~-l~~aDvVv~~~p~~~~t~ 107 (223)
+.+|.|+|+|++|+.+|+.|...|.+|+++|+++...+..+..|+..+ ++. +++ +.++|+|+++++..+.+.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~n~ 83 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTNL 83 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChHHHH
Confidence 457999999999999999999999999999997644444555565321 222 233 578999999999654443
Q ss_pred hcccHHHHhcCCCCcEEEEcC
Q 027408 108 GMFDKDRIAKMKKGVLIVNNA 128 (223)
Q Consensus 108 ~~i~~~~~~~mk~ga~ivn~s 128 (223)
.+ ....+.+.+...+|--+
T Consensus 84 ~i--~~~ar~~~p~~~Iiara 102 (413)
T 3l9w_A 84 QL--TEMVKEHFPHLQIIARA 102 (413)
T ss_dssp HH--HHHHHHHCTTCEEEEEE
T ss_pred HH--HHHHHHhCCCCeEEEEE
Confidence 22 45555666665554433
No 237
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=97.97 E-value=3e-05 Score=65.04 Aligned_cols=67 Identities=21% Similarity=0.219 Sum_probs=50.8
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCC-eEEEEcCCC-CChhHHHhhCCeecCCHHhhcccCCEEEEcCCCC
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVK-MDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLT 103 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~~-~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~ 103 (223)
.++++.|+|.|.+|++++..|...|. +|.+++|+. +..+.++.++.....++. +.++|+||.++|..
T Consensus 118 ~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~~~~~~~--~~~~DivInaTp~g 186 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLE--NQQADILVNVTSIG 186 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCT--TCCCSEEEECSSTT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCccchhhh--cccCCEEEECCCCC
Confidence 57899999999999999999999998 799999975 233444455543322222 46899999999954
No 238
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=97.97 E-value=6.9e-06 Score=71.41 Aligned_cols=85 Identities=22% Similarity=0.249 Sum_probs=57.4
Q ss_pred CCEEEEEcccHHHHH-HHHHHccC-CCeEE-EEcCCCCCh-hHHHhh-CCeecCCHHhhccc--CCEEEEcCCCChhhhh
Q 027408 36 GKTVGTVGCGRIGKL-LLQRLKPF-NCNLL-YHDRVKMDP-QLEKET-GAKFEEDLDTMLPK--CDIVVVNTPLTEKTRG 108 (223)
Q Consensus 36 g~~igIiG~G~iG~~-iA~~l~~~-G~~V~-~~d~~~~~~-~~~~~~-g~~~~~~l~e~l~~--aDvVv~~~p~~~~t~~ 108 (223)
..+|||||+|.||+. +++.++.. +.++. ++|+++... +.++.+ +...++++++++++ .|+|++|+| +.++.
T Consensus 5 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp--~~~H~ 82 (359)
T 3m2t_A 5 LIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISDIPVLDNVPAMLNQVPLDAVVMAGP--PQLHF 82 (359)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGTSCSCCEESSHHHHHHHSCCSEEEECSC--HHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHhcCCCcccCCHHHHhcCCCCCEEEEcCC--cHHHH
Confidence 358999999999995 88888766 67765 889875322 233344 34567899999975 599999999 33322
Q ss_pred cccHHHHhcCCCCcEEE
Q 027408 109 MFDKDRIAKMKKGVLIV 125 (223)
Q Consensus 109 ~i~~~~~~~mk~ga~iv 125 (223)
+-....++.|..++
T Consensus 83 ---~~~~~al~aGkhVl 96 (359)
T 3m2t_A 83 ---EMGLLAMSKGVNVF 96 (359)
T ss_dssp ---HHHHHHHHTTCEEE
T ss_pred ---HHHHHHHHCCCeEE
Confidence 23334445555444
No 239
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=97.95 E-value=4.1e-05 Score=65.78 Aligned_cols=64 Identities=22% Similarity=0.272 Sum_probs=47.9
Q ss_pred CCEEEEEcccHHHHHHHHHHccCCC-eEEEEcCCCCChhH-----HH---hh--C--CeecCCHHhhcccCCEEEEcC
Q 027408 36 GKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQL-----EK---ET--G--AKFEEDLDTMLPKCDIVVVNT 100 (223)
Q Consensus 36 g~~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~-----~~---~~--g--~~~~~~l~e~l~~aDvVv~~~ 100 (223)
.++|+|||.|.+|..+|..+...|+ +|..+|+++...+. .. .. . +....++ +.+++||+|++++
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi~a~ 80 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVIVTA 80 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeC
Confidence 3689999999999999999988887 89999987642221 11 01 1 2233567 7789999999998
No 240
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=97.94 E-value=0.00014 Score=61.83 Aligned_cols=96 Identities=17% Similarity=0.111 Sum_probs=73.8
Q ss_pred CCCCCEEEEEcc-cHHHHHHHHHHccCCCeEEEEcCCCC--ChhHHHhhCCeecCCHHhhcccCCEEEEcCCC-------
Q 027408 33 DLEGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKM--DPQLEKETGAKFEEDLDTMLPKCDIVVVNTPL------- 102 (223)
Q Consensus 33 ~l~g~~igIiG~-G~iG~~iA~~l~~~G~~V~~~d~~~~--~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~------- 102 (223)
.+.|.+|+++|= +++.++++..+..+|++|.+..|... ..+......+....+++++++++|+|....=.
T Consensus 151 ~l~gl~ia~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~d~~eav~~aDvvy~~~~~smg~~~~ 230 (301)
T 2ef0_A 151 GLAGLEVAWVGDGNNVLNSLLEVAPLAGLKVRVATPKGYEPDPGLLKRANAFFTHDPKEAALGAHALYTDVWTSMGQEAE 230 (301)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHTCEEESCHHHHHTTCSEEEECCCC-------
T ss_pred CcCCcEEEEECCCchhHHHHHHHHHHcCCEEEEECCchhcCCHHHHhhceeEEECCHHHHhcCCCEEEecCcccCCcccc
Confidence 589999999996 99999999999999999999998652 22233333466678999999999999884320
Q ss_pred Chh-----hhhcccHHHHhcCCCCcEEEEcC
Q 027408 103 TEK-----TRGMFDKDRIAKMKKGVLIVNNA 128 (223)
Q Consensus 103 ~~~-----t~~~i~~~~~~~mk~ga~ivn~s 128 (223)
..+ ...-++.+.++.+|++++|..+.
T Consensus 231 ~~~~~~~~~~y~v~~e~l~~a~~~ai~mHpl 261 (301)
T 2ef0_A 231 REKRLRDFQGFQVNGELLKLLRPEGVFLHCL 261 (301)
T ss_dssp -CHHHHHTTTCCBCHHHHTTSCTTCEEEECS
T ss_pred hhHHHHHhhccccCHHHHHhcCCCcEEECCC
Confidence 011 12457889999999999998875
No 241
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=97.93 E-value=1.3e-05 Score=69.85 Aligned_cols=89 Identities=21% Similarity=0.171 Sum_probs=57.4
Q ss_pred CCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhh------CCeecCCHHhhcccCCEEEEcCCCChhhh
Q 027408 34 LEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKET------GAKFEEDLDTMLPKCDIVVVNTPLTEKTR 107 (223)
Q Consensus 34 l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~------g~~~~~~l~e~l~~aDvVv~~~p~~~~t~ 107 (223)
=+.+||+|+|+|.+|+.+|+.|+. ..+|.+.|++....+..... .+...+++.++++++|+|+.++|.. ..
T Consensus 14 g~~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~--~~ 90 (365)
T 3abi_A 14 GRHMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGF--LG 90 (365)
T ss_dssp --CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGG--GH
T ss_pred CCccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEecCCc--cc
Confidence 345689999999999999999976 47899999865333322221 1112235667889999999999932 11
Q ss_pred hcccHHHHhcCCCCcEEEEcC
Q 027408 108 GMFDKDRIAKMKKGVLIVNNA 128 (223)
Q Consensus 108 ~~i~~~~~~~mk~ga~ivn~s 128 (223)
. .-.-..++.|..+++++
T Consensus 91 ~---~v~~~~~~~g~~yvD~s 108 (365)
T 3abi_A 91 F---KSIKAAIKSKVDMVDVS 108 (365)
T ss_dssp H---HHHHHHHHHTCEEEECC
T ss_pred c---hHHHHHHhcCcceEeee
Confidence 1 11223345566777765
No 242
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=97.92 E-value=8.2e-06 Score=72.03 Aligned_cols=66 Identities=20% Similarity=0.321 Sum_probs=50.4
Q ss_pred CEEEEEcccHHHHHHHHHHccC---------CCeEE-EEcCCCC-ChhHHHhhCC-eecCCHHhhcc--cCCEEEEcCCC
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPF---------NCNLL-YHDRVKM-DPQLEKETGA-KFEEDLDTMLP--KCDIVVVNTPL 102 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~---------G~~V~-~~d~~~~-~~~~~~~~g~-~~~~~l~e~l~--~aDvVv~~~p~ 102 (223)
.+|||||+|.||+..+..++.. +.+|. ++|+++. ..+.++++++ ..+++++++++ +.|+|++++|.
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~~y~d~~~ll~~~~vD~V~I~tp~ 106 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAYGDWRELVNDPQVDVVDITSPN 106 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCG
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCeEECCHHHHhcCCCCCEEEECCCc
Confidence 4899999999999988888653 34644 7788752 3345567777 46789999995 58999999993
No 243
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=97.92 E-value=7.8e-06 Score=71.73 Aligned_cols=66 Identities=20% Similarity=0.290 Sum_probs=52.6
Q ss_pred CEEEEEccc-HHHHHHHHHHccC-CCeEE-EEcCCCC-ChhHHHhhCCeecCCHHhhccc--CCEEEEcCCC
Q 027408 37 KTVGTVGCG-RIGKLLLQRLKPF-NCNLL-YHDRVKM-DPQLEKETGAKFEEDLDTMLPK--CDIVVVNTPL 102 (223)
Q Consensus 37 ~~igIiG~G-~iG~~iA~~l~~~-G~~V~-~~d~~~~-~~~~~~~~g~~~~~~l~e~l~~--aDvVv~~~p~ 102 (223)
.+|||||+| .+|..++..+... ++++. ++|+++. ..+.++++++..+.++++++++ .|+|++++|.
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~ell~~~~vD~V~i~tp~ 74 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKEYGIPVFATLAEMMQHVQMDAVYIASPH 74 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHHHTCCEESSHHHHHHHSCCSEEEECSCG
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeECCHHHHHcCCCCCEEEEcCCc
Confidence 479999999 9999999998765 66754 7888653 2334566788888899999974 9999999993
No 244
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=97.91 E-value=1.2e-05 Score=69.24 Aligned_cols=67 Identities=24% Similarity=0.401 Sum_probs=52.1
Q ss_pred CCEEEEEccc-HHHHHHHHHHccC--CCeE-EEEcCCCCC-hhHHHhhCC-eecCCHHhhcc--cCCEEEEcCCC
Q 027408 36 GKTVGTVGCG-RIGKLLLQRLKPF--NCNL-LYHDRVKMD-PQLEKETGA-KFEEDLDTMLP--KCDIVVVNTPL 102 (223)
Q Consensus 36 g~~igIiG~G-~iG~~iA~~l~~~--G~~V-~~~d~~~~~-~~~~~~~g~-~~~~~l~e~l~--~aDvVv~~~p~ 102 (223)
-.+|||||+| .+|+..+..++.. ++++ .++|+++.. .+.++++++ ..+++++++++ +.|+|++++|.
T Consensus 18 ~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~ 92 (340)
T 1zh8_A 18 KIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLESGLVDAVDLTLPV 92 (340)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESCHHHHHHSSCCSEEEECCCG
T ss_pred ceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCCc
Confidence 3589999999 8999999999876 4675 588887532 234556676 66789999985 58999999993
No 245
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=97.91 E-value=1.7e-05 Score=67.59 Aligned_cols=112 Identities=14% Similarity=0.192 Sum_probs=66.0
Q ss_pred CEEEEEcccHHHHHHHHHHccCCC--eEEEEcCCCCChh-HHHhh--C------Cee-cCCHHhhcccCCEEEEcCCCCh
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQ-LEKET--G------AKF-EEDLDTMLPKCDIVVVNTPLTE 104 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~-~~~~~--g------~~~-~~~l~e~l~~aDvVv~~~p~~~ 104 (223)
++|+|||.|.+|..+|..+...|. +|..+|+++...+ ...++ . ... ..+ .+.+++||+|+++++...
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~-~~a~~~aDvVIi~~~~~~ 79 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGG-HSELADAQVVILTAGANQ 79 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEEC-GGGGTTCSEEEECC----
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECC-HHHhCCCCEEEEcCCCCC
Confidence 589999999999999999998888 8999998642111 11111 1 111 123 356889999999995322
Q ss_pred h-----------hhhc---ccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEE
Q 027408 105 K-----------TRGM---FDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGY 150 (223)
Q Consensus 105 ~-----------t~~~---i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a 150 (223)
. +..+ +.++.-+ ..+++++++++.+.-+....+.+.....++.|.
T Consensus 80 ~~g~~r~dl~~~n~~i~~~i~~~i~~-~~p~~~vi~~tNP~~~~~~~~~~~~~~~rviG~ 138 (304)
T 2v6b_A 80 KPGESRLDLLEKNADIFRELVPQITR-AAPDAVLLVTSNPVDLLTDLATQLAPGQPVIGS 138 (304)
T ss_dssp --------CHHHHHHHHHHHHHHHHH-HCSSSEEEECSSSHHHHHHHHHHHSCSSCEEEC
T ss_pred CCCCcHHHHHHhHHHHHHHHHHHHHH-hCCCeEEEEecCchHHHHHHHHHhCChhcEEeC
Confidence 1 1111 1122222 358899988766543333444444444455444
No 246
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=97.91 E-value=1.6e-05 Score=69.84 Aligned_cols=158 Identities=15% Similarity=0.171 Sum_probs=101.3
Q ss_pred ccCCCCCEEEEEcccHHHHHHHHHHccCCC-eEEEEcCCC-C---C----h----hHHHhhC-CeecCCHHhhcccCCEE
Q 027408 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVK-M---D----P----QLEKETG-AKFEEDLDTMLPKCDIV 96 (223)
Q Consensus 31 ~~~l~g~~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~~-~---~----~----~~~~~~g-~~~~~~l~e~l~~aDvV 96 (223)
+..+...+|.|+|.|..|..+|+.+...|. +|+.+|++. . . . ..+.... .....+|+|+++.+|++
T Consensus 183 g~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~ADV~ 262 (398)
T 2a9f_A 183 KKSLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEGADIF 262 (398)
T ss_dssp TCCTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHTTCSE
T ss_pred CCCCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhccCCEE
Confidence 557899999999999999999999999999 899999863 0 0 0 1112111 11134699999999998
Q ss_pred EEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEeeCCCCCCCCCCCCccCCCCeEEcc
Q 027408 97 VVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTP 176 (223)
Q Consensus 97 v~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lDv~~~ep~~~~~~l~~~~nv~~tP 176 (223)
+=+. ..+++.++.++.|+++.+|+.+|.... |..=.++.+.|+... +.= ..+.| -+..|+++-|
T Consensus 263 IG~S-----apgl~T~EmVk~Ma~~pIIfalsNPt~--E~~pe~a~~~g~~i~-atG-------rs~~p-~Q~NN~~~FP 326 (398)
T 2a9f_A 263 IGVS-----APGVLKAEWISKMAARPVIFAMANPIP--EIYPDEALEAGAYIV-GTG-------RSDFP-NQINNVLAFP 326 (398)
T ss_dssp EECC-----STTCCCHHHHHTSCSSCEEEECCSSSC--SSCHHHHHTTTCSEE-EES-------CTTSS-SBCCGGGTHH
T ss_pred EecC-----CCCCCCHHHHHhhCCCCEEEECCCCCc--cCCHHHHHHhCCeEE-EeC-------CCCCC-CcCCceeEcc
Confidence 7663 257899999999999999999998764 222222333455221 211 11112 2345677766
Q ss_pred CCCCCc-----HHHHHHHHHHHHHHHHHHHcCC
Q 027408 177 HVSGTT-----IDAQLRYAAGVKDMLDRYFKGE 204 (223)
Q Consensus 177 H~a~~t-----~~~~~~~~~~~~~~i~~~~~g~ 204 (223)
=++-.. ..-.+.|...+++.|.+...-+
T Consensus 327 gi~~Gal~~~a~~I~d~m~~aAa~alA~~~~~~ 359 (398)
T 2a9f_A 327 GIFRGALDARAKTITVEMQIAAAKGIASLVPDD 359 (398)
T ss_dssp HHHHHHHHHTCSSCCHHHHHHHHHHHHHTCSSC
T ss_pred hHHHHHHHcCCcCCCHHHHHHHHHHHHhcCCcc
Confidence 544211 1122445556667676666443
No 247
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.90 E-value=4.3e-05 Score=62.33 Aligned_cols=92 Identities=20% Similarity=0.187 Sum_probs=62.1
Q ss_pred ccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhH---HHhhCCeec--CCHHhhcccCCEEEEcCCCChh
Q 027408 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQL---EKETGAKFE--EDLDTMLPKCDIVVVNTPLTEK 105 (223)
Q Consensus 31 ~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~---~~~~g~~~~--~~l~e~l~~aDvVv~~~p~~~~ 105 (223)
..+|.|++|.|||.|.+|..-++.|...|.+|+++++... .+. ....++... .-.++.+.++|+|+.++. +++
T Consensus 26 fl~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~-~~l~~l~~~~~i~~i~~~~~~~dL~~adLVIaAT~-d~~ 103 (223)
T 3dfz_A 26 MLDLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVS-AEINEWEAKGQLRVKRKKVGEEDLLNVFFIVVATN-DQA 103 (223)
T ss_dssp EECCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCC-HHHHHHHHTTSCEEECSCCCGGGSSSCSEEEECCC-CTH
T ss_pred EEEcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCC-HHHHHHHHcCCcEEEECCCCHhHhCCCCEEEECCC-CHH
Confidence 4579999999999999999999999999999999998642 322 222233221 112345788999987765 333
Q ss_pred hhhcccHHHHhcCCCCcEEEEcCC
Q 027408 106 TRGMFDKDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 106 t~~~i~~~~~~~mk~ga~ivn~sr 129 (223)
+|.......+ -.++||+..
T Consensus 104 ----~N~~I~~~ak-~gi~VNvvD 122 (223)
T 3dfz_A 104 ----VNKFVKQHIK-NDQLVNMAS 122 (223)
T ss_dssp ----HHHHHHHHSC-TTCEEEC--
T ss_pred ----HHHHHHHHHh-CCCEEEEeC
Confidence 3344444455 557788853
No 248
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=97.89 E-value=2e-05 Score=68.32 Aligned_cols=66 Identities=18% Similarity=0.294 Sum_probs=50.5
Q ss_pred CEEEEEcccHHHHH-HHHHHccC-CCeEE-EEcCCCCChhHHHhh-CCeecCCHHhhcc--cCCEEEEcCCCCh
Q 027408 37 KTVGTVGCGRIGKL-LLQRLKPF-NCNLL-YHDRVKMDPQLEKET-GAKFEEDLDTMLP--KCDIVVVNTPLTE 104 (223)
Q Consensus 37 ~~igIiG~G~iG~~-iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~-g~~~~~~l~e~l~--~aDvVv~~~p~~~ 104 (223)
.+|||||+|.||+. .+..++.. +++|. ++|+++ ...++.+ +...++++++++. +.|+|++|+|...
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~--~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~ 77 (358)
T 3gdo_A 6 IKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRT--EEVKRDFPDAEVVHELEEITNDPAIELVIVTTPSGL 77 (358)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCH--HHHHHHCTTSEEESSTHHHHTCTTCCEEEECSCTTT
T ss_pred ceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCH--HHHHhhCCCCceECCHHHHhcCCCCCEEEEcCCcHH
Confidence 48999999999997 77777765 77764 778764 2234444 5667789999997 6899999999543
No 249
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=97.89 E-value=3.3e-05 Score=65.67 Aligned_cols=95 Identities=13% Similarity=0.172 Sum_probs=59.7
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCC--eEEEEcCCCCChh-HHH--hhCC------e--ecCCHHhhcccCCEEEEcCC
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQ-LEK--ETGA------K--FEEDLDTMLPKCDIVVVNTP 101 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~-~~~--~~g~------~--~~~~l~e~l~~aDvVv~~~p 101 (223)
..++|+|||.|.||..+|..|...|. +|.++|++....+ ... ..+. . ...+. +.++++|+|+++++
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~aD~Vii~v~ 84 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDP-EICRDADMVVITAG 84 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCG-GGGTTCSEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCH-HHhCCCCEEEECCC
Confidence 45799999999999999999998888 9999999742221 011 1111 1 11243 56789999999995
Q ss_pred CChhh-----------hh---cccHHHHhcCCCCcEEEEcCCCC
Q 027408 102 LTEKT-----------RG---MFDKDRIAKMKKGVLIVNNARGA 131 (223)
Q Consensus 102 ~~~~t-----------~~---~i~~~~~~~mk~ga~ivn~srg~ 131 (223)
..... .. -+-++..+ ..+++++++++.|-
T Consensus 85 ~~~~~g~~r~~~~~~n~~~~~~~~~~i~~-~~~~~~vi~~~Np~ 127 (319)
T 1lld_A 85 PRQKPGQSRLELVGATVNILKAIMPNLVK-VAPNAIYMLITNPV 127 (319)
T ss_dssp CCCCTTCCHHHHHHHHHHHHHHHHHHHHH-HCTTSEEEECCSSH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHH-hCCCceEEEecCch
Confidence 32110 00 11122222 36788898887654
No 250
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=97.89 E-value=3.7e-05 Score=68.70 Aligned_cols=85 Identities=20% Similarity=0.286 Sum_probs=57.6
Q ss_pred CCEEEEEcccHHHHHHHHHHccC-CCeE-EEEcCCCCChhH-HH---hhC---CeecC----CHHhhcc--cCCEEEEcC
Q 027408 36 GKTVGTVGCGRIGKLLLQRLKPF-NCNL-LYHDRVKMDPQL-EK---ETG---AKFEE----DLDTMLP--KCDIVVVNT 100 (223)
Q Consensus 36 g~~igIiG~G~iG~~iA~~l~~~-G~~V-~~~d~~~~~~~~-~~---~~g---~~~~~----~l~e~l~--~aDvVv~~~ 100 (223)
-.+|||||+|.||+..+..+... +++| .++|+++...+. ++ ++| ...++ +++++++ +.|+|++++
T Consensus 20 ~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~~~vD~V~i~t 99 (444)
T 2ixa_A 20 KVRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKDKNIDAVFVSS 99 (444)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTCTTCCEEEECC
T ss_pred CceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhcCCCCCEEEEcC
Confidence 35899999999999999988765 6775 588887532222 22 234 34566 8999997 589999999
Q ss_pred CCChhhhhcccHHHHhcCCCCcEEE
Q 027408 101 PLTEKTRGMFDKDRIAKMKKGVLIV 125 (223)
Q Consensus 101 p~~~~t~~~i~~~~~~~mk~ga~iv 125 (223)
|.... . +-..+.|+.|..++
T Consensus 100 p~~~h--~---~~~~~al~aGkhV~ 119 (444)
T 2ixa_A 100 PWEWH--H---EHGVAAMKAGKIVG 119 (444)
T ss_dssp CGGGH--H---HHHHHHHHTTCEEE
T ss_pred CcHHH--H---HHHHHHHHCCCeEE
Confidence 93322 1 33344455565444
No 251
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=97.87 E-value=4.1e-05 Score=64.94 Aligned_cols=81 Identities=21% Similarity=0.324 Sum_probs=65.3
Q ss_pred cccCCCCCEEEEEccc-HHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhh
Q 027408 30 RAYDLEGKTVGTVGCG-RIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRG 108 (223)
Q Consensus 30 ~~~~l~g~~igIiG~G-~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~ 108 (223)
.+.++.||++.|||-+ .+|+.+|..|...++.|+.+.... .++.+.+++||+|+.++. ..+
T Consensus 173 ~~i~l~Gk~vvViGRS~iVGkPla~LL~~~~ATVTi~Hs~T--------------~dl~~~~~~ADIvV~A~G----~p~ 234 (303)
T 4b4u_A 173 NNIEIAGKHAVVVGRSAILGKPMAMMLLQANATVTICHSRT--------------QNLPELVKQADIIVGAVG----KAE 234 (303)
T ss_dssp TTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------SSHHHHHHTCSEEEECSC----STT
T ss_pred HCCCCCCCEEEEEeccccccchHHHHHHhcCCEEEEecCCC--------------CCHHHHhhcCCeEEeccC----CCC
Confidence 3568999999999975 569999999999999999887532 378889999999999986 234
Q ss_pred cccHHHHhcCCCCcEEEEcCCCC
Q 027408 109 MFDKDRIAKMKKGVLIVNNARGA 131 (223)
Q Consensus 109 ~i~~~~~~~mk~ga~ivn~srg~ 131 (223)
++..+ .+|+|+++||++--.
T Consensus 235 ~i~~d---~vk~GavVIDVGin~ 254 (303)
T 4b4u_A 235 LIQKD---WIKQGAVVVDAGFHP 254 (303)
T ss_dssp CBCGG---GSCTTCEEEECCCBC
T ss_pred ccccc---cccCCCEEEEeceec
Confidence 55544 468999999998543
No 252
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=97.86 E-value=4e-05 Score=64.84 Aligned_cols=105 Identities=14% Similarity=0.133 Sum_probs=70.2
Q ss_pred CCEEEEEcc-cHHHHHHHHHHccCCCeEE-EEcCCCCChhHHHhhCCeecCCHHhhcc--cCCEEEEcCCCChhhhhccc
Q 027408 36 GKTVGTVGC-GRIGKLLLQRLKPFNCNLL-YHDRVKMDPQLEKETGAKFEEDLDTMLP--KCDIVVVNTPLTEKTRGMFD 111 (223)
Q Consensus 36 g~~igIiG~-G~iG~~iA~~l~~~G~~V~-~~d~~~~~~~~~~~~g~~~~~~l~e~l~--~aDvVv~~~p~~~~t~~~i~ 111 (223)
..+|+|+|+ |++|+.+++.+...|++++ .+||..... +..|+..+.+++++.. ..|++++++|. ....-+-
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V~p~~~g~---~~~G~~vy~sl~el~~~~~~D~viI~tP~--~~~~~~~ 81 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGT---THLGLPVFNTVREAVAATGATASVIYVPA--PFCKDSI 81 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTC---EETTEEEESSHHHHHHHHCCCEEEECCCG--GGHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCcccc---eeCCeeccCCHHHHhhcCCCCEEEEecCH--HHHHHHH
Confidence 468999999 9999999999988898843 667642111 2457777789999998 89999999993 3222222
Q ss_pred HHHHhcCCCCc-EEEEcCCCCc-cCHHHHHHHHHhCCcc
Q 027408 112 KDRIAKMKKGV-LIVNNARGAI-MDTQAVVDACSSGHIA 148 (223)
Q Consensus 112 ~~~~~~mk~ga-~ivn~srg~~-vd~~al~~~L~~g~i~ 148 (223)
.+..+ .|. .+|..+-|-- -+.+.|.++.++..+.
T Consensus 82 ~ea~~---~Gi~~iVi~t~G~~~~~~~~l~~~A~~~gv~ 117 (288)
T 2nu8_A 82 LEAID---AGIKLIITITEGIPTLDMLTVKVKLDEAGVR 117 (288)
T ss_dssp HHHHH---TTCSEEEECCCCCCHHHHHHHHHHHHHHTCE
T ss_pred HHHHH---CCCCEEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 33333 333 3455555532 2445788888776654
No 253
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=97.85 E-value=2.8e-05 Score=66.25 Aligned_cols=93 Identities=10% Similarity=0.066 Sum_probs=58.5
Q ss_pred CCEEEEEcccHHHHHHHHHHccCCC--eEEEEcCCCCChhHHH---hh---CCeecCCHHhhcccCCEEEEcCCCCh---
Q 027408 36 GKTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQLEK---ET---GAKFEEDLDTMLPKCDIVVVNTPLTE--- 104 (223)
Q Consensus 36 g~~igIiG~G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~---~~---g~~~~~~l~e~l~~aDvVv~~~p~~~--- 104 (223)
.++|+|||.|.||..+|..+...|. +|..+|.+......+. .. .+....++ +.+++||+|+++.....
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~t~d~-~~l~~aD~Vi~aag~~~pG~ 92 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEISKDL-SASAHSKVVIFTVNSLGSSQ 92 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTCTTEEEESCG-GGGTTCSEEEECCCC----C
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEEeCCH-HHHCCCCEEEEcCCCCCCCC
Confidence 4799999999999999999977777 8999998763111111 11 23333567 66899999999973210
Q ss_pred -------hhhh---cccHHHHhcCCCCcEEEEcCCC
Q 027408 105 -------KTRG---MFDKDRIAKMKKGVLIVNNARG 130 (223)
Q Consensus 105 -------~t~~---~i~~~~~~~mk~ga~ivn~srg 130 (223)
.+.. -+.++.-+. .|++++++++..
T Consensus 93 tR~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~sNP 127 (303)
T 2i6t_A 93 SYLDVVQSNVDMFRALVPALGHY-SQHSVLLVASQP 127 (303)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHH-TTTCEEEECSSS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEcCCh
Confidence 1111 112222233 488999988763
No 254
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=97.84 E-value=4.6e-05 Score=65.64 Aligned_cols=92 Identities=16% Similarity=0.165 Sum_probs=73.1
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeec-CCHHhhcccCCEEEEcCCCChhhhhcccHH
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-EDLDTMLPKCDIVVVNTPLTEKTRGMFDKD 113 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~ 113 (223)
.|.+|.|+|.|.+|...++.++.+|++|++.++++...+.++++|...+ .+.+++.+..|+|+-++.... .-..
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~D~vid~~g~~~-----~~~~ 250 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFYTDPKQCKEELDFIISTIPTHY-----DLKD 250 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEESSGGGCCSCEEEEEECCCSCC-----CHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeecCCHHHHhcCCCEEEECCCcHH-----HHHH
Confidence 5899999999999999999999999999999998877888888887432 344444457899998887321 2367
Q ss_pred HHhcCCCCcEEEEcCCCC
Q 027408 114 RIAKMKKGVLIVNNARGA 131 (223)
Q Consensus 114 ~~~~mk~ga~ivn~srg~ 131 (223)
.++.++++..++.++...
T Consensus 251 ~~~~l~~~G~iv~~G~~~ 268 (348)
T 3two_A 251 YLKLLTYNGDLALVGLPP 268 (348)
T ss_dssp HHTTEEEEEEEEECCCCC
T ss_pred HHHHHhcCCEEEEECCCC
Confidence 788899999999886533
No 255
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.84 E-value=0.00012 Score=62.43 Aligned_cols=96 Identities=17% Similarity=0.196 Sum_probs=70.9
Q ss_pred CCCCCEEEEEc-ccHHHHHHHHHHccCCCeEEEEcCCCC-C-hhH-HHhh--CCeecCCHHhhcccCCEEEEcC----CC
Q 027408 33 DLEGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKM-D-PQL-EKET--GAKFEEDLDTMLPKCDIVVVNT----PL 102 (223)
Q Consensus 33 ~l~g~~igIiG-~G~iG~~iA~~l~~~G~~V~~~d~~~~-~-~~~-~~~~--g~~~~~~l~e~l~~aDvVv~~~----p~ 102 (223)
.+.|.+|++|| .+++.++++..+..+|++|.+..|... . .+. ++.. ++....+++++++++|+|..-. ..
T Consensus 151 ~l~glkva~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvyt~~w~smg~ 230 (309)
T 4f2g_A 151 PIRGKTVAWVGDANNMLYTWIQAARILDFKLQLSTPPGYALDAKLVDAESAPFYQVFDDPNEACKGADLVTTDVWTSMGF 230 (309)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCGGGCCCGGGSCGGGGGGEEECSSHHHHTTTCSEEEECCC-----
T ss_pred CCCCCEEEEECCCcchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHcCCeEEEEcCHHHHhcCCCEEEecccccCcc
Confidence 58999999999 579999999999999999999988541 2 222 1122 3455689999999999998754 10
Q ss_pred ---Ch-----hhhhcccHHHHhcCCCCcEEEEcC
Q 027408 103 ---TE-----KTRGMFDKDRIAKMKKGVLIVNNA 128 (223)
Q Consensus 103 ---~~-----~t~~~i~~~~~~~mk~ga~ivn~s 128 (223)
.+ -...-++.+.++.+|++++|..+.
T Consensus 231 e~~~~~r~~~~~~y~v~~~~l~~a~~~ai~mH~l 264 (309)
T 4f2g_A 231 EAENEARKRAFADWCVDEEMMSHANSDALFMHCL 264 (309)
T ss_dssp -------CCSGGGGCBCHHHHTTSCTTCEEEECS
T ss_pred hhhHHHHHHHhcCceeCHHHHHhcCCCeEEECCC
Confidence 00 113457889999999999988774
No 256
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=97.84 E-value=2.4e-05 Score=63.60 Aligned_cols=87 Identities=17% Similarity=0.248 Sum_probs=57.8
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCee----cCC---HHhh-cccCCEEEEcCCCChhh
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKF----EED---LDTM-LPKCDIVVVNTPLTEKT 106 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~----~~~---l~e~-l~~aDvVv~~~p~~~~t 106 (223)
..++|.|+|+|.+|+.+|+.|...|. |+++++++...+... .++.. ..+ ++++ +.++|.|++++|..+.+
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n 85 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSET 85 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHHHH
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcHHH
Confidence 34689999999999999999999999 999998763333333 44432 122 2333 67899999999854433
Q ss_pred hhcccHHHHhcCCCCcEEE
Q 027408 107 RGMFDKDRIAKMKKGVLIV 125 (223)
Q Consensus 107 ~~~i~~~~~~~mk~ga~iv 125 (223)
+.-....+.+.++..+|
T Consensus 86 --~~~~~~a~~~~~~~~ii 102 (234)
T 2aef_A 86 --IHCILGIRKIDESVRII 102 (234)
T ss_dssp --HHHHHHHHHHCSSSEEE
T ss_pred --HHHHHHHHHHCCCCeEE
Confidence 33345556666764443
No 257
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=97.84 E-value=1.3e-05 Score=69.57 Aligned_cols=66 Identities=21% Similarity=0.190 Sum_probs=49.2
Q ss_pred CEEEEEcccHHHHHHHHHHccC--------CCe-EEEEcCCCC-ChhHHHhhCC-eecCCHHhhcc--cCCEEEEcCCC
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPF--------NCN-LLYHDRVKM-DPQLEKETGA-KFEEDLDTMLP--KCDIVVVNTPL 102 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~--------G~~-V~~~d~~~~-~~~~~~~~g~-~~~~~l~e~l~--~aDvVv~~~p~ 102 (223)
-+|||||+|.||+..++.++.. +.+ +.++|+++. ..+.++++++ ..+++++++++ +.|+|++++|.
T Consensus 7 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~~~~~d~~~ll~~~~iDaV~I~tP~ 85 (390)
T 4h3v_A 7 LGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWSTTETDWRTLLERDDVQLVDVCTPG 85 (390)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCSEEESCHHHHTTCTTCSEEEECSCG
T ss_pred CcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCCh
Confidence 4899999999999988877543 235 447788752 3345566776 45689999995 48999999993
No 258
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=97.84 E-value=3.2e-05 Score=69.95 Aligned_cols=66 Identities=17% Similarity=0.190 Sum_probs=51.8
Q ss_pred CCEEEEEcc----cHHHHHHHHHHccC--CCeE-EEEcCCCCC-hhHHHhhCCe---ecCCHHhhcc--cCCEEEEcCC
Q 027408 36 GKTVGTVGC----GRIGKLLLQRLKPF--NCNL-LYHDRVKMD-PQLEKETGAK---FEEDLDTMLP--KCDIVVVNTP 101 (223)
Q Consensus 36 g~~igIiG~----G~iG~~iA~~l~~~--G~~V-~~~d~~~~~-~~~~~~~g~~---~~~~l~e~l~--~aDvVv~~~p 101 (223)
-.+|||||+ |.||+..++.++.. +++| .++|+++.. ...++.+++. .+.+++++++ +.|+|++|+|
T Consensus 39 ~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~~~~~d~~ell~~~~vD~V~I~tp 117 (479)
T 2nvw_A 39 PIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFDSLESFAQYKDIDMIVVSVK 117 (479)
T ss_dssp CEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEESCHHHHHHCTTCSEEEECSC
T ss_pred cCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEcCC
Confidence 358999999 99999999999875 6775 478886532 2344556764 6789999995 6999999999
No 259
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=97.83 E-value=0.00025 Score=60.50 Aligned_cols=96 Identities=14% Similarity=0.149 Sum_probs=72.6
Q ss_pred CCCCCEEEEEccc--HHHHHHHHHHccCCCeEEEEcCCCC-Ch-hH---H----HhhC--CeecCCHHhhcccCCEEEEc
Q 027408 33 DLEGKTVGTVGCG--RIGKLLLQRLKPFNCNLLYHDRVKM-DP-QL---E----KETG--AKFEEDLDTMLPKCDIVVVN 99 (223)
Q Consensus 33 ~l~g~~igIiG~G--~iG~~iA~~l~~~G~~V~~~d~~~~-~~-~~---~----~~~g--~~~~~~l~e~l~~aDvVv~~ 99 (223)
.+.|.+|++||=| ++.++++..+..+|++|.+..|... .. +. + ++.| +....+++++++++|+|...
T Consensus 145 ~l~gl~va~vGD~~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~~ 224 (307)
T 2i6u_A 145 ALRGLRLSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTADAHAAAAGADVLVTD 224 (307)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEEC
T ss_pred CcCCeEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHHHhcCCCEEEec
Confidence 5899999999985 9999999999999999999998652 22 12 1 1445 45578999999999999884
Q ss_pred CCC-------Chh-----hhhcccHHHHhcCCCCcEEEEcC
Q 027408 100 TPL-------TEK-----TRGMFDKDRIAKMKKGVLIVNNA 128 (223)
Q Consensus 100 ~p~-------~~~-----t~~~i~~~~~~~mk~ga~ivn~s 128 (223)
.=. .++ ...-++.+.++.+|++++|..+.
T Consensus 225 ~w~smg~~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~l 265 (307)
T 2i6u_A 225 TWTSMGQENDGLDRVKPFRPFQLNSRLLALADSDAIVLHCL 265 (307)
T ss_dssp CSSCTTCTTSCCCSSGGGGGGCBCHHHHHHSCTTCEEEECS
T ss_pred ceecCCcccchHHHHHHHhhcCCCHHHHhhcCCCcEEECCC
Confidence 320 011 13457888888899999888774
No 260
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=97.83 E-value=0.00019 Score=61.95 Aligned_cols=96 Identities=14% Similarity=0.190 Sum_probs=71.8
Q ss_pred CCCCCEEEEEcc-cHHHHHHHHHHccCCCeEEEEcCCCC-Ch-hH-------HHhhC--CeecCCHHhhcccCCEEEEcC
Q 027408 33 DLEGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKM-DP-QL-------EKETG--AKFEEDLDTMLPKCDIVVVNT 100 (223)
Q Consensus 33 ~l~g~~igIiG~-G~iG~~iA~~l~~~G~~V~~~d~~~~-~~-~~-------~~~~g--~~~~~~l~e~l~~aDvVv~~~ 100 (223)
.+.|.+|++||= +++.++++..+..+|++|.+..|... .. +. ++..| +....+++++++++|+|....
T Consensus 176 ~l~glkva~vGD~~nva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDVvyt~~ 255 (340)
T 4ep1_A 176 TFKGIKLAYVGDGNNVCHSLLLASAKVGMHMTVATPVGYRPNEEIVKKALAIAKETGAEIEILHNPELAVNEADFIYTDV 255 (340)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEEEESCHHHHHTTCSEEEECC
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEECCHHHHhCCCCEEEecC
Confidence 489999999994 78999999999999999999998642 22 21 12445 445679999999999998755
Q ss_pred CCCh------h-----hhhcccHHHHhcCCCCcEEEEcC
Q 027408 101 PLTE------K-----TRGMFDKDRIAKMKKGVLIVNNA 128 (223)
Q Consensus 101 p~~~------~-----t~~~i~~~~~~~mk~ga~ivn~s 128 (223)
=-.. + ...-++.+.++.+|++++|..+.
T Consensus 256 w~smg~e~~~~~~~~~~~y~vt~ell~~ak~dai~MHcL 294 (340)
T 4ep1_A 256 WMSMGQEGEEEKYTLFQPYQINKELVKHAKQTYHFLHCL 294 (340)
T ss_dssp C------CHHHHHHHHGGGCBCHHHHTTSCTTCEEEECS
T ss_pred ccCCCCCchHHHHHHhccccCCHHHHHhcCCCcEEECCC
Confidence 2110 0 12457889999999999998775
No 261
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=97.82 E-value=1.8e-05 Score=70.12 Aligned_cols=85 Identities=19% Similarity=0.248 Sum_probs=58.7
Q ss_pred CCEEEEEcccH---HHHHHHHHHccCC-CeEE--EEcCCCC-ChhHHHhhCC---eecCCHHhhccc-------CCEEEE
Q 027408 36 GKTVGTVGCGR---IGKLLLQRLKPFN-CNLL--YHDRVKM-DPQLEKETGA---KFEEDLDTMLPK-------CDIVVV 98 (223)
Q Consensus 36 g~~igIiG~G~---iG~~iA~~l~~~G-~~V~--~~d~~~~-~~~~~~~~g~---~~~~~l~e~l~~-------aDvVv~ 98 (223)
-.+|||||+|. ||+..+..++..+ +++. ++|+++. ..+.++++|+ ..++++++++++ .|+|++
T Consensus 37 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~I 116 (417)
T 3v5n_A 37 RIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGRELGLDPSRVYSDFKEMAIREAKLKNGIEAVAI 116 (417)
T ss_dssp CEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHHHTCCGGGBCSCHHHHHHHHHHCTTCCSEEEE
T ss_pred cceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHcCCCcccccCCHHHHHhcccccCCCCcEEEE
Confidence 35899999999 9999988887665 6765 5688652 2344566787 467899999976 899999
Q ss_pred cCCCChhhhhcccHHHHhcCCCCcEEE
Q 027408 99 NTPLTEKTRGMFDKDRIAKMKKGVLIV 125 (223)
Q Consensus 99 ~~p~~~~t~~~i~~~~~~~mk~ga~iv 125 (223)
++|..... +-....++.|..|+
T Consensus 117 ~tp~~~H~-----~~~~~al~aGkhVl 138 (417)
T 3v5n_A 117 VTPNHVHY-----AAAKEFLKRGIHVI 138 (417)
T ss_dssp CSCTTSHH-----HHHHHHHTTTCEEE
T ss_pred CCCcHHHH-----HHHHHHHhCCCeEE
Confidence 99944322 33334455555444
No 262
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=97.81 E-value=0.00034 Score=59.87 Aligned_cols=96 Identities=14% Similarity=0.186 Sum_probs=73.4
Q ss_pred CCCCCEEEEEcc-cHHHHHHHHHHccCCCeEEEEcCCCC-Ch-hH---HH----hhC--CeecCCHHhhcccCCEEEEcC
Q 027408 33 DLEGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKM-DP-QL---EK----ETG--AKFEEDLDTMLPKCDIVVVNT 100 (223)
Q Consensus 33 ~l~g~~igIiG~-G~iG~~iA~~l~~~G~~V~~~d~~~~-~~-~~---~~----~~g--~~~~~~l~e~l~~aDvVv~~~ 100 (223)
.+.|.+|++||= +++.++++..+..+|++|.+..|... .. +. ++ +.| +....+++++++++|+|....
T Consensus 152 ~l~gl~va~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvy~~~ 231 (315)
T 1pvv_A 152 TIKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYTDV 231 (315)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECC
T ss_pred CcCCcEEEEECCCcchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEEcc
Confidence 589999999996 99999999999999999999998652 22 22 11 445 445689999999999998844
Q ss_pred CC-------Chh-----hhhcccHHHHhcCCCCcEEEEcC
Q 027408 101 PL-------TEK-----TRGMFDKDRIAKMKKGVLIVNNA 128 (223)
Q Consensus 101 p~-------~~~-----t~~~i~~~~~~~mk~ga~ivn~s 128 (223)
=. .++ ...-++.+.++.+|++++|..+.
T Consensus 232 w~smg~~~~~~~~~~~~~~y~v~~ell~~a~~~ai~mH~l 271 (315)
T 1pvv_A 232 WASMGQEAEAEERRKIFRPFQVNKDLVKHAKPDYMFMHCL 271 (315)
T ss_dssp CCCSSTTSSSSHHHHHHGGGCBCHHHHHTSCTTCEEEECS
T ss_pred eeccCcccchHHHHHHHHhcCCCHHHHhhcCCCcEEECCC
Confidence 21 111 13457899999999999998774
No 263
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=97.81 E-value=1.1e-05 Score=70.96 Aligned_cols=68 Identities=21% Similarity=0.186 Sum_probs=52.6
Q ss_pred CCEEEEEcccH---HHHHHHHHHccCC-CeEE--EEcCCCC-ChhHHHhhCC---eecCCHHhhccc-------CCEEEE
Q 027408 36 GKTVGTVGCGR---IGKLLLQRLKPFN-CNLL--YHDRVKM-DPQLEKETGA---KFEEDLDTMLPK-------CDIVVV 98 (223)
Q Consensus 36 g~~igIiG~G~---iG~~iA~~l~~~G-~~V~--~~d~~~~-~~~~~~~~g~---~~~~~l~e~l~~-------aDvVv~ 98 (223)
-.+|||||+|. ||+..+..++..+ +++. ++|+++. ..+.++++|+ ..++++++++.+ .|+|++
T Consensus 12 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~i 91 (398)
T 3dty_A 12 PIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGEQLGVDSERCYADYLSMFEQEARRADGIQAVSI 91 (398)
T ss_dssp CEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHHHTTCCGGGBCSSHHHHHHHHTTCTTCCSEEEE
T ss_pred cceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhCCCcceeeCCHHHHHhcccccCCCCCEEEE
Confidence 45899999999 9999998887654 6765 4688652 3344566787 567899999965 899999
Q ss_pred cCCCC
Q 027408 99 NTPLT 103 (223)
Q Consensus 99 ~~p~~ 103 (223)
++|..
T Consensus 92 ~tp~~ 96 (398)
T 3dty_A 92 ATPNG 96 (398)
T ss_dssp ESCGG
T ss_pred CCCcH
Confidence 99943
No 264
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=97.80 E-value=0.00015 Score=61.68 Aligned_cols=96 Identities=20% Similarity=0.197 Sum_probs=72.9
Q ss_pred CCCCCEEEEEcc---cHHHHHHHHHHccC-CCeEEEEcCCCC--ChhHHHhhCC--eecCCHHhhcccCCEEEEcCCCCh
Q 027408 33 DLEGKTVGTVGC---GRIGKLLLQRLKPF-NCNLLYHDRVKM--DPQLEKETGA--KFEEDLDTMLPKCDIVVVNTPLTE 104 (223)
Q Consensus 33 ~l~g~~igIiG~---G~iG~~iA~~l~~~-G~~V~~~d~~~~--~~~~~~~~g~--~~~~~l~e~l~~aDvVv~~~p~~~ 104 (223)
.+.|.+|+++|= |++.++++..+..+ |++|.+..|... ..+..++.|. ....+++++++++|+|....=-.+
T Consensus 146 ~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q~e 225 (299)
T 1pg5_A 146 TIDGLVFALLGDLKYARTVNSLLRILTRFRPKLVYLISPQLLRARKEILDELNYPVKEVENPFEVINEVDVLYVTRIQKE 225 (299)
T ss_dssp CSTTCEEEEEECCSSCHHHHHHHHHGGGSCCSEEEEECCGGGCCCHHHHTTCCSCEEEESCGGGTGGGCSEEEEECCCST
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCchhcCCHHHHHHcCCeEEEeCCHHHHhcCCCEEEeCCcccc
Confidence 589999999996 69999999999999 999999998642 2222334454 345789999999999988654321
Q ss_pred ------hh-----hhcccHHHHhcCCCCcEEEEcC
Q 027408 105 ------KT-----RGMFDKDRIAKMKKGVLIVNNA 128 (223)
Q Consensus 105 ------~t-----~~~i~~~~~~~mk~ga~ivn~s 128 (223)
+. ..-++.+.++.+|++++|..+.
T Consensus 226 r~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~l 260 (299)
T 1pg5_A 226 RFVDEMEYEKIKGSYIVSLDLANKMKKDSIILHPL 260 (299)
T ss_dssp TSSCHHHHHHHGGGGSBCHHHHHTSCTTCEEECCS
T ss_pred cccCHHHHHHhhcCcccCHHHHHhcCCCCEEECCC
Confidence 11 2457888888889998887764
No 265
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=97.78 E-value=8.1e-05 Score=63.92 Aligned_cols=61 Identities=23% Similarity=0.280 Sum_probs=48.8
Q ss_pred CCCEEEEEcccHHHH-HHHHHHccC-CCeE-EEEcCCCCChhHHHhhCCeecCCHHhhccc---CCEEEEcCC
Q 027408 35 EGKTVGTVGCGRIGK-LLLQRLKPF-NCNL-LYHDRVKMDPQLEKETGAKFEEDLDTMLPK---CDIVVVNTP 101 (223)
Q Consensus 35 ~g~~igIiG~G~iG~-~iA~~l~~~-G~~V-~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~---aDvVv~~~p 101 (223)
.-.+|||||+|.||+ ..+..++.. +++| .++|++.. ..++..+.++++++++ .|+|++++|
T Consensus 24 ~~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~------~~g~~~~~~~~~ll~~~~~vD~V~i~tp 90 (330)
T 4ew6_A 24 SPINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGT------VEGVNSYTTIEAMLDAEPSIDAVSLCMP 90 (330)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCC------CTTSEEESSHHHHHHHCTTCCEEEECSC
T ss_pred CCceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChh------hcCCCccCCHHHHHhCCCCCCEEEEeCC
Confidence 346899999999998 788888765 6775 47787653 2467777899999865 899999999
No 266
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.78 E-value=1.5e-05 Score=71.87 Aligned_cols=93 Identities=23% Similarity=0.275 Sum_probs=58.8
Q ss_pred ccCCCCCEEEEEcccHHHHHHHHHHccC-CCeEEEEcCCCCCh-hHHHhhCCee----c---CCHHhhcccCCEEEEcCC
Q 027408 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPF-NCNLLYHDRVKMDP-QLEKETGAKF----E---EDLDTMLPKCDIVVVNTP 101 (223)
Q Consensus 31 ~~~l~g~~igIiG~G~iG~~iA~~l~~~-G~~V~~~d~~~~~~-~~~~~~g~~~----~---~~l~e~l~~aDvVv~~~p 101 (223)
...+.+++|+|+|.|.+|+.+++.|... |.+|.+++|+.... +.+...++.. . .++.++++++|+|+.++|
T Consensus 18 ~~~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp 97 (467)
T 2axq_A 18 EGRHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIP 97 (467)
T ss_dssp -----CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSC
T ss_pred ccCCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCc
Confidence 4568899999999999999999999877 78999999975322 2222223321 1 245567789999999999
Q ss_pred CChhhhhcccHHHHhcCCCCcEEEEcC
Q 027408 102 LTEKTRGMFDKDRIAKMKKGVLIVNNA 128 (223)
Q Consensus 102 ~~~~t~~~i~~~~~~~mk~ga~ivn~s 128 (223)
.... .-+.. ..++.+..+++++
T Consensus 98 ~~~~--~~v~~---a~l~~g~~vvd~~ 119 (467)
T 2axq_A 98 YTFH--PNVVK---SAIRTKTDVVTSS 119 (467)
T ss_dssp GGGH--HHHHH---HHHHHTCEEEECS
T ss_pred hhhh--HHHHH---HHHhcCCEEEEee
Confidence 4321 11112 2234566777764
No 267
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=97.78 E-value=1.5e-05 Score=71.52 Aligned_cols=67 Identities=16% Similarity=0.138 Sum_probs=48.5
Q ss_pred CCCEEEEEcccHH--HHHHHHHHcc----CCCeEEEEcCCCCChhHHHh---------hCCeecCCHHhhcccCCEEEEc
Q 027408 35 EGKTVGTVGCGRI--GKLLLQRLKP----FNCNLLYHDRVKMDPQLEKE---------TGAKFEEDLDTMLPKCDIVVVN 99 (223)
Q Consensus 35 ~g~~igIiG~G~i--G~~iA~~l~~----~G~~V~~~d~~~~~~~~~~~---------~g~~~~~~l~e~l~~aDvVv~~ 99 (223)
..+||+|||.|.+ |..++..+.. .| +|..||+.+...+.... ..+...+++++++++||+|+++
T Consensus 4 ~~~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~le~~~~~~~~l~~~~~~I~~TtD~~eAl~dADfVI~a 82 (450)
T 3fef_A 4 DQIKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAAQKNEVIGNHSGNGRWRYEAVSTLKKALSAADIVIIS 82 (450)
T ss_dssp CCEEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHHHHHHHHHTTSTTSCEEEEEESSHHHHHTTCSEEEEC
T ss_pred CCCEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHHHHHHHHHHHHhccCCeEEEECCHHHHhcCCCEEEec
Confidence 4579999999996 6788877753 36 99999997522221111 1244557899999999999999
Q ss_pred CCC
Q 027408 100 TPL 102 (223)
Q Consensus 100 ~p~ 102 (223)
++.
T Consensus 83 irv 85 (450)
T 3fef_A 83 ILP 85 (450)
T ss_dssp CCS
T ss_pred ccc
Confidence 963
No 268
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=97.76 E-value=6.1e-06 Score=68.40 Aligned_cols=107 Identities=21% Similarity=0.208 Sum_probs=69.6
Q ss_pred HHHHHHcCCCccCcccCcccCCCCCEEEEEcccHHHHHHHHHHccCCC-eEEEEcCCCC-------------------Ch
Q 027408 13 GHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKM-------------------DP 72 (223)
Q Consensus 13 ~~~~~~~~~w~~~~~~~~~~~l~g~~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~~~-------------------~~ 72 (223)
+.++++-..|.... ...|.+++|.|||+|.+|..+|+.|...|. +|.++|+... +.
T Consensus 12 y~Rq~~l~~~g~~~----q~~l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka 87 (249)
T 1jw9_B 12 YNRQIILRGFDFDG----QEALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKV 87 (249)
T ss_dssp THHHHTSTTTHHHH----HHHHHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHH
T ss_pred hhheecccccCHHH----HHHHhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHH
Confidence 34555545575322 236899999999999999999999999997 7999998751 11
Q ss_pred hHH-Hhh-----CC--ee----c--CCHHhhcccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEc
Q 027408 73 QLE-KET-----GA--KF----E--EDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNN 127 (223)
Q Consensus 73 ~~~-~~~-----g~--~~----~--~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~ 127 (223)
+.+ +.+ ++ .. . .+++++++++|+|+.+++ +.+++..+++...+. +..+|+.
T Consensus 88 ~~~~~~l~~~np~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d-~~~~~~~l~~~~~~~---~~p~i~~ 152 (249)
T 1jw9_B 88 ESARDALTRINPHIAITPVNALLDDAELAALIAEHDLVLDCTD-NVAVRNQLNAGCFAA---KVPLVSG 152 (249)
T ss_dssp HHHHHHHHHHCTTSEEEEECSCCCHHHHHHHHHTSSEEEECCS-SHHHHHHHHHHHHHH---TCCEEEE
T ss_pred HHHHHHHHHHCCCcEEEEEeccCCHhHHHHHHhCCCEEEEeCC-CHHHHHHHHHHHHHc---CCCEEEe
Confidence 111 111 11 11 1 134567889999998886 566777776655543 3345554
No 269
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=97.74 E-value=4.3e-05 Score=66.39 Aligned_cols=91 Identities=15% Similarity=0.157 Sum_probs=67.8
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHH-hhCCeec---CC---HHhhcccCCEEEEcCCCChhhh
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEK-ETGAKFE---ED---LDTMLPKCDIVVVNTPLTEKTR 107 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~-~~g~~~~---~~---l~e~l~~aDvVv~~~p~~~~t~ 107 (223)
.|++|.|+|.|.||...++.++.+|++|+++++++...+.+. ++|...+ .+ +.++....|+|+.++.....
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~D~vid~~g~~~~-- 264 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSAVHP-- 264 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTCEEEEEECCSSCCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCCCCEEEECCCcHHH--
Confidence 789999999999999999999999999999998765444444 6665321 22 23334568999998873321
Q ss_pred hcccHHHHhcCCCCcEEEEcCCC
Q 027408 108 GMFDKDRIAKMKKGVLIVNNARG 130 (223)
Q Consensus 108 ~~i~~~~~~~mk~ga~ivn~srg 130 (223)
....++.|+++..+++++..
T Consensus 265 ---~~~~~~~l~~~G~iv~~g~~ 284 (366)
T 1yqd_A 265 ---LLPLFGLLKSHGKLILVGAP 284 (366)
T ss_dssp ---SHHHHHHEEEEEEEEECCCC
T ss_pred ---HHHHHHHHhcCCEEEEEccC
Confidence 25677888998899988753
No 270
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=97.74 E-value=0.00033 Score=60.19 Aligned_cols=96 Identities=16% Similarity=0.198 Sum_probs=72.3
Q ss_pred CCCCCEEEEEccc--HHHHHHHHHHccCCCeEEEEcCCC-C-ChhH---H----HhhC--CeecCCHHhhcccCCEEEEc
Q 027408 33 DLEGKTVGTVGCG--RIGKLLLQRLKPFNCNLLYHDRVK-M-DPQL---E----KETG--AKFEEDLDTMLPKCDIVVVN 99 (223)
Q Consensus 33 ~l~g~~igIiG~G--~iG~~iA~~l~~~G~~V~~~d~~~-~-~~~~---~----~~~g--~~~~~~l~e~l~~aDvVv~~ 99 (223)
.+.|.+|+++|=| ++.++++..+..+|++|.+..|.. . ..+. + ++.| +....+++++++++|+|...
T Consensus 164 ~l~gl~va~vGD~~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvyt~ 243 (325)
T 1vlv_A 164 RLKGVKVVFMGDTRNNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTSNLEEALAGADVVYTD 243 (325)
T ss_dssp CSTTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEESCHHHHHTTCSEEEEC
T ss_pred CcCCcEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEcCHHHHHccCCEEEec
Confidence 5899999999985 999999999999999999999864 2 2222 1 1455 44578999999999999884
Q ss_pred CCC-------Chh-----hhhcccHHHHhcC-CCCcEEEEcC
Q 027408 100 TPL-------TEK-----TRGMFDKDRIAKM-KKGVLIVNNA 128 (223)
Q Consensus 100 ~p~-------~~~-----t~~~i~~~~~~~m-k~ga~ivn~s 128 (223)
.=. .++ ...-++.+.++.+ |++++|..+.
T Consensus 244 ~w~smg~~~~~~~~~~~~~~y~v~~ell~~a~k~dai~mH~L 285 (325)
T 1vlv_A 244 VWASMGEEDKEKERMALLKPYQVNERVMEMTGKSETIFMHCL 285 (325)
T ss_dssp CCC----------CHHHHGGGCBCHHHHHTTCCTTCEEEECS
T ss_pred cccccccccchHhHHHHHhhcCCCHHHHHhccCCCeEEECCC
Confidence 321 011 1345788999999 8899988774
No 271
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=97.74 E-value=3.1e-05 Score=67.28 Aligned_cols=66 Identities=12% Similarity=0.093 Sum_probs=50.2
Q ss_pred CCEEEEEcccHHHH-HHHHHHccCCCeE-EEEcCCCCC-hhHHHhhC-CeecCCHHhhccc--CCEEEEcCC
Q 027408 36 GKTVGTVGCGRIGK-LLLQRLKPFNCNL-LYHDRVKMD-PQLEKETG-AKFEEDLDTMLPK--CDIVVVNTP 101 (223)
Q Consensus 36 g~~igIiG~G~iG~-~iA~~l~~~G~~V-~~~d~~~~~-~~~~~~~g-~~~~~~l~e~l~~--aDvVv~~~p 101 (223)
-.+|||||+|.+|. .++..++.-++++ .++|+++.. .+.+++++ ...++++++++++ .|+|++++|
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~I~tp 97 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSAVYADARRIATAEEILEDENIGLIVSAAV 97 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHSSSCCEESCHHHHHTCTTCCEEEECCC
T ss_pred CcEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCC
Confidence 46899999999995 5677777678885 478887532 33455666 4567899999975 899999999
No 272
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=97.73 E-value=2.1e-05 Score=70.23 Aligned_cols=65 Identities=14% Similarity=0.094 Sum_probs=51.4
Q ss_pred CEEEEEcc----cHHHHHHHHHHccC--CCeE-EEEcCCCCC-hhHHHhhCCe---ecCCHHhhcc--cCCEEEEcCC
Q 027408 37 KTVGTVGC----GRIGKLLLQRLKPF--NCNL-LYHDRVKMD-PQLEKETGAK---FEEDLDTMLP--KCDIVVVNTP 101 (223)
Q Consensus 37 ~~igIiG~----G~iG~~iA~~l~~~--G~~V-~~~d~~~~~-~~~~~~~g~~---~~~~l~e~l~--~aDvVv~~~p 101 (223)
.+|||||+ |.||+..++.++.. ++++ .++|+++.. .+.++.+++. .+.++++++. +.|+|++|+|
T Consensus 21 irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~ll~~~~vD~V~i~tp 98 (438)
T 3btv_A 21 IRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFPTLESFASSSTIDMIVIAIQ 98 (438)
T ss_dssp EEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTCTTCEEESSHHHHHHCSSCSEEEECSC
T ss_pred CEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEeCC
Confidence 58999999 99999999999876 6775 588886532 2344556664 6789999996 6899999999
No 273
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=97.72 E-value=4.5e-05 Score=65.28 Aligned_cols=67 Identities=15% Similarity=0.106 Sum_probs=46.1
Q ss_pred CCEEEEEcccHHHHHHHHHHccCCC--eEEEEcCCCCChhH-HHhh---------CCeecCCHHhhcccCCEEEEcCCC
Q 027408 36 GKTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQL-EKET---------GAKFEEDLDTMLPKCDIVVVNTPL 102 (223)
Q Consensus 36 g~~igIiG~G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~~-~~~~---------g~~~~~~l~e~l~~aDvVv~~~p~ 102 (223)
-++|+|||.|.||.++|..++..|. +|..+|+++...+. ...+ ......+..+.+++||+|+++.|.
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~~aDvViia~~~ 84 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICAGA 84 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEECCSC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHHHhCCCCEEEEcCCC
Confidence 4699999999999999999976664 79999987521111 1110 111112345678999999999764
No 274
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=97.72 E-value=3e-05 Score=62.97 Aligned_cols=66 Identities=17% Similarity=0.197 Sum_probs=44.0
Q ss_pred CCEEEEEcccHHHHHHHHH--HccCCCeE-EEEcCCCCChh-HHHhhCCeecCCHHhhcccCCEEEEcCC
Q 027408 36 GKTVGTVGCGRIGKLLLQR--LKPFNCNL-LYHDRVKMDPQ-LEKETGAKFEEDLDTMLPKCDIVVVNTP 101 (223)
Q Consensus 36 g~~igIiG~G~iG~~iA~~--l~~~G~~V-~~~d~~~~~~~-~~~~~g~~~~~~l~e~l~~aDvVv~~~p 101 (223)
..+|+|||+|.+|+.+++. ....|+++ .++|.++.... ......+...+++++++++.|+|++|+|
T Consensus 85 ~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~eli~~~D~ViIAvP 154 (215)
T 2vt3_A 85 MTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGTEVGGVPVYNLDDLEQHVKDESVAILTVP 154 (215)
T ss_dssp --CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTTCEETTEEEEEGGGHHHHCSSCCEEEECSC
T ss_pred CCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHhHhcCCeeechhhHHHHHHhCCEEEEecC
Confidence 4679999999999999995 34567875 47887663322 1222233446789999977799999999
No 275
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=97.72 E-value=0.00037 Score=59.76 Aligned_cols=96 Identities=10% Similarity=0.091 Sum_probs=71.1
Q ss_pred CCCCCEEEEEc-ccHHHHHHHHHHccCCCeEEEEcCCCC-Ch-hH-------HHhhC--CeecCCHHhhcccCCEEEEcC
Q 027408 33 DLEGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKM-DP-QL-------EKETG--AKFEEDLDTMLPKCDIVVVNT 100 (223)
Q Consensus 33 ~l~g~~igIiG-~G~iG~~iA~~l~~~G~~V~~~d~~~~-~~-~~-------~~~~g--~~~~~~l~e~l~~aDvVv~~~ 100 (223)
.+.|.+|++|| .+++.++++..+..+|++|.+..|... .. +. ++..| +....+++++++++|+|+...
T Consensus 154 ~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~eav~~aDvvyt~~ 233 (323)
T 3gd5_A 154 RLAGLKLAYVGDGNNVAHSLLLGCAKVGMSIAVATPEGFTPDPAVSARASEIAGRTGAEVQILRDPFEAARGAHILYTDV 233 (323)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECC
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEECCCcccCCHHHHHHHHHHHHHcCCeEEEECCHHHHhcCCCEEEEec
Confidence 58999999999 589999999999999999999998642 22 21 12234 455689999999999998754
Q ss_pred CCCh----------h--hhhcccHHHHhcCCCCcEEEEcC
Q 027408 101 PLTE----------K--TRGMFDKDRIAKMKKGVLIVNNA 128 (223)
Q Consensus 101 p~~~----------~--t~~~i~~~~~~~mk~ga~ivn~s 128 (223)
=-.. + ...-++.+.++.+|++++|..+.
T Consensus 234 wqs~g~~~~~~~~~~~~~~y~vt~ell~~ak~dai~mHcl 273 (323)
T 3gd5_A 234 WTSMGQEAETQHRLQLFEQYQINAALLNCAAAEAIVLHCL 273 (323)
T ss_dssp CC---------CCHHHHTTCCBCHHHHHTSCTTCEEEECS
T ss_pred eecCCCcccchHHHHHhhccCCCHHHHhhcCCCcEEECCC
Confidence 2110 0 12357888889899999888764
No 276
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=97.71 E-value=8.3e-05 Score=62.92 Aligned_cols=105 Identities=14% Similarity=0.151 Sum_probs=70.9
Q ss_pred CCEEEEEcc-cHHHHHHHHHHccCCCeE-EEEcCCCCChhHHHhhCCeecCCHHhhcc--cCCEEEEcCCCChhhhhccc
Q 027408 36 GKTVGTVGC-GRIGKLLLQRLKPFNCNL-LYHDRVKMDPQLEKETGAKFEEDLDTMLP--KCDIVVVNTPLTEKTRGMFD 111 (223)
Q Consensus 36 g~~igIiG~-G~iG~~iA~~l~~~G~~V-~~~d~~~~~~~~~~~~g~~~~~~l~e~l~--~aDvVv~~~p~~~~t~~~i~ 111 (223)
.++|+|+|+ |++|+.+++.++..|+++ ..++|..... ...|+..+.+++++.+ .+|++++++| ++...-+-
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~VnP~~~g~---~i~G~~vy~sl~el~~~~~~Dv~Ii~vp--~~~~~~~~ 81 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGM---EVLGVPVYDTVKEAVAHHEVDASIIFVP--APAAADAA 81 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTC---EETTEEEESSHHHHHHHSCCSEEEECCC--HHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHcCCeEEEEECCCCCCc---eECCEEeeCCHHHHhhcCCCCEEEEecC--HHHHHHHH
Confidence 568999998 999999999998889984 3667653111 1357777789999988 8999999999 33322222
Q ss_pred HHHHhcCCCCcE-EEEcCCCCc-cCHHHHHHHHHhCCcc
Q 027408 112 KDRIAKMKKGVL-IVNNARGAI-MDTQAVVDACSSGHIA 148 (223)
Q Consensus 112 ~~~~~~mk~ga~-ivn~srg~~-vd~~al~~~L~~g~i~ 148 (223)
++..+ .|.- +|..+.|-. .+++.+.++.++..+.
T Consensus 82 ~ea~~---~Gi~~vVi~t~G~~~~~~~~l~~~a~~~gi~ 117 (288)
T 1oi7_A 82 LEAAH---AGIPLIVLITEGIPTLDMVRAVEEIKALGSR 117 (288)
T ss_dssp HHHHH---TTCSEEEECCSCCCHHHHHHHHHHHHHHTCE
T ss_pred HHHHH---CCCCEEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 33333 2332 555665532 3455788887776664
No 277
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=97.71 E-value=0.00015 Score=64.69 Aligned_cols=110 Identities=14% Similarity=0.222 Sum_probs=74.3
Q ss_pred ccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEc--------CCCCChhH------------------HHhhCCeecC
Q 027408 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHD--------RVKMDPQL------------------EKETGAKFEE 84 (223)
Q Consensus 31 ~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d--------~~~~~~~~------------------~~~~g~~~~~ 84 (223)
+.+|.|+||+|-|+|++|...|+.|...|.+|++++ +.....+. ....+...+
T Consensus 230 ~~~l~Gk~vaVQG~GnVG~~aa~~L~e~GakvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~~~~g~~~~- 308 (450)
T 4fcc_A 230 GMGFEGMRVSVSGSGNVAQYAIEKAMEFGARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVADYAKEFGLVYL- 308 (450)
T ss_dssp TCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHHHHHHTCEEE-
T ss_pred CCCcCCCEEEEeCCChHHHHHHHHHHhcCCeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccccccccCCcEEe-
Confidence 457899999999999999999999999999987543 33222211 112234333
Q ss_pred CHHhhc-ccCCEEEEcCCCChhhhhcccHHHHhcCCCC--cEEEEcCCCCccCHHHHHHHHHhCCcc
Q 027408 85 DLDTML-PKCDIVVVNTPLTEKTRGMFDKDRIAKMKKG--VLIVNNARGAIMDTQAVVDACSSGHIA 148 (223)
Q Consensus 85 ~l~e~l-~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~g--a~ivn~srg~~vd~~al~~~L~~g~i~ 148 (223)
+.++++ -+||+.+-|.- .+.|+.+..+.++.. .++++.+.+.+ ..++ .+.|.+..|.
T Consensus 309 ~~~~i~~~~~DI~iPcAl-----~~~I~~~~a~~L~a~g~k~IaEgAN~p~-t~eA-~~iL~~rGIl 368 (450)
T 4fcc_A 309 EGQQPWSVPVDIALPCAT-----QNELDVDAAHQLIANGVKAVAEGANMPT-TIEA-TELFQQAGVL 368 (450)
T ss_dssp ETCCGGGSCCSEEEECSC-----TTCBCHHHHHHHHHTTCCEEECCSSSCB-CHHH-HHHHHHTTCE
T ss_pred cCcccccCCccEEeeccc-----cccccHHHHHHHHhcCceEEecCCCCCC-CHHH-HHHHHHCCCE
Confidence 223333 46999988875 567888888888643 46777776664 4444 3567776666
No 278
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=97.71 E-value=7.8e-05 Score=62.49 Aligned_cols=97 Identities=16% Similarity=0.231 Sum_probs=65.6
Q ss_pred ccCCCCCEEEEEcccHHHHHHHHHHccCCC-eEEEEcCCCCC-hhHHHhhC----CeecCCHHhhcccCCEEEEcCCCCh
Q 027408 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMD-PQLEKETG----AKFEEDLDTMLPKCDIVVVNTPLTE 104 (223)
Q Consensus 31 ~~~l~g~~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~-~~~~~~~g----~~~~~~l~e~l~~aDvVv~~~p~~~ 104 (223)
+.++.++++.|+|.|..+++++..|...|. +|.+++|+... .+.++.++ ........+.++++|+|+.++|..-
T Consensus 120 g~~~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~ra~~la~~~~~~~~~~~~~~~~~~~~~~dliiNaTp~Gm 199 (269)
T 3tum_A 120 GFEPAGKRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGAVCELLGNGFPGLTVSTQFSGLEDFDLVANASPVGM 199 (269)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHHCTTCEEESCCSCSTTCSEEEECSSTTC
T ss_pred CCCcccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHHHhccCCcceehhhhhhhhcccccccCCcccc
Confidence 457899999999999999999999999886 69999997522 22222221 1111222344678999999999543
Q ss_pred hh--hhcccHHHHhcCCCCcEEEEc
Q 027408 105 KT--RGMFDKDRIAKMKKGVLIVNN 127 (223)
Q Consensus 105 ~t--~~~i~~~~~~~mk~ga~ivn~ 127 (223)
.. ..-++...++.++++.++.|+
T Consensus 200 ~~~~~~p~~~~~~~~l~~~~~v~D~ 224 (269)
T 3tum_A 200 GTRAELPLSAALLATLQPDTLVADV 224 (269)
T ss_dssp STTCCCSSCHHHHHTCCTTSEEEEC
T ss_pred CCCCCCCCChHHHhccCCCcEEEEE
Confidence 22 122556667777777766655
No 279
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=97.70 E-value=0.0001 Score=62.59 Aligned_cols=96 Identities=22% Similarity=0.180 Sum_probs=62.3
Q ss_pred CEEEEEcccHHHHHHHHHHccCCC--eEEEEcCCCCChh-----HHHh---h--C--CeecCCHHhhcccCCEEEEcCCC
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQ-----LEKE---T--G--AKFEEDLDTMLPKCDIVVVNTPL 102 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~-----~~~~---~--g--~~~~~~l~e~l~~aDvVv~~~p~ 102 (223)
++|+|||.|.+|.++|..+...|. +|..||+++...+ .... + . +....+ .+.+++||+|+++.+.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDiVViaag~ 79 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSEIIVVTAGL 79 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTTCSEEEECCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCCCCEEEECCCC
Confidence 589999999999999999987777 8999999752221 1111 1 1 222345 7889999999998753
Q ss_pred C--h-hhh-hcc--c----H---HHHhcCCCCcEEEEcCCCCccCH
Q 027408 103 T--E-KTR-GMF--D----K---DRIAKMKKGVLIVNNARGAIMDT 135 (223)
Q Consensus 103 ~--~-~t~-~~i--~----~---~~~~~mk~ga~ivn~srg~~vd~ 135 (223)
. | .++ .++ | + +.+....|++++++++ ..+|.
T Consensus 80 ~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs--NPvd~ 123 (294)
T 1oju_A 80 ARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT--NPMDV 123 (294)
T ss_dssp CCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS--SSHHH
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC--CcchH
Confidence 2 1 111 111 1 1 2334447899999998 34444
No 280
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=97.68 E-value=9.9e-05 Score=59.57 Aligned_cols=73 Identities=25% Similarity=0.288 Sum_probs=52.5
Q ss_pred ccCCCCCEEEEEcc-cHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCC-eec-----CCHHhhcccCCEEEEcCCCC
Q 027408 31 AYDLEGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA-KFE-----EDLDTMLPKCDIVVVNTPLT 103 (223)
Q Consensus 31 ~~~l~g~~igIiG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~-~~~-----~~l~e~l~~aDvVv~~~p~~ 103 (223)
...+.||+|.|.|. |.||+.+++.|...|++|++++|++...+.....++ ..+ .++.+.+..+|+|+.+....
T Consensus 16 ~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag~~ 95 (236)
T 3e8x_A 16 NLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFAAGSG 95 (236)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEECCCCC
T ss_pred ccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEECCCCC
Confidence 45789999999997 999999999999999999999997643333333344 221 45677888999999887643
No 281
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=97.67 E-value=0.00021 Score=61.61 Aligned_cols=96 Identities=11% Similarity=0.108 Sum_probs=72.9
Q ss_pred CCCCCEEEEEccc--HHHHHHHHHHccCCCeEEEEcCCCC--ChhH---H----HhhC--CeecCCHHhhcccCCEEEEc
Q 027408 33 DLEGKTVGTVGCG--RIGKLLLQRLKPFNCNLLYHDRVKM--DPQL---E----KETG--AKFEEDLDTMLPKCDIVVVN 99 (223)
Q Consensus 33 ~l~g~~igIiG~G--~iG~~iA~~l~~~G~~V~~~d~~~~--~~~~---~----~~~g--~~~~~~l~e~l~~aDvVv~~ 99 (223)
.|.|.+|+++|=| +++++++..+..+|++|.+..|... ..+. + +..| +....+++++++++|+|...
T Consensus 152 ~l~gl~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd 231 (335)
T 1dxh_A 152 PLHDISYAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTEDPKEAVKGVDFVHTD 231 (335)
T ss_dssp CGGGCEEEEESCCSSHHHHHHHHHHHHTTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEEC
T ss_pred CcCCeEEEEecCCccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEeC
Confidence 5889999999985 9999999999999999999998642 2222 1 1445 44568999999999999884
Q ss_pred CCC--------Chh-----hhhcccHHHHhcC-CCCcEEEEcC
Q 027408 100 TPL--------TEK-----TRGMFDKDRIAKM-KKGVLIVNNA 128 (223)
Q Consensus 100 ~p~--------~~~-----t~~~i~~~~~~~m-k~ga~ivn~s 128 (223)
.=. ..+ ...-++.+.++.+ |++++|..+.
T Consensus 232 ~w~smg~~~e~~~er~~~~~~y~v~~~ll~~a~~~~ai~mHcL 274 (335)
T 1dxh_A 232 VWVSMGEPVEAWGERIKELLPYQVNMEIMKATGNPRAKFMHCL 274 (335)
T ss_dssp CCSCSSSCGGGCHHHHHHHGGGCBCHHHHHTTCCSSCEEEECS
T ss_pred CccccCccchhhHHHHHHhhcceeCHHHHHhccCCCeEEECCC
Confidence 320 011 1245788999999 9999998874
No 282
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=97.66 E-value=0.00012 Score=62.38 Aligned_cols=64 Identities=19% Similarity=0.267 Sum_probs=47.2
Q ss_pred CEEEEEcccHHHHHHHHHHccCCC-eEEEEcCCCCChhH-HHh-------h--C--CeecCCHHhhcccCCEEEEcCC
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQL-EKE-------T--G--AKFEEDLDTMLPKCDIVVVNTP 101 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~-~~~-------~--g--~~~~~~l~e~l~~aDvVv~~~p 101 (223)
++|+|||.|.+|..+|..+...|. +|..+|+++...+. ..+ . . +....+. +.+++||+|+++.+
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~a~g 79 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTANSDVIVVTSG 79 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTCSEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCCCCEEEEcCC
Confidence 589999999999999999988886 89999987532221 111 0 1 2222566 67899999999975
No 283
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=97.66 E-value=7e-05 Score=64.09 Aligned_cols=87 Identities=14% Similarity=0.127 Sum_probs=57.4
Q ss_pred CEEEEEcccHHHHHHHHHHcc--CCCe-EEEEcCCCCC--hhHHHhhCCee-cCCHHhhcc-----cCCEEEEcCCCChh
Q 027408 37 KTVGTVGCGRIGKLLLQRLKP--FNCN-LLYHDRVKMD--PQLEKETGAKF-EEDLDTMLP-----KCDIVVVNTPLTEK 105 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~--~G~~-V~~~d~~~~~--~~~~~~~g~~~-~~~l~e~l~-----~aDvVv~~~p~~~~ 105 (223)
.+|||||+|.||+.+++.+.. -+.+ +.++|+++.. .+.++.+++.. .++.+++++ +.|+|+.++| ..
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~~~~e~ll~~~~~~~iDvV~~atp--~~ 82 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDATS--AS 82 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESSHHHHHHHSGGGGGEEEEEECSC--HH
T ss_pred CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCcccCCHHHHHhccCCCCCcEEEECCC--hH
Confidence 489999999999999999843 4666 4578887654 34556677652 456777753 5899999999 33
Q ss_pred hhhcccHHHHhcCCCCcEEEE
Q 027408 106 TRGMFDKDRIAKMKKGVLIVN 126 (223)
Q Consensus 106 t~~~i~~~~~~~mk~ga~ivn 126 (223)
...-+....++. ++|..+++
T Consensus 83 ~h~~~a~~al~a-~~Gk~Vi~ 102 (312)
T 1nvm_B 83 AHVQNEALLRQA-KPGIRLID 102 (312)
T ss_dssp HHHHHHHHHHHH-CTTCEEEE
T ss_pred HHHHHHHHHHHh-CCCCEEEE
Confidence 222222222221 23777777
No 284
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=97.66 E-value=6.4e-05 Score=65.47 Aligned_cols=91 Identities=16% Similarity=0.230 Sum_probs=69.0
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeec---CC---HHhhcccCCEEEEcCCCChhhhh
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE---ED---LDTMLPKCDIVVVNTPLTEKTRG 108 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~---~~---l~e~l~~aDvVv~~~p~~~~t~~ 108 (223)
.|.+|.|+|.|.+|...++.++.+|++|++.++++...+.++++|...+ .+ .+++....|+|+.++....
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~g~Dvvid~~g~~~---- 269 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPH---- 269 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECCSSCC----
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhhcCCCEEEECCCCHH----
Confidence 5899999999999999999999999999999987766677777886432 12 2233356899998887321
Q ss_pred cccHHHHhcCCCCcEEEEcCCC
Q 027408 109 MFDKDRIAKMKKGVLIVNNARG 130 (223)
Q Consensus 109 ~i~~~~~~~mk~ga~ivn~srg 130 (223)
.....++.++++..++.++..
T Consensus 270 -~~~~~~~~l~~~G~iv~~G~~ 290 (369)
T 1uuf_A 270 -NLDDFTTLLKRDGTMTLVGAP 290 (369)
T ss_dssp -CHHHHHTTEEEEEEEEECCCC
T ss_pred -HHHHHHHHhccCCEEEEeccC
Confidence 125677888999899888753
No 285
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=97.65 E-value=7.6e-05 Score=63.96 Aligned_cols=113 Identities=18% Similarity=0.201 Sum_probs=64.8
Q ss_pred CCEEEEEcccHHHHHHHHHHccCCC--eEEEEcCCCCChh-HHHhh--C------CeecCCHHhhcccCCEEEEcCCCCh
Q 027408 36 GKTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQ-LEKET--G------AKFEEDLDTMLPKCDIVVVNTPLTE 104 (223)
Q Consensus 36 g~~igIiG~G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~-~~~~~--g------~~~~~~l~e~l~~aDvVv~~~p~~~ 104 (223)
.++|+|||.|.+|..++..+...|. +|..+|.+....+ ...++ . +....+..+.+++||+|+++.+...
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~~g~p~ 86 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVTAGANR 86 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEECCCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECCHHHhCCCCEEEEcCCCCC
Confidence 4689999999999999999988777 8999998753221 12211 1 1111123566899999999987422
Q ss_pred hhhhc---------------ccHHHHhcCCCCcEEEEcCCCCccCHHHHHHH--HHhCCccEE
Q 027408 105 KTRGM---------------FDKDRIAKMKKGVLIVNNARGAIMDTQAVVDA--CSSGHIAGY 150 (223)
Q Consensus 105 ~t~~~---------------i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~--L~~g~i~~a 150 (223)
. .+. +.+. +....|++++++++..-=+....+.+. +...++.|.
T Consensus 87 k-~g~~r~dl~~~n~~i~~~i~~~-i~~~~p~a~viv~tNPv~~~~~~~~k~s~~p~~rviG~ 147 (318)
T 1y6j_A 87 K-PGETRLDLAKKNVMIAKEVTQN-IMKYYNHGVILVVSNPVDIITYMIQKWSGLPVGKVIGS 147 (318)
T ss_dssp -----CHHHHHHHHHHHHHHHHHH-HHHHCCSCEEEECSSSHHHHHHHHHHHHTCCTTTEEEC
T ss_pred C-CCcCHHHHHHhhHHHHHHHHHH-HHHhCCCcEEEEecCcHHHHHHHHHHHcCCCHHHEecc
Confidence 1 111 1122 222368999999754322223333333 233466665
No 286
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=97.65 E-value=0.00019 Score=62.27 Aligned_cols=91 Identities=16% Similarity=0.113 Sum_probs=68.8
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCC-eEEEEcCCCCChhHHHhhCCeec-------CCHHhhcc-----cCCEEEEcCC
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFE-------EDLDTMLP-----KCDIVVVNTP 101 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~-------~~l~e~l~-----~aDvVv~~~p 101 (223)
.|++|.|+|.|.+|...++.++.+|+ +|++.++++...+.++++|...+ .++.+.+. ..|+|+-++.
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g 271 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVG 271 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEECCC
Confidence 58999999999999999999999999 79999988766677777876422 12333332 4899999886
Q ss_pred CChhhhhcccHHHHhcCCCC-cEEEEcCCC
Q 027408 102 LTEKTRGMFDKDRIAKMKKG-VLIVNNARG 130 (223)
Q Consensus 102 ~~~~t~~~i~~~~~~~mk~g-a~ivn~srg 130 (223)
..+ .....++.++++ ..++.++-.
T Consensus 272 ~~~-----~~~~~~~~l~~~~G~iv~~G~~ 296 (374)
T 1cdo_A 272 NVG-----VMRNALESCLKGWGVSVLVGWT 296 (374)
T ss_dssp CHH-----HHHHHHHTBCTTTCEEEECSCC
T ss_pred CHH-----HHHHHHHHhhcCCcEEEEEcCC
Confidence 311 125778889998 888888643
No 287
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=97.65 E-value=0.00042 Score=59.09 Aligned_cols=96 Identities=14% Similarity=0.106 Sum_probs=71.1
Q ss_pred CCC-CCEEEEEc-ccHHHHHHHHHHccCCCeEEEEcCCCC-Ch-hHH---H----hhC--CeecCCHHhhcccCCEEEEc
Q 027408 33 DLE-GKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKM-DP-QLE---K----ETG--AKFEEDLDTMLPKCDIVVVN 99 (223)
Q Consensus 33 ~l~-g~~igIiG-~G~iG~~iA~~l~~~G~~V~~~d~~~~-~~-~~~---~----~~g--~~~~~~l~e~l~~aDvVv~~ 99 (223)
.+. |.+|++|| .+++.++++..+..+|++|.+..|... .. +.. + ..| +....++++.++++|+|...
T Consensus 142 ~l~~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvyt~ 221 (307)
T 3tpf_A 142 MQNGIAKVAFIGDSNNMCNSWLITAAILGFEISIAMPKNYKISPEIWEFAMKQALISGAKISLGYDKFEALKDKDVVITD 221 (307)
T ss_dssp CGGGCCEEEEESCSSHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEEC
T ss_pred CCCCCCEEEEEcCCCccHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEec
Confidence 578 99999999 578999999999999999999998642 22 221 1 334 34567999999999999876
Q ss_pred CC--CCh--h--------hhhcccHHHHhcCCCCcEEEEcC
Q 027408 100 TP--LTE--K--------TRGMFDKDRIAKMKKGVLIVNNA 128 (223)
Q Consensus 100 ~p--~~~--~--------t~~~i~~~~~~~mk~ga~ivn~s 128 (223)
.= -.. + ...-++.+.++.+|++++|..+.
T Consensus 222 ~w~smg~e~~~~~~~~~~~~y~v~~e~l~~a~~~ai~mH~l 262 (307)
T 3tpf_A 222 TWVSMGEENEKERKIKEFEGFMIDEKAMSVANKDAILLHCL 262 (307)
T ss_dssp CSSCTTGGGGHHHHHHHTGGGCBCHHHHHHSCTTCEEEECS
T ss_pred CcccCCchhhHHHHHHHhcccccCHHHHHhcCCCcEEECCC
Confidence 51 111 0 12447888888888888888775
No 288
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=97.64 E-value=0.00019 Score=62.40 Aligned_cols=90 Identities=17% Similarity=0.107 Sum_probs=67.6
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCC-eEEEEcCCCCChhHHHhhCCeec-------CCHHhhcc-----cCCEEEEcCC
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFE-------EDLDTMLP-----KCDIVVVNTP 101 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~-------~~l~e~l~-----~aDvVv~~~p 101 (223)
.|++|.|+|.|.+|...++.++.+|. +|++.++++...+.++++|...+ .++.+.+. ..|+|+-++.
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g 270 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIG 270 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEECCC
Confidence 58999999999999999999999999 79999987766677777776422 12333332 4799998887
Q ss_pred CChhhhhcccHHHHhcCCCC-cEEEEcCC
Q 027408 102 LTEKTRGMFDKDRIAKMKKG-VLIVNNAR 129 (223)
Q Consensus 102 ~~~~t~~~i~~~~~~~mk~g-a~ivn~sr 129 (223)
.. . .....++.++++ ..++.++-
T Consensus 271 ~~-~----~~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 271 RL-D----TMVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp CH-H----HHHHHHHHBCTTTCEEEECSC
T ss_pred CH-H----HHHHHHHHhhcCCcEEEEecc
Confidence 21 1 125677888998 88888764
No 289
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=97.64 E-value=0.00018 Score=62.42 Aligned_cols=90 Identities=17% Similarity=0.063 Sum_probs=68.3
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCC-eEEEEcCCCCChhHHHhhCCeec-------CCHHhhcc-----cCCEEEEcCC
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFE-------EDLDTMLP-----KCDIVVVNTP 101 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~-------~~l~e~l~-----~aDvVv~~~p 101 (223)
.|.+|.|+|.|.+|...++.++.+|. +|++.++++...+.++++|+..+ .++.+.+. ..|+|+-++.
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g 270 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAG 270 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCC
Confidence 58899999999999999999999999 79999988766777778886432 12333332 5899999886
Q ss_pred CChhhhhcccHHHHhcCCCC-cEEEEcCC
Q 027408 102 LTEKTRGMFDKDRIAKMKKG-VLIVNNAR 129 (223)
Q Consensus 102 ~~~~t~~~i~~~~~~~mk~g-a~ivn~sr 129 (223)
. +.+ -...++.++++ ..++.++-
T Consensus 271 ~-~~~----~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 271 R-IET----MMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp C-HHH----HHHHHHTBCTTTCEEEECCC
T ss_pred C-HHH----HHHHHHHHhcCCCEEEEEcc
Confidence 2 111 25778889998 88888864
No 290
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=97.64 E-value=0.00013 Score=63.56 Aligned_cols=84 Identities=17% Similarity=0.169 Sum_probs=56.6
Q ss_pred CEEEEEc-ccHHHHH-HH----HHHccCC-CeE----------EEEcCCCC-ChhHHHhhCCe-ecCCHHhhccc--CCE
Q 027408 37 KTVGTVG-CGRIGKL-LL----QRLKPFN-CNL----------LYHDRVKM-DPQLEKETGAK-FEEDLDTMLPK--CDI 95 (223)
Q Consensus 37 ~~igIiG-~G~iG~~-iA----~~l~~~G-~~V----------~~~d~~~~-~~~~~~~~g~~-~~~~l~e~l~~--aDv 95 (223)
.+||||| +|.||+. .+ +.++..+ ..+ .++|+++. ..+.++++++. .++++++++++ .|+
T Consensus 7 irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~iD~ 86 (383)
T 3oqb_A 7 LGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEALAKRFNIARWTTDLDAALADKNDTM 86 (383)
T ss_dssp EEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHHHHHHHHTTCCCEESCHHHHHHCSSCCE
T ss_pred eEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCE
Confidence 4799999 9999998 66 6665443 222 48888763 33445667874 66899999965 899
Q ss_pred EEEcCCCChhhhhcccHHHHhcCCCCcEEE
Q 027408 96 VVVNTPLTEKTRGMFDKDRIAKMKKGVLIV 125 (223)
Q Consensus 96 Vv~~~p~~~~t~~~i~~~~~~~mk~ga~iv 125 (223)
|++++|..... +-....++.|..++
T Consensus 87 V~i~tp~~~h~-----~~~~~al~~Gk~V~ 111 (383)
T 3oqb_A 87 FFDAATTQARP-----GLLTQAINAGKHVY 111 (383)
T ss_dssp EEECSCSSSSH-----HHHHHHHTTTCEEE
T ss_pred EEECCCchHHH-----HHHHHHHHCCCeEE
Confidence 99999943222 33344455555544
No 291
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=97.64 E-value=0.00021 Score=62.10 Aligned_cols=90 Identities=14% Similarity=0.041 Sum_probs=68.1
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCC-eEEEEcCCCCChhHHHhhCCeec-------CCHHhhcc-----cCCEEEEcCC
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFE-------EDLDTMLP-----KCDIVVVNTP 101 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~-------~~l~e~l~-----~aDvVv~~~p 101 (223)
.|.+|.|+|.|.+|...++.++.+|. +|++.++++...+.++++|+..+ .++.+.+. ..|+|+-++.
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G 274 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAG 274 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEECCC
Confidence 58999999999999999999999999 79999988766677777886432 12333332 4899998886
Q ss_pred CChhhhhcccHHHHhcCCCC-cEEEEcCC
Q 027408 102 LTEKTRGMFDKDRIAKMKKG-VLIVNNAR 129 (223)
Q Consensus 102 ~~~~t~~~i~~~~~~~mk~g-a~ivn~sr 129 (223)
. +. .-...++.++++ ..++.++-
T Consensus 275 ~-~~----~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 275 T-AQ----TLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp C-HH----HHHHHHHTBCTTTCEEEECCC
T ss_pred C-HH----HHHHHHHHhhcCCCEEEEECC
Confidence 2 11 125778889998 88888764
No 292
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=97.63 E-value=6.4e-05 Score=65.09 Aligned_cols=93 Identities=24% Similarity=0.179 Sum_probs=69.4
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecC------CHHhhc-ccCCEEEEcCCCChhhh
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEE------DLDTML-PKCDIVVVNTPLTEKTR 107 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~------~l~e~l-~~aDvVv~~~p~~~~t~ 107 (223)
.|.+|.|+|.|.+|...++.++.+|++|++.++++...+.++++|...+- ++.+.+ ...|+|+.++..++
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~D~vid~~g~~~--- 255 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLT--- 255 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEECCSCST---
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhhcCCCEEEECCCCCc---
Confidence 58999999999999999999999999999999887777777788864321 232323 46899999987410
Q ss_pred hcccHHHHhcCCCCcEEEEcCCC
Q 027408 108 GMFDKDRIAKMKKGVLIVNNARG 130 (223)
Q Consensus 108 ~~i~~~~~~~mk~ga~ivn~srg 130 (223)
...-...++.++++..++.++..
T Consensus 256 ~~~~~~~~~~l~~~G~iv~~g~~ 278 (360)
T 1piw_A 256 DIDFNIMPKAMKVGGRIVSISIP 278 (360)
T ss_dssp TCCTTTGGGGEEEEEEEEECCCC
T ss_pred HHHHHHHHHHhcCCCEEEEecCC
Confidence 01124556788888888888653
No 293
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=97.62 E-value=3.7e-05 Score=68.98 Aligned_cols=69 Identities=22% Similarity=0.220 Sum_probs=49.3
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChh-HHHhhC-Ce----ecC---CHHhhcccCCEEEEcCCCC
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQ-LEKETG-AK----FEE---DLDTMLPKCDIVVVNTPLT 103 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~-~~~~~g-~~----~~~---~l~e~l~~aDvVv~~~p~~ 103 (223)
.+++|+|+|.|.||+.+++.|...|.+|.+++|+....+ .+..++ +. ... +++++++++|+|+.++|..
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~ 79 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYT 79 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCccc
Confidence 478999999999999999999999999999998642111 111121 11 122 4557788999999999853
No 294
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=97.60 E-value=4.2e-05 Score=66.36 Aligned_cols=93 Identities=17% Similarity=0.232 Sum_probs=68.1
Q ss_pred CCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCC---CChhHHHhhCCeecC--CHHhhc----ccCCEEEEcCCCC
Q 027408 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVK---MDPQLEKETGAKFEE--DLDTML----PKCDIVVVNTPLT 103 (223)
Q Consensus 33 ~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~---~~~~~~~~~g~~~~~--~l~e~l----~~aDvVv~~~p~~ 103 (223)
.+.|++|.|+|.|.+|..+++.++.+|++|++.+++. ...+.++++|+..++ ++.+.+ ...|+|+.++...
T Consensus 178 ~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~ 257 (366)
T 2cdc_A 178 TLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKFDVIIDATGAD 257 (366)
T ss_dssp SSTTCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEEECTTCSHHHHHHHCCEEEEEECCCCC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCceechHHHHHHHHHhCCCCCEEEECCCCh
Confidence 4679999999999999999999999999999999876 445566677765431 111111 3589999888733
Q ss_pred hhhhhcccHHHHhcCCCCcEEEEcCC
Q 027408 104 EKTRGMFDKDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 104 ~~t~~~i~~~~~~~mk~ga~ivn~sr 129 (223)
+.. + ...++.|+++..+++++.
T Consensus 258 ~~~---~-~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 258 VNI---L-GNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp THH---H-HHHGGGEEEEEEEEECSC
T ss_pred HHH---H-HHHHHHHhcCCEEEEEec
Confidence 221 0 566788888888888864
No 295
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=97.60 E-value=0.00018 Score=61.79 Aligned_cols=96 Identities=16% Similarity=0.276 Sum_probs=61.1
Q ss_pred CCCCEEEEEcccHHHHHHHHHHccCCC-eEEEEcCCCCChh-----HHHh-----hC--CeecCCHHhhcccCCEEEEcC
Q 027408 34 LEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQ-----LEKE-----TG--AKFEEDLDTMLPKCDIVVVNT 100 (223)
Q Consensus 34 l~g~~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~-----~~~~-----~g--~~~~~~l~e~l~~aDvVv~~~ 100 (223)
...++|+|||.|.+|..+|..+...|+ +|..+|+++...+ .... .. +....+. +.+++||+|+++.
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~a~~~aDiVIiaa 83 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-AAIEGADVVIVTA 83 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-GGGTTCSEEEECC
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-HHHCCCCEEEEcc
Confidence 456799999999999999999988887 9999999764321 1111 12 2223455 7889999999997
Q ss_pred CCC--hh-hh-hcc--c----HH---HHhcCCCCcEEEEcCCC
Q 027408 101 PLT--EK-TR-GMF--D----KD---RIAKMKKGVLIVNNARG 130 (223)
Q Consensus 101 p~~--~~-t~-~~i--~----~~---~~~~mk~ga~ivn~srg 130 (223)
+.. +. ++ .++ | ++ .+....|++++++++..
T Consensus 84 g~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtNP 126 (324)
T 3gvi_A 84 GVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNP 126 (324)
T ss_dssp SCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred CcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCCC
Confidence 521 11 11 011 1 11 22223588999999853
No 296
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=97.60 E-value=0.0002 Score=61.01 Aligned_cols=93 Identities=18% Similarity=0.277 Sum_probs=69.7
Q ss_pred CCCCCEEEEEcc---cHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCCh-----
Q 027408 33 DLEGKTVGTVGC---GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTE----- 104 (223)
Q Consensus 33 ~l~g~~igIiG~---G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~----- 104 (223)
.+.|.+|++||- +++.++++..+..+|++|.+..|.....+. ...| ...+++++++++|+|....--.+
T Consensus 144 ~l~glkva~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~-~~~g--~~~d~~eav~~aDvvyt~~~q~er~~~~ 220 (304)
T 3r7f_A 144 TFKGLTVSIHGDIKHSRVARSNAEVLTRLGARVLFSGPSEWQDEE-NTFG--TYVSMDEAVESSDVVMLLRIQNERHQSA 220 (304)
T ss_dssp CCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGGSCTT-CSSC--EECCHHHHHHHCSEEEECCCCTTTCCSS
T ss_pred CCCCCEEEEEcCCCCcchHHHHHHHHHHcCCEEEEECCCccCcch-hhcC--ccCCHHHHhCCCCEEEeccchhhccccc
Confidence 589999999996 479999999999999999999885422221 2223 34689999999999987532111
Q ss_pred ----h--hhhcccHHHHhcCCCCcEEEEcC
Q 027408 105 ----K--TRGMFDKDRIAKMKKGVLIVNNA 128 (223)
Q Consensus 105 ----~--t~~~i~~~~~~~mk~ga~ivn~s 128 (223)
+ ...-++.+.++.+|++++|..+.
T Consensus 221 ~~~~~~~~~y~v~~~~l~~a~~~ai~mHcl 250 (304)
T 3r7f_A 221 VSQEGYLNKYGLTVERAERMKRHAIIMHPA 250 (304)
T ss_dssp CCSTTHHHHHSBCHHHHTTSCTTCEEECCS
T ss_pred hhHHHHhCCCccCHHHHhhcCCCCEEECCC
Confidence 1 13457899999999999998774
No 297
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=97.60 E-value=0.00016 Score=61.66 Aligned_cols=96 Identities=19% Similarity=0.282 Sum_probs=68.9
Q ss_pred CCCCCEEEEEcc---cHHHHHHHHHHccCCCeEEEEcCCCC-Chh-H---HHhhCC--eecCCHHhhcccCCEEEEcCCC
Q 027408 33 DLEGKTVGTVGC---GRIGKLLLQRLKPFNCNLLYHDRVKM-DPQ-L---EKETGA--KFEEDLDTMLPKCDIVVVNTPL 102 (223)
Q Consensus 33 ~l~g~~igIiG~---G~iG~~iA~~l~~~G~~V~~~d~~~~-~~~-~---~~~~g~--~~~~~l~e~l~~aDvVv~~~p~ 102 (223)
.+.|.+|++||= |++.++++..+..+|++|.+..|... ..+ . +++.|. ....+++++++++|+|....=-
T Consensus 152 ~l~gl~va~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q 231 (308)
T 1ml4_A 152 RIDGLKIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELREKGMKVVETTTLEDVIGKLDVLYVTRIQ 231 (308)
T ss_dssp CSSSEEEEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCTHHHHTTCSEEEECCCC
T ss_pred CCCCeEEEEeCCCCcCchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECCcc
Confidence 589999999997 59999999999999999999998642 222 2 223343 3457899999999999885531
Q ss_pred C------hhh-----hhcccHHHHhcCCCCcEEEEcC
Q 027408 103 T------EKT-----RGMFDKDRIAKMKKGVLIVNNA 128 (223)
Q Consensus 103 ~------~~t-----~~~i~~~~~~~mk~ga~ivn~s 128 (223)
. ++. ..-++.+.++.+|++++|..+.
T Consensus 232 ~er~~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~l 268 (308)
T 1ml4_A 232 KERFPDEQEYLKVKGSYQVNLKVLEKAKDELRIMHPL 268 (308)
T ss_dssp GGGSSSHHHHHTTTTCCCBCTTGGGGSCTTCEEECCS
T ss_pred ccccCCHHHHHHHhcCcccCHHHHhhcCCCCEEECCC
Confidence 1 111 2345667777777777776653
No 298
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=97.60 E-value=0.00023 Score=60.97 Aligned_cols=93 Identities=12% Similarity=0.203 Sum_probs=59.8
Q ss_pred CEEEEEcccHHHHHHHHHHccCCC--eEEEEcCCCCChh-----HHHh-----hCCeec-CCHHhhcccCCEEEEcCCCC
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQ-----LEKE-----TGAKFE-EDLDTMLPKCDIVVVNTPLT 103 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~-----~~~~-----~g~~~~-~~l~e~l~~aDvVv~~~p~~ 103 (223)
++|+|||.|.||..+|..+...|. +|..+|+++...+ +... ...... ++..+.+++||+|+++.+..
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~~aDvVii~ag~~ 80 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTNDYGPTEDSDVCIITAGLP 80 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGGTTCSEEEECCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCCHHHhCCCCEEEECCCCC
Confidence 589999999999999999987676 8999999763221 1110 122221 24567889999999997632
Q ss_pred hh-----------hhhccc--HHHHhcCCCCcEEEEcCC
Q 027408 104 EK-----------TRGMFD--KDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 104 ~~-----------t~~~i~--~~~~~~mk~ga~ivn~sr 129 (223)
.. +..++. .+.+....|++++++++.
T Consensus 81 ~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN 119 (314)
T 3nep_X 81 RSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVAN 119 (314)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred CCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCC
Confidence 11 111110 123334468899999985
No 299
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=97.59 E-value=0.00044 Score=60.23 Aligned_cols=97 Identities=13% Similarity=0.131 Sum_probs=71.6
Q ss_pred CCCCCEEEEEccc--HHHHHHHHHHccCCCeEEEEcCCCCC----hhH-------HHhhC--CeecCCHHhhcccCCEEE
Q 027408 33 DLEGKTVGTVGCG--RIGKLLLQRLKPFNCNLLYHDRVKMD----PQL-------EKETG--AKFEEDLDTMLPKCDIVV 97 (223)
Q Consensus 33 ~l~g~~igIiG~G--~iG~~iA~~l~~~G~~V~~~d~~~~~----~~~-------~~~~g--~~~~~~l~e~l~~aDvVv 97 (223)
.+.|++|++||=+ +++.+++..+..+|++|.+..|.... .+. +++.| +....+++++++++|+|.
T Consensus 177 ~l~glkva~vGD~~nnva~Sl~~~~~~lG~~v~~~~P~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~d~~eav~~aDVVy 256 (365)
T 4amu_A 177 NLKNKKIVFIGDYKNNVGVSTMIGAAFNGMHVVMCGPDNYKNEIDKNVLAKCIELFKRNGGSLRFSTDKILAAQDADVIY 256 (365)
T ss_dssp SCTTCEEEEESSTTSHHHHHHHHHHHHTTCEEEEESCGGGGGGSCHHHHHHHHHHHHHHSCEEEEESCHHHHTTTCSEEE
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHHcCCEEEEECCccccCCCcHHHHHHHHHHHHHcCCEEEEECCHHHHhcCCCEEE
Confidence 4899999999976 89999999999999999999986422 221 23345 345689999999999998
Q ss_pred EcC----CCChh---------hhhcccHHHHhcCCCCcEEEEcCC
Q 027408 98 VNT----PLTEK---------TRGMFDKDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 98 ~~~----p~~~~---------t~~~i~~~~~~~mk~ga~ivn~sr 129 (223)
.-+ ....+ ...-++.+.++.+|++++|..+.-
T Consensus 257 td~W~smg~~~~~~~er~~~~~~y~vt~ell~~a~~dai~MHcLP 301 (365)
T 4amu_A 257 TDVWVSLGEPFELFDKRIGELKNFQVDMNMIKAAKNDVIFLHCLP 301 (365)
T ss_dssp ECCSCCTTCCHHHHHHHHHHHTTCCBCHHHHHHSCTTCEEEECSC
T ss_pred ecccccCCchhhhHHHHHHHhcccccCHHHHHhcCCCcEEECCCC
Confidence 742 11111 023478888888888888888753
No 300
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=97.59 E-value=0.0002 Score=62.05 Aligned_cols=90 Identities=18% Similarity=0.123 Sum_probs=68.2
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCC-eEEEEcCCCCChhHHHhhCCeec-------CCHHhhcc-----cCCEEEEcCC
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFE-------EDLDTMLP-----KCDIVVVNTP 101 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~-------~~l~e~l~-----~aDvVv~~~p 101 (223)
.|.+|.|+|.|.+|...++.++.+|+ +|++.++++...+.++++|...+ .++.+.+. ..|+|+-++.
T Consensus 190 ~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~~g 269 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIG 269 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEECCC
Confidence 58899999999999999999999999 79999987766677777886422 12333332 4899998886
Q ss_pred CChhhhhcccHHHHhcCCCC-cEEEEcCC
Q 027408 102 LTEKTRGMFDKDRIAKMKKG-VLIVNNAR 129 (223)
Q Consensus 102 ~~~~t~~~i~~~~~~~mk~g-a~ivn~sr 129 (223)
..+ .....++.++++ ..++.++-
T Consensus 270 ~~~-----~~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 270 NVK-----VMRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp CHH-----HHHHHHHTBCTTTCEEEECSC
T ss_pred cHH-----HHHHHHHhhccCCcEEEEEec
Confidence 211 126778889998 88888764
No 301
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=97.58 E-value=0.00017 Score=61.85 Aligned_cols=64 Identities=25% Similarity=0.226 Sum_probs=47.6
Q ss_pred CEEEEEcccHHHHHHHHHHccCCCeEE-EEcCCC-CChhHH----HhhCC--eecCCHHhhccc--CCEEEEcCC
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNCNLL-YHDRVK-MDPQLE----KETGA--KFEEDLDTMLPK--CDIVVVNTP 101 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~~V~-~~d~~~-~~~~~~----~~~g~--~~~~~l~e~l~~--aDvVv~~~p 101 (223)
.+|||||+|.+|+..++.+ .-+.+|. ++|+++ ...+.+ +++++ ..++++++++++ .|+|++++|
T Consensus 3 ~rvgiiG~G~~~~~~~~~l-~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~I~tp 76 (337)
T 3ip3_A 3 LKICVIGSSGHFRYALEGL-DEECSITGIAPGVPEEDLSKLEKAISEMNIKPKKYNNWWEMLEKEKPDILVINTV 76 (337)
T ss_dssp EEEEEECSSSCHHHHHTTC-CTTEEEEEEECSSTTCCCHHHHHHHHTTTCCCEECSSHHHHHHHHCCSEEEECSS
T ss_pred eEEEEEccchhHHHHHHhc-CCCcEEEEEecCCchhhHHHHHHHHHHcCCCCcccCCHHHHhcCCCCCEEEEeCC
Confidence 4899999999999887777 5577755 688765 233222 22354 567899999964 899999999
No 302
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=97.58 E-value=0.00019 Score=62.43 Aligned_cols=90 Identities=14% Similarity=0.100 Sum_probs=68.3
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCC-eEEEEcCCCCChhHHHhhCCeec-------CCHHhhcc-----cCCEEEEcCC
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFE-------EDLDTMLP-----KCDIVVVNTP 101 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~-------~~l~e~l~-----~aDvVv~~~p 101 (223)
.|.+|.|+|.|.+|...++.++..|+ +|++.++++...+.++++|+..+ .++.+.+. ..|+|+-++.
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g 272 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIG 272 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEECCC
Confidence 58899999999999999999999999 79999988877778888886432 22333222 4899998887
Q ss_pred CChhhhhcccHHHHhcCCCC-cEEEEcCC
Q 027408 102 LTEKTRGMFDKDRIAKMKKG-VLIVNNAR 129 (223)
Q Consensus 102 ~~~~t~~~i~~~~~~~mk~g-a~ivn~sr 129 (223)
.. . .-...++.++++ ..++.++-
T Consensus 273 ~~-~----~~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 273 NV-S----VMRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp CH-H----HHHHHHHTBCTTTCEEEECSC
T ss_pred CH-H----HHHHHHHHhhccCCEEEEEcc
Confidence 21 1 126778889986 88887764
No 303
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=97.57 E-value=0.00017 Score=62.04 Aligned_cols=95 Identities=17% Similarity=0.128 Sum_probs=60.0
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCC--eEEEEcCCCCChh-----HHHh-----hCCeecCCHHhhcccCCEEEEcCCC
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQ-----LEKE-----TGAKFEEDLDTMLPKCDIVVVNTPL 102 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~-----~~~~-----~g~~~~~~l~e~l~~aDvVv~~~p~ 102 (223)
..++|+|||.|.||.++|..+...|. +|..+|++....+ +... .++...++..+.+++||+|+++.+.
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~~aDvVvi~ag~ 83 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCKDADIVCICAGA 83 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGTTCSEEEECCSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHHHhCCCCEEEEeccc
Confidence 35799999999999999999987776 8999998642111 1111 1222222334678899999998753
Q ss_pred --Chh-hh-hcc--c----H---HHHhcCCCCcEEEEcCC
Q 027408 103 --TEK-TR-GMF--D----K---DRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 103 --~~~-t~-~~i--~----~---~~~~~mk~ga~ivn~sr 129 (223)
.|. ++ .++ | + +.+....|++++++++.
T Consensus 84 p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtN 123 (326)
T 3pqe_A 84 NQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATN 123 (326)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCC
Confidence 111 11 111 1 1 22333467899999984
No 304
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=97.57 E-value=0.0002 Score=61.71 Aligned_cols=96 Identities=13% Similarity=0.158 Sum_probs=72.7
Q ss_pred CCCCCEEEEEccc--HHHHHHHHHHccCCCeEEEEcCCC-C-ChhH-------HHhhC--CeecCCHHhhcccCCEEEEc
Q 027408 33 DLEGKTVGTVGCG--RIGKLLLQRLKPFNCNLLYHDRVK-M-DPQL-------EKETG--AKFEEDLDTMLPKCDIVVVN 99 (223)
Q Consensus 33 ~l~g~~igIiG~G--~iG~~iA~~l~~~G~~V~~~d~~~-~-~~~~-------~~~~g--~~~~~~l~e~l~~aDvVv~~ 99 (223)
.|.|.+|++||=| +++++++..+..+|++|.+..|.. . ..+. ++..| +....+++++++++|+|...
T Consensus 152 ~l~gl~ia~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd 231 (333)
T 1duv_G 152 AFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTD 231 (333)
T ss_dssp CGGGCEEEEESCTTSHHHHHHHHHHHHHCCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEEESCHHHHHTTCSEEEEC
T ss_pred CCCCcEEEEECCCccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEECHHHHhCCCCEEEeC
Confidence 5889999999985 999999999999999999999864 2 2222 11445 44568999999999999884
Q ss_pred CCC-----Ch---h-----hhhcccHHHHhcC-CCCcEEEEcC
Q 027408 100 TPL-----TE---K-----TRGMFDKDRIAKM-KKGVLIVNNA 128 (223)
Q Consensus 100 ~p~-----~~---~-----t~~~i~~~~~~~m-k~ga~ivn~s 128 (223)
.=. .+ + ...-++.+.++.+ |++++|..+.
T Consensus 232 ~w~smg~~~~~~~er~~~~~~y~v~~~ll~~a~~~~ai~mHcL 274 (333)
T 1duv_G 232 VWVSMGEAKEKWAERIALLREYQVNSKMMQLTGNPEVKFLHCL 274 (333)
T ss_dssp CSSCTTSCTTHHHHHHHHHGGGCBCHHHHHTTCCTTCEEEECS
T ss_pred CccccCccccchHHHHHHhhccccCHHHHHhccCCCcEEECCC
Confidence 320 11 1 1245788999999 9999998875
No 305
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=97.56 E-value=0.00051 Score=59.30 Aligned_cols=95 Identities=12% Similarity=0.072 Sum_probs=68.0
Q ss_pred CCCCCEEEEEc-ccHHHHHHHHHHccCCCeEEEEcCCCC-Ch-hH-------HHhhC--CeecCCHHhhcccCCEEEEcC
Q 027408 33 DLEGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKM-DP-QL-------EKETG--AKFEEDLDTMLPKCDIVVVNT 100 (223)
Q Consensus 33 ~l~g~~igIiG-~G~iG~~iA~~l~~~G~~V~~~d~~~~-~~-~~-------~~~~g--~~~~~~l~e~l~~aDvVv~~~ 100 (223)
.+.|.+|++|| .+++.++++..+..+|++|.+..|... .. +. ++..| +....+++ +++++|+|..-+
T Consensus 172 ~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~-av~~aDvvytd~ 250 (339)
T 4a8t_A 172 KLEDCKVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS-SVEGADFLYTDV 250 (339)
T ss_dssp CGGGCEEEEESSCCHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHCCEEEEECCGG-GGTTCSEEEECC
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEECChh-HHcCCCEEEecC
Confidence 58999999999 489999999999999999999998642 22 21 12345 34567899 999999998633
Q ss_pred --C--C-C---hh----h--hhcccHHHHhcCCCCcEEEEcC
Q 027408 101 --P--L-T---EK----T--RGMFDKDRIAKMKKGVLIVNNA 128 (223)
Q Consensus 101 --p--~-~---~~----t--~~~i~~~~~~~mk~ga~ivn~s 128 (223)
+ . . ++ . ..-++.+.++.+|++++|..+.
T Consensus 251 w~smg~~~~~~~er~~~~~~~y~vt~ell~~ak~dai~mHcL 292 (339)
T 4a8t_A 251 WYGLYEAELSEEERMKVFYPKYQVNQEMMDRAGANCKFMHCL 292 (339)
T ss_dssp SSCCTTSCCCHHHHHHHHTTTTCBCHHHHHHHCTTCEEEECS
T ss_pred cccCCchhhhhHHHHHHhccccccCHHHHHhcCCCcEEECCC
Confidence 1 0 0 11 1 1446777777778888777664
No 306
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=97.56 E-value=0.00018 Score=62.04 Aligned_cols=67 Identities=28% Similarity=0.327 Sum_probs=47.3
Q ss_pred CEEEEEcccHHHHHHHHHHccC-CCeEE-EEcCCCCCh-hHHHhhCC------------------eecCCHHhhcccCCE
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPF-NCNLL-YHDRVKMDP-QLEKETGA------------------KFEEDLDTMLPKCDI 95 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~-G~~V~-~~d~~~~~~-~~~~~~g~------------------~~~~~l~e~l~~aDv 95 (223)
.+|||+|+|.||+.+++.+... ++++. +.|+++... ..++..|+ ....+.++++.++|+
T Consensus 3 irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~~~vDv 82 (334)
T 2czc_A 3 VKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVDI 82 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCSE
T ss_pred cEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhccCCCE
Confidence 3899999999999999999765 56754 566653222 22233332 233578888889999
Q ss_pred EEEcCCCC
Q 027408 96 VVVNTPLT 103 (223)
Q Consensus 96 Vv~~~p~~ 103 (223)
|+.|+|..
T Consensus 83 V~~aTp~~ 90 (334)
T 2czc_A 83 IVDATPGG 90 (334)
T ss_dssp EEECCSTT
T ss_pred EEECCCcc
Confidence 99999944
No 307
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=97.54 E-value=9.1e-05 Score=63.41 Aligned_cols=116 Identities=16% Similarity=0.134 Sum_probs=67.2
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCC--eEEEEcCCCCChhH-HHh---------hCCeecCCHHhhcccCCEEEEcCCC
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQL-EKE---------TGAKFEEDLDTMLPKCDIVVVNTPL 102 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~~-~~~---------~g~~~~~~l~e~l~~aDvVv~~~p~ 102 (223)
..++|+|||.|.+|.+++..+...|. +|..+|.++...+. +.. ..+....+..+.+++||+|+++.+.
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~~aDvVvi~ag~ 84 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVVICAGA 84 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhCCCCEEEECCCC
Confidence 45799999999999999999876664 79999986421111 111 1112112446778999999999864
Q ss_pred Chhh---h--------hccc--HHHHhcCCCCcEEEEcCCCCccCHHHHHHH--HHhCCccEE
Q 027408 103 TEKT---R--------GMFD--KDRIAKMKKGVLIVNNARGAIMDTQAVVDA--CSSGHIAGY 150 (223)
Q Consensus 103 ~~~t---~--------~~i~--~~~~~~mk~ga~ivn~srg~~vd~~al~~~--L~~g~i~~a 150 (223)
.... + .++. .+.+....|++++++++..-=+....+.+. +...++.|.
T Consensus 85 ~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~k~~~~p~~rviG~ 147 (317)
T 3d0o_A 85 AQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATNPVDILAYATWKFSGLPKERVIGS 147 (317)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCcHHHHHHHHHHHhCCCHHHEEec
Confidence 2211 0 1110 122233378999999763322223333333 233356555
No 308
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=97.54 E-value=0.00018 Score=60.80 Aligned_cols=90 Identities=13% Similarity=0.162 Sum_probs=61.1
Q ss_pred CEEEEEc-ccHHHHHHHHHHcc-CCCeEE-EEcCCCCCh---hHH-----HhhCCeecCCHHhhcccCCEEEEcCCCChh
Q 027408 37 KTVGTVG-CGRIGKLLLQRLKP-FNCNLL-YHDRVKMDP---QLE-----KETGAKFEEDLDTMLPKCDIVVVNTPLTEK 105 (223)
Q Consensus 37 ~~igIiG-~G~iG~~iA~~l~~-~G~~V~-~~d~~~~~~---~~~-----~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~ 105 (223)
.+|+|+| +|+||+.+++.+.. -++++. ++|++.... +.. ...|+...+++++++.++|+|+-.++ |+
T Consensus 22 irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll~~aDVvIDFT~--p~ 99 (288)
T 3ijp_A 22 MRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAFSNTEGILDFSQ--PQ 99 (288)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHTTSCSEEEECSC--HH
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccCcCCceeeCCHHHHhcCCCEEEEcCC--HH
Confidence 5899999 99999999999864 578854 668754210 111 12456667899999999999998776 33
Q ss_pred hhhcccHHHHhcCCCCcEEEEcCCCC
Q 027408 106 TRGMFDKDRIAKMKKGVLIVNNARGA 131 (223)
Q Consensus 106 t~~~i~~~~~~~mk~ga~ivn~srg~ 131 (223)
. ........++.|.-+|..+.|-
T Consensus 100 a---~~~~~~~~l~~Gv~vViGTTG~ 122 (288)
T 3ijp_A 100 A---SVLYANYAAQKSLIHIIGTTGF 122 (288)
T ss_dssp H---HHHHHHHHHHHTCEEEECCCCC
T ss_pred H---HHHHHHHHHHcCCCEEEECCCC
Confidence 2 1223333455677777777773
No 309
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=97.54 E-value=0.00018 Score=62.21 Aligned_cols=66 Identities=21% Similarity=0.303 Sum_probs=43.5
Q ss_pred EEEEEcccHHHHHHHHHHccC-CCeEE-EEcCCCCCh-hHHHhhCCeec-----------------CCHHhhcccCCEEE
Q 027408 38 TVGTVGCGRIGKLLLQRLKPF-NCNLL-YHDRVKMDP-QLEKETGAKFE-----------------EDLDTMLPKCDIVV 97 (223)
Q Consensus 38 ~igIiG~G~iG~~iA~~l~~~-G~~V~-~~d~~~~~~-~~~~~~g~~~~-----------------~~l~e~l~~aDvVv 97 (223)
+|||+|+|.||+.+++.+... ++++. +.|++.... ..+...++..+ .++++++.++|+|+
T Consensus 3 kVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~~vDvV~ 82 (340)
T 1b7g_O 3 NVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIVV 82 (340)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEEE
T ss_pred EEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhcccccccccCHhHhhcCCCEEE
Confidence 799999999999999999765 56765 556543211 22222233222 24445566899999
Q ss_pred EcCCCC
Q 027408 98 VNTPLT 103 (223)
Q Consensus 98 ~~~p~~ 103 (223)
.|+|..
T Consensus 83 ~aTp~~ 88 (340)
T 1b7g_O 83 DTTPNG 88 (340)
T ss_dssp ECCSTT
T ss_pred ECCCCc
Confidence 999943
No 310
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=97.52 E-value=0.00077 Score=58.48 Aligned_cols=96 Identities=11% Similarity=0.107 Sum_probs=67.3
Q ss_pred CCCCCEEEEEcc-cHHHHHHHHHHccCCCeEEEEcCCCC--ChhHHH---hh--------CCeecCCHHhhcccCCEEEE
Q 027408 33 DLEGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKM--DPQLEK---ET--------GAKFEEDLDTMLPKCDIVVV 98 (223)
Q Consensus 33 ~l~g~~igIiG~-G~iG~~iA~~l~~~G~~V~~~d~~~~--~~~~~~---~~--------g~~~~~~l~e~l~~aDvVv~ 98 (223)
.|.|.+|++||= -++.++++..+..+|++|.+..|... +.+..+ +. ++....+++|+++++|+|+.
T Consensus 185 ~l~glkva~vGD~~nva~Sl~~~l~~lG~~v~~~~P~~~~~~~~i~~~~~~~a~~~~~g~~~~~~~d~~eav~~aDVvyt 264 (353)
T 3sds_A 185 GLEGLKIAWVGDANNVLFDLAIAATKMGVNVAVATPRGYEIPSHIVELIQKAREGVQSPGNLTQTTVPEVAVKDADVIVT 264 (353)
T ss_dssp SCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHTTCSSCCCEEEESCHHHHTTTCSEEEE
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHhhhhccCCCeEEEECCHHHHhcCCCEEEe
Confidence 479999999995 57899999999999999999998652 222211 11 34556799999999999987
Q ss_pred cC--CCChh----------hhhcccHHHHhc--CCCCcEEEEcC
Q 027408 99 NT--PLTEK----------TRGMFDKDRIAK--MKKGVLIVNNA 128 (223)
Q Consensus 99 ~~--p~~~~----------t~~~i~~~~~~~--mk~ga~ivn~s 128 (223)
-+ +...+ ....++.+.++. +|++++|..+.
T Consensus 265 d~w~smg~E~~~~~r~~~~~~y~vt~ell~~~~ak~~ai~MHcL 308 (353)
T 3sds_A 265 DTWISMGQETEKIKRLEAFKDFKVTSELAKRGGAKENWKFMHCL 308 (353)
T ss_dssp CCC--------CHHHHHHTTTCCBCHHHHHHHTCCTTCEEEECS
T ss_pred CCccCCchhhHHHHHHHHhhCceecHHHHhhcccCCCcEEECCC
Confidence 43 21111 113467777777 77777777663
No 311
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=97.52 E-value=0.00045 Score=58.98 Aligned_cols=96 Identities=19% Similarity=0.308 Sum_probs=67.9
Q ss_pred CCCCCEEEEEcc---cHHHHHHHHHHccC-CCeEEEEcCCCC-Chh-H---HHhhCC--eecCCHHhhcccCCEEEEcCC
Q 027408 33 DLEGKTVGTVGC---GRIGKLLLQRLKPF-NCNLLYHDRVKM-DPQ-L---EKETGA--KFEEDLDTMLPKCDIVVVNTP 101 (223)
Q Consensus 33 ~l~g~~igIiG~---G~iG~~iA~~l~~~-G~~V~~~d~~~~-~~~-~---~~~~g~--~~~~~l~e~l~~aDvVv~~~p 101 (223)
.+.|.+|+++|= |++.++++..+..+ |++|.+..|... ..+ . +++.|. ....+++++++++|+|....=
T Consensus 151 ~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~ 230 (310)
T 3csu_A 151 RLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRV 230 (310)
T ss_dssp CSSSCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEECSCGGGTTTTCSEEEECC-
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECCc
Confidence 589999999997 59999999999999 999999998642 222 2 223353 356799999999999987643
Q ss_pred CCh-----hh-----hhcccHHHHhcCCCCcEEEEcC
Q 027408 102 LTE-----KT-----RGMFDKDRIAKMKKGVLIVNNA 128 (223)
Q Consensus 102 ~~~-----~t-----~~~i~~~~~~~mk~ga~ivn~s 128 (223)
-.+ +. ..-++.+.++.+|++++|..+.
T Consensus 231 q~er~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~l 267 (310)
T 3csu_A 231 QKERLDPSEYANVKAQFVLRASDLHNAKANMKVLHPL 267 (310)
T ss_dssp ----------------CCBCGGGGTTCCTTCEEECCS
T ss_pred cccccCHHHHHHHhhccCCCHHHHhhcCCCCEEECCC
Confidence 111 10 2345677777777777777653
No 312
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=97.52 E-value=0.00018 Score=65.08 Aligned_cols=115 Identities=16% Similarity=0.169 Sum_probs=70.8
Q ss_pred CCEEEEEcccHH--HHHHHHHHc---cC-CCeEEEEcCCCCChhHH----H----hh----CCeecCCHHhhcccCCEEE
Q 027408 36 GKTVGTVGCGRI--GKLLLQRLK---PF-NCNLLYHDRVKMDPQLE----K----ET----GAKFEEDLDTMLPKCDIVV 97 (223)
Q Consensus 36 g~~igIiG~G~i--G~~iA~~l~---~~-G~~V~~~d~~~~~~~~~----~----~~----g~~~~~~l~e~l~~aDvVv 97 (223)
.++|+|||.|.+ |.++|..+. ++ |.+|..||+++...+.. . .. .+...+++++.+++||+|+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~ttD~~eal~dAD~VI 82 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFVI 82 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCcEEEEECCHHHHhCCCCEEE
Confidence 468999999997 566666664 23 78999999975321111 1 11 1233468888899999999
Q ss_pred EcCCCCh---------------------hhh-------hc--------ccH---HHHhcCCCCcEEEEcCCCCccCHHHH
Q 027408 98 VNTPLTE---------------------KTR-------GM--------FDK---DRIAKMKKGVLIVNNARGAIMDTQAV 138 (223)
Q Consensus 98 ~~~p~~~---------------------~t~-------~~--------i~~---~~~~~mk~ga~ivn~srg~~vd~~al 138 (223)
+++|... +|. ++ +-. +.+....|++++||++..--+-..++
T Consensus 83 iaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~t~~~ 162 (480)
T 1obb_A 83 NTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAANPIFEGTTLV 162 (480)
T ss_dssp ECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECSSCHHHHHHHH
T ss_pred ECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHH
Confidence 9997310 110 00 011 22333458999999987665555555
Q ss_pred HHHHHhCCccEEE
Q 027408 139 VDACSSGHIAGYS 151 (223)
Q Consensus 139 ~~~L~~g~i~~a~ 151 (223)
.+ +...++.|.+
T Consensus 163 ~k-~p~~rviG~c 174 (480)
T 1obb_A 163 TR-TVPIKAVGFC 174 (480)
T ss_dssp HH-HSCSEEEEEC
T ss_pred HH-CCCCcEEecC
Confidence 44 5555666553
No 313
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=97.52 E-value=0.0003 Score=60.56 Aligned_cols=91 Identities=16% Similarity=0.218 Sum_probs=67.2
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeec---C---C-HHhh---c-----ccCCEEEEc
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE---E---D-LDTM---L-----PKCDIVVVN 99 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~---~---~-l~e~---l-----~~aDvVv~~ 99 (223)
.|++|.|+|.|.+|...++.++.+|++|++.++++...+.++++|...+ . + .+++ . ...|+|+.+
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~vid~ 247 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDC 247 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCCCEEEEC
Confidence 5899999999999999999999999999999987655566677776321 1 1 1222 2 258999988
Q ss_pred CCCChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 027408 100 TPLTEKTRGMFDKDRIAKMKKGVLIVNNARG 130 (223)
Q Consensus 100 ~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg 130 (223)
+...+ .....++.++++..++.++.+
T Consensus 248 ~g~~~-----~~~~~~~~l~~~G~iv~~G~~ 273 (352)
T 1e3j_A 248 SGNEK-----CITIGINITRTGGTLMLVGMG 273 (352)
T ss_dssp SCCHH-----HHHHHHHHSCTTCEEEECSCC
T ss_pred CCCHH-----HHHHHHHHHhcCCEEEEEecC
Confidence 87321 125677889999999988753
No 314
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=97.51 E-value=8.8e-05 Score=63.83 Aligned_cols=90 Identities=17% Similarity=0.205 Sum_probs=65.7
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCC-eEEEEcCCCCChhHHHhhCCeec-----CCHHhhc------ccCCEEEEcCCC
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFE-----EDLDTML------PKCDIVVVNTPL 102 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~-----~~l~e~l------~~aDvVv~~~p~ 102 (223)
.|++|.|+|.|.+|...++.++.+|+ +|++.++++...+.++++|...+ .++.+.+ ...|+|+.++..
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D~vid~~g~ 246 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVDVFLEFSGA 246 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEEEEEECSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCCEEEECCCC
Confidence 78999999999999999999999999 89999987655556667775421 1232222 147999888872
Q ss_pred ChhhhhcccHHHHhcCCCCcEEEEcCC
Q 027408 103 TEKTRGMFDKDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 103 ~~~t~~~i~~~~~~~mk~ga~ivn~sr 129 (223)
.+ .....++.++++..++.++.
T Consensus 247 ~~-----~~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 247 PK-----ALEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp HH-----HHHHHHHHEEEEEEEEECCC
T ss_pred HH-----HHHHHHHHHhcCCEEEEEcc
Confidence 11 12566777888888888764
No 315
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=97.51 E-value=0.00034 Score=59.17 Aligned_cols=68 Identities=16% Similarity=0.109 Sum_probs=56.1
Q ss_pred CCCCCEEEEEcc---cHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCC
Q 027408 33 DLEGKTVGTVGC---GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTP 101 (223)
Q Consensus 33 ~l~g~~igIiG~---G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p 101 (223)
.+.|.+|+++|= +++.++++..+..+|++|.+..|....+....+.|+....+++++++++|+|.. +-
T Consensus 143 ~l~gl~va~vGDl~~~rva~Sl~~~~~~~g~~v~~~~P~~~~p~~~~~~g~~~~~d~~eav~~aDvvy~-~~ 213 (291)
T 3d6n_B 143 EVKDLRVLYVGDIKHSRVFRSGAPLLNMFGAKIGVCGPKTLIPRDVEVFKVDVFDDVDKGIDWADVVIW-LR 213 (291)
T ss_dssp CCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGGSCTTGGGGCEEEESSHHHHHHHCSEEEE-CC
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEECCchhCCchHHHCCCEEEcCHHHHhCCCCEEEE-eC
Confidence 589999999996 899999999999999999999986422221334577777899999999999988 54
No 316
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=97.50 E-value=0.00068 Score=60.48 Aligned_cols=109 Identities=16% Similarity=0.245 Sum_probs=71.6
Q ss_pred ccCCCCCEEEEEcccHHHHHHHHHHccCCCeEE-EEcCC-------CCChhHH----HhhC-------CeecCCHHhhcc
Q 027408 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLL-YHDRV-------KMDPQLE----KETG-------AKFEEDLDTMLP 91 (223)
Q Consensus 31 ~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~-~~d~~-------~~~~~~~----~~~g-------~~~~~~l~e~l~ 91 (223)
+.++.|++|+|.|+|++|+..|+.|...|.+|+ +.|.+ ....+.. +..+ .... +.++++.
T Consensus 230 g~~l~g~~vaVqGfGnVG~~~a~~L~e~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~i~~y~~a~~i-~~~ei~~ 308 (440)
T 3aog_A 230 GLQVEGARVAIQGFGNVGNAAARAFHDHGARVVAVQDHTGTVYNEAGIDPYDLLRHVQEFGGVRGYPKAEPL-PAADFWG 308 (440)
T ss_dssp TCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHTSSSTTCTTSEEC-CHHHHTT
T ss_pred CCCccCCEEEEeccCHHHHHHHHHHHHCCCEEEEEEcCCcEEECCCCCCHHHHHHHHHhcCCcccCCCceEc-Cchhhhc
Confidence 357899999999999999999999999999987 44542 1122211 1111 2233 4566663
Q ss_pred -cCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCcc
Q 027408 92 -KCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (223)
Q Consensus 92 -~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~ 148 (223)
+||+++-|.. .+.++.+....++ -.+|+-.+.+.+ ..++ .+.|.+..+.
T Consensus 309 ~~~DIlvPcA~-----~n~i~~~na~~l~-ak~VvEgAN~p~-t~eA-~~iL~~~GI~ 358 (440)
T 3aog_A 309 LPVEFLVPAAL-----EKQITEQNAWRIR-ARIVAEGANGPT-TPAA-DDILLEKGVL 358 (440)
T ss_dssp CCCSEEEECSS-----SSCBCTTTGGGCC-CSEEECCSSSCB-CHHH-HHHHHHHTCE
T ss_pred CCCcEEEecCC-----cCccchhhHHHcC-CcEEEecCcccc-CHHH-HHHHHHCCCE
Confidence 7999999987 4456666666673 456666666664 4444 3556665555
No 317
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=97.49 E-value=0.00011 Score=62.00 Aligned_cols=102 Identities=18% Similarity=0.214 Sum_probs=64.8
Q ss_pred CEEEEEcccHHHHHHHHHHcc----CCCeEE-EEcCCCCChhHHHhhCCeecCCHHhhcc--cCCEEEEcCCCChhhhhc
Q 027408 37 KTVGTVGCGRIGKLLLQRLKP----FNCNLL-YHDRVKMDPQLEKETGAKFEEDLDTMLP--KCDIVVVNTPLTEKTRGM 109 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~----~G~~V~-~~d~~~~~~~~~~~~g~~~~~~l~e~l~--~aDvVv~~~p~~~~t~~~ 109 (223)
.+|||||+|.||+..++.+.. -+.++. ++|++.. ++..++. ..+++++++ +.|+|++++|.. .+.
T Consensus 8 ~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~----a~~~g~~-~~~~~ell~~~~vD~V~i~tp~~--~H~- 79 (294)
T 1lc0_A 8 FGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRREL----GSLDEVR-QISLEDALRSQEIDVAYICSESS--SHE- 79 (294)
T ss_dssp EEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSCC----CEETTEE-BCCHHHHHHCSSEEEEEECSCGG--GHH-
T ss_pred ceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchHH----HHHcCCC-CCCHHHHhcCCCCCEEEEeCCcH--hHH-
Confidence 489999999999999998865 356654 6776532 2334555 369999986 689999999932 222
Q ss_pred ccHHHHhcCCCCcE-EEEcC-CCCccCHHHHHHHHHhCCcc
Q 027408 110 FDKDRIAKMKKGVL-IVNNA-RGAIMDTQAVVDACSSGHIA 148 (223)
Q Consensus 110 i~~~~~~~mk~ga~-ivn~s-rg~~vd~~al~~~L~~g~i~ 148 (223)
+.....++.|.. ++.-- .-.+-+.++|.++.++..+.
T Consensus 80 --~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~ 118 (294)
T 1lc0_A 80 --DYIRQFLQAGKHVLVEYPMTLSFAAAQELWELAAQKGRV 118 (294)
T ss_dssp --HHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHTTCC
T ss_pred --HHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCE
Confidence 334445556664 44421 11223345677766665544
No 318
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=97.49 E-value=0.0002 Score=64.01 Aligned_cols=108 Identities=16% Similarity=0.261 Sum_probs=67.8
Q ss_pred CEEEEEcccHHHHHHHHHHccC-CCeE-EEEcCCCCChhH-HHhh-C----------------------CeecCCHHhhc
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPF-NCNL-LYHDRVKMDPQL-EKET-G----------------------AKFEEDLDTML 90 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~-G~~V-~~~d~~~~~~~~-~~~~-g----------------------~~~~~~l~e~l 90 (223)
.+|||||+|.||+.+++.+... ++++ .++|++....+. +++. | ...++++++++
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~eeLL 103 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDNDLIL 103 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCHHHHH
T ss_pred eEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECCHHHHh
Confidence 4799999999999999988754 6774 577886532222 2222 3 33567999999
Q ss_pred c--cCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCC-ccCHHHHHHHHHhCCcc
Q 027408 91 P--KCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGA-IMDTQAVVDACSSGHIA 148 (223)
Q Consensus 91 ~--~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~-~vd~~al~~~L~~g~i~ 148 (223)
. +.|+|++++|.. .. +. +-....++.|..++....+- ...-..|.++-++..+.
T Consensus 104 ~d~dIDaVviaTp~p-~~-H~--e~a~~AL~AGKHVv~~nk~l~~~eg~eL~~~A~e~Gvv 160 (446)
T 3upl_A 104 SNPLIDVIIDATGIP-EV-GA--ETGIAAIRNGKHLVMMNVEADVTIGPYLKAQADKQGVI 160 (446)
T ss_dssp TCTTCCEEEECSCCH-HH-HH--HHHHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCC
T ss_pred cCCCCCEEEEcCCCh-HH-HH--HHHHHHHHcCCcEEecCcccCHHHHHHHHHHHHHhCCe
Confidence 6 589999999832 21 11 34455667777777543211 11224566655555544
No 319
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=97.49 E-value=0.00012 Score=62.79 Aligned_cols=91 Identities=22% Similarity=0.230 Sum_probs=67.2
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeec-----CCHHhhc----ccCCEEEEcCCCChh
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLDTML----PKCDIVVVNTPLTEK 105 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~e~l----~~aDvVv~~~p~~~~ 105 (223)
.|++|.|+|.|.+|..+++.++..|++|++.++++...+.++++|.... .++.+.+ ...|+|+.++...+
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vid~~g~~~- 242 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKP- 242 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSCCHH-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEEECCCCHH-
Confidence 5889999999999999999999999999999987655556666775422 1222222 35899998886211
Q ss_pred hhhcccHHHHhcCCCCcEEEEcCCC
Q 027408 106 TRGMFDKDRIAKMKKGVLIVNNARG 130 (223)
Q Consensus 106 t~~~i~~~~~~~mk~ga~ivn~srg 130 (223)
.....++.++++..++.++..
T Consensus 243 ----~~~~~~~~l~~~G~~v~~g~~ 263 (339)
T 1rjw_A 243 ----AFQSAYNSIRRGGACVLVGLP 263 (339)
T ss_dssp ----HHHHHHHHEEEEEEEEECCCC
T ss_pred ----HHHHHHHHhhcCCEEEEeccc
Confidence 125677888888888888754
No 320
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=97.49 E-value=0.0012 Score=58.50 Aligned_cols=109 Identities=20% Similarity=0.274 Sum_probs=72.7
Q ss_pred ccCCCCCEEEEEcccHHHHHHHHHHcc-CCCeEE-EEcCC-------CCChhHHH----hhC-------CeecCCHHhhc
Q 027408 31 AYDLEGKTVGTVGCGRIGKLLLQRLKP-FNCNLL-YHDRV-------KMDPQLEK----ETG-------AKFEEDLDTML 90 (223)
Q Consensus 31 ~~~l~g~~igIiG~G~iG~~iA~~l~~-~G~~V~-~~d~~-------~~~~~~~~----~~g-------~~~~~~l~e~l 90 (223)
+.++.|++|.|.|+|++|+..|+.|.. .|.+|+ +.|.+ ....+... ..+ .... +.++++
T Consensus 204 g~~l~g~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~l~~y~~a~~~-~~~eil 282 (415)
T 2tmg_A 204 GIDPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGERI-TNEELL 282 (415)
T ss_dssp TCCTTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEECTTCCCHHHHHHHHHHSSCSTTCSSSEEE-CHHHHT
T ss_pred CCCcCCCEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeCCCeEECCCCCCHHHHHHHHHhhCCcccCCCceEc-Cchhhh
Confidence 457899999999999999999999998 999987 44442 11222111 111 1223 456666
Q ss_pred -ccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCcc
Q 027408 91 -PKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (223)
Q Consensus 91 -~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~ 148 (223)
.+||+++-|.. .+.++.+....++ -.+|+-.+.+.+ ..++ .+.|.+..+.
T Consensus 283 ~~~~DIliP~A~-----~n~i~~~~a~~l~-ak~V~EgAN~p~-t~~a-~~~l~~~Gi~ 333 (415)
T 2tmg_A 283 ELDVDILVPAAL-----EGAIHAGNAERIK-AKAVVEGANGPT-TPEA-DEILSRRGIL 333 (415)
T ss_dssp TCSCSEEEECSS-----TTSBCHHHHTTCC-CSEEECCSSSCB-CHHH-HHHHHHTTCE
T ss_pred cCCCcEEEecCC-----cCccCcccHHHcC-CeEEEeCCCccc-CHHH-HHHHHHCCCE
Confidence 47999999987 4567788888773 456666666664 5444 3556666665
No 321
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=97.48 E-value=7.7e-05 Score=64.31 Aligned_cols=94 Identities=16% Similarity=0.183 Sum_probs=60.0
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCC--eEEEEcCCCCChh-----HHHh--h----CCeecCCHHhhcccCCEEEEcCC
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQ-----LEKE--T----GAKFEEDLDTMLPKCDIVVVNTP 101 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~-----~~~~--~----g~~~~~~l~e~l~~aDvVv~~~p 101 (223)
..++|+|||.|.||..+|..+...|+ +|..+|.+....+ +... + .+....++++ +++||+|+++..
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-~~daDiVIitaG 98 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-SAGSKLVVITAG 98 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-CSSCSEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-hCCCCEEEEeCC
Confidence 57899999999999999999987776 8999998642111 1111 0 1122346665 899999999864
Q ss_pred CCh---hhh-hcc--c----H---HHHhcCCCCcEEEEcCC
Q 027408 102 LTE---KTR-GMF--D----K---DRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 102 ~~~---~t~-~~i--~----~---~~~~~mk~ga~ivn~sr 129 (223)
... .++ .++ | + +.+....|++++++++.
T Consensus 99 ~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtN 139 (330)
T 3ldh_A 99 ARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPE 139 (330)
T ss_dssp CCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred CCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCC
Confidence 211 011 111 1 1 12233378999999884
No 322
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=97.48 E-value=8.4e-05 Score=60.10 Aligned_cols=65 Identities=18% Similarity=0.218 Sum_probs=46.3
Q ss_pred CCEEEEEcccHHHHHHHHHH--ccCCCeE-EEEcCCCCChh-HHHhhCCeecCCHHhhcc-cCCEEEEcCC
Q 027408 36 GKTVGTVGCGRIGKLLLQRL--KPFNCNL-LYHDRVKMDPQ-LEKETGAKFEEDLDTMLP-KCDIVVVNTP 101 (223)
Q Consensus 36 g~~igIiG~G~iG~~iA~~l--~~~G~~V-~~~d~~~~~~~-~~~~~g~~~~~~l~e~l~-~aDvVv~~~p 101 (223)
.++|+|||+|.+|+.+++.+ .. |+++ .++|.++.... ......+...++++++++ +.|+|++|+|
T Consensus 80 ~~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~ell~~~ID~ViIA~P 149 (211)
T 2dt5_A 80 KWGLCIVGMGRLGSALADYPGFGE-SFELRGFFDVDPEKVGRPVRGGVIEHVDLLPQRVPGRIEIALLTVP 149 (211)
T ss_dssp CEEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEESCTTTTTCEETTEEEEEGGGHHHHSTTTCCEEEECSC
T ss_pred CCEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeCCHHHHhhhhcCCeeecHHhHHHHHHcCCCEEEEeCC
Confidence 46899999999999999963 34 7874 47787653221 122223334678899886 5899999999
No 323
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=97.48 E-value=0.00084 Score=57.55 Aligned_cols=96 Identities=15% Similarity=0.130 Sum_probs=70.7
Q ss_pred CCCCCEEEEEcc-cHHHHHHHHHHccCCCeEEEEcCCCC--ChhHHH-------hhC--CeecCCHHhhcccCCEEEEcC
Q 027408 33 DLEGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKM--DPQLEK-------ETG--AKFEEDLDTMLPKCDIVVVNT 100 (223)
Q Consensus 33 ~l~g~~igIiG~-G~iG~~iA~~l~~~G~~V~~~d~~~~--~~~~~~-------~~g--~~~~~~l~e~l~~aDvVv~~~ 100 (223)
.+.|.+|++||= .++.++++..+..+|++|.+..|... +.+..+ +.| +....+++++++++|+|..-+
T Consensus 152 ~l~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~d~ 231 (321)
T 1oth_A 152 SLKGLTLSWIGDGNNILHSIMMSAAKFGMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLLTNDPLEAAHGGNVLITDT 231 (321)
T ss_dssp CCTTCEEEEESCSSHHHHHHHTTTGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECC
T ss_pred CcCCcEEEEECCchhhHHHHHHHHHHcCCeEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHHHhccCCEEEEec
Confidence 589999999996 56999999999999999999998653 222211 234 455689999999999999843
Q ss_pred ----CCChh--------hhhcccHHHHhcCCCCcEEEEcC
Q 027408 101 ----PLTEK--------TRGMFDKDRIAKMKKGVLIVNNA 128 (223)
Q Consensus 101 ----p~~~~--------t~~~i~~~~~~~mk~ga~ivn~s 128 (223)
....+ ...-++.+.++.+|++++|..+.
T Consensus 232 w~s~g~e~~~~~~~~~~~~y~v~~~~l~~a~~dai~mH~l 271 (321)
T 1oth_A 232 WISMGREEEKKKRLQAFQGYQVTMKTAKVAASDWTFLHCL 271 (321)
T ss_dssp SSCTTCGGGHHHHHHHTTTCCBCHHHHHTSCTTCEEEECS
T ss_pred cccccchhhhHHHHHhccCceECHHHHhhcCCCCEEECCC
Confidence 21111 11446888888888888887763
No 324
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=97.48 E-value=0.00054 Score=58.74 Aligned_cols=66 Identities=23% Similarity=0.260 Sum_probs=47.5
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCC-eEEEEcCCCCChh-----HHHh-----hCC--eecCCHHhhcccCCEEEEcCC
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQ-----LEKE-----TGA--KFEEDLDTMLPKCDIVVVNTP 101 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~-----~~~~-----~g~--~~~~~l~e~l~~aDvVv~~~p 101 (223)
..++|+|||.|.||.++|..+...|. +|..+|+++...+ +... ... ....+ .+.+++||+|+++.+
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d-~~a~~~aDvVIi~ag 82 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTND-YKDLENSDVVIVTAG 82 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESC-GGGGTTCSEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCC-HHHHCCCCEEEEcCC
Confidence 45799999999999999999987777 9999999764321 1110 112 22234 478899999999864
No 325
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=97.47 E-value=0.0002 Score=61.82 Aligned_cols=91 Identities=21% Similarity=0.192 Sum_probs=67.5
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCC-eEEEEcCCCCChhHHHhhCCeec-C-C---HHh----hc----ccCCEEEEcC
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFE-E-D---LDT----ML----PKCDIVVVNT 100 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~-~-~---l~e----~l----~~aDvVv~~~ 100 (223)
.|.+|.|+|.|.+|...++.++.+|. +|++.++++...+.++++|...+ + + .++ +. ...|+|+-++
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 250 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECT 250 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEEECC
Confidence 58899999999999999999999999 89999987655566777776421 1 1 122 11 2589999988
Q ss_pred CCChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 027408 101 PLTEKTRGMFDKDRIAKMKKGVLIVNNARG 130 (223)
Q Consensus 101 p~~~~t~~~i~~~~~~~mk~ga~ivn~srg 130 (223)
... . .....++.++++..++.++.+
T Consensus 251 g~~-~----~~~~~~~~l~~~G~iv~~G~~ 275 (356)
T 1pl8_A 251 GAE-A----SIQAGIYATRSGGTLVLVGLG 275 (356)
T ss_dssp CCH-H----HHHHHHHHSCTTCEEEECSCC
T ss_pred CCh-H----HHHHHHHHhcCCCEEEEEecC
Confidence 722 1 125677889999999988753
No 326
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=97.47 E-value=0.0001 Score=63.46 Aligned_cols=94 Identities=16% Similarity=0.099 Sum_probs=58.3
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCC--eEEEEcCCCCChhH-HHhh--------CCeecCCHHhhcccCCEEEEcCCCC
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQL-EKET--------GAKFEEDLDTMLPKCDIVVVNTPLT 103 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~~-~~~~--------g~~~~~~l~e~l~~aDvVv~~~p~~ 103 (223)
..+||+|||.|.+|.+++..+...+. ++..+|......+. +.++ .+....+..+.+++||+|+++.+..
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~ag~~ 87 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSAEYSDAKDADLVVITAGAP 87 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGGGCSEEEECCCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEEcCCCC
Confidence 34799999999999999999876665 79999986421111 1111 1112224467789999999998643
Q ss_pred hhh-----------hhcccHH---HHhcCCCCcEEEEcCC
Q 027408 104 EKT-----------RGMFDKD---RIAKMKKGVLIVNNAR 129 (223)
Q Consensus 104 ~~t-----------~~~i~~~---~~~~mk~ga~ivn~sr 129 (223)
... ..++ .+ .+....|++.+++++.
T Consensus 88 ~k~g~~R~dl~~~n~~i~-~~i~~~i~~~~p~a~iiv~tN 126 (326)
T 2zqz_A 88 QKPGETRLDLVNKNLKIL-KSIVDPIVDSGFNGIFLVAAN 126 (326)
T ss_dssp -----CHHHHHHHHHHHH-HHHHHHHHHHTCCSEEEECSS
T ss_pred CCCCCCHHHHHHHHHHHH-HHHHHHHHHHCCCeEEEEeCC
Confidence 211 0111 11 2222368899999844
No 327
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=97.47 E-value=0.00054 Score=59.51 Aligned_cols=97 Identities=18% Similarity=0.240 Sum_probs=72.7
Q ss_pred CCCCCEEEEEccc--HHHHHHHHHHccCCCeEEEEcCCC-C-ChhH-------HHhhC--CeecCCHHhhcccCCEEEEc
Q 027408 33 DLEGKTVGTVGCG--RIGKLLLQRLKPFNCNLLYHDRVK-M-DPQL-------EKETG--AKFEEDLDTMLPKCDIVVVN 99 (223)
Q Consensus 33 ~l~g~~igIiG~G--~iG~~iA~~l~~~G~~V~~~d~~~-~-~~~~-------~~~~g--~~~~~~l~e~l~~aDvVv~~ 99 (223)
.|.|.+|+++|=| +++++++..+..+|++|.+..|.. . ..+. +++.| +....+++++++++|+|...
T Consensus 173 ~l~gl~va~vGD~~~rva~Sl~~~~~~lG~~v~~~~P~~l~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd 252 (359)
T 2w37_A 173 KLQGLTLTFMGDGRNNVANSLLVTGAILGVNIHIVAPKALFPTEETQNIAKGFAEKSGAKLVITDDLDEGLKGSNVVYTD 252 (359)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHHTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEEC
T ss_pred CcCCeEEEEECCCccchHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhcCCCEEEEc
Confidence 5899999999985 999999999999999999999864 2 2222 11445 45578999999999999884
Q ss_pred CCC---C---hh-----hhhcccHHHHhcCC---CCcEEEEcCC
Q 027408 100 TPL---T---EK-----TRGMFDKDRIAKMK---KGVLIVNNAR 129 (223)
Q Consensus 100 ~p~---~---~~-----t~~~i~~~~~~~mk---~ga~ivn~sr 129 (223)
.=. . ++ ...-++.+.++.+| ++++|..+.-
T Consensus 253 ~w~smg~ee~~er~~~~~~y~v~~ell~~ak~~~~dai~MHcLP 296 (359)
T 2w37_A 253 VWVSMGESNWEERVKELTPYQVNMEAMKKTGTPDDQLIFMHCLP 296 (359)
T ss_dssp CSCCTTCTTHHHHHHHHGGGCBCHHHHHTTCCCGGGCEEEECSC
T ss_pred ccccccccchHHHHHHhhccccCHHHHHhhCCCCCCEEEECCCC
Confidence 420 0 11 13457888888888 8888888753
No 328
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=97.46 E-value=0.00066 Score=58.91 Aligned_cols=95 Identities=12% Similarity=0.072 Sum_probs=69.3
Q ss_pred CCCCCEEEEEc-ccHHHHHHHHHHccCCCeEEEEcCCCC-Ch-hH-------HHhhC--CeecCCHHhhcccCCEEEEcC
Q 027408 33 DLEGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKM-DP-QL-------EKETG--AKFEEDLDTMLPKCDIVVVNT 100 (223)
Q Consensus 33 ~l~g~~igIiG-~G~iG~~iA~~l~~~G~~V~~~d~~~~-~~-~~-------~~~~g--~~~~~~l~e~l~~aDvVv~~~ 100 (223)
.+.|.+|++|| .+++.++++..+..+|++|.+..|... .. +. ++..| +....+++ +++++|+|..-+
T Consensus 150 ~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~-av~~aDVVytd~ 228 (355)
T 4a8p_A 150 KLEDCKVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS-SVEGADFLYTDV 228 (355)
T ss_dssp CGGGCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHSCEEEEECCGG-GGTTCSEEEECC
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEECCHH-HHcCCCEEEecc
Confidence 58899999999 589999999999999999999998642 22 21 12345 34567899 999999998633
Q ss_pred ----CC---C-hh----h--hhcccHHHHhcCCCCcEEEEcC
Q 027408 101 ----PL---T-EK----T--RGMFDKDRIAKMKKGVLIVNNA 128 (223)
Q Consensus 101 ----p~---~-~~----t--~~~i~~~~~~~mk~ga~ivn~s 128 (223)
.. . ++ . ..-++.+.++.+|++++|..+.
T Consensus 229 w~smgq~~~~~~er~~~~~~~y~vt~ell~~ak~dai~MHcL 270 (355)
T 4a8p_A 229 WYGLYEAELSEEERMKVFYPKYQVNQEMMDRAGANCKFMHCL 270 (355)
T ss_dssp SSEETTEECCHHHHHHHHTTTTCBCHHHHHHHCTTCEEEECS
T ss_pred cccCcchhhhhHHHHHHhccccccCHHHHHhcCCCcEEECCC
Confidence 10 0 11 1 1456788888888888888775
No 329
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.46 E-value=0.00019 Score=60.26 Aligned_cols=91 Identities=19% Similarity=0.312 Sum_probs=59.8
Q ss_pred CCEEEEEc-ccHHHHHHHHHHcc-CCCeEE-EEcCCCCCh---hHHH----hhCCeecCCHHhhcccCCEEEEcCCCChh
Q 027408 36 GKTVGTVG-CGRIGKLLLQRLKP-FNCNLL-YHDRVKMDP---QLEK----ETGAKFEEDLDTMLPKCDIVVVNTPLTEK 105 (223)
Q Consensus 36 g~~igIiG-~G~iG~~iA~~l~~-~G~~V~-~~d~~~~~~---~~~~----~~g~~~~~~l~e~l~~aDvVv~~~p~~~~ 105 (223)
-.+|+|+| +|+||+.+++.+.. -++++. ++|++.... +... ..++...+++++++.++|+|+-+++ |+
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~~DVVIDfT~--p~ 84 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAEADYLIDFTL--PE 84 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHHCSEEEECSC--HH
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhcCCCEEEEcCC--HH
Confidence 36899999 89999999998864 477866 478764211 0000 1155566899999999999998886 33
Q ss_pred hhhcccHHHHhcCCCCcEEEEcCCCC
Q 027408 106 TRGMFDKDRIAKMKKGVLIVNNARGA 131 (223)
Q Consensus 106 t~~~i~~~~~~~mk~ga~ivn~srg~ 131 (223)
.. .......++.|.-+|..+.|-
T Consensus 85 a~---~~~~~~al~~G~~vVigTTG~ 107 (272)
T 4f3y_A 85 GT---LVHLDAALRHDVKLVIGTTGF 107 (272)
T ss_dssp HH---HHHHHHHHHHTCEEEECCCCC
T ss_pred HH---HHHHHHHHHcCCCEEEECCCC
Confidence 21 122223345566677666663
No 330
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=97.45 E-value=0.00015 Score=61.06 Aligned_cols=88 Identities=15% Similarity=0.122 Sum_probs=64.7
Q ss_pred CCCEEEEEcc-cHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecC------CHHhhcccCCEEEEcCCCChhhh
Q 027408 35 EGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEE------DLDTMLPKCDIVVVNTPLTEKTR 107 (223)
Q Consensus 35 ~g~~igIiG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~------~l~e~l~~aDvVv~~~p~~~~t~ 107 (223)
.|++|.|+|. |.+|..+++.++..|++|++.++++...+.++++|..... ++.+.+...|+|+. +.. +
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid-~g~-~--- 199 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE-VRG-K--- 199 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-CSC-T---
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-CCH-H---
Confidence 5889999998 9999999999999999999999876555666677764321 12233356899988 763 1
Q ss_pred hcccHHHHhcCCCCcEEEEcCC
Q 027408 108 GMFDKDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 108 ~~i~~~~~~~mk~ga~ivn~sr 129 (223)
.....++.++++..++.++.
T Consensus 200 --~~~~~~~~l~~~G~~v~~g~ 219 (302)
T 1iz0_A 200 --EVEESLGLLAHGGRLVYIGA 219 (302)
T ss_dssp --THHHHHTTEEEEEEEEEC--
T ss_pred --HHHHHHHhhccCCEEEEEeC
Confidence 22677788888888888753
No 331
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=97.44 E-value=0.00036 Score=61.32 Aligned_cols=92 Identities=18% Similarity=0.204 Sum_probs=66.7
Q ss_pred CCCCEEEEEcccHHHHHHHHHHccCCC-eEEEEcCCCCChhHHHhhCCeec-----CCHHhhc------ccCCEEEEcCC
Q 027408 34 LEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFE-----EDLDTML------PKCDIVVVNTP 101 (223)
Q Consensus 34 l~g~~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~-----~~l~e~l------~~aDvVv~~~p 101 (223)
-.|.+|.|+|.|.+|...++.++.+|+ +|++.++++...+.++++|...+ .++.+.+ ...|+|+-++.
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g 291 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATG 291 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCC
Confidence 368999999999999999999999999 89999987766677788886432 2222222 24899999987
Q ss_pred CChhhhhcccHHHHhcC----CCCcEEEEcCC
Q 027408 102 LTEKTRGMFDKDRIAKM----KKGVLIVNNAR 129 (223)
Q Consensus 102 ~~~~t~~~i~~~~~~~m----k~ga~ivn~sr 129 (223)
....+. ...++.+ +++..++.++-
T Consensus 292 ~~~~~~----~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 292 VPQLVW----PQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp CHHHHH----HHHHHHHHHCSCCCCEEEECSC
T ss_pred CcHHHH----HHHHHHHHhccCCCcEEEEeCC
Confidence 332221 3334444 89999988874
No 332
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=97.44 E-value=0.00044 Score=61.96 Aligned_cols=101 Identities=22% Similarity=0.237 Sum_probs=71.3
Q ss_pred cCCCCCEEEEEccc----------HHHHHHHHHHccCCCeEEEEcCCCCChhHHHhh-CCeecCCHHhhcccCCEEEEcC
Q 027408 32 YDLEGKTVGTVGCG----------RIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKET-GAKFEEDLDTMLPKCDIVVVNT 100 (223)
Q Consensus 32 ~~l~g~~igIiG~G----------~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~-g~~~~~~l~e~l~~aDvVv~~~ 100 (223)
..+.|++|+|+|+. .-...+++.|...|.+|.+|||.-. .+....+ ++...+++++.++++|+|++++
T Consensus 318 ~~~~~~~v~vlGlafK~~~dD~ReSp~~~i~~~L~~~g~~v~~~DP~~~-~~~~~~~~~~~~~~~~~~~~~~ad~vvi~t 396 (446)
T 4a7p_A 318 GDVRGKTVGILGLTFKPNTDDMRDAPSLSIIAALQDAGATVKAYDPEGV-EQASKMLTDVEFVENPYAAADGADALVIVT 396 (446)
T ss_dssp SCCTTCEEEEECCSSSTTSCCCTTCSHHHHHHHHHHTSCEEEEECSSCH-HHHGGGCSSCCBCSCHHHHHTTBSEEEECS
T ss_pred ccCCCCEEEEEEEEeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCC-HhHHHhcCCceEecChhHHhcCCCEEEEee
Confidence 46899999999986 5678999999999999999999642 2222233 5666778999999999999998
Q ss_pred CCChhhhhcccHH-HHhcCCCCcEEEEcCCCCccCHHHH
Q 027408 101 PLTEKTRGMFDKD-RIAKMKKGVLIVNNARGAIMDTQAV 138 (223)
Q Consensus 101 p~~~~t~~~i~~~-~~~~mk~ga~ivn~srg~~vd~~al 138 (223)
.-.+ .+. ++.+ ..+.|+ ..+|+|+ |+ +.|.+.+
T Consensus 397 ~~~~-f~~-~d~~~~~~~~~-~~~i~D~-r~-~~~~~~~ 430 (446)
T 4a7p_A 397 EWDA-FRA-LDLTRIKNSLK-SPVLVDL-RN-IYPPAEL 430 (446)
T ss_dssp CCTT-TTS-CCHHHHHTTBS-SCBEECS-SC-CSCHHHH
T ss_pred CCHH-hhc-CCHHHHHHhcC-CCEEEEC-CC-CCCHHHH
Confidence 7322 222 3444 445565 4577775 54 3455444
No 333
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=97.44 E-value=0.00016 Score=62.55 Aligned_cols=90 Identities=14% Similarity=0.156 Sum_probs=67.0
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHH-hhCCeec---CCH---HhhcccCCEEEEcCCCChhhh
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEK-ETGAKFE---EDL---DTMLPKCDIVVVNTPLTEKTR 107 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~-~~g~~~~---~~l---~e~l~~aDvVv~~~p~~~~t~ 107 (223)
.|.+|.|+|.|.+|...++.++.+|++|++.++++...+.+. ++|...+ .+. .++....|+|+-++....
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~g~D~vid~~g~~~--- 256 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPVHH--- 256 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHSTTTEEEEEECCCSCC---
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhcCCCCEEEECCCChH---
Confidence 689999999999999999999999999999998765555555 6775421 222 223346899998887321
Q ss_pred hcccHHHHhcCCCCcEEEEcCC
Q 027408 108 GMFDKDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 108 ~~i~~~~~~~mk~ga~ivn~sr 129 (223)
.-...++.++++..++.++.
T Consensus 257 --~~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 257 --ALEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp --CSHHHHTTEEEEEEEEECSC
T ss_pred --HHHHHHHHhccCCEEEEeCC
Confidence 12567788899999988874
No 334
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=97.44 E-value=0.00034 Score=60.15 Aligned_cols=96 Identities=18% Similarity=0.117 Sum_probs=60.3
Q ss_pred CCCCEEEEEcccHHHHHHHHHHccCCC--eEEEEcCCCCChh-HHHh--------hCCeecCCHHhhcccCCEEEEcCCC
Q 027408 34 LEGKTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQ-LEKE--------TGAKFEEDLDTMLPKCDIVVVNTPL 102 (223)
Q Consensus 34 l~g~~igIiG~G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~-~~~~--------~g~~~~~~l~e~l~~aDvVv~~~p~ 102 (223)
-.+++|+|||.|.||..+|..+...|. ++..+|++....+ .+.+ .++....+..+.+++||+|+++...
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~aDiVvi~ag~ 86 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKDADLVVITAGA 86 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcCCCEEEECCCC
Confidence 467899999999999999999987776 8999998642111 0001 0222233445778999999998653
Q ss_pred C--h-hhh-hcc------cH---HHHhcCCCCcEEEEcCC
Q 027408 103 T--E-KTR-GMF------DK---DRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 103 ~--~-~t~-~~i------~~---~~~~~mk~ga~ivn~sr 129 (223)
. | .++ .++ -. +.+....|++++++++.
T Consensus 87 ~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtN 126 (326)
T 3vku_A 87 PQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAAN 126 (326)
T ss_dssp C----------------CHHHHHHHHHTTTCCSEEEECSS
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccC
Confidence 2 1 111 111 11 23344467899999974
No 335
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=97.43 E-value=0.00013 Score=62.48 Aligned_cols=114 Identities=15% Similarity=0.098 Sum_probs=65.6
Q ss_pred CEEEEEcccHHHHHHHHHHccCCC--eEEEEcCCCCChh-HHHhh--------CCeecCCHHhhcccCCEEEEcCCCChh
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQ-LEKET--------GAKFEEDLDTMLPKCDIVVVNTPLTEK 105 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~-~~~~~--------g~~~~~~l~e~l~~aDvVv~~~p~~~~ 105 (223)
+||+|||.|.+|.+++..+...+. ++..+|......+ .+.++ .+....+..+.+++||+|+++.+....
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVii~ag~~~~ 85 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVITAGAPQK 85 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEEECCCC---
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEECCCCCCC
Confidence 699999999999999999976665 7999998642121 11111 111222446778999999999864221
Q ss_pred h-----------hhccc--HHHHhcCCCCcEEEEcCCCCccCHHHHHHH--HHhCCccEE
Q 027408 106 T-----------RGMFD--KDRIAKMKKGVLIVNNARGAIMDTQAVVDA--CSSGHIAGY 150 (223)
Q Consensus 106 t-----------~~~i~--~~~~~~mk~ga~ivn~srg~~vd~~al~~~--L~~g~i~~a 150 (223)
. ..++. .+.+....|++.+++++-.-=+....+.+. +...++.|.
T Consensus 86 ~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~~k~s~~p~~rviG~ 145 (318)
T 1ez4_A 86 PGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPVDILTYATWKFSGFPKERVIGS 145 (318)
T ss_dssp -------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHHcCCCHHHEEec
Confidence 1 01110 122233368999999854322222333333 233355555
No 336
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=97.42 E-value=0.00029 Score=60.00 Aligned_cols=108 Identities=16% Similarity=0.103 Sum_probs=74.2
Q ss_pred CCCCCEEEEE-cc-cHHHHHHHHHHccCCCeEE-EEcCCCCChhHHHhhCCeecCCHHhhcc--cCCEEEEcCCCChhhh
Q 027408 33 DLEGKTVGTV-GC-GRIGKLLLQRLKPFNCNLL-YHDRVKMDPQLEKETGAKFEEDLDTMLP--KCDIVVVNTPLTEKTR 107 (223)
Q Consensus 33 ~l~g~~igIi-G~-G~iG~~iA~~l~~~G~~V~-~~d~~~~~~~~~~~~g~~~~~~l~e~l~--~aDvVv~~~p~~~~t~ 107 (223)
-+..++++|| |+ |+.|+.+++.++..|++++ .++|.....+ ..|+..+.+++|+.+ ..|++++++| ++..
T Consensus 10 l~~~~siaVV~Gasg~~G~~~~~~l~~~G~~~v~~VnP~~~g~~---i~G~~vy~sl~el~~~~~vD~avI~vP--~~~~ 84 (305)
T 2fp4_A 10 YVDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGGKT---HLGLPVFNTVKEAKEQTGATASVIYVP--PPFA 84 (305)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCE---ETTEEEESSHHHHHHHHCCCEEEECCC--HHHH
T ss_pred HhCCCcEEEEECCCCCHHHHHHHHHHHCCCcEEEEeCCCcCcce---ECCeeeechHHHhhhcCCCCEEEEecC--HHHH
Confidence 4677889999 99 9999999999999999843 5666431111 357777788999998 8999999999 3332
Q ss_pred hcccHHHHhcCCCC-cEEEEcCCCCc-cCHHHHHHHHHhC-Ccc
Q 027408 108 GMFDKDRIAKMKKG-VLIVNNARGAI-MDTQAVVDACSSG-HIA 148 (223)
Q Consensus 108 ~~i~~~~~~~mk~g-a~ivn~srg~~-vd~~al~~~L~~g-~i~ 148 (223)
.-+-++..+ .| ..+++.+-|-. -++..+.+..++. .+.
T Consensus 85 ~~~~~e~i~---~Gi~~iv~~t~G~~~~~~~~l~~~a~~~~gi~ 125 (305)
T 2fp4_A 85 AAAINEAID---AEVPLVVCITEGIPQQDMVRVKHRLLRQGKTR 125 (305)
T ss_dssp HHHHHHHHH---TTCSEEEECCCCCCHHHHHHHHHHHTTCSSCE
T ss_pred HHHHHHHHH---CCCCEEEEECCCCChHHHHHHHHHHHhcCCcE
Confidence 222233333 22 24567777643 2344788888877 655
No 337
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=97.42 E-value=0.00032 Score=60.39 Aligned_cols=111 Identities=11% Similarity=0.151 Sum_probs=71.3
Q ss_pred CEEEEEcccHHHHHHHHHHcc---------CCCeEE-EEcCCCCCh-----h--HHHhh-CCeecC--CHHhhcc--cCC
Q 027408 37 KTVGTVGCGRIGKLLLQRLKP---------FNCNLL-YHDRVKMDP-----Q--LEKET-GAKFEE--DLDTMLP--KCD 94 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~---------~G~~V~-~~d~~~~~~-----~--~~~~~-g~~~~~--~l~e~l~--~aD 94 (223)
.+|||+|+|.||+.+++.+.. .+.+|. ++|++.... . ..... .....+ ++++++. +.|
T Consensus 3 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~~~~~~~~d~~~ll~~~~iD 82 (327)
T 3do5_A 3 IKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRETGMLRDDAKAIEVVRSADYD 82 (327)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHHSSCSBCCCHHHHHHHSCCS
T ss_pred EEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhccCccccCCCCHHHHhcCCCCC
Confidence 379999999999999999875 466754 667654211 1 11111 122233 8999985 589
Q ss_pred EEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCcc-CHHHHHHHHHhCCcc
Q 027408 95 IVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIM-DTQAVVDACSSGHIA 148 (223)
Q Consensus 95 vVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~v-d~~al~~~L~~g~i~ 148 (223)
+|+.|+|....... .-+-....++.|..++....+.+. +-..|.+..++.+..
T Consensus 83 vVv~~tp~~~h~~~-a~~~~~~aL~aGkhVv~~NKkpla~~~~eL~~~A~~~g~~ 136 (327)
T 3do5_A 83 VLIEASVTRVDGGE-GVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERNGVR 136 (327)
T ss_dssp EEEECCCCC----C-HHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHHHTTCC
T ss_pred EEEECCCCcccchh-HHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHhhCCc
Confidence 99999995432211 224456778899999888665553 456677777776664
No 338
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=97.42 E-value=0.00015 Score=63.10 Aligned_cols=90 Identities=23% Similarity=0.275 Sum_probs=67.6
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCC-eEEEEcCCCCChhHHHhhCCeec-----CCHHhhcc--------cCCEEEEcC
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFE-----EDLDTMLP--------KCDIVVVNT 100 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~-----~~l~e~l~--------~aDvVv~~~ 100 (223)
.|.+|.|+|.|.+|...++.++.+|+ +|++.++++...+.++++|+..+ .++.+.+. ..|+|+-++
T Consensus 182 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~ 261 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECA 261 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECC
Confidence 58999999999999999999999999 89999987666667777886432 23333332 379998887
Q ss_pred CCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 027408 101 PLTEKTRGMFDKDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 101 p~~~~t~~~i~~~~~~~mk~ga~ivn~sr 129 (223)
.. +. .-...++.++++..++.++.
T Consensus 262 G~-~~----~~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 262 GV-AE----TVKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp CC-HH----HHHHHHHHEEEEEEEEECSC
T ss_pred CC-HH----HHHHHHHHhccCCEEEEEec
Confidence 62 11 22567788889888888864
No 339
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=97.42 E-value=0.00014 Score=58.94 Aligned_cols=97 Identities=19% Similarity=0.103 Sum_probs=61.4
Q ss_pred CCCCEEEEEc-ccHHHHHHHHHHccCC-CeEEEEcCCCCChhHHHhhCC-------eecCCHHhhcccCCEEEEcCCCCh
Q 027408 34 LEGKTVGTVG-CGRIGKLLLQRLKPFN-CNLLYHDRVKMDPQLEKETGA-------KFEEDLDTMLPKCDIVVVNTPLTE 104 (223)
Q Consensus 34 l~g~~igIiG-~G~iG~~iA~~l~~~G-~~V~~~d~~~~~~~~~~~~g~-------~~~~~l~e~l~~aDvVv~~~p~~~ 104 (223)
...|+|.|.| .|.||+.+++.|...| ++|++++|++...+.....++ ...++++++++.+|+|+.+.....
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~~ 100 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGED 100 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCSTT
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCCc
Confidence 4568899999 6999999999999999 899999987522111111111 112345677889999998776432
Q ss_pred hhhhcccHHHHhcCCC--CcEEEEcCCCCc
Q 027408 105 KTRGMFDKDRIAKMKK--GVLIVNNARGAI 132 (223)
Q Consensus 105 ~t~~~i~~~~~~~mk~--ga~ivn~srg~~ 132 (223)
.. ......+..|++ ...||++|...+
T Consensus 101 ~~--~~~~~~~~~~~~~~~~~iV~iSS~~~ 128 (236)
T 3qvo_A 101 LD--IQANSVIAAMKACDVKRLIFVLSLGI 128 (236)
T ss_dssp HH--HHHHHHHHHHHHTTCCEEEEECCCCC
T ss_pred hh--HHHHHHHHHHHHcCCCEEEEEeccee
Confidence 21 112344444432 246888887443
No 340
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=97.39 E-value=0.0015 Score=56.12 Aligned_cols=96 Identities=17% Similarity=0.110 Sum_probs=70.5
Q ss_pred CCCCCEEEEEccc--HHHHHHHHHHccCCCeEEEEcCCCCC---hh-H---H----Hh--hC--CeecCCHHhhcccCCE
Q 027408 33 DLEGKTVGTVGCG--RIGKLLLQRLKPFNCNLLYHDRVKMD---PQ-L---E----KE--TG--AKFEEDLDTMLPKCDI 95 (223)
Q Consensus 33 ~l~g~~igIiG~G--~iG~~iA~~l~~~G~~V~~~d~~~~~---~~-~---~----~~--~g--~~~~~~l~e~l~~aDv 95 (223)
.+.|.+|++||=+ ++.++++..+..+|++|.+..|.... .+ . + ++ .| +....+++++++++|+
T Consensus 158 ~l~gl~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDv 237 (328)
T 3grf_A 158 GFKGIKFAYCGDSMNNVTYDLMRGCALLGMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFHDCKKGCEGVDV 237 (328)
T ss_dssp TGGGCCEEEESCCSSHHHHHHHHHHHHHTCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEEESSHHHHHTTCSE
T ss_pred ccCCcEEEEeCCCCcchHHHHHHHHHHcCCEEEEECChHhhhCCCHHHHHHHHHHHhhccCCCeEEEEcCHHHHhcCCCE
Confidence 5899999999965 99999999999999999999986422 11 1 1 12 34 3456799999999999
Q ss_pred EEEcC----C-CCh---h-----hhhcccHHHHhcCCCCcEEEEcC
Q 027408 96 VVVNT----P-LTE---K-----TRGMFDKDRIAKMKKGVLIVNNA 128 (223)
Q Consensus 96 Vv~~~----p-~~~---~-----t~~~i~~~~~~~mk~ga~ivn~s 128 (223)
|..-+ . -.+ + ....++.+.++.+|++++|..+.
T Consensus 238 vytd~W~sm~iq~er~~~~~~~~~~y~vt~~~l~~a~~~ai~mH~l 283 (328)
T 3grf_A 238 VYTDSWMSYHITKEQKEARLKVLTPFQVDDAVMAVTSKRSIFMNCL 283 (328)
T ss_dssp EEECCCC--------CCTHHHHHGGGCBCHHHHTTSCTTCEEEECS
T ss_pred EEecCccccCCcHHHHHHHHHHhcCCCCCHHHHHhcCCCCEEECCC
Confidence 98631 1 001 0 12447899999999999998774
No 341
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=97.39 E-value=0.00032 Score=60.22 Aligned_cols=91 Identities=16% Similarity=0.106 Sum_probs=66.6
Q ss_pred CCCEEEEEcc-cHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeec------CCHHhhcc-----cCCEEEEcCCC
Q 027408 35 EGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE------EDLDTMLP-----KCDIVVVNTPL 102 (223)
Q Consensus 35 ~g~~igIiG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~------~~l~e~l~-----~aDvVv~~~p~ 102 (223)
.|++|.|+|. |.||..+++.++..|++|++.++++...+.++++|.... .++.+.+. ..|+|+.++..
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~ 248 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSVS 248 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEEEEEECSSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhCCCCCEEEECCCc
Confidence 5899999999 999999999999999999999987655556666665321 23444333 47999888762
Q ss_pred ChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 027408 103 TEKTRGMFDKDRIAKMKKGVLIVNNARG 130 (223)
Q Consensus 103 ~~~t~~~i~~~~~~~mk~ga~ivn~srg 130 (223)
.+ .....++.|+++..+++++..
T Consensus 249 ~~-----~~~~~~~~l~~~G~iv~~g~~ 271 (347)
T 2hcy_A 249 EA-----AIEASTRYVRANGTTVLVGMP 271 (347)
T ss_dssp HH-----HHHHHTTSEEEEEEEEECCCC
T ss_pred HH-----HHHHHHHHHhcCCEEEEEeCC
Confidence 11 225677888888888888753
No 342
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=97.39 E-value=0.00014 Score=62.39 Aligned_cols=90 Identities=20% Similarity=0.213 Sum_probs=66.9
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeec-----CCHHhhcc----cCCEEEEcCCCChh
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLDTMLP----KCDIVVVNTPLTEK 105 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~e~l~----~aDvVv~~~p~~~~ 105 (223)
.|++|.|+|.|.+|...++.++..|.+|++.++++...+.++++|.... .++.+.+. ..|+|+.++...+
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~~g~~~- 244 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVSPK- 244 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEESSCCHH-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEEeCCCHH-
Confidence 6899999999999999999999999999999987766667777776421 13333222 5788888875221
Q ss_pred hhhcccHHHHhcCCCCcEEEEcCC
Q 027408 106 TRGMFDKDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 106 t~~~i~~~~~~~mk~ga~ivn~sr 129 (223)
.-...++.++++..++.++-
T Consensus 245 ----~~~~~~~~l~~~G~iv~~G~ 264 (340)
T 3s2e_A 245 ----AFSQAIGMVRRGGTIALNGL 264 (340)
T ss_dssp ----HHHHHHHHEEEEEEEEECSC
T ss_pred ----HHHHHHHHhccCCEEEEeCC
Confidence 22567788888888888764
No 343
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=97.37 E-value=0.0001 Score=66.50 Aligned_cols=115 Identities=15% Similarity=0.088 Sum_probs=69.3
Q ss_pred CCEEEEEcccHH-HHHHHHHHccC-----CCeEEEEcCCCCChhH----HH----hhC----CeecCCHHhhcccCCEEE
Q 027408 36 GKTVGTVGCGRI-GKLLLQRLKPF-----NCNLLYHDRVKMDPQL----EK----ETG----AKFEEDLDTMLPKCDIVV 97 (223)
Q Consensus 36 g~~igIiG~G~i-G~~iA~~l~~~-----G~~V~~~d~~~~~~~~----~~----~~g----~~~~~~l~e~l~~aDvVv 97 (223)
.++|+|||.|.+ |.++|..|... +.+|..||+.+...+. .. ..+ +....++++.+++||+|+
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t~D~~eal~~AD~VV 107 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFVM 107 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEECCHHHHHcCCCEEE
Confidence 459999999998 66677666444 5679999997522111 11 111 233468888999999999
Q ss_pred EcCCCChh---hh----------------------------hccc--HHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHh
Q 027408 98 VNTPLTEK---TR----------------------------GMFD--KDRIAKMKKGVLIVNNARGAIMDTQAVVDACSS 144 (223)
Q Consensus 98 ~~~p~~~~---t~----------------------------~~i~--~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~ 144 (223)
+++|.... ++ .++- .+.+....|+++++|++..--+-..++.+....
T Consensus 108 iaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~T~~~~k~~p~ 187 (472)
T 1u8x_X 108 AHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPAAIVAEATRRLRPN 187 (472)
T ss_dssp ECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCHHHHHHHHHHHSTT
T ss_pred EcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhCCC
Confidence 99985221 00 0110 122333458999999987654444444444333
Q ss_pred CCccEE
Q 027408 145 GHIAGY 150 (223)
Q Consensus 145 g~i~~a 150 (223)
.++.|.
T Consensus 188 ~rViG~ 193 (472)
T 1u8x_X 188 SKILNI 193 (472)
T ss_dssp CCEEEC
T ss_pred CCEEEe
Confidence 355554
No 344
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=97.37 E-value=0.00023 Score=61.64 Aligned_cols=89 Identities=15% Similarity=0.054 Sum_probs=64.7
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeec-----CCHHhhc----c--cCCEEEEcCCCC
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLDTML----P--KCDIVVVNTPLT 103 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~e~l----~--~aDvVv~~~p~~ 103 (223)
.|++|.|+|.|.+|...++.++..|++|++.++++...+.++++|...+ .++.+.+ . ..|+|+-++. .
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~vid~~g-~ 267 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEIAG-G 267 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEEETT-S
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECCC-h
Confidence 6899999999999999999999999999999987655566677776422 1222222 1 5788888776 1
Q ss_pred hhhhhcccHHHHhcCCCCcEEEEcCC
Q 027408 104 EKTRGMFDKDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 104 ~~t~~~i~~~~~~~mk~ga~ivn~sr 129 (223)
+ .....++.++++..++.++.
T Consensus 268 ~-----~~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 268 A-----GLGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp S-----CHHHHHHHEEEEEEEEEECC
T ss_pred H-----HHHHHHHHhhcCCEEEEEec
Confidence 1 12566777888888877754
No 345
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=97.36 E-value=0.00021 Score=62.42 Aligned_cols=67 Identities=22% Similarity=0.356 Sum_probs=48.0
Q ss_pred CCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhH--HHhhCCeecCC---HHhhcccCCEEEEc
Q 027408 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQL--EKETGAKFEED---LDTMLPKCDIVVVN 99 (223)
Q Consensus 33 ~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~--~~~~g~~~~~~---l~e~l~~aDvVv~~ 99 (223)
-+.|++|+|+|.|.+|+.+++.++.+|++|+++|+++..... +...-...+.+ +.++++++|+|+..
T Consensus 11 ~~~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~ad~~~~~~~~d~~~l~~~~~~~dvI~~~ 82 (389)
T 3q2o_A 11 ILPGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKNSPCAQVADIEIVASYDDLKAIQHLAEISDVVTYE 82 (389)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTTCTTTTTCSEEEECCTTCHHHHHHHHHTCSEEEES
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCchHHhCCceEecCcCCHHHHHHHHHhCCEeeec
Confidence 478999999999999999999999999999999986532211 11000011222 56777889998654
No 346
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=97.35 E-value=0.00036 Score=61.96 Aligned_cols=109 Identities=13% Similarity=0.244 Sum_probs=66.0
Q ss_pred ccCCCCCEEEEEcccHHHHHHHHHHccCCCeEE-EEcCCC------------CChh----HHHhhC-------CeecCCH
Q 027408 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLL-YHDRVK------------MDPQ----LEKETG-------AKFEEDL 86 (223)
Q Consensus 31 ~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~-~~d~~~------------~~~~----~~~~~g-------~~~~~~l 86 (223)
+.++.|++|.|.|+|++|+..|+.|...|.+|+ +.|.++ ...+ ..+..+ .+.+ +.
T Consensus 207 g~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~~~~~~G~i~d~~Gld~~~l~~~~~~~g~i~~~~~a~~i-~~ 285 (421)
T 2yfq_A 207 GIKMEDAKIAVQGFGNVGTFTVKNIERQGGKVCAIAEWDRNEGNYALYNENGIDFKELLAYKEANKTLIGFPGAERI-TD 285 (421)
T ss_dssp TCCGGGSCEEEECCSHHHHHHHHHHHHTTCCEEECCBCCSSSCSBCCBCSSCCCHHHHHHHHHHHCC-------------
T ss_pred CCCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEecCCCccceEEECCCCCCHHHHHHHHHhcCCcccCCCceEe-Cc
Confidence 346899999999999999999999999999987 555551 1111 111112 1222 23
Q ss_pred Hhhc-ccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCcc
Q 027408 87 DTML-PKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (223)
Q Consensus 87 ~e~l-~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~ 148 (223)
++++ .+||+++-|.. .+.++.+....+ +..+|+-.+.+++ ..++ .+.|.+..+.
T Consensus 286 ~~~~~~~~DIliP~A~-----~n~i~~~~A~~l-~ak~VvEgAN~P~-t~ea-~~il~~~GI~ 340 (421)
T 2yfq_A 286 EEFWTKEYDIIVPAAL-----ENVITGERAKTI-NAKLVCEAANGPT-TPEG-DKVLTERGIN 340 (421)
T ss_dssp ---------CEEECSC-----SSCSCHHHHTTC-CCSEEECCSSSCS-CHHH-HHHHHHHTCE
T ss_pred cchhcCCccEEEEcCC-----cCcCCcccHHHc-CCeEEEeCCcccc-CHHH-HHHHHHCCCE
Confidence 4444 36999999886 556788888888 3567777777775 4433 3555555555
No 347
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=97.34 E-value=0.00014 Score=62.42 Aligned_cols=90 Identities=17% Similarity=0.152 Sum_probs=65.7
Q ss_pred CCCEEEEEcccHHHHHHHHHHccC--CCeEEEEcCCCCChhHHHhhCCeecCCHH-------hhcc--cCCEEEEcCCCC
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPF--NCNLLYHDRVKMDPQLEKETGAKFEEDLD-------TMLP--KCDIVVVNTPLT 103 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~--G~~V~~~d~~~~~~~~~~~~g~~~~~~l~-------e~l~--~aDvVv~~~p~~ 103 (223)
.|.+|.|+|.|.+|...++.++.+ |++|++.++++...+.++++|...+-+.. ++-. ..|+|+-++..
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~g~g~D~vid~~g~- 248 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGASIAIDLVGT- 248 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHHTTCCEEEEEESSCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhhcCCCccEEEECCCC-
Confidence 789999999999999999999998 99999999876555667777764322221 1111 57999888862
Q ss_pred hhhhhcccHHHHhcCCCCcEEEEcCC
Q 027408 104 EKTRGMFDKDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 104 ~~t~~~i~~~~~~~mk~ga~ivn~sr 129 (223)
+. .....++.++++..++.++.
T Consensus 249 ~~----~~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 249 EE----TTYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp HH----HHHHHHHHEEEEEEEEECCC
T ss_pred hH----HHHHHHHHhhcCCEEEEeCC
Confidence 11 12566777888888887764
No 348
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=97.33 E-value=0.00079 Score=57.48 Aligned_cols=64 Identities=30% Similarity=0.399 Sum_probs=47.1
Q ss_pred CEEEEEcc-cHHHHHHHHHHccCC--CeEEEEcCCCCChhHHHhhC-------Cee---cCCHHhhcccCCEEEEcCC
Q 027408 37 KTVGTVGC-GRIGKLLLQRLKPFN--CNLLYHDRVKMDPQLEKETG-------AKF---EEDLDTMLPKCDIVVVNTP 101 (223)
Q Consensus 37 ~~igIiG~-G~iG~~iA~~l~~~G--~~V~~~d~~~~~~~~~~~~g-------~~~---~~~l~e~l~~aDvVv~~~p 101 (223)
+||+|+|. |.+|..++..|...| .+|..+|+.+ ....+.++. +.. .+++++.+++||+|+++..
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~-~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~ag 77 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH-TPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAG 77 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS-HHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc-cHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEEEECCC
Confidence 48999998 999999999998777 5899999875 222222211 122 1367888999999999875
No 349
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=97.32 E-value=0.0003 Score=60.25 Aligned_cols=87 Identities=17% Similarity=0.222 Sum_probs=60.4
Q ss_pred CCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeec----C---CHHhh-cccCCEEEEcCCCChhhh
Q 027408 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE----E---DLDTM-LPKCDIVVVNTPLTEKTR 107 (223)
Q Consensus 36 g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~----~---~l~e~-l~~aDvVv~~~p~~~~t~ 107 (223)
.+++.|+|+|.+|+.+++.|...|. |.++|+++...+ ....++... . .++++ ++++|.|+++++..+.
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~d~~-- 190 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSE-- 190 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCSSHHH--
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCCccHH--
Confidence 5689999999999999999999999 999998764444 444454321 2 23344 6789999999985433
Q ss_pred hcccHHHHhcCCCCcEEEE
Q 027408 108 GMFDKDRIAKMKKGVLIVN 126 (223)
Q Consensus 108 ~~i~~~~~~~mk~ga~ivn 126 (223)
++.-....+.+.+...++-
T Consensus 191 n~~~~~~ar~~~~~~~iia 209 (336)
T 1lnq_A 191 TIHCILGIRKIDESVRIIA 209 (336)
T ss_dssp HHHHHHHHHTTCTTSEEEE
T ss_pred HHHHHHHHHHHCCCCeEEE
Confidence 3444566677777644443
No 350
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=97.32 E-value=0.0005 Score=54.80 Aligned_cols=91 Identities=11% Similarity=0.141 Sum_probs=58.9
Q ss_pred CEEEEEc-ccHHHHHHHHHHc-cCCCeEEEEcCCCC-ChhHH--HhhCCe-------ecCCHHhhcccCCEEEEcCCCCh
Q 027408 37 KTVGTVG-CGRIGKLLLQRLK-PFNCNLLYHDRVKM-DPQLE--KETGAK-------FEEDLDTMLPKCDIVVVNTPLTE 104 (223)
Q Consensus 37 ~~igIiG-~G~iG~~iA~~l~-~~G~~V~~~d~~~~-~~~~~--~~~g~~-------~~~~l~e~l~~aDvVv~~~p~~~ 104 (223)
|+|.|.| .|.||+.+++.|. ..|++|++++|++. ..+.. ...++. ..++++++++.+|+|+.+.....
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~n 85 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMESG 85 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCCH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCCC
Confidence 5799999 5999999999999 89999999998642 11111 111221 12345667889999998887431
Q ss_pred hhhhcccHHHHhcCCC-C-cEEEEcCCCC
Q 027408 105 KTRGMFDKDRIAKMKK-G-VLIVNNARGA 131 (223)
Q Consensus 105 ~t~~~i~~~~~~~mk~-g-a~ivn~srg~ 131 (223)
- . ....+..|++ + ..||++|...
T Consensus 86 ~-~---~~~~~~~~~~~~~~~iv~iSs~~ 110 (221)
T 3r6d_A 86 S-D---MASIVKALSRXNIRRVIGVSMAG 110 (221)
T ss_dssp H-H---HHHHHHHHHHTTCCEEEEEEETT
T ss_pred h-h---HHHHHHHHHhcCCCeEEEEeece
Confidence 1 1 3445555542 2 3677776544
No 351
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=97.31 E-value=0.00018 Score=63.59 Aligned_cols=89 Identities=15% Similarity=0.195 Sum_probs=56.8
Q ss_pred CEEEEEcccHHHHHHHHHHccCC---CeEEEEcCCCCCh-hHHHhh------CCee-------cCCHHhhccc--CCEEE
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFN---CNLLYHDRVKMDP-QLEKET------GAKF-------EEDLDTMLPK--CDIVV 97 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G---~~V~~~d~~~~~~-~~~~~~------g~~~-------~~~l~e~l~~--aDvVv 97 (223)
++|+|+|.|.||+.+++.|...| .+|.+++|+.... +.+..+ .+.. .+++++++++ +|+|+
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvVi 81 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIVL 81 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEEE
Confidence 58999999999999999998887 3899999975322 222221 1211 2346677777 89999
Q ss_pred EcCCCChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 027408 98 VNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARG 130 (223)
Q Consensus 98 ~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg 130 (223)
.++|... ..-+.+ ..++.|..+++++..
T Consensus 82 n~ag~~~--~~~v~~---a~l~~g~~vvD~a~~ 109 (405)
T 4ina_A 82 NIALPYQ--DLTIME---ACLRTGVPYLDTANY 109 (405)
T ss_dssp ECSCGGG--HHHHHH---HHHHHTCCEEESSCC
T ss_pred ECCCccc--ChHHHH---HHHHhCCCEEEecCC
Confidence 9988322 111112 223456667776543
No 352
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=97.31 E-value=0.0003 Score=59.60 Aligned_cols=104 Identities=14% Similarity=0.088 Sum_probs=68.4
Q ss_pred CEEEEEcc-cHHHHHHHHHHccCCCe-EEEEcCCCCChhHHHhhCCeecCCHHhhcc--cCCEEEEcCCCChhhhhcccH
Q 027408 37 KTVGTVGC-GRIGKLLLQRLKPFNCN-LLYHDRVKMDPQLEKETGAKFEEDLDTMLP--KCDIVVVNTPLTEKTRGMFDK 112 (223)
Q Consensus 37 ~~igIiG~-G~iG~~iA~~l~~~G~~-V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~--~aDvVv~~~p~~~~t~~~i~~ 112 (223)
.+++|+|+ |++|+.+++.+...|++ |..++|.....+ ..|+..+.+++++.. .+|++++++| ++...-+-+
T Consensus 14 ~~v~V~Gasg~~G~~~~~~l~~~g~~~V~~VnP~~~g~~---i~G~~vy~sl~el~~~~~~Dv~ii~vp--~~~~~~~v~ 88 (294)
T 2yv1_A 14 TKAIVQGITGRQGSFHTKKMLECGTKIVGGVTPGKGGQN---VHGVPVFDTVKEAVKETDANASVIFVP--APFAKDAVF 88 (294)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCEEEEECTTCTTCE---ETTEEEESSHHHHHHHHCCCEEEECCC--HHHHHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHHHhCCCeEEEEeCCCCCCce---ECCEeeeCCHHHHhhcCCCCEEEEccC--HHHHHHHHH
Confidence 45788898 99999999999888988 335565421111 257777889999998 8999999999 333222223
Q ss_pred HHHhcCCCCcE-EEEcCCCCc-cCHHHHHHHHHhCCcc
Q 027408 113 DRIAKMKKGVL-IVNNARGAI-MDTQAVVDACSSGHIA 148 (223)
Q Consensus 113 ~~~~~mk~ga~-ivn~srg~~-vd~~al~~~L~~g~i~ 148 (223)
+..+ .|.. +|..+.|-. -+++.|.++.++..+.
T Consensus 89 ea~~---~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~ 123 (294)
T 2yv1_A 89 EAID---AGIELIVVITEHIPVHDTMEFVNYAEDVGVK 123 (294)
T ss_dssp HHHH---TTCSEEEECCSCCCHHHHHHHHHHHHHHTCE
T ss_pred HHHH---CCCCEEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 3333 3333 455555532 3456788888776664
No 353
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=97.31 E-value=0.00058 Score=50.37 Aligned_cols=99 Identities=18% Similarity=0.225 Sum_probs=69.0
Q ss_pred CEEEEEcc----cHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhcccH
Q 027408 37 KTVGTVGC----GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDK 112 (223)
Q Consensus 37 ~~igIiG~----G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~ 112 (223)
++|+|||. ++.|..+.+.|...|++|+-++|... + -.|...+.++.++-. .|++++++|. +.+..++ +
T Consensus 5 ~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~--~---i~G~~~y~sl~dlp~-vDlavi~~p~-~~v~~~v-~ 76 (122)
T 3ff4_A 5 KKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKG--E---VLGKTIINERPVIEG-VDTVTLYINP-QNQLSEY-N 76 (122)
T ss_dssp CCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCS--E---ETTEECBCSCCCCTT-CCEEEECSCH-HHHGGGH-H
T ss_pred CEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCC--c---CCCeeccCChHHCCC-CCEEEEEeCH-HHHHHHH-H
Confidence 67999996 67999999999999999999998642 1 246666778888877 9999999992 2233333 3
Q ss_pred HHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCcc
Q 027408 113 DRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (223)
Q Consensus 113 ~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~ 148 (223)
+..+ +...+++++. |- .++++.+..++..++
T Consensus 77 e~~~-~g~k~v~~~~--G~--~~~e~~~~a~~~Gir 107 (122)
T 3ff4_A 77 YILS-LKPKRVIFNP--GT--ENEELEEILSENGIE 107 (122)
T ss_dssp HHHH-HCCSEEEECT--TC--CCHHHHHHHHHTTCE
T ss_pred HHHh-cCCCEEEECC--CC--ChHHHHHHHHHcCCe
Confidence 4333 3334566543 32 356777777777676
No 354
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=97.29 E-value=0.0014 Score=58.86 Aligned_cols=110 Identities=21% Similarity=0.269 Sum_probs=69.0
Q ss_pred ccCCCCCEEEEEcccHHHHHHHHHHccCCCeEE-EEc-------CCCCChh-H---HH---h-------h-----CCeec
Q 027408 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLL-YHD-------RVKMDPQ-L---EK---E-------T-----GAKFE 83 (223)
Q Consensus 31 ~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~-~~d-------~~~~~~~-~---~~---~-------~-----g~~~~ 83 (223)
+.+|.|++|.|-|+|++|+..|+.|...|.+|+ +.| +.....+ . .+ . + +.+.+
T Consensus 247 G~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~~~~~~~~~a~~v 326 (470)
T 2bma_A 247 NIPVEKQTAVVSGSGNVALYCVQKLLHLNVKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIKEYLNHSSTAKYF 326 (470)
T ss_dssp TCCGGGCEEEEECSSHHHHHHHHHHHHTTCEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGGGGGGTCSSCEEC
T ss_pred cCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHHHHHhhcCCcEEe
Confidence 457899999999999999999999999999977 444 3222111 1 00 0 0 22222
Q ss_pred CCHHhhc-ccCCEEEEcCCCChhhhhcccHHHHhcC-CCCc-EEEEcCCCCccCHHHHHHHHHhCCcc
Q 027408 84 EDLDTML-PKCDIVVVNTPLTEKTRGMFDKDRIAKM-KKGV-LIVNNARGAIMDTQAVVDACSSGHIA 148 (223)
Q Consensus 84 ~~l~e~l-~~aDvVv~~~p~~~~t~~~i~~~~~~~m-k~ga-~ivn~srg~~vd~~al~~~L~~g~i~ 148 (223)
+ .++++ .+||+.+-|.. .+.|+.+....+ ++++ +|+-.+.+. ...+| .+.|.+..|.
T Consensus 327 ~-~~~~~~~~~DI~iPcA~-----~~~I~~~na~~l~~~~ak~V~EgAN~p-~T~eA-~~~L~~rGIl 386 (470)
T 2bma_A 327 P-NEKPWGVPCTLAFPCAT-----QNDVDLDQAKLLQKNGCILVGEGANMP-STVDA-INLFKSNNII 386 (470)
T ss_dssp S-SCCTTSSCCSEEEECSS-----TTCBCSHHHHHHHHTTCCEEECCSSSC-BCHHH-HHHHHHTTCE
T ss_pred c-CcCeeecCccEEEeccc-----cCcCCHHHHHHHHhcCcEEEEeCCCCC-CCHHH-HHHHHHCCcE
Confidence 1 13333 37999988875 455666655555 2334 444444454 56666 6777777766
No 355
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=97.29 E-value=0.0013 Score=58.94 Aligned_cols=92 Identities=18% Similarity=0.280 Sum_probs=66.1
Q ss_pred cCCCCCEEEEEccc----------HHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhC--CeecCCHHhhcccCCEEEEc
Q 027408 32 YDLEGKTVGTVGCG----------RIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETG--AKFEEDLDTMLPKCDIVVVN 99 (223)
Q Consensus 32 ~~l~g~~igIiG~G----------~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g--~~~~~~l~e~l~~aDvVv~~ 99 (223)
..+.|++|+|+|+- .-...+++.|...|.+|.+|||.-. .+....++ +...+++++.++.+|+|+++
T Consensus 314 ~~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~-~~~~~~~~~~~~~~~~~~~~~~~ad~~vi~ 392 (450)
T 3gg2_A 314 GNVQGRCVAIWGLSFKPGTDDMREAPSLVLIEKLLEVGCRVRVYDPVAM-KEAQKRLGDKVEYTTDMYDAVRGAEALFHV 392 (450)
T ss_dssp TCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHGGGSEECSSHHHHTTTCSCEEEC
T ss_pred ccCCCCEEEEEeeeeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCc-HHHHHhcCccceecCCHHHHhcCCCEEEEc
Confidence 46899999999963 3468899999999999999999642 22223333 66678899999999999999
Q ss_pred CCCChhhhhcccH-HHHhcCCCCcEEEEc
Q 027408 100 TPLTEKTRGMFDK-DRIAKMKKGVLIVNN 127 (223)
Q Consensus 100 ~p~~~~t~~~i~~-~~~~~mk~ga~ivn~ 127 (223)
++-. +.+. ++. ...+.|+ ..+|+|.
T Consensus 393 t~~~-~f~~-~~~~~~~~~~~-~~~i~D~ 418 (450)
T 3gg2_A 393 TEWK-EFRM-PDWSALSQAMA-ASLVIDG 418 (450)
T ss_dssp SCCG-GGSS-CCHHHHHHHSS-SCEEEES
T ss_pred cCCH-HHhh-cCHHHHHHhcC-CCEEEEC
Confidence 8732 2222 343 3445565 5678885
No 356
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=97.29 E-value=0.00056 Score=59.34 Aligned_cols=89 Identities=22% Similarity=0.201 Sum_probs=53.2
Q ss_pred CEEEEEc-ccHHHHHHHHHHccCC-CeEEEEc--CCCCChhHHHhhC-------------Cee-cCCHHhhcc-cCCEEE
Q 027408 37 KTVGTVG-CGRIGKLLLQRLKPFN-CNLLYHD--RVKMDPQLEKETG-------------AKF-EEDLDTMLP-KCDIVV 97 (223)
Q Consensus 37 ~~igIiG-~G~iG~~iA~~l~~~G-~~V~~~d--~~~~~~~~~~~~g-------------~~~-~~~l~e~l~-~aDvVv 97 (223)
.+|+|+| .|.+|+.+++.|...+ ++|.++. +..........++ ... ..+++++++ ++|+|+
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvV~ 88 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKHEEFEDVDIVF 88 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTTSGGGTTCCEEE
T ss_pred ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHHHHhcCCCCEEE
Confidence 5899999 8999999999997664 5776664 3221111111111 111 114556656 899999
Q ss_pred EcCCCChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 027408 98 VNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARG 130 (223)
Q Consensus 98 ~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg 130 (223)
+|+|.... .+..-..++.|+.+|+.+.-
T Consensus 89 ~atp~~~~-----~~~a~~~~~aG~~VId~s~~ 116 (354)
T 1ys4_A 89 SALPSDLA-----KKFEPEFAKEGKLIFSNASA 116 (354)
T ss_dssp ECCCHHHH-----HHHHHHHHHTTCEEEECCST
T ss_pred ECCCchHH-----HHHHHHHHHCCCEEEECCch
Confidence 99992211 11122223568889988753
No 357
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=97.29 E-value=0.00024 Score=61.41 Aligned_cols=67 Identities=22% Similarity=0.320 Sum_probs=43.9
Q ss_pred CEEEEEcccHHHHHHHHHHcc-CCCeEE-EEcCCCCCh-hHHHhh------------------CCeecCCHHhhcccCCE
Q 027408 37 KTVGTVGCGRIGKLLLQRLKP-FNCNLL-YHDRVKMDP-QLEKET------------------GAKFEEDLDTMLPKCDI 95 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~-~G~~V~-~~d~~~~~~-~~~~~~------------------g~~~~~~l~e~l~~aDv 95 (223)
.+|||+|+|.||+.+++.+.. -++++. +.++++... ..+... ++....+.++++.++|+
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~~~vDv 81 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEADI 81 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTCSE
T ss_pred eEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHHhcCCCE
Confidence 379999999999999999876 467765 445543211 112111 11111256677788999
Q ss_pred EEEcCCCC
Q 027408 96 VVVNTPLT 103 (223)
Q Consensus 96 Vv~~~p~~ 103 (223)
|+.|+|..
T Consensus 82 V~~atp~~ 89 (337)
T 1cf2_P 82 VIDCTPEG 89 (337)
T ss_dssp EEECCSTT
T ss_pred EEECCCch
Confidence 99999944
No 358
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=97.26 E-value=0.0003 Score=60.59 Aligned_cols=90 Identities=20% Similarity=0.163 Sum_probs=66.4
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCC-eEEEEcCCCCChhHHHhhCCeec-----CCHHhhc----c--cCCEEEEcCCC
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFE-----EDLDTML----P--KCDIVVVNTPL 102 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~-----~~l~e~l----~--~aDvVv~~~p~ 102 (223)
.|.+|.|+|.|.+|...++.++..|. +|++.++++...+.++++|...+ .++.+.+ . ..|+|+-++..
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D~v~d~~g~ 245 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKVVIAGGD 245 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEEEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCCEEEECCCC
Confidence 58899999999999999999999999 79999987655667777886432 1222222 1 47889888763
Q ss_pred ChhhhhcccHHHHhcCCCCcEEEEcCC
Q 027408 103 TEKTRGMFDKDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 103 ~~~t~~~i~~~~~~~mk~ga~ivn~sr 129 (223)
.+ .....++.++++..++.++-
T Consensus 246 ~~-----~~~~~~~~l~~~G~~v~~G~ 267 (352)
T 3fpc_A 246 VH-----TFAQAVKMIKPGSDIGNVNY 267 (352)
T ss_dssp TT-----HHHHHHHHEEEEEEEEECCC
T ss_pred hH-----HHHHHHHHHhcCCEEEEecc
Confidence 21 22667788888888888763
No 359
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=97.26 E-value=0.00029 Score=63.03 Aligned_cols=114 Identities=18% Similarity=0.256 Sum_probs=72.4
Q ss_pred CCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCC--Ch--hHHHhhCCeec--CCHHhhccc-CCEEEEcC--C-C
Q 027408 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKM--DP--QLEKETGAKFE--EDLDTMLPK-CDIVVVNT--P-L 102 (223)
Q Consensus 33 ~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~--~~--~~~~~~g~~~~--~~l~e~l~~-aDvVv~~~--p-~ 102 (223)
++.|++|.|||.|..|.++|+.|+..|++|.++|.... .. +..++.|+... ...++++.+ +|+||++. | .
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~~~~~~~~~d~vv~spgi~~~ 85 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPLELLDEDFCYMIKNPGIPYN 85 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCCCGGGGGSCEEEEEECTTSCTT
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCChHHhhcCCCCEEEECCcCCCC
Confidence 57899999999999999999999999999999998542 11 23344576532 233456666 89998763 3 2
Q ss_pred Chhhh-------hcccH-HHHhcCCCCcEE-EEcCCCCccCHHHHHHHHHhCC
Q 027408 103 TEKTR-------GMFDK-DRIAKMKKGVLI-VNNARGAIMDTQAVVDACSSGH 146 (223)
Q Consensus 103 ~~~t~-------~~i~~-~~~~~mk~ga~i-vn~srg~~vd~~al~~~L~~g~ 146 (223)
+|... .++.+ +.+..+.+..+| |--+.|+.-...-+...|+...
T Consensus 86 ~p~~~~a~~~gi~v~~~~e~~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g 138 (451)
T 3lk7_A 86 NPMVKKALEKQIPVLTEVELAYLVSESQLIGITGSNGKTTTTTMIAEVLNAGG 138 (451)
T ss_dssp SHHHHHHHHTTCCEECHHHHHHHHCCSEEEEEECSSCHHHHHHHHHHHHHHTT
T ss_pred ChhHHHHHHCCCcEEeHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhcC
Confidence 23211 12332 333333333444 4455677666666667777644
No 360
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=97.26 E-value=0.00029 Score=59.12 Aligned_cols=38 Identities=16% Similarity=0.154 Sum_probs=34.9
Q ss_pred cCCCCCEEEEEc-ccHHHHHHHHHHccCCCeEEEEcCCC
Q 027408 32 YDLEGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVK 69 (223)
Q Consensus 32 ~~l~g~~igIiG-~G~iG~~iA~~l~~~G~~V~~~d~~~ 69 (223)
..+.|+++.|+| .|.+|+++++.|...|++|++++|+.
T Consensus 115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~ 153 (287)
T 1lu9_A 115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKL 153 (287)
T ss_dssp SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCH
Confidence 457899999999 99999999999999999999999964
No 361
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=97.26 E-value=0.00023 Score=61.79 Aligned_cols=90 Identities=18% Similarity=0.128 Sum_probs=65.5
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCC-eEEEEcCCCCChhHHHhhCCeec-----CCHHhhcc-----cCCEEEEcCCCC
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFE-----EDLDTMLP-----KCDIVVVNTPLT 103 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~-----~~l~e~l~-----~aDvVv~~~p~~ 103 (223)
.|++|.|+|.|.+|...++.++.+|. +|++.++++...+.++++|...+ .++.+.+. ..|+|+-++...
T Consensus 190 ~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~vid~~g~~ 269 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGSP 269 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEEEECSCCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCcEEEECCCCH
Confidence 58899999999999999999999999 69999987655566777776421 12222221 479998887621
Q ss_pred hhhhhcccHHHHhcCCCCcEEEEcCC
Q 027408 104 EKTRGMFDKDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 104 ~~t~~~i~~~~~~~mk~ga~ivn~sr 129 (223)
. .....++.++++..++.++.
T Consensus 270 -~----~~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 270 -E----ILKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp -H----HHHHHHHTEEEEEEEEECCC
T ss_pred -H----HHHHHHHHHhcCCEEEEeCC
Confidence 1 12567788888888888764
No 362
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=97.26 E-value=0.0035 Score=55.58 Aligned_cols=109 Identities=17% Similarity=0.240 Sum_probs=73.3
Q ss_pred ccCCCCCEEEEEcccHHHHHHHHHHccCCCeEE-EEcCC-------CCChhHH----HhhC-Ce--ecCCHHhhc-ccCC
Q 027408 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLL-YHDRV-------KMDPQLE----KETG-AK--FEEDLDTML-PKCD 94 (223)
Q Consensus 31 ~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~-~~d~~-------~~~~~~~----~~~g-~~--~~~~l~e~l-~~aD 94 (223)
+.+|.|++|.|.|+|++|+..|+.|...|.+|+ +.|.+ ....+.. +..+ +. .. +.++++ -.||
T Consensus 213 g~~l~gk~vaVqG~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~~g~v~~~~~-~~~e~~~~~~D 291 (419)
T 3aoe_E 213 GLDLRGARVVVQGLGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEATGSLPRLDL-APEEVFGLEAE 291 (419)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHSSCSCCCB-CTTTGGGSSCS
T ss_pred CCCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHhhCCcceeec-cchhhhccCce
Confidence 347899999999999999999999999999987 55552 2222211 1222 11 11 223444 4799
Q ss_pred EEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCcc
Q 027408 95 IVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (223)
Q Consensus 95 vVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~ 148 (223)
+++-|.. .+.++.+..+.++ =.+|+..+.+.+ ..++ .+.|.+..|.
T Consensus 292 VliP~A~-----~n~i~~~~A~~l~-ak~V~EgAN~p~-t~~A-~~~L~~~Gi~ 337 (419)
T 3aoe_E 292 VLVLAAR-----EGALDGDRARQVQ-AQAVVEVANFGL-NPEA-EAYLLGKGAL 337 (419)
T ss_dssp EEEECSC-----TTCBCHHHHTTCC-CSEEEECSTTCB-CHHH-HHHHHHHTCE
T ss_pred EEEeccc-----ccccccchHhhCC-ceEEEECCCCcC-CHHH-HHHHHHCCCE
Confidence 9999876 5567788888885 347788887775 4444 4566666665
No 363
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=97.25 E-value=0.0013 Score=52.06 Aligned_cols=93 Identities=14% Similarity=0.091 Sum_probs=58.9
Q ss_pred CEEEEEcc-cHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeec-CCHH----hhcccCCEEEEcCCCC-----hh
Q 027408 37 KTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-EDLD----TMLPKCDIVVVNTPLT-----EK 105 (223)
Q Consensus 37 ~~igIiG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-~~l~----e~l~~aDvVv~~~p~~-----~~ 105 (223)
|+|.|.|. |.||+.+++.|...|.+|++.+|++.........++..+ .++. +.+..+|+|+.+.... ..
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~~~ 80 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTEADLDSVDAVVDALSVPWGSGRGY 80 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCCCTTSSCTH
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccHhhcccCCEEEECCccCCCcchhh
Confidence 57999997 999999999999999999999997522221111233211 1111 6678899999887642 11
Q ss_pred hhhcccHHHHhcCCC-CcEEEEcCC
Q 027408 106 TRGMFDKDRIAKMKK-GVLIVNNAR 129 (223)
Q Consensus 106 t~~~i~~~~~~~mk~-ga~ivn~sr 129 (223)
..-......++.+++ +..+|++|.
T Consensus 81 ~n~~~~~~l~~a~~~~~~~~v~~SS 105 (224)
T 3h2s_A 81 LHLDFATHLVSLLRNSDTLAVFILG 105 (224)
T ss_dssp HHHHHHHHHHHTCTTCCCEEEEECC
T ss_pred HHHHHHHHHHHHHHHcCCcEEEEec
Confidence 111123455666653 467777765
No 364
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=97.24 E-value=0.00086 Score=58.24 Aligned_cols=94 Identities=15% Similarity=0.128 Sum_probs=58.5
Q ss_pred CCEEEEEc-ccHHHHHHHHHHccCC------CeEEEEc-CCCCChhHH---------HhhCCeecCCHHhhcccCCEEEE
Q 027408 36 GKTVGTVG-CGRIGKLLLQRLKPFN------CNLLYHD-RVKMDPQLE---------KETGAKFEEDLDTMLPKCDIVVV 98 (223)
Q Consensus 36 g~~igIiG-~G~iG~~iA~~l~~~G------~~V~~~d-~~~~~~~~~---------~~~g~~~~~~l~e~l~~aDvVv~ 98 (223)
.++|+|+| .|.+|+.+.+.|...+ .++..+. ++....... ....+... +.++ +.++|+|++
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~-~~~~-~~~~DvVf~ 86 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPT-EAAV-LGGHDAVFL 86 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEEC-CHHH-HTTCSEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccC-CHHH-hcCCCEEEE
Confidence 36899999 8999999999998766 4666554 322111111 01111222 3333 558999999
Q ss_pred cCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHH
Q 027408 99 NTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQA 137 (223)
Q Consensus 99 ~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~a 137 (223)
|+|... ..+....++.|+.+|+.|...-.+..+
T Consensus 87 alg~~~------s~~~~~~~~~G~~vIDlSa~~R~~~~~ 119 (352)
T 2nqt_A 87 ALPHGH------SAVLAQQLSPETLIIDCGADFRLTDAA 119 (352)
T ss_dssp CCTTSC------CHHHHHHSCTTSEEEECSSTTTCSCHH
T ss_pred CCCCcc------hHHHHHHHhCCCEEEEECCCccCCcch
Confidence 999432 344444446689999998765554433
No 365
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=97.24 E-value=0.00046 Score=59.06 Aligned_cols=94 Identities=19% Similarity=0.195 Sum_probs=59.5
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCC-eEEEEcCCC--CChh-----HHHh-----hC--CeecCCHHhhcccCCEEEEc
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVK--MDPQ-----LEKE-----TG--AKFEEDLDTMLPKCDIVVVN 99 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~~--~~~~-----~~~~-----~g--~~~~~~l~e~l~~aDvVv~~ 99 (223)
..++|+|||.|.||..+|..+...|. +|..+|+++ ...+ .... .. +....+ .+.+++||+|+++
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDvVIia 85 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSD-YADTADSDVVVIT 85 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESC-GGGGTTCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCC-HHHhCCCCEEEEe
Confidence 56799999999999999999988888 999999973 1111 1110 01 122233 4678899999999
Q ss_pred CCC--Chh-hh-hcc------cHH---HHhcCCCCcEEEEcCC
Q 027408 100 TPL--TEK-TR-GMF------DKD---RIAKMKKGVLIVNNAR 129 (223)
Q Consensus 100 ~p~--~~~-t~-~~i------~~~---~~~~mk~ga~ivn~sr 129 (223)
... .|. ++ .++ -++ .+....|++++++++.
T Consensus 86 ag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsN 128 (315)
T 3tl2_A 86 AGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTN 128 (315)
T ss_dssp CSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCC
Confidence 742 221 11 111 112 2223358899999984
No 366
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=97.23 E-value=0.0016 Score=58.56 Aligned_cols=97 Identities=15% Similarity=0.088 Sum_probs=67.4
Q ss_pred CCCCCEEEEEcccH----------HHHHHHHHHccCCCeEEEEcCCCCChhHHHhh-------------CCeecCCHHhh
Q 027408 33 DLEGKTVGTVGCGR----------IGKLLLQRLKPFNCNLLYHDRVKMDPQLEKET-------------GAKFEEDLDTM 89 (223)
Q Consensus 33 ~l~g~~igIiG~G~----------iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~-------------g~~~~~~l~e~ 89 (223)
.+.|++|+|+|+.- -...+++.|...|.+|.+|||.-...+....+ ++....+..+.
T Consensus 326 ~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (467)
T 2q3e_A 326 TVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSEDDQVSRLVTISKDPYEA 405 (467)
T ss_dssp CCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHCC------CHHHHHEEECSSHHHH
T ss_pred ccCCCEEEEEeeccCCCCcchhhChHHHHHHHHHHCCCEEEEEcCccCHHHHhhhhccccccccccccCceeecCCHHHH
Confidence 48999999999753 68889999999999999999964322211111 24445678889
Q ss_pred cccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCC
Q 027408 90 LPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGA 131 (223)
Q Consensus 90 l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~ 131 (223)
++++|+|++++.- ++.+.+=.....+.|+...+|+|. |+-
T Consensus 406 ~~~ad~~vi~t~~-~~f~~~~~~~~~~~~~~~~~i~D~-r~~ 445 (467)
T 2q3e_A 406 CDGAHAVVICTEW-DMFKELDYERIHKKMLKPAFIFDG-RRV 445 (467)
T ss_dssp HTTCSEEEECSCC-GGGGGSCHHHHHHHSCSSCEEEES-SCT
T ss_pred HhCCcEEEEecCC-hhhhcCCHHHHHHhcCCCCEEEeC-CCc
Confidence 9999999999984 233332223444667766657776 543
No 367
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=97.23 E-value=0.00095 Score=57.11 Aligned_cols=111 Identities=14% Similarity=0.060 Sum_probs=71.1
Q ss_pred CCEEEEEcccHHHHH-HHHHHccCCCeEEEEcCCCCCh--hHHHhhCCeec--CCHHhhc-ccCCEEEEcC--C-CChhh
Q 027408 36 GKTVGTVGCGRIGKL-LLQRLKPFNCNLLYHDRVKMDP--QLEKETGAKFE--EDLDTML-PKCDIVVVNT--P-LTEKT 106 (223)
Q Consensus 36 g~~igIiG~G~iG~~-iA~~l~~~G~~V~~~d~~~~~~--~~~~~~g~~~~--~~l~e~l-~~aDvVv~~~--p-~~~~t 106 (223)
.++|.|||.|.+|.+ +|+.|+..|++|.++|.+.... +..++.|+... .+.+++. .++|+||... | .+|..
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~~~~~l~~~~~d~vV~Spgi~~~~p~~ 83 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGFDAAQLDEFKADVYVIGNVAKRGMDVV 83 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESCCGGGGGSCCCSEEEECTTCCTTCHHH
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCCCHHHcCCCCCCEEEECCCcCCCCHHH
Confidence 578999999999996 9999999999999999865322 23445576543 3445555 5799998853 3 33332
Q ss_pred hh-------cccH-HHHhc--CCCCc-EEEEcCCCCccCHHHHHHHHHhCC
Q 027408 107 RG-------MFDK-DRIAK--MKKGV-LIVNNARGAIMDTQAVVDACSSGH 146 (223)
Q Consensus 107 ~~-------~i~~-~~~~~--mk~ga-~ivn~srg~~vd~~al~~~L~~g~ 146 (223)
.. ++.+ +.+.. ++... +-|--+.|+.-...-+...|+...
T Consensus 84 ~~a~~~gi~v~~~~e~~~~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~~g 134 (326)
T 3eag_A 84 EAILNLGLPYISGPQWLSENVLHHHWVLGVAGTHGKTTTASMLAWVLEYAG 134 (326)
T ss_dssp HHHHHTTCCEEEHHHHHHHHTGGGSEEEEEESSSCHHHHHHHHHHHHHHTT
T ss_pred HHHHHcCCcEEeHHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHHcC
Confidence 11 2332 33332 33333 345555787776666777777643
No 368
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=97.23 E-value=0.00048 Score=59.12 Aligned_cols=89 Identities=19% Similarity=0.177 Sum_probs=65.1
Q ss_pred CCCEEEEEcc-cHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeec----CCHHhhc----c--cCCEEEEcCCCC
Q 027408 35 EGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE----EDLDTML----P--KCDIVVVNTPLT 103 (223)
Q Consensus 35 ~g~~igIiG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~----~~l~e~l----~--~aDvVv~~~p~~ 103 (223)
.|++|.|+|. |.||...++.++.+|++|++.+++....+.++++|...+ .++.+.+ . ..|+|+-++...
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~v~~~~~~~g~Dvvid~~g~~ 238 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPIGGP 238 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESSTTHHHHHHHHTTTSCEEEEEESCC--
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCchhHHHHHHHHhCCCCceEEEECCchh
Confidence 6899999998 999999999999999999999987766667777775422 2232222 1 478888887631
Q ss_pred hhhhhcccHHHHhcCCCCcEEEEcCC
Q 027408 104 EKTRGMFDKDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 104 ~~t~~~i~~~~~~~mk~ga~ivn~sr 129 (223)
.....+..++++..++.++.
T Consensus 239 ------~~~~~~~~l~~~G~iv~~G~ 258 (342)
T 4eye_A 239 ------AFDDAVRTLASEGRLLVVGF 258 (342)
T ss_dssp ------CHHHHHHTEEEEEEEEEC--
T ss_pred ------HHHHHHHhhcCCCEEEEEEc
Confidence 23667788888888888753
No 369
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=97.22 E-value=0.0022 Score=54.91 Aligned_cols=93 Identities=5% Similarity=-0.016 Sum_probs=64.8
Q ss_pred CCCCCEEEE-----EcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCC--h-
Q 027408 33 DLEGKTVGT-----VGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLT--E- 104 (223)
Q Consensus 33 ~l~g~~igI-----iG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~--~- 104 (223)
.+. .+|++ +|=+++.++++..+..+|++|.+..|...........++....+++++++++|+|....=.. .
T Consensus 166 ~l~-l~ia~a~~~~vGD~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~d~~eav~~aDvvy~~~w~s~g~~ 244 (324)
T 1js1_X 166 RPK-VVMTWAPHPRPLPQAVPNSFAEWMNATDYEFVITHPEGYELDPKFVGNARVEYDQMKAFEGADFIYAKNWAAYTGD 244 (324)
T ss_dssp SCE-EEEECCCCSSCCCSHHHHHHHHHHHTSSSEEEEECCTTCCCCHHHHTTCEEESCHHHHHTTCSEEEECCCCCCSTT
T ss_pred Cee-EEEEEEcccccCCcchHHHHHHHHHHCCCEEEEeCCcccCCChhhccceEEECCHHHHhCCCCEEEecCcccCCCc
Confidence 356 89999 99999999999999999999999998653222111135666789999999999998843210 0
Q ss_pred --------hhhhcccHHHHhcCCCCcEEEEc
Q 027408 105 --------KTRGMFDKDRIAKMKKGVLIVNN 127 (223)
Q Consensus 105 --------~t~~~i~~~~~~~mk~ga~ivn~ 127 (223)
.....++.+.++.+| +++|..+
T Consensus 245 ~~~~~~~r~~~y~vt~e~l~~a~-~ai~MHc 274 (324)
T 1js1_X 245 NYGQILSTDRNWTVGDRQMAVTN-NAYFMHC 274 (324)
T ss_dssp CTTCCCCCCTTSSBCHHHHTTSS-SCEEECC
T ss_pred cccchHHHhcCcccCHHHHHhcC-CcEEECC
Confidence 012345556666555 5555544
No 370
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=97.22 E-value=0.0022 Score=56.93 Aligned_cols=110 Identities=22% Similarity=0.332 Sum_probs=70.3
Q ss_pred ccCCCCCEEEEEcccHHHHHHHHHHccCCCeEE-EEcCC-------CCChhHHHhh----CC------------eecCCH
Q 027408 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLL-YHDRV-------KMDPQLEKET----GA------------KFEEDL 86 (223)
Q Consensus 31 ~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~-~~d~~-------~~~~~~~~~~----g~------------~~~~~l 86 (223)
+.++.|++|.|.|+|++|+..|+.|...|.+|+ +.|.+ ....+...++ +. ..+.+.
T Consensus 205 g~~l~gk~vaVqG~GnVG~~aa~~L~e~GakVVavsD~~G~i~dp~GlD~~~l~~~k~~~g~~~v~~y~~~~~~~~~~~~ 284 (421)
T 1v9l_A 205 WGGIEGKTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDINGVAYRKEGLNVELIQKNKGLTGPALVELFTTKDNAEFVKNP 284 (421)
T ss_dssp HSCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSCEEECTTCCCTHHHHHTTTSCHHHHHHHHHHTSCCCCCSST
T ss_pred CCCcCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEECCCcEEECCCCCCHHHHHHHHHhhCCccccccccccCceEeCCc
Confidence 347999999999999999999999999999987 44442 1112211111 11 122133
Q ss_pred Hhhc-ccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCcc
Q 027408 87 DTML-PKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (223)
Q Consensus 87 ~e~l-~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~ 148 (223)
++++ ..||+++-|.- .+.|+.+..+.++ =.+|+-.+.+.+ ..++ .+.|.+..+.
T Consensus 285 ~~~~~~~~Dil~P~A~-----~~~I~~~~a~~l~-ak~V~EgAN~p~-t~~a-~~~l~~~Gi~ 339 (421)
T 1v9l_A 285 DAIFKLDVDIFVPAAI-----ENVIRGDNAGLVK-ARLVVEGANGPT-TPEA-ERILYERGVV 339 (421)
T ss_dssp TGGGGCCCSEEEECSC-----SSCBCTTTTTTCC-CSEEECCSSSCB-CHHH-HHHHHTTTCE
T ss_pred hhhhcCCccEEEecCc-----CCccchhhHHHcC-ceEEEecCCCcC-CHHH-HHHHHHCCCE
Confidence 4555 47999998875 4456666666674 245566666654 5444 4667776666
No 371
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=97.22 E-value=0.0019 Score=56.11 Aligned_cols=90 Identities=14% Similarity=0.210 Sum_probs=56.1
Q ss_pred CCCEEEEEc-ccHHHHHHHHHHccCC-CeEEEEcCCC-CChhHHHhh----CC---e-ecCCHHhhcccCCEEEEcCCCC
Q 027408 35 EGKTVGTVG-CGRIGKLLLQRLKPFN-CNLLYHDRVK-MDPQLEKET----GA---K-FEEDLDTMLPKCDIVVVNTPLT 103 (223)
Q Consensus 35 ~g~~igIiG-~G~iG~~iA~~l~~~G-~~V~~~d~~~-~~~~~~~~~----g~---~-~~~~l~e~l~~aDvVv~~~p~~ 103 (223)
...+|+|+| +|.+|+.+++.|.... +++.++.... ...+....+ +. . .+.+ ++.+.++|+|++|+|..
T Consensus 15 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v~~dl~~~~-~~~~~~vDvVf~atp~~ 93 (359)
T 1xyg_A 15 KDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLVSVK-DADFSTVDAVFCCLPHG 93 (359)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSCCCCCBCGG-GCCGGGCSEEEECCCTT
T ss_pred cCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcccccceecc-hhHhcCCCEEEEcCCch
Confidence 346899999 8999999999998764 4777665432 211121111 11 0 1122 45567899999999933
Q ss_pred hhhhhcccHHHHhcCCCCcEEEEcCCCC
Q 027408 104 EKTRGMFDKDRIAKMKKGVLIVNNARGA 131 (223)
Q Consensus 104 ~~t~~~i~~~~~~~mk~ga~ivn~srg~ 131 (223)
.. .+.....+.|+.+|+.+...
T Consensus 94 ~s------~~~a~~~~aG~~VId~sa~~ 115 (359)
T 1xyg_A 94 TT------QEIIKELPTALKIVDLSADF 115 (359)
T ss_dssp TH------HHHHHTSCTTCEEEECSSTT
T ss_pred hH------HHHHHHHhCCCEEEECCccc
Confidence 22 23333337789999998644
No 372
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=97.21 E-value=0.0023 Score=54.43 Aligned_cols=93 Identities=19% Similarity=0.273 Sum_probs=65.2
Q ss_pred CCCCCEEEEEcc---cHHHHHHHHHHccC-CCeEEEEcCCC-C-ChhH---HHhhCCe--ecCCHHhhcccCCEEEEcCC
Q 027408 33 DLEGKTVGTVGC---GRIGKLLLQRLKPF-NCNLLYHDRVK-M-DPQL---EKETGAK--FEEDLDTMLPKCDIVVVNTP 101 (223)
Q Consensus 33 ~l~g~~igIiG~---G~iG~~iA~~l~~~-G~~V~~~d~~~-~-~~~~---~~~~g~~--~~~~l~e~l~~aDvVv~~~p 101 (223)
.+.|.+|++||= |++.++++..+..+ |++|.+..|.. . +.+. +++.|.. ...+++++++++|+|....-
T Consensus 148 ~l~glkva~vGD~~~~rva~Sl~~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvy~~~~ 227 (306)
T 4ekn_B 148 RIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRI 227 (306)
T ss_dssp CSTTCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCGGGCCTTCSEEEECCC
T ss_pred CcCCCEEEEEcCCCCCcHHHHHHHHHHhcCCCEEEEECCcccccCHHHHHHHHHcCCEEEEEcCHHHHhcCCCEEEeCCc
Confidence 589999999996 68999999999999 99999999864 2 2222 2344543 46799999999999987532
Q ss_pred ------CChhh-----hhcccHHHHhcCCCCcEEEEc
Q 027408 102 ------LTEKT-----RGMFDKDRIAKMKKGVLIVNN 127 (223)
Q Consensus 102 ------~~~~t-----~~~i~~~~~~~mk~ga~ivn~ 127 (223)
...+. ..-++.+.++. ++++|..+
T Consensus 228 q~er~~~~~e~~~~~~~y~v~~~~l~~--~~ai~mH~ 262 (306)
T 4ekn_B 228 QKERFPDPNEYEKVKGSYKIKREYVEG--KKFIIMHP 262 (306)
T ss_dssp CGGGCCSHHHHHHHHHHHCBCHHHHTT--CCCEEECC
T ss_pred ccccCCCHHHHHHhccCcEECHHHHcC--CCCEEECC
Confidence 11111 13356666665 66666655
No 373
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=97.21 E-value=0.00023 Score=55.99 Aligned_cols=89 Identities=11% Similarity=0.158 Sum_probs=58.4
Q ss_pred CCCEEEEEc-ccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeec-----CCHHh-h---c--ccCCEEEEcCCC
Q 027408 35 EGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLDT-M---L--PKCDIVVVNTPL 102 (223)
Q Consensus 35 ~g~~igIiG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~e-~---l--~~aDvVv~~~p~ 102 (223)
.|++|.|+| .|.||..+++.++..|++|++.++++...+..++.|.... .+..+ + . ...|+|+.+..
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g- 116 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLA- 116 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCC-
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEeeCCcHHHHHHHHHHhCCCCCeEEEECCc-
Confidence 689999999 6999999999999999999999986533334444443211 11111 1 1 13677776654
Q ss_pred ChhhhhcccHHHHhcCCCCcEEEEcCC
Q 027408 103 TEKTRGMFDKDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 103 ~~~t~~~i~~~~~~~mk~ga~ivn~sr 129 (223)
.. .....++.|+++..+|+++.
T Consensus 117 -~~----~~~~~~~~l~~~G~~v~~g~ 138 (198)
T 1pqw_A 117 -GE----AIQRGVQILAPGGRFIELGK 138 (198)
T ss_dssp -TH----HHHHHHHTEEEEEEEEECSC
T ss_pred -hH----HHHHHHHHhccCCEEEEEcC
Confidence 11 12566677777777777754
No 374
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=97.19 E-value=0.00023 Score=59.76 Aligned_cols=39 Identities=28% Similarity=0.399 Sum_probs=35.8
Q ss_pred ccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCC
Q 027408 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVK 69 (223)
Q Consensus 31 ~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~ 69 (223)
..+|.|++|.|||.|.+|...++.|...|++|+++++..
T Consensus 8 ~~~l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 8 AHQLKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp EECCTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred EEEcCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 357899999999999999999999999999999999754
No 375
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=97.19 E-value=0.00059 Score=58.41 Aligned_cols=89 Identities=15% Similarity=0.122 Sum_probs=66.2
Q ss_pred CCCEEEEEccc-HHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeec-----CCHHhhc------ccCCEEEEcCCC
Q 027408 35 EGKTVGTVGCG-RIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLDTML------PKCDIVVVNTPL 102 (223)
Q Consensus 35 ~g~~igIiG~G-~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~e~l------~~aDvVv~~~p~ 102 (223)
.|++|.|+|.| .||...++.++..|++|++.+++....+.++++|.... .++.+.+ ...|+|+.++..
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~ 223 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGG 223 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCH
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCcEEEECCCC
Confidence 58999999997 99999999999999999999998877777777776421 1222222 257999888762
Q ss_pred ChhhhhcccHHHHhcCCCCcEEEEcCC
Q 027408 103 TEKTRGMFDKDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 103 ~~~t~~~i~~~~~~~mk~ga~ivn~sr 129 (223)
+. . .+.+..++++..++.++-
T Consensus 224 -~~----~-~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 224 -PD----G-NELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp -HH----H-HHHHHTEEEEEEEEECCC
T ss_pred -hh----H-HHHHHHhcCCCEEEEEee
Confidence 11 1 345578889888888864
No 376
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=97.19 E-value=0.00026 Score=57.21 Aligned_cols=67 Identities=21% Similarity=0.234 Sum_probs=46.8
Q ss_pred CCEEEEEcccHHHHHHHHHH--ccCCCeEE-EEcCCCC-ChhHHHhhCCe--ecCCHHhhccc--CCEEEEcCCC
Q 027408 36 GKTVGTVGCGRIGKLLLQRL--KPFNCNLL-YHDRVKM-DPQLEKETGAK--FEEDLDTMLPK--CDIVVVNTPL 102 (223)
Q Consensus 36 g~~igIiG~G~iG~~iA~~l--~~~G~~V~-~~d~~~~-~~~~~~~~g~~--~~~~l~e~l~~--aDvVv~~~p~ 102 (223)
..+++|+|+|++|+++++.+ ...|+++. ++|.++. ....+.-.|+. ..+++++++++ .|.+++|+|.
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~~i~GvpV~~~~dL~~~v~~~~Id~vIIAvPs 158 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTEDGIPVYGISTINDHLIDSDIETAILTVPS 158 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTCBCTTCCBEEEGGGHHHHC-CCSCCEEEECSCG
T ss_pred CCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchhccCceeECCeEEeCHHHHHHHHHHcCCCEEEEecCc
Confidence 46899999999999999984 45678854 7787654 22210112443 35688888864 8999999993
No 377
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=97.18 E-value=0.00043 Score=58.99 Aligned_cols=64 Identities=20% Similarity=0.233 Sum_probs=45.3
Q ss_pred EEEEEcccHHHHHHHHHHccCCC-eEEEEcCCCCChhH-HHh-------h--C--CeecCCHHhhcccCCEEEEcCCC
Q 027408 38 TVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQL-EKE-------T--G--AKFEEDLDTMLPKCDIVVVNTPL 102 (223)
Q Consensus 38 ~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~-~~~-------~--g--~~~~~~l~e~l~~aDvVv~~~p~ 102 (223)
||+|||.|.+|..+|..+...|+ +|..+|++....+. +.+ . . +....+. +.+++||+|+++.+.
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~~ag~ 77 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSY-EDMRGSDIVLVTAGI 77 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCSC
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCH-HHhCCCCEEEEeCCC
Confidence 58999999999999998876676 69999987532221 111 1 2 2222455 678999999999663
No 378
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=97.18 E-value=0.0017 Score=55.31 Aligned_cols=89 Identities=20% Similarity=0.175 Sum_probs=64.3
Q ss_pred CCCEEEEEc-ccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeec-----CCHHhhc------ccCCEEEEcCCC
Q 027408 35 EGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLDTML------PKCDIVVVNTPL 102 (223)
Q Consensus 35 ~g~~igIiG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~e~l------~~aDvVv~~~p~ 102 (223)
.|++|.|+| .|.+|...++.++..|++|++.++++...+.++++|.... .++.+.+ ...|+|+.++..
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~ 227 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGK 227 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEEEECCGG
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEEEECCCh
Confidence 689999999 8999999999999999999999987655556666665321 1222221 247888887762
Q ss_pred ChhhhhcccHHHHhcCCCCcEEEEcCC
Q 027408 103 TEKTRGMFDKDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 103 ~~~t~~~i~~~~~~~mk~ga~ivn~sr 129 (223)
-.....++.++++..++.++.
T Consensus 228 ------~~~~~~~~~l~~~G~iv~~G~ 248 (334)
T 3qwb_A 228 ------DTFEISLAALKRKGVFVSFGN 248 (334)
T ss_dssp ------GGHHHHHHHEEEEEEEEECCC
T ss_pred ------HHHHHHHHHhccCCEEEEEcC
Confidence 123567778888888888753
No 379
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=97.18 E-value=0.00025 Score=58.63 Aligned_cols=107 Identities=18% Similarity=0.216 Sum_probs=68.0
Q ss_pred HHHHHcCCCccCcccCcccCCCCCEEEEEcccHHHHHHHHHHccCCC-eEEEEcCCCCCh-------------------h
Q 027408 14 HHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDP-------------------Q 73 (223)
Q Consensus 14 ~~~~~~~~w~~~~~~~~~~~l~g~~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~-------------------~ 73 (223)
.++++-..|.... ...|.+++|.|+|+|.+|..+++.|...|. ++.++|+..... +
T Consensus 10 ~Rq~~l~~~g~~~----q~~l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~ 85 (251)
T 1zud_1 10 SRQILLDDIALDG----QQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQ 85 (251)
T ss_dssp HHHHTSTTTHHHH----HHHHHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHH
T ss_pred hhhcchhhcCHHH----HHHHhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHH
Confidence 3444444565321 236899999999999999999999999997 688887642110 0
Q ss_pred -HHH---hh--CC--eec------CCHHhhcccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcC
Q 027408 74 -LEK---ET--GA--KFE------EDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNA 128 (223)
Q Consensus 74 -~~~---~~--g~--~~~------~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~s 128 (223)
.++ +. ++ ... ++++++++++|+|+.++. +..++..+++...+. +..+|+.+
T Consensus 86 ~~~~~l~~~np~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d-~~~~r~~l~~~~~~~---~~p~i~~~ 150 (251)
T 1zud_1 86 VSQQRLTQLNPDIQLTALQQRLTGEALKDAVARADVVLDCTD-NMATRQEINAACVAL---NTPLITAS 150 (251)
T ss_dssp HHHHHHHHHCTTSEEEEECSCCCHHHHHHHHHHCSEEEECCS-SHHHHHHHHHHHHHT---TCCEEEEE
T ss_pred HHHHHHHHHCCCCEEEEEeccCCHHHHHHHHhcCCEEEECCC-CHHHHHHHHHHHHHh---CCCEEEEe
Confidence 011 11 11 111 135567888999998886 666777777766553 33355543
No 380
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=97.18 E-value=0.00036 Score=59.08 Aligned_cols=87 Identities=15% Similarity=0.147 Sum_probs=63.8
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeec-CCHHhhcccCCEEEEcCCCChhhhhcccHH
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-EDLDTMLPKCDIVVVNTPLTEKTRGMFDKD 113 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~ 113 (223)
.|.+|.|+|.|.+|...++.++..|++|++.+ ++...+.++++|...+ .+.+++-...|+|+-++.. +. . ..
T Consensus 142 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~d~~~v~~g~Dvv~d~~g~-~~----~-~~ 214 (315)
T 3goh_A 142 KQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKRGVRHLYREPSQVTQKYFAIFDAVNS-QN----A-AA 214 (315)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHHTEEEEESSGGGCCSCEEEEECC-------------T
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHcCCCEEEcCHHHhCCCccEEEECCCc-hh----H-HH
Confidence 68999999999999999999999999999999 7777788888887532 2233333457998888762 11 1 34
Q ss_pred HHhcCCCCcEEEEcC
Q 027408 114 RIAKMKKGVLIVNNA 128 (223)
Q Consensus 114 ~~~~mk~ga~ivn~s 128 (223)
.++.++++..++.++
T Consensus 215 ~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 215 LVPSLKANGHIICIQ 229 (315)
T ss_dssp TGGGEEEEEEEEEEC
T ss_pred HHHHhcCCCEEEEEe
Confidence 567888888888774
No 381
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=97.17 E-value=0.00045 Score=58.70 Aligned_cols=88 Identities=22% Similarity=0.181 Sum_probs=68.1
Q ss_pred CCCEEEEEc-ccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeec-----CC-HHhhcccCCEEEEcCCCChhhh
Q 027408 35 EGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----ED-LDTMLPKCDIVVVNTPLTEKTR 107 (223)
Q Consensus 35 ~g~~igIiG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~-l~e~l~~aDvVv~~~p~~~~t~ 107 (223)
.|.+|.|+| .|.+|...++.++..|++|++.++.. ..+.++++|...+ .+ +.+.+...|+|+-++..
T Consensus 152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~~g~----- 225 (321)
T 3tqh_A 152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-NHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLVGG----- 225 (321)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-HHHHHHHHTCSEEEETTTSCHHHHCCSCEEEEEESSCH-----
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-hHHHHHHcCCCEEEeCCCcchhhhhccCCCEEEECCCc-----
Confidence 688999997 99999999999999999998887543 3566677776421 23 56666789999998871
Q ss_pred hcccHHHHhcCCCCcEEEEcCC
Q 027408 108 GMFDKDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 108 ~~i~~~~~~~mk~ga~ivn~sr 129 (223)
... ...++.++++..++.++.
T Consensus 226 ~~~-~~~~~~l~~~G~iv~~g~ 246 (321)
T 3tqh_A 226 DVG-IQSIDCLKETGCIVSVPT 246 (321)
T ss_dssp HHH-HHHGGGEEEEEEEEECCS
T ss_pred HHH-HHHHHhccCCCEEEEeCC
Confidence 122 678899999999998853
No 382
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=97.17 E-value=0.0012 Score=57.93 Aligned_cols=96 Identities=15% Similarity=0.084 Sum_probs=66.7
Q ss_pred CCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhcccHHHH
Q 027408 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRI 115 (223)
Q Consensus 36 g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~ 115 (223)
-.++.|+|.|.+|+++++.++.+|++|+++|+.+.. + + .+-++.+|-++...| ...+. . +
T Consensus 204 ~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~~---~---------~-~~~fp~a~~~~~~~p-----~~~~~-~-~ 263 (386)
T 2we8_A 204 RPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVF---A---------T-TARFPTADEVVVDWP-----HRYLA-A-Q 263 (386)
T ss_dssp CCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTTT---S---------C-TTTCSSSSEEEESCH-----HHHHH-H-H
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhh---c---------c-cccCCCceEEEeCCh-----HHHHH-h-h
Confidence 458999999999999999999999999999986421 1 1 122356665555554 11111 1 1
Q ss_pred h---cCCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEE
Q 027408 116 A---KMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYS 151 (223)
Q Consensus 116 ~---~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~ 151 (223)
. .+.+++.+|-++++.-.|...|..+|+.+...+.+
T Consensus 264 ~~~~~~~~~t~vvvlTh~~~~D~~~L~~aL~~~~~~YIG 302 (386)
T 2we8_A 264 AEAGAIDARTVVCVLTHDPKFDVPLLEVALRLPDIAYIG 302 (386)
T ss_dssp HHHTCCCTTCEEEECCCCHHHHHHHHHHHTTSSCCSEEE
T ss_pred ccccCCCCCcEEEEEECChHhHHHHHHHHhcCCCCCEEE
Confidence 1 16678888888899888999998888887344343
No 383
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=97.17 E-value=0.00093 Score=57.83 Aligned_cols=87 Identities=17% Similarity=0.145 Sum_probs=51.5
Q ss_pred CEEEEEcccHHHHHHHHHHccC-CCeEEEE-cCCCCChh-HHH--------------------hhCCeecCCHHhhcccC
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPF-NCNLLYH-DRVKMDPQ-LEK--------------------ETGAKFEEDLDTMLPKC 93 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~-G~~V~~~-d~~~~~~~-~~~--------------------~~g~~~~~~l~e~l~~a 93 (223)
.+|||+|+|.||+.+++.+... +++|.++ |+++.... .++ ..++....+.++++.++
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~~~~~~v 82 (343)
T 2yyy_A 3 AKVLINGYGSIGKRVADAVSMQDDMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPVEGTILDIIEDA 82 (343)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCCCBGGGTGGGC
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEECCchHHhccCC
Confidence 3899999999999999998765 5786644 43221111 011 11111112345566789
Q ss_pred CEEEEcCCCChhhhhcccHHH-HhcCCCCcEEEEcC
Q 027408 94 DIVVVNTPLTEKTRGMFDKDR-IAKMKKGVLIVNNA 128 (223)
Q Consensus 94 DvVv~~~p~~~~t~~~i~~~~-~~~mk~ga~ivn~s 128 (223)
|+|+.|+|..... +.. -..++.|+.+|..+
T Consensus 83 DiV~eatg~~~s~-----~~a~~~~l~aG~~VI~sa 113 (343)
T 2yyy_A 83 DIVVDGAPKKIGK-----QNLENIYKPHKVKAILQG 113 (343)
T ss_dssp SEEEECCCTTHHH-----HHHHHTTTTTTCEEEECT
T ss_pred CEEEECCCccccH-----HHHHHHHHHCCCEEEECC
Confidence 9999999833211 112 25677777666543
No 384
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=97.17 E-value=0.00052 Score=58.54 Aligned_cols=92 Identities=15% Similarity=0.177 Sum_probs=57.2
Q ss_pred CEEEEEcccHHHHHHHHHHccCC--CeEEEEcCCCCChh-HHHhh--------CCeecCCHHhhcccCCEEEEcCCCChh
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFN--CNLLYHDRVKMDPQ-LEKET--------GAKFEEDLDTMLPKCDIVVVNTPLTEK 105 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G--~~V~~~d~~~~~~~-~~~~~--------g~~~~~~l~e~l~~aDvVv~~~p~~~~ 105 (223)
+||+|||.|.+|.+++..+...+ .++..+|......+ .+.++ .+....+..+.+++||+|+++.+....
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~~~~~a~~~aD~Vii~ag~~~~ 80 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAGSYGDLEGARAVVLAAGVAQR 80 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTEEEEEECCCCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEECCHHHhCCCCEEEECCCCCCC
Confidence 58999999999999999997665 47999998642111 11111 111111235678999999998764321
Q ss_pred -----------hhhcccHH---HHhcCCCCcEEEEcCC
Q 027408 106 -----------TRGMFDKD---RIAKMKKGVLIVNNAR 129 (223)
Q Consensus 106 -----------t~~~i~~~---~~~~mk~ga~ivn~sr 129 (223)
+..++ .+ .+....|++.+++++.
T Consensus 81 ~g~~r~dl~~~n~~i~-~~i~~~i~~~~p~a~iiv~tN 117 (310)
T 2xxj_A 81 PGETRLQLLDRNAQVF-AQVVPRVLEAAPEAVLLVATN 117 (310)
T ss_dssp TTCCHHHHHHHHHHHH-HHHHHHHHHHCTTCEEEECSS
T ss_pred CCcCHHHHHHhhHHHH-HHHHHHHHHHCCCcEEEEecC
Confidence 01111 11 2222368899999854
No 385
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=97.16 E-value=0.00042 Score=59.05 Aligned_cols=89 Identities=20% Similarity=0.157 Sum_probs=62.6
Q ss_pred CCCEEEEEcc-cHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeec------CCHHhhcc-----cCCEEEEcCCC
Q 027408 35 EGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE------EDLDTMLP-----KCDIVVVNTPL 102 (223)
Q Consensus 35 ~g~~igIiG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~------~~l~e~l~-----~aDvVv~~~p~ 102 (223)
.|++|.|.|. |.||..+++.++..|++|++.+++....+..+++|.... .++.+.+. ..|+|+.++..
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 224 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGG 224 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSCH
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhCCCCeEEEECCCh
Confidence 5899999998 999999999999999999999986543444455554211 23333332 36888877761
Q ss_pred ChhhhhcccHHHHhcCCCCcEEEEcCC
Q 027408 103 TEKTRGMFDKDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 103 ~~~t~~~i~~~~~~~mk~ga~ivn~sr 129 (223)
. .....++.++++..++.++.
T Consensus 225 --~----~~~~~~~~l~~~G~~v~~g~ 245 (333)
T 1v3u_A 225 --E----FLNTVLSQMKDFGKIAICGA 245 (333)
T ss_dssp --H----HHHHHHTTEEEEEEEEECCC
T ss_pred --H----HHHHHHHHHhcCCEEEEEec
Confidence 1 12566778888888887764
No 386
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=97.16 E-value=0.002 Score=55.67 Aligned_cols=89 Identities=17% Similarity=0.083 Sum_probs=54.2
Q ss_pred CEEEEEc-ccHHHHHHHHHHccCC-CeEEEEcCCC-CChhHHHh---h-C--CeecCCHHhhcccCCEEEEcCCCChhhh
Q 027408 37 KTVGTVG-CGRIGKLLLQRLKPFN-CNLLYHDRVK-MDPQLEKE---T-G--AKFEEDLDTMLPKCDIVVVNTPLTEKTR 107 (223)
Q Consensus 37 ~~igIiG-~G~iG~~iA~~l~~~G-~~V~~~d~~~-~~~~~~~~---~-g--~~~~~~l~e~l~~aDvVv~~~p~~~~t~ 107 (223)
.+|+|+| .|.||+.+++.|.... +++.++.... ...+.... + + -..+.++++ +.++|+|++|+|......
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~~~~-~~~vDvV~~a~g~~~s~~ 83 (345)
T 2ozp_A 5 KTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPPEK-LEPADILVLALPHGVFAR 83 (345)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBCBCGGG-CCCCSEEEECCCTTHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCcccccccchhH-hcCCCEEEEcCCcHHHHH
Confidence 5899999 7999999999997664 4766655432 11111110 1 1 011234444 578999999999443221
Q ss_pred hcccHHHHhcCCCCcEEEEcCCCC
Q 027408 108 GMFDKDRIAKMKKGVLIVNNARGA 131 (223)
Q Consensus 108 ~~i~~~~~~~mk~ga~ivn~srg~ 131 (223)
. .-..++.|+.+|+.|...
T Consensus 84 -~----a~~~~~aG~~VId~Sa~~ 102 (345)
T 2ozp_A 84 -E----FDRYSALAPVLVDLSADF 102 (345)
T ss_dssp -T----HHHHHTTCSEEEECSSTT
T ss_pred -H----HHHHHHCCCEEEEcCccc
Confidence 1 112346788899988643
No 387
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=97.16 E-value=0.0018 Score=51.06 Aligned_cols=93 Identities=14% Similarity=0.122 Sum_probs=58.4
Q ss_pred CEEEEEc-ccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeec-CCH----HhhcccCCEEEEcCCCChhhhh--
Q 027408 37 KTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-EDL----DTMLPKCDIVVVNTPLTEKTRG-- 108 (223)
Q Consensus 37 ~~igIiG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-~~l----~e~l~~aDvVv~~~p~~~~t~~-- 108 (223)
|+|.|.| .|.||+.+++.|...|.+|++++|++...+... .++..+ .++ .+.+..+|+|+.+.........
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~~~ 79 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-KDINILQKDIFDLTLSDLSDQNVVVDAYGISPDEAEKH 79 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-SSSEEEECCGGGCCHHHHTTCSEEEECCCSSTTTTTSH
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-CCCeEEeccccChhhhhhcCCCEEEECCcCCccccchH
Confidence 5799999 599999999999999999999999752221111 222211 111 1677889999988865332211
Q ss_pred -cccHHHHhcCCC--CcEEEEcCCC
Q 027408 109 -MFDKDRIAKMKK--GVLIVNNARG 130 (223)
Q Consensus 109 -~i~~~~~~~mk~--ga~ivn~srg 130 (223)
......++.+++ ...+|.+|..
T Consensus 80 ~~~~~~l~~a~~~~~~~~~v~~SS~ 104 (221)
T 3ew7_A 80 VTSLDHLISVLNGTVSPRLLVVGGA 104 (221)
T ss_dssp HHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred HHHHHHHHHHHHhcCCceEEEEecc
Confidence 112445555554 3566766653
No 388
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=97.15 E-value=0.00084 Score=60.23 Aligned_cols=72 Identities=18% Similarity=0.185 Sum_probs=50.3
Q ss_pred cCCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHH---hhCCeec--CCHHhhcccCCEEEEcCCCChh
Q 027408 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEK---ETGAKFE--EDLDTMLPKCDIVVVNTPLTEK 105 (223)
Q Consensus 32 ~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~---~~g~~~~--~~l~e~l~~aDvVv~~~p~~~~ 105 (223)
.+++|++|.|||.|.+|..-++.|...|++|.++++... .+... ..++... .--++.+.++|+|+.++ ..+.
T Consensus 8 ~~l~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~~-~~~~~l~~~~~i~~~~~~~~~~~l~~~~lVi~at-~~~~ 84 (457)
T 1pjq_A 8 CQLRDRDCLIVGGGDVAERKARLLLEAGARLTVNALTFI-PQFTVWANEGMLTLVEGPFDETLLDSCWLAIAAT-DDDT 84 (457)
T ss_dssp ECCBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCC-HHHHHHHTTTSCEEEESSCCGGGGTTCSEEEECC-SCHH
T ss_pred EECCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCCC-HHHHHHHhcCCEEEEECCCCccccCCccEEEEcC-CCHH
Confidence 468999999999999999999999999999999998542 33222 1233221 11134466899887654 4443
No 389
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=97.15 E-value=0.00077 Score=55.64 Aligned_cols=65 Identities=18% Similarity=0.229 Sum_probs=48.6
Q ss_pred CCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCee----cCCHHhhcccCCEEEEcCCC
Q 027408 36 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKF----EEDLDTMLPKCDIVVVNTPL 102 (223)
Q Consensus 36 g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~----~~~l~e~l~~aDvVv~~~p~ 102 (223)
.++|.|.|.|.||+.+++.|...|++|++.+|+..........++.. ..+++ +.++|+|+.+...
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~--~~~~d~vi~~a~~ 73 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS--LDGVTHLLISTAP 73 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC--CTTCCEEEECCCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc--cCCCCEEEECCCc
Confidence 47999999999999999999999999999999764333333334432 12333 7789999888764
No 390
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=97.14 E-value=0.0005 Score=59.34 Aligned_cols=90 Identities=12% Similarity=0.107 Sum_probs=64.9
Q ss_pred CCCEEEEEcccHHHHHH-HHHH-ccCCCe-EEEEcCCCC---ChhHHHhhCCeec----CCHHh---hcccCCEEEEcCC
Q 027408 35 EGKTVGTVGCGRIGKLL-LQRL-KPFNCN-LLYHDRVKM---DPQLEKETGAKFE----EDLDT---MLPKCDIVVVNTP 101 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~i-A~~l-~~~G~~-V~~~d~~~~---~~~~~~~~g~~~~----~~l~e---~l~~aDvVv~~~p 101 (223)
.+.+|.|+|.|.+|... ++.+ +.+|++ |++.++++. ..+.++++|+..+ .++.+ +-...|+|+-++.
T Consensus 172 ~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~i~~~~gg~Dvvid~~g 251 (357)
T 2b5w_A 172 DPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYVDSRQTPVEDVPDVYEQMDFIYEATG 251 (357)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEEETTTSCGGGHHHHSCCEEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCcccCCCccCHHHHHHhCCCCCEEEECCC
Confidence 44899999999999999 9999 999998 999998776 5677777887543 12222 1014788888876
Q ss_pred CChhhhhcccHHHHhcCCCCcEEEEcCC
Q 027408 102 LTEKTRGMFDKDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 102 ~~~~t~~~i~~~~~~~mk~ga~ivn~sr 129 (223)
. +. .....++.++++..++.++.
T Consensus 252 ~-~~----~~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 252 F-PK----HAIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp C-HH----HHHHHHHHEEEEEEEEECCC
T ss_pred C-hH----HHHHHHHHHhcCCEEEEEeC
Confidence 2 11 12566777888888887764
No 391
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=97.14 E-value=0.00043 Score=59.47 Aligned_cols=89 Identities=24% Similarity=0.276 Sum_probs=63.1
Q ss_pred CCCEEEEE-cccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeec----CCHHhhc-----ccCCEEEEcCCCCh
Q 027408 35 EGKTVGTV-GCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE----EDLDTML-----PKCDIVVVNTPLTE 104 (223)
Q Consensus 35 ~g~~igIi-G~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~----~~l~e~l-----~~aDvVv~~~p~~~ 104 (223)
.|++|.|+ |.|.+|...++.++..|++|++.++++...+.++++|...+ +++.+.+ ...|+|+-++..
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~g~Dvv~d~~g~-- 227 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYVFCTFNT-- 227 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSEEECTTSCHHHHHHHHTCCCEEEEEESSCH--
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEECCccHHHHHHHhCCCCccEEEECCCc--
Confidence 68999999 69999999999999999999999987655566667775422 1222222 247888877761
Q ss_pred hhhhcccHHHHhcCCCCcEEEEcC
Q 027408 105 KTRGMFDKDRIAKMKKGVLIVNNA 128 (223)
Q Consensus 105 ~t~~~i~~~~~~~mk~ga~ivn~s 128 (223)
.......++.++++..+|.++
T Consensus 228 ---~~~~~~~~~~l~~~G~iv~~~ 248 (346)
T 3fbg_A 228 ---DMYYDDMIQLVKPRGHIATIV 248 (346)
T ss_dssp ---HHHHHHHHHHEEEEEEEEESS
T ss_pred ---hHHHHHHHHHhccCCEEEEEC
Confidence 112245667778887777664
No 392
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=97.13 E-value=0.00076 Score=58.78 Aligned_cols=66 Identities=23% Similarity=0.341 Sum_probs=47.0
Q ss_pred CCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhH--HHhhCCeec---CCHHhhcccCCEEEE
Q 027408 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQL--EKETGAKFE---EDLDTMLPKCDIVVV 98 (223)
Q Consensus 33 ~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~--~~~~g~~~~---~~l~e~l~~aDvVv~ 98 (223)
.+.+++|+|+|.|.+|+.+++.++.+|++|+++|+++..... +...-.... ..+.++++++|+|+.
T Consensus 9 ~~~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~~~~~dvi~~ 79 (377)
T 3orq_A 9 LKFGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYVAHEFIQAKYDDEKALNQLGQKCDVITY 79 (377)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCTTGGGSSEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCChhhhhCCEEEECCCCCHHHHHHHHHhCCccee
Confidence 468999999999999999999999999999999986533211 111000011 235566778998865
No 393
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=97.13 E-value=0.00031 Score=62.99 Aligned_cols=67 Identities=19% Similarity=0.221 Sum_probs=46.3
Q ss_pred CCEEEEEcccHH-HHHHHHHHcc----C-CCeEEEEcCCC--CChhH----HH----hhC----CeecCCHHhhcccCCE
Q 027408 36 GKTVGTVGCGRI-GKLLLQRLKP----F-NCNLLYHDRVK--MDPQL----EK----ETG----AKFEEDLDTMLPKCDI 95 (223)
Q Consensus 36 g~~igIiG~G~i-G~~iA~~l~~----~-G~~V~~~d~~~--~~~~~----~~----~~g----~~~~~~l~e~l~~aDv 95 (223)
.+||+|||.|.+ |..++..|.. + +.+|..||+.+ ...+. .. ..+ +....++++.+++||+
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~eal~gAD~ 86 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGADF 86 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHHHHHHHHhhcCCCcEEEEeCCHHHHhCCCCE
Confidence 368999999999 8877666544 3 45799999965 32111 11 111 2233678889999999
Q ss_pred EEEcCCC
Q 027408 96 VVVNTPL 102 (223)
Q Consensus 96 Vv~~~p~ 102 (223)
|++++|.
T Consensus 87 VVitagv 93 (450)
T 1s6y_A 87 VTTQFRV 93 (450)
T ss_dssp EEECCCT
T ss_pred EEEcCCC
Confidence 9999984
No 394
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=97.13 E-value=0.00046 Score=57.88 Aligned_cols=89 Identities=20% Similarity=0.215 Sum_probs=55.6
Q ss_pred CEEEEEcc-cHHHHHHHHHHc-cCCCeEE-EEcCCCCC---hhHHH-----hhCCeecCCHHhhcccCCEEEEcCCCChh
Q 027408 37 KTVGTVGC-GRIGKLLLQRLK-PFNCNLL-YHDRVKMD---PQLEK-----ETGAKFEEDLDTMLPKCDIVVVNTPLTEK 105 (223)
Q Consensus 37 ~~igIiG~-G~iG~~iA~~l~-~~G~~V~-~~d~~~~~---~~~~~-----~~g~~~~~~l~e~l~~aDvVv~~~p~~~~ 105 (223)
++|+|+|+ |.||+.+++.+. .-|+++. ++|++... .+... ..++...+++++++.++|+|+-+++ |+
T Consensus 6 mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~~~DvVIDft~--p~ 83 (273)
T 1dih_A 6 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTR--PE 83 (273)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECSC--HH
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhcCCCEEEEcCC--hH
Confidence 58999998 999999999876 5578865 77875421 01111 1234445678888889999995554 33
Q ss_pred hhhcccHHHHhcCCCCcEEEEcCCC
Q 027408 106 TRGMFDKDRIAKMKKGVLIVNNARG 130 (223)
Q Consensus 106 t~~~i~~~~~~~mk~ga~ivn~srg 130 (223)
.. .+.....++.|.-+|-.+.|
T Consensus 84 ~~---~~~~~~a~~~G~~vVigTtG 105 (273)
T 1dih_A 84 GT---LNHLAFCRQHGKGMVIGTTG 105 (273)
T ss_dssp HH---HHHHHHHHHTTCEEEECCCC
T ss_pred HH---HHHHHHHHhCCCCEEEECCC
Confidence 21 12223334456556654445
No 395
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=97.13 E-value=0.0023 Score=56.77 Aligned_cols=109 Identities=15% Similarity=0.270 Sum_probs=73.5
Q ss_pred ccCCCCCEEEEEcccHHHHHHHHHHccCCCeEE-EEcCC-------CCChhHHHhh----C------CeecCCHHhhc-c
Q 027408 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLL-YHDRV-------KMDPQLEKET----G------AKFEEDLDTML-P 91 (223)
Q Consensus 31 ~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~-~~d~~-------~~~~~~~~~~----g------~~~~~~l~e~l-~ 91 (223)
+.++.|+||.|.|+|++|+..|+.|...|.+|+ +.|.+ ....+...++ + .+.+ +.++++ .
T Consensus 216 g~~l~g~~vaVqG~GnVG~~aa~~l~e~GakVVavsD~~G~iyd~~GlD~~~l~~~~~~~g~i~~~~a~~~-~~~~i~~~ 294 (424)
T 3k92_A 216 GIKLQNARIIIQGFGNAGSFLAKFMHDAGAKVIGISDANGGLYNPDGLDIPYLLDKRDSFGMVTNLFTDVI-TNEELLEK 294 (424)
T ss_dssp TCCGGGCEEEEECCSHHHHHHHHHHHHHTCEEEEEECSSCEEECTTCCCHHHHHHHCCSSSCCGGGCSCCB-CHHHHHHS
T ss_pred CCCcccCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHhCCCCCCCcEEe-cCccceec
Confidence 457999999999999999999999999999975 55554 1112222211 1 2222 455655 4
Q ss_pred cCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCcc
Q 027408 92 KCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (223)
Q Consensus 92 ~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~ 148 (223)
+||+++-|.. .+.|+.+....++ -.+|+-.+.+.+ ..+ ..+.|.+..|.
T Consensus 295 ~~DIliPcA~-----~n~I~~~~a~~l~-ak~V~EgAN~p~-t~e-A~~iL~~rGI~ 343 (424)
T 3k92_A 295 DCDILVPAAI-----SNQITAKNAHNIQ-ASIVVERANGPT-TID-ATKILNERGVL 343 (424)
T ss_dssp CCSEEEECSC-----SSCBCTTTGGGCC-CSEEECCSSSCB-CHH-HHHHHHHTTCE
T ss_pred cccEEeecCc-----ccccChhhHhhcC-ceEEEcCCCCCC-CHH-HHHHHHHCCCE
Confidence 6999998887 4567777777773 456666666764 444 45667777665
No 396
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=97.13 E-value=0.00099 Score=57.37 Aligned_cols=97 Identities=13% Similarity=0.209 Sum_probs=60.4
Q ss_pred CCCCCEEEEEcccHHHHHHHHHHccCCC--eEEEEcCCCCChh-HHHhh--C--------CeecCCHHhhcccCCEEEEc
Q 027408 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQ-LEKET--G--------AKFEEDLDTMLPKCDIVVVN 99 (223)
Q Consensus 33 ~l~g~~igIiG~G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~-~~~~~--g--------~~~~~~l~e~l~~aDvVv~~ 99 (223)
....++|+|||.|.||..+|..+...|. ++..+|++....+ .+.++ . +....+.+ .+++||+|+++
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~-~~~~aDiVvi~ 94 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYS-VTANSKLVIIT 94 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGG-GGTTEEEEEEC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCHH-HhCCCCEEEEc
Confidence 4578899999999999999999877776 8999998642111 11111 1 11234555 58899999998
Q ss_pred CCCC--h-hhh-hcc--c----H---HHHhcCCCCcEEEEcCCC
Q 027408 100 TPLT--E-KTR-GMF--D----K---DRIAKMKKGVLIVNNARG 130 (223)
Q Consensus 100 ~p~~--~-~t~-~~i--~----~---~~~~~mk~ga~ivn~srg 130 (223)
.... | .++ .++ | . +.+....|++++++++..
T Consensus 95 aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtNP 138 (331)
T 4aj2_A 95 AGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNP 138 (331)
T ss_dssp CSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred cCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCh
Confidence 6421 1 111 111 1 1 122334789999999853
No 397
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=97.12 E-value=0.00054 Score=59.70 Aligned_cols=90 Identities=17% Similarity=0.211 Sum_probs=64.2
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCC-CeEEEEcCCCCChhHHHhhCCeec-C-C---HHh-------hcc--cCCEEEEc
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFN-CNLLYHDRVKMDPQLEKETGAKFE-E-D---LDT-------MLP--KCDIVVVN 99 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G-~~V~~~d~~~~~~~~~~~~g~~~~-~-~---l~e-------~l~--~aDvVv~~ 99 (223)
.|.+|.|+|.|.+|...++.++.+| .+|++.++++...+.++++|...+ + . -++ +.. ..|+|+-+
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~~g~g~Dvvid~ 274 (380)
T 1vj0_A 195 AGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEA 274 (380)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEEEC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEEEeccccCcchHHHHHHHHhCCCCCcEEEEC
Confidence 5889999999999999999999999 599999987655566677776421 1 1 111 111 47888888
Q ss_pred CCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 027408 100 TPLTEKTRGMFDKDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 100 ~p~~~~t~~~i~~~~~~~mk~ga~ivn~sr 129 (223)
+...+. ....++.++++..++.++.
T Consensus 275 ~g~~~~-----~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 275 TGDSRA-----LLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp SSCTTH-----HHHHHHHEEEEEEEEECCC
T ss_pred CCCHHH-----HHHHHHHHhcCCEEEEEec
Confidence 762221 2566777888888887764
No 398
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=97.12 E-value=0.00043 Score=62.22 Aligned_cols=69 Identities=17% Similarity=0.224 Sum_probs=49.8
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChh-HHHhhCCeec----CC---HHhh-cccCCEEEEcCCCC
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQ-LEKETGAKFE----ED---LDTM-LPKCDIVVVNTPLT 103 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~-~~~~~g~~~~----~~---l~e~-l~~aDvVv~~~p~~ 103 (223)
..|+|-|+|+|.+|+.+|+.|...|++|++.|.++...+ ....+++..+ ++ |+++ +++||+++.+++..
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~~D 79 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTNTD 79 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCSCH
T ss_pred CcCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcCCh
Confidence 367899999999999999999999999999998753332 2334454321 22 3333 57899998777643
No 399
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=97.09 E-value=0.00079 Score=57.08 Aligned_cols=105 Identities=15% Similarity=0.137 Sum_probs=67.4
Q ss_pred CCEEEEEcc-cHHHHHHHHHHccCCCe-EEEEcCCCCChhHHHhhCCeecCCHHhhcc--c-CCEEEEcCCCChhhhhcc
Q 027408 36 GKTVGTVGC-GRIGKLLLQRLKPFNCN-LLYHDRVKMDPQLEKETGAKFEEDLDTMLP--K-CDIVVVNTPLTEKTRGMF 110 (223)
Q Consensus 36 g~~igIiG~-G~iG~~iA~~l~~~G~~-V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~--~-aDvVv~~~p~~~~t~~~i 110 (223)
..++.|+|. |++|+.+++.+...|++ |..++|.....+ ..|+..+.+++++.. . .|++++++|. +...-+
T Consensus 13 ~~~vvV~Gasg~~G~~~~~~l~~~g~~~v~~VnP~~~g~~---i~G~~vy~sl~el~~~~~~~DvaIi~vp~--~~~~~~ 87 (297)
T 2yv2_A 13 ETRVLVQGITGREGSFHAKAMLEYGTKVVAGVTPGKGGSE---VHGVPVYDSVKEALAEHPEINTSIVFVPA--PFAPDA 87 (297)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCE---ETTEEEESSHHHHHHHCTTCCEEEECCCG--GGHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHhCCCcEEEEeCCCCCCce---ECCEeeeCCHHHHhhcCCCCCEEEEecCH--HHHHHH
Confidence 345777798 99999999999888998 446665431111 257777889999986 5 9999999993 222111
Q ss_pred cHHHHhcCCCCcE-EEEcCCCCc-cCHHHHHHHHHhCCcc
Q 027408 111 DKDRIAKMKKGVL-IVNNARGAI-MDTQAVVDACSSGHIA 148 (223)
Q Consensus 111 ~~~~~~~mk~ga~-ivn~srg~~-vd~~al~~~L~~g~i~ 148 (223)
-++..+ .|.. +|..+.|-. -+++.|.++.++..+.
T Consensus 88 v~ea~~---~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~ 124 (297)
T 2yv2_A 88 VYEAVD---AGIRLVVVITEGIPVHDTMRFVNYARQKGAT 124 (297)
T ss_dssp HHHHHH---TTCSEEEECCCCCCHHHHHHHHHHHHHHTCE
T ss_pred HHHHHH---CCCCEEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 233333 3333 455555532 2456788888776664
No 400
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=97.09 E-value=0.0056 Score=53.17 Aligned_cols=94 Identities=13% Similarity=0.119 Sum_probs=67.6
Q ss_pred CCCCE--EEEEcc---c--HHHHHHHHHHccCCCeEEEEcCC-C-CCh-hHH-------HhhC--CeecCCHHhhcccCC
Q 027408 34 LEGKT--VGTVGC---G--RIGKLLLQRLKPFNCNLLYHDRV-K-MDP-QLE-------KETG--AKFEEDLDTMLPKCD 94 (223)
Q Consensus 34 l~g~~--igIiG~---G--~iG~~iA~~l~~~G~~V~~~d~~-~-~~~-~~~-------~~~g--~~~~~~l~e~l~~aD 94 (223)
|.|++ |+++|- | ++.++++..+..+|++|.+..|. . ... +.. +..| +....+++++++++|
T Consensus 188 l~glkvvva~vGDl~~~~nrva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~eav~~aD 267 (359)
T 1zq6_A 188 LRGKKYVLTWTYHPKPLNTAVANSALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVAESGGSLQVSHDIDSAYAGAD 267 (359)
T ss_dssp CTTCEEEEEECCCSSCCCSHHHHHHHHHHHHTTCEEEEECSSGGGCCCHHHHHHHHHHHHHHSCEEEEECCHHHHHTTCS
T ss_pred ccCCeeEEEEEecccccccchHHHHHHHHHHcCCEEEEEcCccccCCCHHHHHHHHHHHHHcCCeEEEECCHHHHhcCCC
Confidence 89999 999995 5 99999999999999999999986 3 222 221 1334 345679999999999
Q ss_pred EEEEcCCCC-----h-----h-----hhhcccHHHHhcCCCCcEEEEcC
Q 027408 95 IVVVNTPLT-----E-----K-----TRGMFDKDRIAKMKKGVLIVNNA 128 (223)
Q Consensus 95 vVv~~~p~~-----~-----~-----t~~~i~~~~~~~mk~ga~ivn~s 128 (223)
+|....=.. + + ....++.+.++.+| +++|..+.
T Consensus 268 vVyt~~w~se~~mg~~~~~~~~~~~~~~y~vt~e~l~~a~-~ai~MHcL 315 (359)
T 1zq6_A 268 VVYAKSWGALPFFGNWEPEKPIRDQYQHFIVDERKMALTN-NGVFSHCL 315 (359)
T ss_dssp EEEEECCCCGGGTTCCTTHHHHHGGGGGGSBCHHHHHTSS-SCEEECCS
T ss_pred EEEECCccccccCCcchhhHHHHHHhcCCCCCHHHHHhCC-CCEEECCC
Confidence 998765211 1 0 12346777777777 77776653
No 401
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=97.09 E-value=0.001 Score=59.03 Aligned_cols=90 Identities=16% Similarity=0.060 Sum_probs=66.6
Q ss_pred CCCCEEEEEcc-cHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCH------------------------Hh
Q 027408 34 LEGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDL------------------------DT 88 (223)
Q Consensus 34 l~g~~igIiG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l------------------------~e 88 (223)
-.|++|.|+|. |.||...++.++..|++|++.+++....+.++++|...+-+. ++
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKL 298 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHH
Confidence 36899999998 999999999999999999988876655566667776422111 11
Q ss_pred ---hc-ccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 027408 89 ---ML-PKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 89 ---~l-~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~sr 129 (223)
+. ...|+|+-++.. . .....+..++++..+++++.
T Consensus 299 v~~~~g~g~Dvvid~~G~--~----~~~~~~~~l~~~G~iv~~G~ 337 (447)
T 4a0s_A 299 VVEKAGREPDIVFEHTGR--V----TFGLSVIVARRGGTVVTCGS 337 (447)
T ss_dssp HHHHHSSCCSEEEECSCH--H----HHHHHHHHSCTTCEEEESCC
T ss_pred HHHHhCCCceEEEECCCc--h----HHHHHHHHHhcCCEEEEEec
Confidence 11 258999988872 1 22667788999999999874
No 402
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=97.08 E-value=0.00037 Score=59.77 Aligned_cols=89 Identities=16% Similarity=0.126 Sum_probs=61.3
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCC-eEEEEcCCCCChhHHHhhCCee-c----CCHHhhcc-----cCCEEEEcCCCC
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKF-E----EDLDTMLP-----KCDIVVVNTPLT 103 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~-~----~~l~e~l~-----~aDvVv~~~p~~ 103 (223)
.|.+|.|+|.|.+|...++.++.+|+ +|++.++++...+.++++ ... + .++.+.+. ..|+|+.++...
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~~~~~~~~~~~~~~g~D~vid~~g~~ 242 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSGNE 242 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTTTSCHHHHHHHHHSSCEEEEEECSCCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcCccCHHHHHHHhcCCCCCEEEECCCCH
Confidence 78999999999999999999999999 899999865333334333 321 1 12333322 478888887621
Q ss_pred hhhhhcccHHHHhcCCCCcEEEEcCC
Q 027408 104 EKTRGMFDKDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 104 ~~t~~~i~~~~~~~mk~ga~ivn~sr 129 (223)
+. ....++.++++..++.++.
T Consensus 243 ~~-----~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 243 AA-----IHQGLMALIPGGEARILGI 263 (343)
T ss_dssp HH-----HHHHHHHEEEEEEEEECCC
T ss_pred HH-----HHHHHHHHhcCCEEEEEec
Confidence 11 2566777788878887764
No 403
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=97.08 E-value=0.00059 Score=58.73 Aligned_cols=111 Identities=17% Similarity=0.174 Sum_probs=66.9
Q ss_pred CEEEEEcccHHHHHHHHHHccC--------CCeE-EEEcCCCCChhH-------HH---hhCCe-ecC---CHHhhc-cc
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPF--------NCNL-LYHDRVKMDPQL-------EK---ETGAK-FEE---DLDTML-PK 92 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~--------G~~V-~~~d~~~~~~~~-------~~---~~g~~-~~~---~l~e~l-~~ 92 (223)
.+|||||+|.||+.+++.+... +++| .++|++...... .. ..++. ..+ ++++++ .+
T Consensus 7 irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ll~~~ 86 (331)
T 3c8m_A 7 INLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEKGSLDSLEYESISASEALARD 86 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHTTCGGGCCSEECCHHHHHHSS
T ss_pred EeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhccCCcccccCCCCCHHHHhCCC
Confidence 4799999999999999988653 3565 467776421110 11 11221 233 788887 35
Q ss_pred CCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCc-cCHHHHHHHHHhCCcc
Q 027408 93 CDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAI-MDTQAVVDACSSGHIA 148 (223)
Q Consensus 93 aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~-vd~~al~~~L~~g~i~ 148 (223)
.|+|+.|+|.. .+....-+-..+.++.|..+|......+ .+-+.|.++.++....
T Consensus 87 iDvVv~~t~~~-~~~~~~~~~~~~AL~aGkhVvtanK~pla~~~~eL~~~A~~~gv~ 142 (331)
T 3c8m_A 87 FDIVVDATPAS-ADGKKELAFYKETFENGKDVVTANKSGLANFWPEIMEYARSNNRR 142 (331)
T ss_dssp CSEEEECSCCC-SSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTCC
T ss_pred CCEEEECCCCC-CccchHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHHcCCE
Confidence 89999999964 1111222344566778888887654443 2334566655555443
No 404
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=97.08 E-value=0.00083 Score=57.61 Aligned_cols=65 Identities=25% Similarity=0.352 Sum_probs=46.7
Q ss_pred CCEEEEEc-ccHHHHHHHHHHccCC--CeEEEEcCCCCChhHH---HhhC----Cee---cCCHHhhcccCCEEEEcCC
Q 027408 36 GKTVGTVG-CGRIGKLLLQRLKPFN--CNLLYHDRVKMDPQLE---KETG----AKF---EEDLDTMLPKCDIVVVNTP 101 (223)
Q Consensus 36 g~~igIiG-~G~iG~~iA~~l~~~G--~~V~~~d~~~~~~~~~---~~~g----~~~---~~~l~e~l~~aDvVv~~~p 101 (223)
.++|+|+| .|.+|..++..|...| .+|..+|+.+. .... .... +.. .+++++.++++|+|+++.+
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~-~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~ag 85 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA-PGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAG 85 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH-HHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc-HhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcCC
Confidence 46899999 8999999999998777 68999997653 1111 1111 111 1256788999999999976
No 405
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=97.08 E-value=0.00055 Score=53.38 Aligned_cols=67 Identities=19% Similarity=0.136 Sum_probs=47.8
Q ss_pred CCEEEEEcc-cHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCe-------ecCCHHhhcccCCEEEEcCCC
Q 027408 36 GKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAK-------FEEDLDTMLPKCDIVVVNTPL 102 (223)
Q Consensus 36 g~~igIiG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~-------~~~~l~e~l~~aDvVv~~~p~ 102 (223)
+++|.|.|. |.||+.+++.|...|.+|++++|++...+.....++. ..+++.++++++|+|+.+...
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~ 77 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGT 77 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccC
Confidence 479999997 9999999999999999999999875221111011221 112455678889999988764
No 406
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=97.08 E-value=0.00065 Score=58.80 Aligned_cols=68 Identities=21% Similarity=0.288 Sum_probs=49.3
Q ss_pred CCCCEEEEEcc-cHHHHHHHHHHccCCC--eEEEEcCCCCChh-----HHHh----hCCeecCCHHhhcccCCEEEEcCC
Q 027408 34 LEGKTVGTVGC-GRIGKLLLQRLKPFNC--NLLYHDRVKMDPQ-----LEKE----TGAKFEEDLDTMLPKCDIVVVNTP 101 (223)
Q Consensus 34 l~g~~igIiG~-G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~-----~~~~----~g~~~~~~l~e~l~~aDvVv~~~p 101 (223)
+.++||+|||. |.+|..+|..+..+|. +|..+|......+ +... ..+....++.+.+++||+|+++..
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~dADvVvitaG 85 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTDAKYIVSSGG 85 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTTEEEEEECCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCCCCEEEEccC
Confidence 46789999998 9999999998887774 7999998642111 1111 123334678888999999999863
No 407
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=97.06 E-value=0.00048 Score=58.75 Aligned_cols=90 Identities=20% Similarity=0.144 Sum_probs=64.8
Q ss_pred CCCEEEEEcc-cHHHHHHHHHHccCCCeEEEEcCCCCChhHH-HhhCCeec-----CCHHhhc-----ccCCEEEEcCCC
Q 027408 35 EGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLE-KETGAKFE-----EDLDTML-----PKCDIVVVNTPL 102 (223)
Q Consensus 35 ~g~~igIiG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~-~~~g~~~~-----~~l~e~l-----~~aDvVv~~~p~ 102 (223)
.|++|.|+|. |.||..+++.++..|++|++.++++...+.+ +++|.... .++.+.+ ...|+|+.++..
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 228 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDNVGG 228 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEEEEEESSCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCceEEEECCCc
Confidence 6899999998 9999999999999999999999876444555 56665321 1222222 247888887761
Q ss_pred ChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 027408 103 TEKTRGMFDKDRIAKMKKGVLIVNNARG 130 (223)
Q Consensus 103 ~~~t~~~i~~~~~~~mk~ga~ivn~srg 130 (223)
. .....++.++++..++.++..
T Consensus 229 --~----~~~~~~~~l~~~G~iv~~G~~ 250 (336)
T 4b7c_A 229 --E----ILDTVLTRIAFKARIVLCGAI 250 (336)
T ss_dssp --H----HHHHHHTTEEEEEEEEECCCG
T ss_pred --c----hHHHHHHHHhhCCEEEEEeec
Confidence 1 236677888888888888643
No 408
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=97.06 E-value=0.0015 Score=56.79 Aligned_cols=88 Identities=20% Similarity=0.275 Sum_probs=53.4
Q ss_pred CEEEEEcccHHHHHHHHHHccC-CCeEEEEcC-CCCChhHHH------hhC-------------------Ceec--CCHH
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPF-NCNLLYHDR-VKMDPQLEK------ETG-------------------AKFE--EDLD 87 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~-G~~V~~~d~-~~~~~~~~~------~~g-------------------~~~~--~~l~ 87 (223)
.+|||+|+|.||+.+.+.|... .++|.+.+- .......+. .+| +..+ .+++
T Consensus 18 ikVgI~G~G~iGr~llR~l~~~p~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v~g~~i~v~~~~dp~ 97 (354)
T 3cps_A 18 GTLGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCINGKVVKVFQAKDPA 97 (354)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-CEEETTEEEEEECCSCGG
T ss_pred eEEEEECCCHHHHHHHHHHHcCCCeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEeCCEEEECCeEEEEEecCChH
Confidence 4899999999999999998765 678776653 321110001 000 1111 1444
Q ss_pred hhc---ccCCEEEEcCCCChhhhhcccHHHHhcCCCCc--EEEEcCC
Q 027408 88 TML---PKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGV--LIVNNAR 129 (223)
Q Consensus 88 e~l---~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga--~ivn~sr 129 (223)
++. .++|+|+.|+|.... -+..-..++.|+ +||+.+.
T Consensus 98 ~i~w~~~~vDvV~eatg~~~s-----~e~a~~~l~~GakkvVId~pa 139 (354)
T 3cps_A 98 EIPWGASGAQIVCESTGVFTT-----EEKASLHLKGGAKKVIISAPP 139 (354)
T ss_dssp GCCHHHHTCCEEEECSSSCCS-----HHHHGGGGTTTCSEEEESSCC
T ss_pred HCCcccCCCCEEEECCCchhh-----HHHHHHHHHcCCcEEEEeCCC
Confidence 432 479999999993221 133345567788 8888764
No 409
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=97.04 E-value=0.0015 Score=57.90 Aligned_cols=67 Identities=16% Similarity=0.289 Sum_probs=52.7
Q ss_pred CCCCEEEEEc-----cc---HHHHHHHHHHccCCCeEEEEcCCCC--ChhHH-------HhhCC--eecCCHHhhcccCC
Q 027408 34 LEGKTVGTVG-----CG---RIGKLLLQRLKPFNCNLLYHDRVKM--DPQLE-------KETGA--KFEEDLDTMLPKCD 94 (223)
Q Consensus 34 l~g~~igIiG-----~G---~iG~~iA~~l~~~G~~V~~~d~~~~--~~~~~-------~~~g~--~~~~~l~e~l~~aD 94 (223)
|.|++|+||| +| ++.++++..+..+|++|.+..|... .++.. ++.|. ....+++++++++|
T Consensus 186 l~Glkva~vgd~~~s~Gd~nnVa~Sli~~l~~lG~~v~l~~P~~~~~~p~~~~~a~~~a~~~G~~v~~~~d~~eav~~AD 265 (418)
T 2yfk_A 186 LKGKKVAMTWAYSPSYGKPLSVPQGIVGLMTRLGMDVVLAHPEGYEIMPEVEEVAKKNAAEFGGNFTKTNSMAEAFKDAD 265 (418)
T ss_dssp GTTCEEEEECCCCSSSCCCSHHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHSSEEEEESCHHHHHTTCS
T ss_pred cCCCEEEEEeccccccCccchHHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCEEEEEcCHHHHhcCCC
Confidence 7899999997 34 4999999999999999999998642 33322 23453 55689999999999
Q ss_pred EEEEcC
Q 027408 95 IVVVNT 100 (223)
Q Consensus 95 vVv~~~ 100 (223)
+|...+
T Consensus 266 VVytd~ 271 (418)
T 2yfk_A 266 VVYPKS 271 (418)
T ss_dssp EEEECC
T ss_pred EEEEcc
Confidence 998854
No 410
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=97.04 E-value=0.00064 Score=58.57 Aligned_cols=89 Identities=21% Similarity=0.216 Sum_probs=65.4
Q ss_pred CCCEEEEE-cccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeec-----CCHHhhc-----ccCCEEEEcCCCC
Q 027408 35 EGKTVGTV-GCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLDTML-----PKCDIVVVNTPLT 103 (223)
Q Consensus 35 ~g~~igIi-G~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~e~l-----~~aDvVv~~~p~~ 103 (223)
.|++|.|+ |.|.||..+++.++..|++|++.++++...+.++++|.... .++.+.+ ...|+|+.++..
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~- 245 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMIGA- 245 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEEEEESCCG-
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceEEEECCCH-
Confidence 68999999 68999999999999999999999987655566666665321 1233322 247888888762
Q ss_pred hhhhhcccHHHHhcCCCCcEEEEcCC
Q 027408 104 EKTRGMFDKDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 104 ~~t~~~i~~~~~~~mk~ga~ivn~sr 129 (223)
+ .....+..++++..++.++.
T Consensus 246 ~-----~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 246 A-----YFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp G-----GHHHHHHTEEEEEEEEECCC
T ss_pred H-----HHHHHHHHhccCCEEEEEEe
Confidence 1 23567788888888888764
No 411
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=97.04 E-value=0.0025 Score=52.50 Aligned_cols=74 Identities=18% Similarity=0.271 Sum_probs=48.2
Q ss_pred CEEEEEcc-cHHHHHHHHHHccC-CCeEE-EEcCCCCChhHHHhhCCeecCCHHhhcc-cCCEEEEcCCCChhhhhcccH
Q 027408 37 KTVGTVGC-GRIGKLLLQRLKPF-NCNLL-YHDRVKMDPQLEKETGAKFEEDLDTMLP-KCDIVVVNTPLTEKTRGMFDK 112 (223)
Q Consensus 37 ~~igIiG~-G~iG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~g~~~~~~l~e~l~-~aDvVv~~~p~~~~t~~~i~~ 112 (223)
++|+|+|+ |+||+.+++.+... ++++. ++|+. +++++++. .+|+|+-+++. +. ..+
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~---------------~dl~~~~~~~~DvvIDfT~p--~a---~~~ 60 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG---------------DPLSLLTDGNTEVVIDFTHP--DV---VMG 60 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT---------------CCTHHHHHTTCCEEEECSCT--TT---HHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC---------------CCHHHHhccCCcEEEEccCh--HH---HHH
Confidence 47999996 99999999998755 88866 56653 24555554 78999866652 21 112
Q ss_pred HHHhcCCCCcEEEEcCCC
Q 027408 113 DRIAKMKKGVLIVNNARG 130 (223)
Q Consensus 113 ~~~~~mk~ga~ivn~srg 130 (223)
-....++.|.-+|-.+.|
T Consensus 61 ~~~~a~~~g~~~VigTTG 78 (245)
T 1p9l_A 61 NLEFLIDNGIHAVVGTTG 78 (245)
T ss_dssp HHHHHHHTTCEEEECCCC
T ss_pred HHHHHHHcCCCEEEcCCC
Confidence 222334556666666666
No 412
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=97.03 E-value=0.0041 Score=55.60 Aligned_cols=111 Identities=15% Similarity=0.170 Sum_probs=68.9
Q ss_pred ccCCCCCEEEEEcccHHHHHHHHHHccCCCeEEE-Ec-------CCCC-Chh------------------HHHhhCCeec
Q 027408 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLY-HD-------RVKM-DPQ------------------LEKETGAKFE 83 (223)
Q Consensus 31 ~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~-~d-------~~~~-~~~------------------~~~~~g~~~~ 83 (223)
+.++.|++|.|.|+|++|...|+.|...|.+|++ .| +... ..+ ...+++.+.+
T Consensus 225 G~~l~g~~v~VqG~GnVG~~~a~~L~~~GakvVavsD~~G~i~dp~Gi~d~edi~~l~~~k~~~~g~v~~y~~~~~a~~i 304 (449)
T 1bgv_A 225 NDTLVGKTVALAGFGNVAWGAAKKLAELGAKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQDYADKFGVQFF 304 (449)
T ss_dssp TCCSTTCEEEECCSSHHHHHHHHHHHHHTCEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTHHHHHHHTCEEE
T ss_pred cCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEeCCceEECCCcCCCHHHHHHHHHHHhccCCChhhcccccCCEEe
Confidence 4578999999999999999999999999999774 44 3221 111 0001122322
Q ss_pred CCHHhhc-ccCCEEEEcCCCChhhhhcccHHHHhcCC-CCcEEEEcCCCCccCHHHHHHHHHhC-Ccc
Q 027408 84 EDLDTML-PKCDIVVVNTPLTEKTRGMFDKDRIAKMK-KGVLIVNNARGAIMDTQAVVDACSSG-HIA 148 (223)
Q Consensus 84 ~~l~e~l-~~aDvVv~~~p~~~~t~~~i~~~~~~~mk-~ga~ivn~srg~~vd~~al~~~L~~g-~i~ 148 (223)
+ .++++ -+||+++-|.. .+.|+.+..+.++ +|+.+|--+.-.....++- +.|.+. .+.
T Consensus 305 ~-~~e~~~~~~Dil~P~A~-----~~~I~~~na~~l~a~g~kiV~EgAN~p~T~eA~-~~l~~~~Gi~ 365 (449)
T 1bgv_A 305 P-GEKPWGQKVDIIMPCAT-----QNDVDLEQAKKIVANNVKYYIEVANMPTTNEAL-RFLMQQPNMV 365 (449)
T ss_dssp E-TCCGGGSCCSEEECCSC-----TTCBCHHHHHHHHHTTCCEEECCSSSCBCHHHH-HHHHHCTTCE
T ss_pred C-chhhhcCCcceeecccc-----ccccchhhHHHHHhcCCeEEEeCCCCcCCHHHH-HHHHHcCCEE
Confidence 1 22333 36898887764 4566677666665 3444544444444566664 666666 655
No 413
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=97.02 E-value=0.0056 Score=55.23 Aligned_cols=106 Identities=23% Similarity=0.354 Sum_probs=70.3
Q ss_pred CCCCCEEEEEcccHHHHHHHHHHccCCCeEEEE--------cCCCCChhHH----HhhC-------CeecCCHHhhc-cc
Q 027408 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYH--------DRVKMDPQLE----KETG-------AKFEEDLDTML-PK 92 (223)
Q Consensus 33 ~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~--------d~~~~~~~~~----~~~g-------~~~~~~l~e~l-~~ 92 (223)
+|.|++|.|-|+|++|+..|+.|...|.+|+++ |+.....+.. ...+ .+.+.+ +++ .+
T Consensus 241 ~l~g~tVaVQG~GNVG~~aa~~L~e~GakVVavsDs~G~iyd~~Gid~~~l~~~k~~~g~i~~~~~a~~~~~--~il~~~ 318 (501)
T 3mw9_A 241 GFGDKTFVVQGFGNVGLHSMRYLHRFGAKCITVGESDGSIWNPDGIDPKELEDFKLQHGTILGFPKAKIYEG--SILEVD 318 (501)
T ss_dssp SSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHHSSSTTCTTSEEECS--CGGGSC
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCceEECCCCCCHHHHHHHHHhcCCeecccCceeecc--cccccc
Confidence 589999999999999999999999999998753 3333222221 1112 122221 333 47
Q ss_pred CCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCcc
Q 027408 93 CDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (223)
Q Consensus 93 aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~ 148 (223)
||+.+-|.. .+.|+.+....++ -.+|+-.+.+. .+.+| .+.|.+..|.
T Consensus 319 ~DIliPcA~-----~n~I~~~na~~l~-akiV~EgAN~p-~T~eA-~~iL~~rGIl 366 (501)
T 3mw9_A 319 CDILIPAAS-----EKQLTKSNAPRVK-AKIIAEGANGP-TTPEA-DKIFLERNIM 366 (501)
T ss_dssp CSEEEECSS-----SCCBCTTTGGGCC-CSEEECCSSSC-BCHHH-HHHHHHTTCE
T ss_pred ceEEeeccc-----cCccCHhHHHHcC-ceEEEeCCCCc-CCHHH-HHHHHHCCCE
Confidence 999988876 5677777777775 34666666665 55554 4566666655
No 414
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=97.01 E-value=0.00081 Score=57.16 Aligned_cols=89 Identities=19% Similarity=0.161 Sum_probs=65.4
Q ss_pred CCCEEEEEc-ccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeec-----CCHHhhc------ccCCEEEEcCCC
Q 027408 35 EGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLDTML------PKCDIVVVNTPL 102 (223)
Q Consensus 35 ~g~~igIiG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~e~l------~~aDvVv~~~p~ 102 (223)
.|++|.|+| .|.+|...++.++..|++|++.++++...+.++++|.... .++.+.+ ...|+|+.++..
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~ 219 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQ 219 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEESSCG
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCceEEEECCCh
Confidence 589999999 7999999999999999999999987655566666765321 1222222 247888888762
Q ss_pred ChhhhhcccHHHHhcCCCCcEEEEcCC
Q 027408 103 TEKTRGMFDKDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 103 ~~~t~~~i~~~~~~~mk~ga~ivn~sr 129 (223)
-.....++.++++..++.++.
T Consensus 220 ------~~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 220 ------DTWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp ------GGHHHHHTTEEEEEEEEECCC
T ss_pred ------HHHHHHHHHhcCCCEEEEEec
Confidence 122567788888888888864
No 415
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=97.01 E-value=0.0019 Score=55.64 Aligned_cols=89 Identities=19% Similarity=0.170 Sum_probs=52.9
Q ss_pred CEEEEEcccHHHHHHHHHHcc-CCCeEEEEcCCCCChhHH----H------hhC----------------Ce--ecCCHH
Q 027408 37 KTVGTVGCGRIGKLLLQRLKP-FNCNLLYHDRVKMDPQLE----K------ETG----------------AK--FEEDLD 87 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~-~G~~V~~~d~~~~~~~~~----~------~~g----------------~~--~~~~l~ 87 (223)
.+|||+|+|+||+.+++.+.. -+++|.+++-.....+.. + .+. +. ...+++
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~~~d~~ 83 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDPS 83 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred eEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEEecCCHH
Confidence 489999999999999999865 467876554310112211 0 000 00 112555
Q ss_pred hhc---ccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 027408 88 TML---PKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARG 130 (223)
Q Consensus 88 e~l---~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg 130 (223)
++- .++|+|+.|+|.... -+..-..++.|+..|.++.+
T Consensus 84 ~l~~~~~~vDvV~eatg~~~~-----~e~a~~~l~aGak~V~iSap 124 (335)
T 1u8f_O 84 KIKWGDAGAEYVVESTGVFTT-----MEKAGAHLQGGAKRVIISAP 124 (335)
T ss_dssp GCCTTTTTCCEEEECSSSCCS-----HHHHGGGGGGTCSEEEESSC
T ss_pred HCccccCCCCEEEECCCchhh-----HHHHHHHHhCCCeEEEeccC
Confidence 652 479999999993222 23344556778666666654
No 416
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=97.00 E-value=0.00047 Score=60.41 Aligned_cols=96 Identities=13% Similarity=0.060 Sum_probs=67.1
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCC-eEEEEcCCCCChhHHHhhCCeec----CCH-Hhhc----c--cCCEEEEcCCC
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFE----EDL-DTML----P--KCDIVVVNTPL 102 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~----~~l-~e~l----~--~aDvVv~~~p~ 102 (223)
.|.+|.|+|.|.+|...++.++.+|. +|++.++++...+.++++|...+ .++ .+.+ . ..|+|+-++..
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~~~~~~~g~g~Dvvid~~g~ 264 (398)
T 2dph_A 185 PGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETIDLRNSAPLRDQIDQILGKPEVDCGVDAVGF 264 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCEEEETTSSSCHHHHHHHHHSSSCEEEEEECSCT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEcCCCcchHHHHHHHHhCCCCCCEEEECCCC
Confidence 58999999999999999999999999 89999987655566777776422 121 2222 1 47999988873
Q ss_pred Chhh---------hhcccHHHHhcCCCCcEEEEcCCC
Q 027408 103 TEKT---------RGMFDKDRIAKMKKGVLIVNNARG 130 (223)
Q Consensus 103 ~~~t---------~~~i~~~~~~~mk~ga~ivn~srg 130 (223)
.... ....-.+.++.++++..++.++..
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~ 301 (398)
T 2dph_A 265 EAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIY 301 (398)
T ss_dssp TCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCC
T ss_pred ccccccccccccccHHHHHHHHHHHhcCCEEEEeccc
Confidence 2100 000125677888888888877643
No 417
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=96.99 E-value=0.0022 Score=57.91 Aligned_cols=100 Identities=12% Similarity=0.206 Sum_probs=69.4
Q ss_pred ccCCCCCEEEEEccc----------HHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcC
Q 027408 31 AYDLEGKTVGTVGCG----------RIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNT 100 (223)
Q Consensus 31 ~~~l~g~~igIiG~G----------~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~ 100 (223)
+..+.|++|+|+|+- .-...+++.|...|.+|.+|||.-.. .. .+....++++.++++|+|++++
T Consensus 348 ~~~~~~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~g~~V~~~DP~~~~---~~--~~~~~~~~~~~~~~ad~vvi~t 422 (478)
T 3g79_A 348 GKKMDGSKVAMLGWAFIKDSDDARNTPSEPYRDLCLKAGASVMVHDPYVVN---YP--GVEISDNLEEVVRNADAIVVLA 422 (478)
T ss_dssp TCCSTTCEEEEECSSSSTTCSCCTTCTHHHHHHHHHHHTCEEEEECSSCCC---BT--TBCEESCHHHHHTTCSEEEECS
T ss_pred ccCCCCCEEEEEeeecCCCCcchhcCcHHHHHHHHHHCCCEEEEECCCccc---cc--CcceecCHHHHHhcCCEEEEec
Confidence 346899999999963 23678999999999999999996531 11 2334568999999999999998
Q ss_pred CCChhhhhcccHHHHhcCC-CCcEEEEcCCCCccCHHHH
Q 027408 101 PLTEKTRGMFDKDRIAKMK-KGVLIVNNARGAIMDTQAV 138 (223)
Q Consensus 101 p~~~~t~~~i~~~~~~~mk-~ga~ivn~srg~~vd~~al 138 (223)
+- ++.+.+=.....+.|+ +..+|+|. |+- .|.+.+
T Consensus 423 ~~-~~f~~~d~~~~~~~~~~~~~~i~D~-rn~-~~~~~~ 458 (478)
T 3g79_A 423 GH-SAYSSLKADWAKKVSAKANPVIIDG-RNV-IEPDEF 458 (478)
T ss_dssp CC-HHHHSCCHHHHHHHHCCSSCEEEES-SSC-SCHHHH
T ss_pred CC-HHHHhhhHHHHHHHhccCCCEEEEC-CCC-CCHHHH
Confidence 72 2333222234455677 37788885 543 454443
No 418
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=96.97 E-value=0.0019 Score=55.60 Aligned_cols=90 Identities=19% Similarity=0.113 Sum_probs=64.3
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCCe-EEEEcCCCCChhHHHhhCCe---e-c-----CCHHhhc------ccCCEEEE
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNCN-LLYHDRVKMDPQLEKETGAK---F-E-----EDLDTML------PKCDIVVV 98 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~~-V~~~d~~~~~~~~~~~~g~~---~-~-----~~l~e~l------~~aDvVv~ 98 (223)
.|.+|.|+|.|.+|...++.++.+|.+ |++.++++...+.++++.-. + . .++.+.+ ...|+|+-
T Consensus 179 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid 258 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVALE 258 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCCCCEEEE
Confidence 588999999999999999999999997 99999876555666655211 1 0 1111211 25899999
Q ss_pred cCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 027408 99 NTPLTEKTRGMFDKDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 99 ~~p~~~~t~~~i~~~~~~~mk~ga~ivn~sr 129 (223)
++.. +. .-...++.++++..++.++.
T Consensus 259 ~~g~-~~----~~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 259 CTGV-ES----SIAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp CSCC-HH----HHHHHHHHSCTTCEEEECCC
T ss_pred CCCC-hH----HHHHHHHHhcCCCEEEEEcc
Confidence 8872 11 12567788999999998864
No 419
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=96.97 E-value=0.00053 Score=59.36 Aligned_cols=89 Identities=18% Similarity=0.176 Sum_probs=64.8
Q ss_pred CCCEEEEEc-ccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeec-----CCHHhhc-----ccCCEEEEcCCCC
Q 027408 35 EGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLDTML-----PKCDIVVVNTPLT 103 (223)
Q Consensus 35 ~g~~igIiG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~e~l-----~~aDvVv~~~p~~ 103 (223)
.|++|.|+| .|.+|..+++.++..|++|++.++++...+.++++|.... .++.+.+ ...|+|+.++..
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~- 241 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGG- 241 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEEEEECSCT-
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCEEEECCCH-
Confidence 589999999 7999999999999999999999987544455666665321 2333333 247888888762
Q ss_pred hhhhhcccHHHHhcCCCCcEEEEcCC
Q 027408 104 EKTRGMFDKDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 104 ~~t~~~i~~~~~~~mk~ga~ivn~sr 129 (223)
+ .....++.++++..++.++.
T Consensus 242 ~-----~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 242 A-----MFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp H-----HHHHHHHHEEEEEEEEECCC
T ss_pred H-----HHHHHHHHHhcCCEEEEEeC
Confidence 1 22567788888888888764
No 420
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=96.96 E-value=0.0014 Score=59.01 Aligned_cols=37 Identities=14% Similarity=0.208 Sum_probs=28.9
Q ss_pred CCCCCEEEEEcccHHHHHHHHHHcc-CCC---eEEEEcCCCC
Q 027408 33 DLEGKTVGTVGCGRIGKLLLQRLKP-FNC---NLLYHDRVKM 70 (223)
Q Consensus 33 ~l~g~~igIiG~G~iG~~iA~~l~~-~G~---~V~~~d~~~~ 70 (223)
.+.+ +|.|||+|.||+.+|..+.. .++ +|++.|+...
T Consensus 11 ~~~~-rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~ 51 (480)
T 2ph5_A 11 LFKN-RFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGT 51 (480)
T ss_dssp CCCS-CEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCC
T ss_pred cCCC-CEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchh
Confidence 3454 58999999999999999864 455 6888887653
No 421
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=96.96 E-value=0.0016 Score=54.69 Aligned_cols=39 Identities=10% Similarity=0.065 Sum_probs=35.2
Q ss_pred ccCCCCCEEEEEccc---HHHHHHHHHHccCCCeEEEEcCCC
Q 027408 31 AYDLEGKTVGTVGCG---RIGKLLLQRLKPFNCNLLYHDRVK 69 (223)
Q Consensus 31 ~~~l~g~~igIiG~G---~iG~~iA~~l~~~G~~V~~~d~~~ 69 (223)
...+.||++.|.|.+ .||+++|+.|...|++|++.+++.
T Consensus 25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~ 66 (296)
T 3k31_A 25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSE 66 (296)
T ss_dssp CCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred hhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCCh
Confidence 346899999999985 899999999999999999999875
No 422
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=96.96 E-value=0.00046 Score=59.49 Aligned_cols=101 Identities=12% Similarity=0.151 Sum_probs=62.9
Q ss_pred CEEEEEcccHHHHHHHHHHccC---------CCeE-EEEcCCCCChhHHHhhCC-eecCCHHhhcccCCEEEEcCCCChh
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPF---------NCNL-LYHDRVKMDPQLEKETGA-KFEEDLDTMLPKCDIVVVNTPLTEK 105 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~---------G~~V-~~~d~~~~~~~~~~~~g~-~~~~~l~e~l~~aDvVv~~~p~~~~ 105 (223)
.+|||||+|.||+.+++.+... +++| .++|++..... ..+. ...+++++++ +.|+|+.|+|....
T Consensus 4 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~---~~~~~~~~~d~~~ll-~iDvVve~t~~~~~ 79 (332)
T 2ejw_A 4 LKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKPR---AIPQELLRAEPFDLL-EADLVVEAMGGVEA 79 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSCC---SSCGGGEESSCCCCT-TCSEEEECCCCSHH
T ss_pred eEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHhh---ccCcccccCCHHHHh-CCCEEEECCCCcHH
Confidence 3799999999999999988654 4564 46777642211 1111 2356888888 99999999984421
Q ss_pred hhhcccHHHHhcCCCCcEEEEcCCCCc-cCHHHHHHHHHhC
Q 027408 106 TRGMFDKDRIAKMKKGVLIVNNARGAI-MDTQAVVDACSSG 145 (223)
Q Consensus 106 t~~~i~~~~~~~mk~ga~ivn~srg~~-vd~~al~~~L~~g 145 (223)
.. +-..+.++.|..+|...-..+ ..-+.|.++-++.
T Consensus 80 a~----~~~~~AL~aGKhVVtaNkkpla~~~~eL~~~A~~~ 116 (332)
T 2ejw_A 80 PL----RLVLPALEAGIPLITANKALLAEAWESLRPFAEEG 116 (332)
T ss_dssp HH----HHHHHHHHTTCCEEECCHHHHHHSHHHHHHHHHTT
T ss_pred HH----HHHHHHHHcCCeEEECCchhHHHHHHHHHHHHHhC
Confidence 11 222345667777776433222 2445566665555
No 423
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=96.95 E-value=0.00064 Score=58.12 Aligned_cols=89 Identities=25% Similarity=0.210 Sum_probs=62.0
Q ss_pred CCCEEEEEcc-cHHHHHHHHHHccCCCeEEEEcCCCCChhHHH-hhCCeec------CCHHhhcc-----cCCEEEEcCC
Q 027408 35 EGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEK-ETGAKFE------EDLDTMLP-----KCDIVVVNTP 101 (223)
Q Consensus 35 ~g~~igIiG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~-~~g~~~~------~~l~e~l~-----~aDvVv~~~p 101 (223)
.|++|.|+|. |.+|..+++.++..|++|++.+++....+.++ ++|.... .++.+.+. ..|+|+.++.
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g 234 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVG 234 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEEEEEESSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCcEEEECCC
Confidence 5899999997 99999999999999999999998754444444 4564311 12333332 4788887775
Q ss_pred CChhhhhcccHHHHhcCCCCcEEEEcCC
Q 027408 102 LTEKTRGMFDKDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 102 ~~~~t~~~i~~~~~~~mk~ga~ivn~sr 129 (223)
. + .....++.++++..++.++.
T Consensus 235 ~-~-----~~~~~~~~l~~~G~~v~~G~ 256 (345)
T 2j3h_A 235 G-K-----MLDAVLVNMNMHGRIAVCGM 256 (345)
T ss_dssp H-H-----HHHHHHTTEEEEEEEEECCC
T ss_pred H-H-----HHHHHHHHHhcCCEEEEEcc
Confidence 2 1 22566777888888877753
No 424
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=96.95 E-value=0.0027 Score=54.47 Aligned_cols=88 Identities=18% Similarity=0.144 Sum_probs=65.4
Q ss_pred CCEEEEE-cccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeec-----CCHHhhc------ccCCEEEEcCCCC
Q 027408 36 GKTVGTV-GCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLDTML------PKCDIVVVNTPLT 103 (223)
Q Consensus 36 g~~igIi-G~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~e~l------~~aDvVv~~~p~~ 103 (223)
+++|.|. |.|.+|...++.++..|++|++.+++....+.++++|...+ .++.+.+ ...|+|+-++..
T Consensus 165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~~~g~D~vid~~g~- 243 (349)
T 3pi7_A 165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRIFLDAVTG- 243 (349)
T ss_dssp CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSEEEETTSTTHHHHHHHHHHHHCCCEEEESSCH-
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCcHHHHHHHHHHhcCCCCcEEEECCCC-
Confidence 3677665 89999999999999999999999987766677777776421 2233322 258999988861
Q ss_pred hhhhhcccHHHHhcCCCCcEEEEcCC
Q 027408 104 EKTRGMFDKDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 104 ~~t~~~i~~~~~~~mk~ga~ivn~sr 129 (223)
+ .+ ...++.++++..++.++.
T Consensus 244 ~----~~-~~~~~~l~~~G~iv~~G~ 264 (349)
T 3pi7_A 244 P----LA-SAIFNAMPKRARWIIYGR 264 (349)
T ss_dssp H----HH-HHHHHHSCTTCEEEECCC
T ss_pred h----hH-HHHHhhhcCCCEEEEEec
Confidence 1 12 667889999999999873
No 425
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=96.94 E-value=0.00065 Score=59.14 Aligned_cols=90 Identities=20% Similarity=0.258 Sum_probs=52.5
Q ss_pred CEEEEEcccHHHHHHHHHHccC--C--CeEE-EEcCCCCChhHHHhh-CCeecCCHHhhccc------------------
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPF--N--CNLL-YHDRVKMDPQLEKET-GAKFEEDLDTMLPK------------------ 92 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~--G--~~V~-~~d~~~~~~~~~~~~-g~~~~~~l~e~l~~------------------ 92 (223)
.+|||||+|.||+.+++.+... | ++|. ++|++. ......+ |+..+++.++++.+
T Consensus 5 i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~~~--~~~~~~~~gi~~~~~~~e~l~~~~~~~~did~v~e~~~~~ 82 (358)
T 1ebf_A 5 VNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAER--SLISKDFSPLNVGSDWKAALAASTTKTLPLDDLIAHLKTS 82 (358)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSSB--EEECSSCSCCSCTTCHHHHHHTCCCBCCCHHHHHHHHTTC
T ss_pred EEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEECCh--hhhccccCCCCccccHHHHHhcccCCCCCHHHHHHHhhhc
Confidence 4799999999999999999764 3 4554 556432 1111222 33333445555432
Q ss_pred --CCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCcc
Q 027408 93 --CDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIM 133 (223)
Q Consensus 93 --aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~v 133 (223)
.|+|+.|+|..... ......++.|..+|...-..+-
T Consensus 83 ~~~DvVV~~t~~~~~a-----~~~~~AL~aGkhVVtaNkkpla 120 (358)
T 1ebf_A 83 PKPVILVDNTSSAYIA-----GFYTKFVENGISIATPNKKAFS 120 (358)
T ss_dssp SSCEEEEECSCCHHHH-----TTHHHHHHTTCEEECCCCGGGS
T ss_pred cCCcEEEEcCCChHHH-----HHHHHHHHCCCeEEecCccccc
Confidence 27999999843221 1223456667777765444443
No 426
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=96.94 E-value=0.0019 Score=55.92 Aligned_cols=89 Identities=12% Similarity=0.086 Sum_probs=64.4
Q ss_pred CCCEEEEEc-ccHHHHHHHHHHcc-CCCeEEEEcCCCCChhHHHhhCCeec----CCHHhhc-----ccCCEEEEcCCCC
Q 027408 35 EGKTVGTVG-CGRIGKLLLQRLKP-FNCNLLYHDRVKMDPQLEKETGAKFE----EDLDTML-----PKCDIVVVNTPLT 103 (223)
Q Consensus 35 ~g~~igIiG-~G~iG~~iA~~l~~-~G~~V~~~d~~~~~~~~~~~~g~~~~----~~l~e~l-----~~aDvVv~~~p~~ 103 (223)
.|.+|.|+| .|.+|...++.++. .|.+|++.++++...+.++++|...+ +++.+.+ ...|+|+-++..
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~~~~~~v~~~~~~g~Dvvid~~g~- 249 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAALGLGAPAFVFSTTHT- 249 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEECTTSCHHHHHHTTCSCCEEEEEECSCH-
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHhcCCCceEEEECCCc-
Confidence 688999999 99999999999997 59999999987655666777776422 2233322 247888887761
Q ss_pred hhhhhcccHHHHhcCCCCcEEEEcC
Q 027408 104 EKTRGMFDKDRIAKMKKGVLIVNNA 128 (223)
Q Consensus 104 ~~t~~~i~~~~~~~mk~ga~ivn~s 128 (223)
.......++.++++..++.++
T Consensus 250 ----~~~~~~~~~~l~~~G~iv~~g 270 (363)
T 4dvj_A 250 ----DKHAAEIADLIAPQGRFCLID 270 (363)
T ss_dssp ----HHHHHHHHHHSCTTCEEEECS
T ss_pred ----hhhHHHHHHHhcCCCEEEEEC
Confidence 112256778888888888773
No 427
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=96.94 E-value=0.0016 Score=51.86 Aligned_cols=66 Identities=15% Similarity=0.146 Sum_probs=47.3
Q ss_pred CEEEEEc-ccHHHHHHHHHHccCCCeEEEEcCCCCChhHH-Hh-----hCCeecCCHHhhcccCCEEEEcCCC
Q 027408 37 KTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLE-KE-----TGAKFEEDLDTMLPKCDIVVVNTPL 102 (223)
Q Consensus 37 ~~igIiG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~-~~-----~g~~~~~~l~e~l~~aDvVv~~~p~ 102 (223)
++|.|.| .|.||+.+++.|...|.+|++.+|++...+.. .. .++...++++++++++|+|+.+...
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~ 77 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCKGADAVISAFNP 77 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHhcCCCEEEEeCcC
Confidence 7899999 59999999999999999999999975221110 00 1111123456778899999988754
No 428
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=96.92 E-value=0.005 Score=54.23 Aligned_cols=68 Identities=16% Similarity=0.318 Sum_probs=52.7
Q ss_pred CCCCCEEEEEcc-----c---HHHHHHHHHHccCCCeEEEEcCCCC--ChhHH-------HhhCC--eecCCHHhhcccC
Q 027408 33 DLEGKTVGTVGC-----G---RIGKLLLQRLKPFNCNLLYHDRVKM--DPQLE-------KETGA--KFEEDLDTMLPKC 93 (223)
Q Consensus 33 ~l~g~~igIiG~-----G---~iG~~iA~~l~~~G~~V~~~d~~~~--~~~~~-------~~~g~--~~~~~l~e~l~~a 93 (223)
.|.|++|+|+|. | ++.++++..+..+|++|.+..|..- .++.. +..|. ....+++++++++
T Consensus 188 ~l~Glkva~vgd~~~~~G~~nnVa~Sli~~~~~lG~~v~~~~P~~~~~~~~~~~~a~~~a~~~G~~i~~~~d~~eav~~a 267 (399)
T 3q98_A 188 NLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVTSMEEAFKDA 267 (399)
T ss_dssp GGTTCEEEEECCCCSSCCCCTHHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTC
T ss_pred ccCCCEEEEEEecccccCcchHHHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEEcCHHHHhCCC
Confidence 378999999984 4 7999999999999999999998632 23322 23453 4567999999999
Q ss_pred CEEEEcC
Q 027408 94 DIVVVNT 100 (223)
Q Consensus 94 DvVv~~~ 100 (223)
|+|+.-+
T Consensus 268 DvVytd~ 274 (399)
T 3q98_A 268 DIVYPKS 274 (399)
T ss_dssp SEEEECC
T ss_pred CEEEecC
Confidence 9998764
No 429
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=96.91 E-value=0.0052 Score=55.39 Aligned_cols=99 Identities=18% Similarity=0.176 Sum_probs=68.3
Q ss_pred cCCCCCEEEEEccc----------HHHHHHHHHHccCCCeEEEEcCCCCChhHHHhh------------CCeecCCHHhh
Q 027408 32 YDLEGKTVGTVGCG----------RIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKET------------GAKFEEDLDTM 89 (223)
Q Consensus 32 ~~l~g~~igIiG~G----------~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~------------g~~~~~~l~e~ 89 (223)
..+.|++|+|+|+- .-...+++.|...|.+|.+|||.. ..+....+ .+....++++.
T Consensus 324 ~~~~~~~v~vlGlafK~~~dD~R~Sp~~~i~~~L~~~g~~v~~~DP~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (478)
T 2y0c_A 324 EDLTGRTFAIWGLAFKPNTDDMREAPSRELIAELLSRGARIAAYDPVA-QEEARRVIALDLADHPSWLERLSFVDDEAQA 402 (478)
T ss_dssp SCCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHHHHTTCEEEEECTTT-HHHHHHHHHHHTTTCHHHHTTEEECSSHHHH
T ss_pred ccCCCCEEEEEecccCCCCCccccChHHHHHHHHHHCCCEEEEECCCc-cHHHHHhhccccccccccccceeecCCHHHH
Confidence 36899999999952 357788999999999999999964 22211222 25566788999
Q ss_pred cccCCEEEEcCCCChhhhhcccHH-HHhcCCCCcEEEEcCCCCccCHH
Q 027408 90 LPKCDIVVVNTPLTEKTRGMFDKD-RIAKMKKGVLIVNNARGAIMDTQ 136 (223)
Q Consensus 90 l~~aDvVv~~~p~~~~t~~~i~~~-~~~~mk~ga~ivn~srg~~vd~~ 136 (223)
++++|+|++++.-. +.+. ++.+ ..+.|+ ..+|+|+ |+ +.|.+
T Consensus 403 ~~~ad~~vi~t~~~-~f~~-~~~~~~~~~~~-~~~i~D~-r~-~~~~~ 445 (478)
T 2y0c_A 403 ARDADALVIVTEWK-IFKS-PDFVALGRLWK-TPVIFDG-RN-LYEPE 445 (478)
T ss_dssp TTTCSEEEECSCCG-GGGS-CCHHHHHTTCS-SCEEEES-SC-CSCHH
T ss_pred HhCCCEEEEecCCh-Hhhc-cCHHHHHhhcC-CCEEEEC-CC-CCCHH
Confidence 99999999999843 3332 3444 445555 4788887 44 34544
No 430
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=96.90 E-value=0.0039 Score=55.66 Aligned_cols=110 Identities=18% Similarity=0.232 Sum_probs=68.5
Q ss_pred ccCCCCCEEEEEcccHHHHHHHHHHccCCCeEE-EEcCC-------CCChhHHH------h-------------hCCeec
Q 027408 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLL-YHDRV-------KMDPQLEK------E-------------TGAKFE 83 (223)
Q Consensus 31 ~~~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~-~~d~~-------~~~~~~~~------~-------------~g~~~~ 83 (223)
+.+|.|+||.|-|+|++|...|+.|...|.+|+ +.|.+ ....+... . .+.+.+
T Consensus 234 g~~l~g~~VaVQG~GnVG~~aa~~L~e~GakvVavsD~~G~iyd~~Gld~~~l~~~~~~k~~~~~~v~~~~~~~~~a~~v 313 (456)
T 3r3j_A 234 NDNLENKKCLVSGSGNVAQYLVEKLIEKGAIVLTMSDSNGYILEPNGFTKEQLNYIMDIKNNQRLRLKEYLKYSKTAKYF 313 (456)
T ss_dssp TCCSTTCCEEEECCSHHHHHHHHHHHHHTCCBCCEECSSCEEECTTCCCHHHHHHHHHHHHTSCCCGGGGGGTCSSCEEE
T ss_pred CCCccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHHHhcCcchhhhhhcCCCceEe
Confidence 457999999999999999999999999999875 55532 22111110 0 122223
Q ss_pred CCHHhhc-ccCCEEEEcCCCChhhhhcccHHHHhcCC--CCcEEEEcCCCCccCHHHHHHHHHhCCcc
Q 027408 84 EDLDTML-PKCDIVVVNTPLTEKTRGMFDKDRIAKMK--KGVLIVNNARGAIMDTQAVVDACSSGHIA 148 (223)
Q Consensus 84 ~~l~e~l-~~aDvVv~~~p~~~~t~~~i~~~~~~~mk--~ga~ivn~srg~~vd~~al~~~L~~g~i~ 148 (223)
+.++++ -+||+.+-|.- .+.|+.+....+. +=.+|+-.+.+.+ ..+| .+.|.+..|.
T Consensus 314 -~~~~i~~~~~DI~iPcA~-----~~~I~~~na~~l~~~~ak~V~EgAN~p~-T~eA-~~iL~~rGI~ 373 (456)
T 3r3j_A 314 -ENQKPWNIPCDIAFPCAT-----QNEINENDADLFIQNKCKMIVEGANMPT-HIKA-LHKLKQNNII 373 (456)
T ss_dssp -CSCCGGGSCCSEEEECSC-----TTCBCHHHHHHHHHHTCCEEECCSSSCB-CTTH-HHHHHTTTCE
T ss_pred -CCccccccCccEEEeCCC-----ccchhhHHHHHHHhcCCeEEEecCCCCC-CHHH-HHHHHHCCCE
Confidence 234444 46999888875 5567777776662 2245566666664 3333 3566665555
No 431
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=96.89 E-value=0.0015 Score=52.41 Aligned_cols=70 Identities=19% Similarity=0.223 Sum_probs=50.8
Q ss_pred CCCCEEEEEc-ccHHHHHHHHHHccCCC--eEEEEcCCCCChhHHHhhCC-------eecCCHHhhcccCCEEEEcCCCC
Q 027408 34 LEGKTVGTVG-CGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQLEKETGA-------KFEEDLDTMLPKCDIVVVNTPLT 103 (223)
Q Consensus 34 l~g~~igIiG-~G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~g~-------~~~~~l~e~l~~aDvVv~~~p~~ 103 (223)
+.+++|.|.| .|.||+.+++.|...|. +|++++|++...+.....++ ...++++++++.+|+|+.+....
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~ 95 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTT 95 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCC
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECCCcc
Confidence 5789999999 59999999999999999 99999987632221111111 12245667788899999887644
No 432
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=96.88 E-value=0.0016 Score=56.39 Aligned_cols=88 Identities=17% Similarity=0.267 Sum_probs=51.5
Q ss_pred CEEEEEc-ccHHHHHHHHHHccC-CCeEEEEc--CCCCChhHHHhh-------------CCeec-CCHHhhcccCCEEEE
Q 027408 37 KTVGTVG-CGRIGKLLLQRLKPF-NCNLLYHD--RVKMDPQLEKET-------------GAKFE-EDLDTMLPKCDIVVV 98 (223)
Q Consensus 37 ~~igIiG-~G~iG~~iA~~l~~~-G~~V~~~d--~~~~~~~~~~~~-------------g~~~~-~~l~e~l~~aDvVv~ 98 (223)
.+|||+| +|.||+.+.+.|... .+++.++. ++.........+ ..... .+.++ +.++|+|++
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~vDvVf~ 83 (350)
T 2ep5_A 5 IKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVSTNYED-HKDVDVVLS 83 (350)
T ss_dssp EEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECSSGGG-GTTCSEEEE
T ss_pred cEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeCCHHH-hcCCCEEEE
Confidence 5899999 899999999999765 45776553 221111121111 11111 13344 478999999
Q ss_pred cCCCChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 027408 99 NTPLTEKTRGMFDKDRIAKMKKGVLIVNNARG 130 (223)
Q Consensus 99 ~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg 130 (223)
|+|.... . +..-..++.|+.+|+.+..
T Consensus 84 atp~~~s--~---~~a~~~~~aG~~VId~s~~ 110 (350)
T 2ep5_A 84 ALPNELA--E---SIELELVKNGKIVVSNASP 110 (350)
T ss_dssp CCCHHHH--H---HHHHHHHHTTCEEEECSST
T ss_pred CCChHHH--H---HHHHHHHHCCCEEEECCcc
Confidence 9992211 1 1122234567888888743
No 433
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=96.87 E-value=0.0023 Score=54.58 Aligned_cols=91 Identities=18% Similarity=0.122 Sum_probs=66.2
Q ss_pred CCCCEEEEEcccHHHHHHHHHHccCCCe-EEEEcCCCCChhHHHhhCCeec-----CCHHhhc------ccCCEEEEcCC
Q 027408 34 LEGKTVGTVGCGRIGKLLLQRLKPFNCN-LLYHDRVKMDPQLEKETGAKFE-----EDLDTML------PKCDIVVVNTP 101 (223)
Q Consensus 34 l~g~~igIiG~G~iG~~iA~~l~~~G~~-V~~~d~~~~~~~~~~~~g~~~~-----~~l~e~l------~~aDvVv~~~p 101 (223)
..|.+|.|+|.|.+|...++.++..|.+ +++.++++...+.++++|...+ .+..+.. ...|+|+-++.
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g~d~v~d~~G 238 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLILETAG 238 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCSSEEEEECSC
T ss_pred CCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCCccccccccc
Confidence 4689999999999999999999999986 5688887666677788886422 2333322 24688887775
Q ss_pred CChhhhhcccHHHHhcCCCCcEEEEcCC
Q 027408 102 LTEKTRGMFDKDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 102 ~~~~t~~~i~~~~~~~mk~ga~ivn~sr 129 (223)
. +.+ -+..++.++++..++.++.
T Consensus 239 ~-~~~----~~~~~~~l~~~G~~v~~g~ 261 (346)
T 4a2c_A 239 V-PQT----VELAVEIAGPHAQLALVGT 261 (346)
T ss_dssp S-HHH----HHHHHHHCCTTCEEEECCC
T ss_pred c-cch----hhhhhheecCCeEEEEEec
Confidence 2 221 2567788999998887764
No 434
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=96.87 E-value=0.0031 Score=54.65 Aligned_cols=91 Identities=20% Similarity=0.229 Sum_probs=65.6
Q ss_pred CCCEEEEEc-ccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeec-----CCHHhhc---ccCCEEEEcCCCChh
Q 027408 35 EGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLDTML---PKCDIVVVNTPLTEK 105 (223)
Q Consensus 35 ~g~~igIiG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~e~l---~~aDvVv~~~p~~~~ 105 (223)
.|++|.|+| .|.+|...++.++..|++|++.++ ....+.++++|...+ .++.+.+ ...|+|+-++.....
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~g~D~vid~~g~~~~ 261 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVGGSTE 261 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHHHHHTTCSEEEETTSSCHHHHHHTSCCBSEEEESSCTTHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHHHHHcCCCEEEECCchHHHHHHhhcCCCCEEEECCCChhh
Confidence 689999999 799999999999999999988874 444566677776421 1233222 358999998873311
Q ss_pred hhhcccHHHHhcCCCCcEEEEcCCC
Q 027408 106 TRGMFDKDRIAKMKKGVLIVNNARG 130 (223)
Q Consensus 106 t~~~i~~~~~~~mk~ga~ivn~srg 130 (223)
+ ....+..++++..++.++..
T Consensus 262 ~----~~~~~~~l~~~G~iv~~g~~ 282 (375)
T 2vn8_A 262 T----WAPDFLKKWSGATYVTLVTP 282 (375)
T ss_dssp H----HGGGGBCSSSCCEEEESCCS
T ss_pred h----hHHHHHhhcCCcEEEEeCCC
Confidence 1 13456778999999998754
No 435
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=96.86 E-value=0.0014 Score=56.49 Aligned_cols=30 Identities=27% Similarity=0.445 Sum_probs=24.8
Q ss_pred CEEEEEcccHHHHHHHHHHccC-CCeEEEEc
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPF-NCNLLYHD 66 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~-G~~V~~~d 66 (223)
.+|||+|+|+||+.+++.+... +++|.+++
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~ 34 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQSEDVELVAVN 34 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEE
T ss_pred eEEEEECcCHHHHHHHHHHhCCCCeEEEEEE
Confidence 3899999999999999998765 67766554
No 436
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=96.85 E-value=0.0012 Score=57.80 Aligned_cols=95 Identities=15% Similarity=0.139 Sum_probs=66.3
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCC-eEEEEcCCCCChhHHHhhCCeecC-----CHHhhc------ccCCEEEEcCCC
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFEE-----DLDTML------PKCDIVVVNTPL 102 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~~-----~l~e~l------~~aDvVv~~~p~ 102 (223)
.|.+|.|+|.|.+|...++.++.+|+ +|++.++++...+.++++|+..+. ++.+.+ ...|+|+-++..
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~G~ 264 (398)
T 1kol_A 185 PGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAVDAVGF 264 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSSSCHHHHHHHHHSSSCEEEEEECCCT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCcEEccCCcchHHHHHHHHhCCCCCCEEEECCCC
Confidence 68999999999999999999999999 699999876556677777764321 122222 247999888873
Q ss_pred Chhh----------hhcccHHHHhcCCCCcEEEEcCC
Q 027408 103 TEKT----------RGMFDKDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 103 ~~~t----------~~~i~~~~~~~mk~ga~ivn~sr 129 (223)
.... ....-.+.++.++++..++.++.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~ 301 (398)
T 1kol_A 265 EARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGL 301 (398)
T ss_dssp TCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSC
T ss_pred cccccccccccccchHHHHHHHHHHHhcCCEEEEecc
Confidence 2100 00012567788888888887763
No 437
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=96.84 E-value=0.00096 Score=57.15 Aligned_cols=90 Identities=16% Similarity=0.079 Sum_probs=66.2
Q ss_pred CCCEEEEEcccHHHHHHHHHHccC-CCeEEEEcCCCCChhHHHhhCCeec----CCHHhh----cc--cCCEEEEcCCCC
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPF-NCNLLYHDRVKMDPQLEKETGAKFE----EDLDTM----LP--KCDIVVVNTPLT 103 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~-G~~V~~~d~~~~~~~~~~~~g~~~~----~~l~e~----l~--~aDvVv~~~p~~ 103 (223)
.|.+|.|+|.|.+|...++.++.. |.+|++.++++...+.++++|...+ .++.+. .. ..|+|+-++...
T Consensus 171 ~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~v~~~t~g~g~d~v~d~~G~~ 250 (345)
T 3jv7_A 171 PGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDFVGAQ 250 (345)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECSTTHHHHHHHHHGGGCEEEEEESSCCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCCcHHHHHHHHhCCCCCeEEEECCCCH
Confidence 589999999999999999999987 7899999987766677778876422 122222 11 579998888721
Q ss_pred hhhhhcccHHHHhcCCCCcEEEEcCC
Q 027408 104 EKTRGMFDKDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 104 ~~t~~~i~~~~~~~mk~ga~ivn~sr 129 (223)
+ .-...++.++++..++.++-
T Consensus 251 ~-----~~~~~~~~l~~~G~iv~~G~ 271 (345)
T 3jv7_A 251 S-----TIDTAQQVVAVDGHISVVGI 271 (345)
T ss_dssp H-----HHHHHHHHEEEEEEEEECSC
T ss_pred H-----HHHHHHHHHhcCCEEEEECC
Confidence 1 22567788888888888763
No 438
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=96.84 E-value=0.0011 Score=56.04 Aligned_cols=73 Identities=16% Similarity=0.120 Sum_probs=50.7
Q ss_pred cccCCCCCEEEEEcc-cHHHHHHHHHHccCCCeEEEEcCCCCChh-HHHh-hCCe-------ecCCHHhhcc--cCCEEE
Q 027408 30 RAYDLEGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQ-LEKE-TGAK-------FEEDLDTMLP--KCDIVV 97 (223)
Q Consensus 30 ~~~~l~g~~igIiG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~-~~~~-~g~~-------~~~~l~e~l~--~aDvVv 97 (223)
....+.+++|.|.|. |.||+.+++.|...|++|++++|+..... .... .++. ...+++++++ .+|+|+
T Consensus 14 ~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vi 93 (330)
T 2pzm_A 14 LVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVV 93 (330)
T ss_dssp CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEE
Confidence 345789999999997 99999999999999999999998642211 1111 1111 1123456676 789988
Q ss_pred EcCCC
Q 027408 98 VNTPL 102 (223)
Q Consensus 98 ~~~p~ 102 (223)
.+...
T Consensus 94 h~A~~ 98 (330)
T 2pzm_A 94 HSAAA 98 (330)
T ss_dssp ECCCC
T ss_pred ECCcc
Confidence 77653
No 439
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=96.84 E-value=0.00093 Score=57.32 Aligned_cols=90 Identities=19% Similarity=0.167 Sum_probs=61.9
Q ss_pred CCCEEEEEccc-HHHHHHHHHHccC-CCeEEEEcCCCCChhHHHhhCCeec-----CC----HHhhc--ccCCEEEEcCC
Q 027408 35 EGKTVGTVGCG-RIGKLLLQRLKPF-NCNLLYHDRVKMDPQLEKETGAKFE-----ED----LDTML--PKCDIVVVNTP 101 (223)
Q Consensus 35 ~g~~igIiG~G-~iG~~iA~~l~~~-G~~V~~~d~~~~~~~~~~~~g~~~~-----~~----l~e~l--~~aDvVv~~~p 101 (223)
.|++|.|+|.| .||..+++.++.. |++|++.++++...+.++++|.... .+ +.++. ...|+|+.++.
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 249 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNN 249 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESCC
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEEecCCCccHHHHHHHHhcCCCceEEEECCC
Confidence 58899999998 9999999999998 9999999987644455556664321 11 22333 25788887776
Q ss_pred CChhhhhcccHHHHhcCCCCcEEEEcCC
Q 027408 102 LTEKTRGMFDKDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 102 ~~~~t~~~i~~~~~~~mk~ga~ivn~sr 129 (223)
..+. ....++.++++..++.++.
T Consensus 250 ~~~~-----~~~~~~~l~~~G~iv~~g~ 272 (347)
T 1jvb_A 250 SEKT-----LSVYPKALAKQGKYVMVGL 272 (347)
T ss_dssp CHHH-----HTTGGGGEEEEEEEEECCS
T ss_pred CHHH-----HHHHHHHHhcCCEEEEECC
Confidence 2111 1345567788878877764
No 440
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=96.83 E-value=0.0041 Score=50.94 Aligned_cols=37 Identities=19% Similarity=0.340 Sum_probs=33.4
Q ss_pred CCCCCEEEEEcc-cH--HHHHHHHHHccCCCeEEEEcCCC
Q 027408 33 DLEGKTVGTVGC-GR--IGKLLLQRLKPFNCNLLYHDRVK 69 (223)
Q Consensus 33 ~l~g~~igIiG~-G~--iG~~iA~~l~~~G~~V~~~d~~~ 69 (223)
++.||++.|.|. |. ||+++|+.|...|++|++.+++.
T Consensus 4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~ 43 (266)
T 3oig_A 4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGE 43 (266)
T ss_dssp CCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCch
Confidence 588999999997 55 99999999999999999998875
No 441
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=96.83 E-value=0.0014 Score=55.57 Aligned_cols=87 Identities=15% Similarity=0.093 Sum_probs=64.4
Q ss_pred CCEEEEEcc-cHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHh------hc-ccCCEEEEcCCCChhhh
Q 027408 36 GKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDT------ML-PKCDIVVVNTPLTEKTR 107 (223)
Q Consensus 36 g~~igIiG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e------~l-~~aDvVv~~~p~~~~t~ 107 (223)
|+ |.|+|. |.+|...++.++..|++|++.++++...+.++++|...+-+..+ +. ...|+|+-++.. .
T Consensus 148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d~~g~----~ 222 (324)
T 3nx4_A 148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTVGD----K 222 (324)
T ss_dssp CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEESSCH----H
T ss_pred Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecCCHHHHHhhcCCCccEEEECCCc----H
Confidence 45 999998 99999999999999999999998876777777888643212221 11 246888877751 1
Q ss_pred hcccHHHHhcCCCCcEEEEcCC
Q 027408 108 GMFDKDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 108 ~~i~~~~~~~mk~ga~ivn~sr 129 (223)
.....++.++++..++.++.
T Consensus 223 --~~~~~~~~l~~~G~iv~~G~ 242 (324)
T 3nx4_A 223 --VLAKVLAQMNYGGCVAACGL 242 (324)
T ss_dssp --HHHHHHHTEEEEEEEEECCC
T ss_pred --HHHHHHHHHhcCCEEEEEec
Confidence 23677888888888888864
No 442
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=96.82 E-value=0.0053 Score=55.36 Aligned_cols=104 Identities=17% Similarity=0.124 Sum_probs=70.4
Q ss_pred CCCCCEEEEEcc----------cHHHHHHHHHHccCCCeEEEEcCCCCChhH---HHh-h-------CCeecCCHHhhcc
Q 027408 33 DLEGKTVGTVGC----------GRIGKLLLQRLKPFNCNLLYHDRVKMDPQL---EKE-T-------GAKFEEDLDTMLP 91 (223)
Q Consensus 33 ~l~g~~igIiG~----------G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~---~~~-~-------g~~~~~~l~e~l~ 91 (223)
.+.|++|+|+|+ ..-...+++.|...|.+|.+|||.-...+. ... + .+...+++.+.++
T Consensus 332 ~~~~~~v~vlGlafK~~~dd~R~Spa~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (481)
T 2o3j_A 332 TVTDKKIAIFGFAFKKNTGDTRESSAIHVIKHLMEEHAKLSVYDPKVQKSQMLNDLASVTSAQDVERLITVESDPYAAAR 411 (481)
T ss_dssp CCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHHHHSCHHHHHHHEEEESSHHHHHT
T ss_pred ccCCCeEEEEeeeeCCCCCccccChHHHHHHHHHHCCCEEEEECCCCCchhhHHHHHhhhccccccCceeecCCHHHHHc
Confidence 489999999995 446788999999999999999996432211 111 1 1344567888999
Q ss_pred cCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHH
Q 027408 92 KCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVV 139 (223)
Q Consensus 92 ~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~ 139 (223)
++|+|++++.-. +.+.+=.....+.|+...+|+|. |+ ++|.+.+.
T Consensus 412 ~ad~~vi~t~~~-~f~~~~~~~~~~~~~~~~~i~D~-r~-~~~~~~~~ 456 (481)
T 2o3j_A 412 GAHAIVVLTEWD-EFVELNYSQIHNDMQHPAAIFDG-RL-ILDQKALR 456 (481)
T ss_dssp TCSEEEECSCCG-GGTTSCHHHHHHHSCSSCEEEES-SS-CSCHHHHH
T ss_pred CCCEEEEcCCcH-HhhccCHHHHHHhcCCCCEEEEC-CC-CCCHHHHH
Confidence 999999999732 33332223445567776678876 44 45655443
No 443
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=96.82 E-value=0.0039 Score=53.62 Aligned_cols=89 Identities=17% Similarity=0.066 Sum_probs=62.6
Q ss_pred CC-CEEEEEcc-cHHHHHHHHHHccCCCeEEEEcCCCCC----hhHHHhhCCeecCCH--------Hhhc--------cc
Q 027408 35 EG-KTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMD----PQLEKETGAKFEEDL--------DTML--------PK 92 (223)
Q Consensus 35 ~g-~~igIiG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~----~~~~~~~g~~~~~~l--------~e~l--------~~ 92 (223)
.| .+|.|+|. |.+|...++.++.+|++|++..++... .+..+++|...+-+. .+.+ ..
T Consensus 166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~~g 245 (364)
T 1gu7_A 166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGE 245 (364)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCC
T ss_pred CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhhccCCC
Confidence 57 89999998 999999999999999998888765433 344567776432111 1111 24
Q ss_pred CCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 027408 93 CDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 93 aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~sr 129 (223)
+|+|+-++.. + .. ...++.++++..++.++.
T Consensus 246 ~Dvvid~~G~-~---~~--~~~~~~l~~~G~~v~~g~ 276 (364)
T 1gu7_A 246 AKLALNCVGG-K---SS--TGIARKLNNNGLMLTYGG 276 (364)
T ss_dssp EEEEEESSCH-H---HH--HHHHHTSCTTCEEEECCC
T ss_pred ceEEEECCCc-h---hH--HHHHHHhccCCEEEEecC
Confidence 7999988861 1 11 256788999988888864
No 444
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=96.81 E-value=0.0047 Score=53.47 Aligned_cols=89 Identities=13% Similarity=0.004 Sum_probs=63.5
Q ss_pred CCCCEEEEEcc-cHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeec-----CCHHhhc-----ccCCEEEEcCCC
Q 027408 34 LEGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLDTML-----PKCDIVVVNTPL 102 (223)
Q Consensus 34 l~g~~igIiG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~e~l-----~~aDvVv~~~p~ 102 (223)
-.|.+|.|+|. |.+|...++.++..|++|++.. ++...+.++++|...+ .++.+.+ ...|+|+-++..
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d~~g~ 241 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITN 241 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEEESSCS
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEEECCCc
Confidence 47899999999 8999999999999999988775 4555667778886421 2222222 237999888872
Q ss_pred ChhhhhcccHHHHhcC-CCCcEEEEcC
Q 027408 103 TEKTRGMFDKDRIAKM-KKGVLIVNNA 128 (223)
Q Consensus 103 ~~~t~~~i~~~~~~~m-k~ga~ivn~s 128 (223)
. . .....++.+ +++..++.++
T Consensus 242 ~-~----~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 242 V-E----STTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp H-H----HHHHHHHHSCTTCEEEEESS
T ss_pred h-H----HHHHHHHHhhcCCCEEEEEe
Confidence 1 1 124566777 5788888876
No 445
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=96.81 E-value=0.0039 Score=52.53 Aligned_cols=108 Identities=10% Similarity=0.147 Sum_probs=75.8
Q ss_pred CCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCCh---------
Q 027408 34 LEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTE--------- 104 (223)
Q Consensus 34 l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~--------- 104 (223)
+.|++|.++|........++.|...|++|.+...... + ....|.....++.+.++++|+|+...|...
T Consensus 5 ~~~mki~v~~~~~~~~~~~~~L~~~g~~v~~~~~~~~--~-~~~~g~~~~~~~~~~~~~~d~ii~~~~~~~~~~~i~s~~ 81 (300)
T 2rir_A 5 LTGLKIAVIGGDARQLEIIRKLTEQQADIYLVGFDQL--D-HGFTGAVKCNIDEIPFQQIDSIILPVSATTGEGVVSTVF 81 (300)
T ss_dssp CCSCEEEEESBCHHHHHHHHHHHHTTCEEEEESCTTS--S-CCCTTEEECCGGGSCGGGCSEEECCSSCEETTTEECBSS
T ss_pred ccCCEEEEECCCHHHHHHHHHHHhCCCEEEEEecccc--c-cccccceeccchHHHHhcCCEEEeccccccCCccccccc
Confidence 6789999999999999999999999999987753211 1 112244444567788889999987444221
Q ss_pred -hhhhcccHHHHhcCCCCcEEEEcCCCCccCHHHHHHHHHhCCccE
Q 027408 105 -KTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAG 149 (223)
Q Consensus 105 -~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~ 149 (223)
.+...++++.++.++++.+|+ + + +|..++.+++.+..+.-
T Consensus 82 a~~~~~~~~~~l~~~~~l~~i~-~---g-~~~~d~~~~~~~~gi~v 122 (300)
T 2rir_A 82 SNEEVVLKQDHLDRTPAHCVIF-S---G-ISNAYLENIAAQAKRKL 122 (300)
T ss_dssp CSSCEECCHHHHHTSCTTCEEE-E---S-SCCHHHHHHHHHTTCCE
T ss_pred ccCCccchHHHHhhcCCCCEEE-E---e-cCCHHHHHHHHHCCCEE
Confidence 122236788999999988877 2 2 37778677777777663
No 446
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=96.81 E-value=0.001 Score=52.87 Aligned_cols=67 Identities=19% Similarity=0.243 Sum_probs=47.6
Q ss_pred CEEEEEc-ccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHh-----hCCee-cCCHHhhcccCCEEEEcCCCC
Q 027408 37 KTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE-----TGAKF-EEDLDTMLPKCDIVVVNTPLT 103 (223)
Q Consensus 37 ~~igIiG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~-----~g~~~-~~~l~e~l~~aDvVv~~~p~~ 103 (223)
++|.|.| .|.||+.+++.|...|++|++.+|+....+.... .++.. .+++.++++++|+|+.+....
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~ 74 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSG 74 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCCTTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCT
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhcCCceEEEecccCCHHHHHHHHcCCCEEEECCcCC
Confidence 4799999 7999999999999999999999997522111010 11111 224566788999999887644
No 447
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=96.81 E-value=0.0018 Score=55.82 Aligned_cols=91 Identities=15% Similarity=0.213 Sum_probs=55.1
Q ss_pred CEEEEEc-ccHHHHHHHHHHccC-CCeEEEE-cCC---CCChhHH------Hhh-CCeecC--CHHhhcccCCEEEEcCC
Q 027408 37 KTVGTVG-CGRIGKLLLQRLKPF-NCNLLYH-DRV---KMDPQLE------KET-GAKFEE--DLDTMLPKCDIVVVNTP 101 (223)
Q Consensus 37 ~~igIiG-~G~iG~~iA~~l~~~-G~~V~~~-d~~---~~~~~~~------~~~-g~~~~~--~l~e~l~~aDvVv~~~p 101 (223)
.+|+|+| .|.+|+.+.+.|... .+++..+ .++ ..-.... ... .....+ +.+++++++|+|++|+|
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~Dvvf~a~p 84 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFSPGVDVVFLATA 84 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSGGGTCTTCSEEEECSC
T ss_pred eEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCHHHHhcCCCEEEECCC
Confidence 5899999 599999999999874 5676654 333 1111111 110 121111 45566589999999999
Q ss_pred CChhhhhcccHHHH-hcCCCCcEEEEcCCCCcc
Q 027408 102 LTEKTRGMFDKDRI-AKMKKGVLIVNNARGAIM 133 (223)
Q Consensus 102 ~~~~t~~~i~~~~~-~~mk~ga~ivn~srg~~v 133 (223)
. +. ..+.. ..++.|+.+|+.|..--.
T Consensus 85 ~-----~~-s~~~~~~~~~~g~~vIDlSa~fR~ 111 (337)
T 3dr3_A 85 H-----EV-SHDLAPQFLEAGCVVFDLSGAFRV 111 (337)
T ss_dssp H-----HH-HHHHHHHHHHTTCEEEECSSTTSS
T ss_pred h-----HH-HHHHHHHHHHCCCEEEEcCCcccc
Confidence 2 11 12222 234678999999865433
No 448
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=96.80 E-value=0.0089 Score=51.95 Aligned_cols=97 Identities=12% Similarity=0.217 Sum_probs=69.0
Q ss_pred cCCCCCEEEEEcc--cHHHHHHHHHHccCCCeEEEEcCCC-C-Chh-------HHHhhCC--eecCCHHhhcccCCEEEE
Q 027408 32 YDLEGKTVGTVGC--GRIGKLLLQRLKPFNCNLLYHDRVK-M-DPQ-------LEKETGA--KFEEDLDTMLPKCDIVVV 98 (223)
Q Consensus 32 ~~l~g~~igIiG~--G~iG~~iA~~l~~~G~~V~~~d~~~-~-~~~-------~~~~~g~--~~~~~l~e~l~~aDvVv~ 98 (223)
..+.|.+|++||= +++.++++..+..+|++|.++.|.. . ..+ .+.+.|. ....+++|.++++|+|..
T Consensus 177 ~~l~gl~ia~vGD~~~~va~S~~~~~~~~g~~v~~~~P~~~~p~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvyt 256 (358)
T 4h31_A 177 KALADIQFAYLGDARNNVGNSLMVGAAKMGMDIRLVGPQAYWPDEELVAACQAIAKQTGGKITLTENVAEGVQGCDFLYT 256 (358)
T ss_dssp CCGGGCEEEEESCTTSHHHHHHHHHHHHHTCEEEEESCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEE
T ss_pred CCcCceEEEecCCCCcccchHHHHHHHhcCceEEEeCCcccCCCHHHHHHHHHHHHHcCCcceeccCHHHHhccCcEEEE
Confidence 4689999999995 5899999999999999999999854 2 221 1223343 456799999999999985
Q ss_pred cCCC----Chh---------hhhcccHHHHhcC-CCCcEEEEcC
Q 027408 99 NTPL----TEK---------TRGMFDKDRIAKM-KKGVLIVNNA 128 (223)
Q Consensus 99 ~~p~----~~~---------t~~~i~~~~~~~m-k~ga~ivn~s 128 (223)
-.-. .++ ...-++.+.++.+ |++++|..+.
T Consensus 257 ~~w~s~~~~~~~~~~~~~~~~~y~v~~~~l~~~ak~~~i~mH~L 300 (358)
T 4h31_A 257 DVWVSMGESPEAWDERVALMKPYQVNMNVLKQTGNPNVKFMHCL 300 (358)
T ss_dssp CCSSCTTSCTTHHHHHHHHHGGGCBCHHHHHHTTCTTCEEEECS
T ss_pred EEEEEcccCchhHHHHHHHHhCcccCHHHHHhcCCCCcEEECCC
Confidence 3321 111 1134677888764 7788888774
No 449
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=96.80 E-value=0.0011 Score=54.78 Aligned_cols=67 Identities=16% Similarity=0.178 Sum_probs=46.4
Q ss_pred CCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhH-HH--hhCCeecCCHHhhccc-CCEEEEcCC
Q 027408 35 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQL-EK--ETGAKFEEDLDTMLPK-CDIVVVNTP 101 (223)
Q Consensus 35 ~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~-~~--~~g~~~~~~l~e~l~~-aDvVv~~~p 101 (223)
.+++|.|.|.|.||+.+++.|...|++|++++|+...... .. ..++....+++++++. +|+|+.+..
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~ 72 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVHLRPEILVYCVA 72 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSCCCTTCCEEECCTTCGGGCTTGGGGCCSEEEECHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCccccccCCceEEccCCChHHHHHhhcCCCCEEEEeCC
Confidence 4678999999999999999999999999999987532110 00 0111112344556666 999987653
No 450
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=96.79 E-value=0.0099 Score=53.11 Aligned_cols=99 Identities=11% Similarity=0.121 Sum_probs=74.5
Q ss_pred ccCCCCCEEEEEcccHHHHHHHHHHccCCC---eEEEEcCCC----CChhH------------HHhhCCeecCCHHhhcc
Q 027408 31 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNC---NLLYHDRVK----MDPQL------------EKETGAKFEEDLDTMLP 91 (223)
Q Consensus 31 ~~~l~g~~igIiG~G~iG~~iA~~l~~~G~---~V~~~d~~~----~~~~~------------~~~~g~~~~~~l~e~l~ 91 (223)
++.|...+|.|.|.|..|..+|+.+...|. +|+.+|+.. ..... ++..+-....+|.|+++
T Consensus 214 gk~l~d~riV~~GAGaAGigia~ll~~~G~~~~~i~l~D~~Gli~~~R~~l~~~~~~~~k~~~A~~~n~~~~~~L~eav~ 293 (487)
T 3nv9_A 214 KKDIHECRMVFIGAGSSNTTCLRLIVTAGADPKKIVMFDSKGSLHNGREDIKKDTRFYRKWEICETTNPSKFGSIAEACV 293 (487)
T ss_dssp TCCGGGCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEETTEECCTTCHHHHHCGGGHHHHHHHHHSCTTCCCSHHHHHT
T ss_pred CCChhhcEEEEECCCHHHHHHHHHHHHcCCCcccEEEEeccccccCCcchhhhhcccHHHHHHHHhcccccCCCHHHHHh
Confidence 567899999999999999999999999998 699999862 11111 11111113458999999
Q ss_pred cCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCc
Q 027408 92 KCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAI 132 (223)
Q Consensus 92 ~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~ 132 (223)
.+|+++=+.- . ..+++.++.++.|.+..+|.-.|....
T Consensus 294 ~adVlIG~S~-~--~pg~ft~e~V~~Ma~~PIIFaLSNPtp 331 (487)
T 3nv9_A 294 GADVLISLST-P--GPGVVKAEWIKSMGEKPIVFCCANPVP 331 (487)
T ss_dssp TCSEEEECCC-S--SCCCCCHHHHHTSCSSCEEEECCSSSC
T ss_pred cCCEEEEecc-c--CCCCCCHHHHHhhcCCCEEEECCCCCc
Confidence 9997765441 0 136899999999999999998887654
No 451
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=96.78 E-value=0.0024 Score=52.74 Aligned_cols=66 Identities=12% Similarity=0.068 Sum_probs=47.4
Q ss_pred CEEEEEc-ccHHHHHHHHHHccC-CCeEEEEcCCCCChhHHHhhCCee-------cCCHHhhcccCCEEEEcCCC
Q 027408 37 KTVGTVG-CGRIGKLLLQRLKPF-NCNLLYHDRVKMDPQLEKETGAKF-------EEDLDTMLPKCDIVVVNTPL 102 (223)
Q Consensus 37 ~~igIiG-~G~iG~~iA~~l~~~-G~~V~~~d~~~~~~~~~~~~g~~~-------~~~l~e~l~~aDvVv~~~p~ 102 (223)
++|.|.| .|.||+.+++.|... |.+|.+.+|++.........++.. .++++++++.+|+|+.+...
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~ 75 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSI 75 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence 4799999 599999999999887 999999998753222112223321 23466788999999888764
No 452
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=96.77 E-value=0.0025 Score=56.94 Aligned_cols=106 Identities=15% Similarity=0.137 Sum_probs=66.4
Q ss_pred CEEEEEcccHHHHHHHHHHcc----------CCCeEE-EEcCCCCChhHHHhhCCeecCCHHhhcc--cCCEEEEcCCC-
Q 027408 37 KTVGTVGCGRIGKLLLQRLKP----------FNCNLL-YHDRVKMDPQLEKETGAKFEEDLDTMLP--KCDIVVVNTPL- 102 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~----------~G~~V~-~~d~~~~~~~~~~~~g~~~~~~l~e~l~--~aDvVv~~~p~- 102 (223)
.+|||+|+|.||+.+++.+.. .+.+|. ++|++....... ..+...++++++++. +.|+|+.++|.
T Consensus 11 irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~-~~~~~~~~d~~ell~d~diDvVve~tp~~ 89 (444)
T 3mtj_A 11 IHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEAL-AGGLPLTTNPFDVVDDPEIDIVVELIGGL 89 (444)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHH-HTTCCEESCTHHHHTCTTCCEEEECCCSS
T ss_pred ccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhh-cccCcccCCHHHHhcCCCCCEEEEcCCCc
Confidence 589999999999999887652 355654 667654211111 123455678999986 58999999994
Q ss_pred ChhhhhcccHHHHhcCCCCcEEEEcCCCCcc-CHHHHHHHHHhCCcc
Q 027408 103 TEKTRGMFDKDRIAKMKKGVLIVNNARGAIM-DTQAVVDACSSGHIA 148 (223)
Q Consensus 103 ~~~t~~~i~~~~~~~mk~ga~ivn~srg~~v-d~~al~~~L~~g~i~ 148 (223)
.+.. +-....++.|..++..-.+-.. .-..|.++.++.+..
T Consensus 90 ~~h~-----~~~~~AL~aGKhVvtenkal~a~~~~eL~~~A~~~gv~ 131 (444)
T 3mtj_A 90 EPAR-----ELVMQAIANGKHVVTANKHLVAKYGNEIFAAAQAKGVM 131 (444)
T ss_dssp TTHH-----HHHHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCC
T ss_pred hHHH-----HHHHHHHHcCCEEEECCcccCHHHHHHHHHHHHHhCCe
Confidence 2222 2234556778777755442222 235677766665554
No 453
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=96.77 E-value=0.0019 Score=56.24 Aligned_cols=133 Identities=11% Similarity=0.131 Sum_probs=82.9
Q ss_pred CEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCCCChhhhhcccHHHHh
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIA 116 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~~ 116 (223)
.++.|+|.|.+|+++++.++.+|++|+++|+.+ +.+ + .+-++.+|-++...| .+.+.
T Consensus 200 ~~L~I~GaGhva~aLa~la~~lgf~V~v~D~R~---~~~---------~-~~~fp~a~~v~~~~p----------~~~~~ 256 (362)
T 3on5_A 200 ERLIIFGAGPDVPPLVTFASNVGFYTVVTDWRP---NQC---------E-KHFFPDADEIIVDFP----------ADFLR 256 (362)
T ss_dssp EEEEEECCSTTHHHHHHHHHHHTEEEEEEESCG---GGG---------C-GGGCTTCSEEEESCH----------HHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEECCCc---ccc---------c-cccCCCceEEecCCH----------HHHHh
Confidence 479999999999999999999999999999854 111 1 112345665554444 22233
Q ss_pred c--CCCCcEEEEcCCCCccCHHHHHHHHHhCCccEEEee--------CCCCCCCCCCCCccCCCCeEEcc---CCCCCcH
Q 027408 117 K--MKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGD--------VWNPQPAPKDHPWRYMPNQAMTP---HVSGTTI 183 (223)
Q Consensus 117 ~--mk~ga~ivn~srg~~vd~~al~~~L~~g~i~~a~lD--------v~~~ep~~~~~~l~~~~nv~~tP---H~a~~t~ 183 (223)
. +.+++.+|-++++.-.|...|..+|+. ...+.++= ..+.+- .+.-+-+| -+++-|.
T Consensus 257 ~~~~~~~t~vvv~TH~h~~D~~~L~~aL~~-~~~YiG~iGSr~R~~rl~~~g~---------~~~ri~~PIGL~Iga~tP 326 (362)
T 3on5_A 257 KFLIRPDDFVLIMTHHFQKDQEILHFLLEK-ELRYIGILGSKERTRRLLQNRK---------PPDHLYSPVGLSIDAQGP 326 (362)
T ss_dssp HSCCCTTCEEEECCSCHHHHHHHHHHHSSS-CCSEEEESSCHHHHHHHHTSCC---------CCTTEESSCSCCSCCCSH
T ss_pred hcCCCCCeEEEEEeCCchhhHHHHHHHhcC-CCCEEEEeCCHHHHHHHHhcCC---------cHhheECCCCCCCCCCCH
Confidence 3 456777787888888888888877766 33333321 011110 01124455 3667666
Q ss_pred HHHHHHHHHHHHHHHHHHcCCC
Q 027408 184 DAQLRYAAGVKDMLDRYFKGED 205 (223)
Q Consensus 184 ~~~~~~~~~~~~~i~~~~~g~~ 205 (223)
+. ++..++-+|....+|++
T Consensus 327 ~E---IAvSI~AEiia~~~~~~ 345 (362)
T 3on5_A 327 EE---IAISIVAQLIQLIRSRK 345 (362)
T ss_dssp HH---HHHHHHHHHHHHHHHSC
T ss_pred HH---HHHHHHHHHHHHHhCCC
Confidence 64 55566767777777764
No 454
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=96.76 E-value=0.00085 Score=59.91 Aligned_cols=88 Identities=18% Similarity=0.134 Sum_probs=64.7
Q ss_pred CCCEEEEEcc-cHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecC---C-----------------------HH
Q 027408 35 EGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEE---D-----------------------LD 87 (223)
Q Consensus 35 ~g~~igIiG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~---~-----------------------l~ 87 (223)
.|.+|.|+|. |.+|...++.++..|++|++.++++...+.++++|+..+- + +.
T Consensus 228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~ 307 (456)
T 3krt_A 228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIR 307 (456)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHH
Confidence 6899999998 9999999999999999999888766556667777764220 1 11
Q ss_pred hhc--ccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcC
Q 027408 88 TML--PKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNA 128 (223)
Q Consensus 88 e~l--~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~s 128 (223)
++. ...|+|+-++.. . .....+..++++..++.++
T Consensus 308 ~~t~g~g~Dvvid~~G~--~----~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 308 ELTGGEDIDIVFEHPGR--E----TFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp HHHTSCCEEEEEECSCH--H----HHHHHHHHEEEEEEEEESC
T ss_pred HHhCCCCCcEEEEcCCc--h----hHHHHHHHhhCCcEEEEEe
Confidence 112 368999988872 1 1256677888888888776
No 455
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=96.76 E-value=0.0051 Score=51.39 Aligned_cols=38 Identities=21% Similarity=0.179 Sum_probs=34.5
Q ss_pred cCCCCCEEEEEcc-cHHHHHHHHHHccCCCeEEEEcCCC
Q 027408 32 YDLEGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVK 69 (223)
Q Consensus 32 ~~l~g~~igIiG~-G~iG~~iA~~l~~~G~~V~~~d~~~ 69 (223)
.++.||++.|.|. |.||+++|+.|...|++|++.+++.
T Consensus 43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~ 81 (291)
T 3ijr_A 43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDE 81 (291)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 4689999999996 8999999999999999999999865
No 456
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=96.75 E-value=0.0046 Score=52.58 Aligned_cols=68 Identities=24% Similarity=0.268 Sum_probs=45.4
Q ss_pred CCCCEEEEEcc-cHHHHHHHHHHccCCCeEEEEcCCCC-ChhHHH------hhCCee-------cCCHHhhcc--cCCEE
Q 027408 34 LEGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKM-DPQLEK------ETGAKF-------EEDLDTMLP--KCDIV 96 (223)
Q Consensus 34 l~g~~igIiG~-G~iG~~iA~~l~~~G~~V~~~d~~~~-~~~~~~------~~g~~~-------~~~l~e~l~--~aDvV 96 (223)
...++|.|.|. |.+|+.+++.|...|.+|++.+|+.. ..+... ..++.. ..++.++++ ++|+|
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~V 87 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIV 87 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEE
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEE
Confidence 34678999997 99999999999999999999999752 221111 123221 123455666 78887
Q ss_pred EEcCC
Q 027408 97 VVNTP 101 (223)
Q Consensus 97 v~~~p 101 (223)
+.+..
T Consensus 88 i~~a~ 92 (346)
T 3i6i_A 88 VSTVG 92 (346)
T ss_dssp EECCC
T ss_pred EECCc
Confidence 77665
No 457
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=96.75 E-value=0.002 Score=57.00 Aligned_cols=66 Identities=18% Similarity=0.268 Sum_probs=46.9
Q ss_pred CCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhC--CeecC---CHHhhcccCCEEEE
Q 027408 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETG--AKFEE---DLDTMLPKCDIVVV 98 (223)
Q Consensus 33 ~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g--~~~~~---~l~e~l~~aDvVv~ 98 (223)
-+.|++|+|+|-|.+|+.+++.++.+|++|+++|+++.......... ...+. .+.++++++|+|+.
T Consensus 32 ~~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~a~~~D~V~~ 102 (419)
T 4e4t_A 32 ILPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPASPAGAVADRHLRAAYDDEAALAELAGLCEAVST 102 (419)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTTCHHHHHSSEEECCCTTCHHHHHHHHHHCSEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCcCchhhhCCEEEECCcCCHHHHHHHHhcCCEEEE
Confidence 46899999999999999999999999999999998764432211100 11112 23455567898875
No 458
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=96.75 E-value=0.0074 Score=52.31 Aligned_cols=93 Identities=22% Similarity=0.306 Sum_probs=60.1
Q ss_pred CCCEEEEEc-ccHHHHHHHHHHccCC-CeEEEEcC-CCCChhHH-------HhhCCeecCCHHhhcccCCEEEEcCCCCh
Q 027408 35 EGKTVGTVG-CGRIGKLLLQRLKPFN-CNLLYHDR-VKMDPQLE-------KETGAKFEEDLDTMLPKCDIVVVNTPLTE 104 (223)
Q Consensus 35 ~g~~igIiG-~G~iG~~iA~~l~~~G-~~V~~~d~-~~~~~~~~-------~~~g~~~~~~l~e~l~~aDvVv~~~p~~~ 104 (223)
.-.+||||| .|.+|+.+.+.|.... .++..+.. +..-.... .+..+... +.+++..++|+|++|+|..
T Consensus 12 ~~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~aG~~~~~~~p~~~~~l~~~~~-~~~~~~~~~Dvvf~alp~~- 89 (351)
T 1vkn_A 12 HMIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEF-DPEKVSKNCDVLFTALPAG- 89 (351)
T ss_dssp CCEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCC-CHHHHHHHCSEEEECCSTT-
T ss_pred ceeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcccccCChHHhChhhccCceEEeC-CHHHhhcCCCEEEECCCcH-
Confidence 345899998 5999999999998764 46655543 22111111 11112222 4556667899999999932
Q ss_pred hhhhcccHHHHhcCCCCcEEEEcCCCCccCH
Q 027408 105 KTRGMFDKDRIAKMKKGVLIVNNARGAIMDT 135 (223)
Q Consensus 105 ~t~~~i~~~~~~~mk~ga~ivn~srg~~vd~ 135 (223)
+..+....+ .|+.+||.|..--.+.
T Consensus 90 -----~s~~~~~~~-~g~~VIDlSsdfRl~~ 114 (351)
T 1vkn_A 90 -----ASYDLVREL-KGVKIIDLGADFRFDD 114 (351)
T ss_dssp -----HHHHHHTTC-CSCEEEESSSTTTCSS
T ss_pred -----HHHHHHHHh-CCCEEEECChhhhCCc
Confidence 335666666 8999999997655553
No 459
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.74 E-value=0.0014 Score=55.66 Aligned_cols=89 Identities=17% Similarity=0.126 Sum_probs=60.7
Q ss_pred CCCEEEEEc-ccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeec-----CCHHh-h---c--ccCCEEEEcCCC
Q 027408 35 EGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLDT-M---L--PKCDIVVVNTPL 102 (223)
Q Consensus 35 ~g~~igIiG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~e-~---l--~~aDvVv~~~p~ 102 (223)
.|++|.|+| .|.||..+++.++..|++|++.++++...+.++++|.... .+..+ + . ...|+|+.++.
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~~g- 218 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVG- 218 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEECSC-
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEECCCccHHHHHHHHhCCCCceEEEECCc-
Confidence 589999999 7999999999999999999999987544444555554311 11211 1 1 13688877775
Q ss_pred ChhhhhcccHHHHhcCCCCcEEEEcCC
Q 027408 103 TEKTRGMFDKDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 103 ~~~t~~~i~~~~~~~mk~ga~ivn~sr 129 (223)
.. .....++.++++..++.++.
T Consensus 219 -~~----~~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 219 -RD----TWERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp -GG----GHHHHHHTEEEEEEEEECCC
T ss_pred -hH----HHHHHHHHhcCCCEEEEEec
Confidence 22 12566777787777777753
No 460
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=96.74 E-value=0.002 Score=54.73 Aligned_cols=86 Identities=14% Similarity=0.110 Sum_probs=63.3
Q ss_pred EEEEEcc-cHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhh----c-----ccCCEEEEcCCCChhhh
Q 027408 38 TVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTM----L-----PKCDIVVVNTPLTEKTR 107 (223)
Q Consensus 38 ~igIiG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~----l-----~~aDvVv~~~p~~~~t~ 107 (223)
+|.|+|. |.+|...++.++..|++|++.++++...+.++++|...+-+..+. + ...|+|+-++.. +
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vid~~g~-~--- 228 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVGG-K--- 228 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESCCT-H---
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEECCCchHHHHHHhhcCCccEEEECCcH-H---
Confidence 7999998 999999999999999999999988766777777776432222221 1 246888888762 2
Q ss_pred hcccHHHHhcCCCCcEEEEcCC
Q 027408 108 GMFDKDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 108 ~~i~~~~~~~mk~ga~ivn~sr 129 (223)
.-.+.++.++++..++.++.
T Consensus 229 --~~~~~~~~l~~~G~iv~~G~ 248 (330)
T 1tt7_A 229 --QLASLLSKIQYGGSVAVSGL 248 (330)
T ss_dssp --HHHHHHTTEEEEEEEEECCC
T ss_pred --HHHHHHHhhcCCCEEEEEec
Confidence 12567788888888887764
No 461
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=96.73 E-value=0.0015 Score=55.93 Aligned_cols=89 Identities=18% Similarity=0.135 Sum_probs=58.2
Q ss_pred CCCEEEEEcc-cHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeec-----CCHHh----hc--ccCCEEEEcCCC
Q 027408 35 EGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLDT----ML--PKCDIVVVNTPL 102 (223)
Q Consensus 35 ~g~~igIiG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~e----~l--~~aDvVv~~~p~ 102 (223)
.|++|.|+|. |.+|..+++.++..|++|++.++++...+.++++|.... .++.+ +. ...|+|+.++.
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g- 244 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGADKVVDHTG- 244 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTSTTHHHHHHHHTTTTCEEEEEESSC-
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECCC-
Confidence 5899999999 999999999999999999999987544444555554211 11111 11 14577766665
Q ss_pred ChhhhhcccHHHHhcCCCCcEEEEcCC
Q 027408 103 TEKTRGMFDKDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 103 ~~~t~~~i~~~~~~~mk~ga~ivn~sr 129 (223)
.+ .....++.++++..++.++.
T Consensus 245 ~~-----~~~~~~~~l~~~G~~v~~g~ 266 (343)
T 2eih_A 245 AL-----YFEGVIKATANGGRIAIAGA 266 (343)
T ss_dssp SS-----SHHHHHHHEEEEEEEEESSC
T ss_pred HH-----HHHHHHHhhccCCEEEEEec
Confidence 11 12455566666666666653
No 462
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=96.73 E-value=0.002 Score=54.51 Aligned_cols=38 Identities=26% Similarity=0.342 Sum_probs=33.7
Q ss_pred cCCCCCEEEEEcccHHHHHHHHHHccCCC-eEEEEcCCC
Q 027408 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVK 69 (223)
Q Consensus 32 ~~l~g~~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~~ 69 (223)
..|.+++|.|||+|.+|..+|+.|...|. ++.++|...
T Consensus 32 ~kL~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 32 EKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp CGGGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred HHHhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 46899999999999999999999998886 688888754
No 463
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=96.73 E-value=0.0012 Score=56.54 Aligned_cols=89 Identities=16% Similarity=0.109 Sum_probs=63.0
Q ss_pred CCCEEEEEc-ccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeec---CCHHhhc------ccCCEEEEcCCCCh
Q 027408 35 EGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE---EDLDTML------PKCDIVVVNTPLTE 104 (223)
Q Consensus 35 ~g~~igIiG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~---~~l~e~l------~~aDvVv~~~p~~~ 104 (223)
.|++|.|+| .|.+|...++.++..|++|++. .++...+.++++|...+ .++.+.+ ...|+|+-++.. +
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lGa~~i~~~~~~~~~~~~~~~~~g~D~vid~~g~-~ 227 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLGATPIDASREPEDYAAEHTAGQGFDLVYDTLGG-P 227 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHTSEEEETTSCHHHHHHHHHTTSCEEEEEESSCT-H
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcCCCEeccCCCHHHHHHHHhcCCCceEEEECCCc-H
Confidence 689999999 7999999999999999999988 55544556666776432 1222222 257888887762 1
Q ss_pred hhhhcccHHHHhcCCCCcEEEEcCCC
Q 027408 105 KTRGMFDKDRIAKMKKGVLIVNNARG 130 (223)
Q Consensus 105 ~t~~~i~~~~~~~mk~ga~ivn~srg 130 (223)
.....++.++++..++.++..
T Consensus 228 -----~~~~~~~~l~~~G~iv~~g~~ 248 (343)
T 3gaz_A 228 -----VLDASFSAVKRFGHVVSCLGW 248 (343)
T ss_dssp -----HHHHHHHHEEEEEEEEESCCC
T ss_pred -----HHHHHHHHHhcCCeEEEEccc
Confidence 125667778888888877543
No 464
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=96.73 E-value=0.0022 Score=52.97 Aligned_cols=38 Identities=21% Similarity=0.058 Sum_probs=34.2
Q ss_pred CCCCCEEEEEcc---cHHHHHHHHHHccCCCeEEEEcCCCC
Q 027408 33 DLEGKTVGTVGC---GRIGKLLLQRLKPFNCNLLYHDRVKM 70 (223)
Q Consensus 33 ~l~g~~igIiG~---G~iG~~iA~~l~~~G~~V~~~d~~~~ 70 (223)
.+.||++.|.|. |.||+.+|+.|...|++|++.+|+..
T Consensus 3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~ 43 (275)
T 2pd4_A 3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES 43 (275)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 478999999997 69999999999999999999998763
No 465
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=96.73 E-value=0.0018 Score=55.74 Aligned_cols=97 Identities=16% Similarity=0.186 Sum_probs=59.6
Q ss_pred CCCEEEEEcc-cHHHHHHHHHHccCCCeEEEEcCCCCCh--hHHHh-hCCee-----c---CCHHhhcccCCEEEEcCCC
Q 027408 35 EGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDP--QLEKE-TGAKF-----E---EDLDTMLPKCDIVVVNTPL 102 (223)
Q Consensus 35 ~g~~igIiG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~--~~~~~-~g~~~-----~---~~l~e~l~~aDvVv~~~p~ 102 (223)
.+++|.|.|. |.+|+.+++.|...|++|++.+|+.... +.... .++.. . .++.++++.+|+|+.++..
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~ 83 (352)
T 1xgk_A 4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS 83 (352)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCC
Confidence 4688999995 9999999999998999999999876443 11111 12211 1 2355678899999876653
Q ss_pred ChhhhhcccHHHHhcCCC-C--cEEEEcCCCC
Q 027408 103 TEKTRGMFDKDRIAKMKK-G--VLIVNNARGA 131 (223)
Q Consensus 103 ~~~t~~~i~~~~~~~mk~-g--a~ivn~srg~ 131 (223)
............+..+++ + ..+|++|...
T Consensus 84 ~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~ 115 (352)
T 1xgk_A 84 QAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD 115 (352)
T ss_dssp TTSCHHHHHHHHHHHHHHHSCCSEEEEEECCC
T ss_pred CCcHHHHHHHHHHHHHHHcCCccEEEEeCCcc
Confidence 211111222334433322 2 4677777653
No 466
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=96.71 E-value=0.0018 Score=57.64 Aligned_cols=112 Identities=14% Similarity=0.152 Sum_probs=69.5
Q ss_pred CCCCCEEEEEcccHHHHHHHHHHccCCCeEEEEcCCCCCh--hHHHhhCCeec--CCHHhhcccCCEEEEcCC---CChh
Q 027408 33 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDP--QLEKETGAKFE--EDLDTMLPKCDIVVVNTP---LTEK 105 (223)
Q Consensus 33 ~l~g~~igIiG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~--~~~~~~g~~~~--~~l~e~l~~aDvVv~~~p---~~~~ 105 (223)
++.+|+|.|||.|..|.+.|+.|+..|++|.++|...... ...+ .|+... ....+.+..+|.|++... .+|.
T Consensus 2 ~~~~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~~~~l~-~G~~~~~g~~~~~~~~~~d~vV~s~gi~~~~p~ 80 (439)
T 2x5o_A 2 DYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLP-EAVERHTGSLNDEWLMAADLIVASPGIALAHPS 80 (439)
T ss_dssp CCTTCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTTGGGSC-TTSCEEESSCCHHHHHTCSEEEECTTSCTTCHH
T ss_pred CCCCCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcchhHHhh-CCCEEEECCCcHHHhccCCEEEeCCCCCCCCHH
Confidence 3678999999999999999999999999999999765332 2223 455432 112455668999988742 2232
Q ss_pred hhh-------cccH-HHH-hcCCCCcEEEEcCCCCccCHHHHHHHHHhC
Q 027408 106 TRG-------MFDK-DRI-AKMKKGVLIVNNARGAIMDTQAVVDACSSG 145 (223)
Q Consensus 106 t~~-------~i~~-~~~-~~mk~ga~ivn~srg~~vd~~al~~~L~~g 145 (223)
... ++.+ +.+ ..++...+-|--+.|+--...-|...|++.
T Consensus 81 ~~~a~~~~~~v~~~~~~~~~~~~~~vI~VTGTnGKTTT~~ml~~iL~~~ 129 (439)
T 2x5o_A 81 LSAAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVTTLVGEMAKAA 129 (439)
T ss_dssp HHHHHHTTCEEECHHHHHHHHCCSCEEEEECSSSHHHHHHHHHHHHHHT
T ss_pred HHHHHHCCCcEEEHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhc
Confidence 221 2222 112 224433444555567766555566666654
No 467
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=96.70 E-value=0.0019 Score=55.66 Aligned_cols=89 Identities=12% Similarity=0.059 Sum_probs=60.6
Q ss_pred CCCEEEEEc-ccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeec-----CCHHh----hc--ccCCEEEEcCCC
Q 027408 35 EGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLDT----ML--PKCDIVVVNTPL 102 (223)
Q Consensus 35 ~g~~igIiG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~e----~l--~~aDvVv~~~p~ 102 (223)
.|++|.|+| .|.||..+++.++..|++|++.++++...+.++++|.... .+..+ .. ...|+|+.++..
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~G~ 241 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGG 241 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCG
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChHHHHHHHHHhcCCCceEEEECCCc
Confidence 589999999 7999999999999999999999987544445555554321 11111 11 146888777752
Q ss_pred ChhhhhcccHHHHhcCCCCcEEEEcCC
Q 027408 103 TEKTRGMFDKDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 103 ~~~t~~~i~~~~~~~mk~ga~ivn~sr 129 (223)
+ .....++.++++..++.++.
T Consensus 242 -~-----~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 242 -S-----YWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp -G-----GHHHHHHHEEEEEEEEECCC
T ss_pred -h-----HHHHHHHhccCCCEEEEEec
Confidence 1 12455677777777777753
No 468
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=96.70 E-value=0.0015 Score=53.77 Aligned_cols=64 Identities=16% Similarity=0.280 Sum_probs=45.5
Q ss_pred EEEEEcc-cHHHHHHHHHHccC--CCeEEEEcCCCCChhHHHhhCCee-------cCCHHhhcccCCEEEEcCC
Q 027408 38 TVGTVGC-GRIGKLLLQRLKPF--NCNLLYHDRVKMDPQLEKETGAKF-------EEDLDTMLPKCDIVVVNTP 101 (223)
Q Consensus 38 ~igIiG~-G~iG~~iA~~l~~~--G~~V~~~d~~~~~~~~~~~~g~~~-------~~~l~e~l~~aDvVv~~~p 101 (223)
+|.|.|. |.||+.+++.|... |++|.+.+|++...+.....++.. .++++++++++|+|+.+..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~ 74 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISS 74 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC-
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCC
Confidence 4789996 99999999999987 999999998764332222223321 1345677889999987765
No 469
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=96.69 E-value=0.0011 Score=57.19 Aligned_cols=88 Identities=14% Similarity=0.171 Sum_probs=49.6
Q ss_pred CEEEEEc-ccHHHHHHHHHHccC---CCeEEEEc-CCCCChhH-HHhhCCeecCCHH-hhcccCCEEEEcCCCChhhhhc
Q 027408 37 KTVGTVG-CGRIGKLLLQRLKPF---NCNLLYHD-RVKMDPQL-EKETGAKFEEDLD-TMLPKCDIVVVNTPLTEKTRGM 109 (223)
Q Consensus 37 ~~igIiG-~G~iG~~iA~~l~~~---G~~V~~~d-~~~~~~~~-~~~~g~~~~~~l~-e~l~~aDvVv~~~p~~~~t~~~ 109 (223)
.+|+|+| .|.+|+.+.+.|... ..++.++. ++...... .....+.. .+++ +.+.++|+|+.|+|.....
T Consensus 4 ~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~~~~~~i~~-~~~~~~~~~~vDvVf~a~g~~~s~--- 79 (336)
T 2r00_A 4 FNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYRFNGKTVRV-QNVEEFDWSQVHIALFSAGGELSA--- 79 (336)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEEETTEEEEE-EEGGGCCGGGCSEEEECSCHHHHH---
T ss_pred cEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCceeecCceeEE-ecCChHHhcCCCEEEECCCchHHH---
Confidence 5899999 999999999998765 34666554 32210100 00001111 1111 2346899999999932111
Q ss_pred ccHHHHhcCCCCcEEEEcCCC
Q 027408 110 FDKDRIAKMKKGVLIVNNARG 130 (223)
Q Consensus 110 i~~~~~~~mk~ga~ivn~srg 130 (223)
+..-..++.|+.+|+.+..
T Consensus 80 --~~a~~~~~~G~~vId~s~~ 98 (336)
T 2r00_A 80 --KWAPIAAEAGVVVIDNTSH 98 (336)
T ss_dssp --HHHHHHHHTTCEEEECSST
T ss_pred --HHHHHHHHcCCEEEEcCCc
Confidence 1111223567888887743
No 470
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=96.67 E-value=0.0058 Score=54.43 Aligned_cols=84 Identities=15% Similarity=0.179 Sum_probs=61.4
Q ss_pred CCCCCEEEEEccc----------HHHHHHHHHHccC-CCeEEEEcCCCCChhHHHhhCCeecCCHHhhcccCCEEEEcCC
Q 027408 33 DLEGKTVGTVGCG----------RIGKLLLQRLKPF-NCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTP 101 (223)
Q Consensus 33 ~l~g~~igIiG~G----------~iG~~iA~~l~~~-G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~aDvVv~~~p 101 (223)
.+.|++|+|+|+- .-...+++.|... |.+|.+|||.-... ....++++.++++|+|+++++
T Consensus 312 ~~~~~~v~vlGlafK~~tdD~ReSpa~~i~~~L~~~~g~~V~~~DP~~~~~--------~~~~~~~~~~~~ad~vvi~t~ 383 (431)
T 3ojo_A 312 ALSGNKVTVFGLTYKGDVDDIRESPAFDIYELLNQEPDIEVCAYDPHVELD--------FVEHDMSHAVKDASLVLILSD 383 (431)
T ss_dssp HSSCCEEEEECCCSSTTSCCCTTCHHHHHHHHHHHSTTCEEEEECSSCCCT--------TBCSTTHHHHTTCSEEEECSC
T ss_pred hcCCCEEEEEeeeeCCCCcchhcChHHHHHHHHHhhcCCEEEEECCCcccc--------cccCCHHHHHhCCCEEEEecC
Confidence 4799999999963 3468899999998 99999999965321 234678999999999999987
Q ss_pred CChhhhhcccHHHHhcCCCCcEEEEc
Q 027408 102 LTEKTRGMFDKDRIAKMKKGVLIVNN 127 (223)
Q Consensus 102 ~~~~t~~~i~~~~~~~mk~ga~ivn~ 127 (223)
-. +.+. ++.+.++.|+ ..+|+|.
T Consensus 384 ~~-~f~~-~d~~~~~~~~-~~~i~D~ 406 (431)
T 3ojo_A 384 HS-EFKN-LSDSHFDKMK-HKVIFDT 406 (431)
T ss_dssp CG-GGTS-CCGGGGTTCS-SCEEEES
T ss_pred CH-HHhc-cCHHHHHhCC-CCEEEEC
Confidence 32 2222 2333446666 5678876
No 471
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=96.63 E-value=0.0053 Score=51.98 Aligned_cols=65 Identities=17% Similarity=0.212 Sum_probs=43.0
Q ss_pred CEEEEEc-ccHHHHHHHHHHccCCC--eEEEEcC--CCCChhH-HHhh--------CCeecCCHHhhcccCCEEEEcCC
Q 027408 37 KTVGTVG-CGRIGKLLLQRLKPFNC--NLLYHDR--VKMDPQL-EKET--------GAKFEEDLDTMLPKCDIVVVNTP 101 (223)
Q Consensus 37 ~~igIiG-~G~iG~~iA~~l~~~G~--~V~~~d~--~~~~~~~-~~~~--------g~~~~~~l~e~l~~aDvVv~~~p 101 (223)
+||+|+| .|.+|..++..|...|. ++..+|+ .....+. ..++ .+....+..+.++++|+|+++..
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVi~~ag 79 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTAGSDVVVITAG 79 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGTTCSEEEECCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeCCHHHhCCCCEEEEcCC
Confidence 5899999 99999999999976665 6888998 4311110 1110 11111122567899999999875
No 472
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=96.61 E-value=0.0017 Score=55.05 Aligned_cols=86 Identities=16% Similarity=0.133 Sum_probs=59.7
Q ss_pred EEEEEcc-cHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeec---CCH-Hhhc-----ccCCEEEEcCCCChhhh
Q 027408 38 TVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE---EDL-DTML-----PKCDIVVVNTPLTEKTR 107 (223)
Q Consensus 38 ~igIiG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~---~~l-~e~l-----~~aDvVv~~~p~~~~t~ 107 (223)
+|.|+|. |.+|...++.++..|++|++.++++...+.++++|...+ .+. .+.+ ...|+|+-++.. +
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~~g~-~--- 227 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGG-R--- 227 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECSTT-T---
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcEEEecCCcHHHHHHHhcCCcccEEEECCcH-H---
Confidence 7999998 999999999999999999999988766777777775321 111 1111 236777777652 1
Q ss_pred hcccHHHHhcCCCCcEEEEcCC
Q 027408 108 GMFDKDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 108 ~~i~~~~~~~mk~ga~ivn~sr 129 (223)
.....++.++++..++.++.
T Consensus 228 --~~~~~~~~l~~~G~~v~~G~ 247 (328)
T 1xa0_A 228 --TLATVLSRMRYGGAVAVSGL 247 (328)
T ss_dssp --THHHHHHTEEEEEEEEECSC
T ss_pred --HHHHHHHhhccCCEEEEEee
Confidence 12566777777777777653
No 473
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=96.60 E-value=0.0034 Score=52.62 Aligned_cols=38 Identities=16% Similarity=0.101 Sum_probs=33.9
Q ss_pred cCCCCCEEEEEcc-cH--HHHHHHHHHccCCCeEEEEcCCC
Q 027408 32 YDLEGKTVGTVGC-GR--IGKLLLQRLKPFNCNLLYHDRVK 69 (223)
Q Consensus 32 ~~l~g~~igIiG~-G~--iG~~iA~~l~~~G~~V~~~d~~~ 69 (223)
..+.||++.|.|. |. ||+++|+.|...|++|++.+++.
T Consensus 27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~ 67 (293)
T 3grk_A 27 GLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGD 67 (293)
T ss_dssp CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSH
T ss_pred ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4689999999997 45 99999999999999999999864
No 474
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=96.60 E-value=0.0018 Score=55.07 Aligned_cols=88 Identities=9% Similarity=0.151 Sum_probs=56.6
Q ss_pred CCCEEEEEcc-cHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeec-----CCHHh----hc--ccCCEEEEcCCC
Q 027408 35 EGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLDT----ML--PKCDIVVVNTPL 102 (223)
Q Consensus 35 ~g~~igIiG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~e----~l--~~aDvVv~~~p~ 102 (223)
.|++|.|+|. |.||..+++.++..|++|++.+++....+.++++|.... .+..+ .. ...|+|+.++..
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~~~~~~d~vi~~~g~ 224 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGK 224 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEECSCT
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCCHHHHHHHHHHhCCCCCeEEEECCcH
Confidence 5889999995 999999999999999999999987533344444553211 11111 11 135766666652
Q ss_pred ChhhhhcccHHHHhcCCCCcEEEEcC
Q 027408 103 TEKTRGMFDKDRIAKMKKGVLIVNNA 128 (223)
Q Consensus 103 ~~~t~~~i~~~~~~~mk~ga~ivn~s 128 (223)
......++.++++..++.++
T Consensus 225 ------~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 225 ------DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp ------TTHHHHHHTEEEEEEEEECC
T ss_pred ------HHHHHHHHhhccCCEEEEEe
Confidence 11245566666666666664
No 475
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=96.59 E-value=0.0013 Score=55.83 Aligned_cols=72 Identities=13% Similarity=0.078 Sum_probs=46.5
Q ss_pred ccCCCCCEEEEEcc-cHHHHHHHHHHccCCCeEEEEcCCCCChhH-HHhhCCeecCCHHhhcccCCEEEEcCCC
Q 027408 31 AYDLEGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQL-EKETGAKFEEDLDTMLPKCDIVVVNTPL 102 (223)
Q Consensus 31 ~~~l~g~~igIiG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~-~~~~g~~~~~~l~e~l~~aDvVv~~~p~ 102 (223)
..++.+|+|.|.|. |.||+.+++.|...|++|++.+|+...... ....++....+++++++.+|+|+-+...
T Consensus 14 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~ 87 (347)
T 4id9_A 14 LVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSGTGGEEVVGSLEDGQALSDAIMGVSAVLHLGAF 87 (347)
T ss_dssp -------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSEEESCTTCHHHHHHHHTTCSEEEECCCC
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCCCccEEecCcCCHHHHHHHHhCCCEEEECCcc
Confidence 45789999999997 999999999999999999999987532100 0001111223456778899999877653
No 476
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=96.58 E-value=0.0019 Score=55.58 Aligned_cols=88 Identities=14% Similarity=0.143 Sum_probs=58.1
Q ss_pred CCCEEEEEcc-cHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeec-----CCHHhh----cc--cCCEEEEcCCC
Q 027408 35 EGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLDTM----LP--KCDIVVVNTPL 102 (223)
Q Consensus 35 ~g~~igIiG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~e~----l~--~aDvVv~~~p~ 102 (223)
.|++|.|.|. |.+|..+++.++..|++|++.++++...+.++++|.... .+..+. .. ..|+|+.++..
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~G~ 249 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLAN 249 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTCEEEEEESCHH
T ss_pred CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCCEEEeCCCchHHHHHHHHcCCCCcEEEEECCCh
Confidence 5899999998 999999999999999999999987544445555554311 111111 11 46777766541
Q ss_pred ChhhhhcccHHHHhcCCCCcEEEEcC
Q 027408 103 TEKTRGMFDKDRIAKMKKGVLIVNNA 128 (223)
Q Consensus 103 ~~~t~~~i~~~~~~~mk~ga~ivn~s 128 (223)
. . ....++.++++..++.++
T Consensus 250 --~---~-~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 250 --V---N-LSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp --H---H-HHHHHHHEEEEEEEEECC
T ss_pred --H---H-HHHHHHhccCCCEEEEEe
Confidence 1 1 145566677777776665
No 477
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=96.58 E-value=0.0022 Score=55.27 Aligned_cols=31 Identities=23% Similarity=0.387 Sum_probs=25.0
Q ss_pred CEEEEEcccHHHHHHHHHHccC---CCeEEEEcC
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPF---NCNLLYHDR 67 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~---G~~V~~~d~ 67 (223)
.+|||+|+|.||+.+.+.+... .++|.+++.
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~ 34 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAIND 34 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEc
Confidence 4799999999999999998654 578775543
No 478
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=96.57 E-value=0.0036 Score=51.97 Aligned_cols=67 Identities=19% Similarity=0.214 Sum_probs=46.7
Q ss_pred CCEEEEEcc-cHHHHHHHHHHccCCCeEEEEcCCC-CC--h-hHH------HhhCCee-------cCCHHhhcccCCEEE
Q 027408 36 GKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVK-MD--P-QLE------KETGAKF-------EEDLDTMLPKCDIVV 97 (223)
Q Consensus 36 g~~igIiG~-G~iG~~iA~~l~~~G~~V~~~d~~~-~~--~-~~~------~~~g~~~-------~~~l~e~l~~aDvVv 97 (223)
+++|.|.|. |.+|+.+++.|...|++|.+.+|+. .. . +.. ...++.. .+++.++++.+|+|+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi 81 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI 81 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence 578999996 9999999999998899999999865 11 1 111 1223321 124556677889888
Q ss_pred EcCCC
Q 027408 98 VNTPL 102 (223)
Q Consensus 98 ~~~p~ 102 (223)
.+.+.
T Consensus 82 ~~a~~ 86 (307)
T 2gas_A 82 CAAGR 86 (307)
T ss_dssp ECSSS
T ss_pred ECCcc
Confidence 77763
No 479
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=96.57 E-value=0.0027 Score=53.36 Aligned_cols=69 Identities=14% Similarity=0.083 Sum_probs=48.9
Q ss_pred CCCCCEEEEEcc-cHHHHHHHHHHccCCCeEEEEcCCCCChhH-HHh------hCCe--------ecCCHHhhcccCCEE
Q 027408 33 DLEGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQL-EKE------TGAK--------FEEDLDTMLPKCDIV 96 (223)
Q Consensus 33 ~l~g~~igIiG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~-~~~------~g~~--------~~~~l~e~l~~aDvV 96 (223)
.+.+++|.|.|. |.||+.+++.|...|++|++.+|+....+. ... .++. ...+++++++.+|+|
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 87 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGV 87 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEE
Confidence 468999999997 999999999999999999999986422111 110 1121 123455667789999
Q ss_pred EEcCC
Q 027408 97 VVNTP 101 (223)
Q Consensus 97 v~~~p 101 (223)
+-+..
T Consensus 88 ih~A~ 92 (342)
T 1y1p_A 88 AHIAS 92 (342)
T ss_dssp EECCC
T ss_pred EEeCC
Confidence 87764
No 480
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=96.55 E-value=0.0048 Score=52.82 Aligned_cols=66 Identities=20% Similarity=0.178 Sum_probs=46.7
Q ss_pred CCEEEEEcc-cHHHHHHHHHHccCCC-------eEEEEcCC----CCChh-----HHHh-h----CCeecCCHHhhcccC
Q 027408 36 GKTVGTVGC-GRIGKLLLQRLKPFNC-------NLLYHDRV----KMDPQ-----LEKE-T----GAKFEEDLDTMLPKC 93 (223)
Q Consensus 36 g~~igIiG~-G~iG~~iA~~l~~~G~-------~V~~~d~~----~~~~~-----~~~~-~----g~~~~~~l~e~l~~a 93 (223)
.+||+|+|. |.+|+.++..|...|+ +|..+|+. ....+ +... . .+....++.+.+++|
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFKDA 84 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHHTTTC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHHhCCC
Confidence 468999997 9999999999987775 79999986 21011 1110 0 112236788999999
Q ss_pred CEEEEcCC
Q 027408 94 DIVVVNTP 101 (223)
Q Consensus 94 DvVv~~~p 101 (223)
|+|+.+..
T Consensus 85 D~Vi~~ag 92 (329)
T 1b8p_A 85 DVALLVGA 92 (329)
T ss_dssp SEEEECCC
T ss_pred CEEEEeCC
Confidence 99998764
No 481
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=96.54 E-value=0.012 Score=50.60 Aligned_cols=88 Identities=13% Similarity=0.184 Sum_probs=60.9
Q ss_pred CCCEEEEEcc-cHHHHHHHHHHccCCCeEEEEcCCCCC----hhHHHhhCCeecCC--------HHhhcc---cCCEEEE
Q 027408 35 EGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMD----PQLEKETGAKFEED--------LDTMLP---KCDIVVV 98 (223)
Q Consensus 35 ~g~~igIiG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~----~~~~~~~g~~~~~~--------l~e~l~---~aDvVv~ 98 (223)
.|.+|.|+|. |.+|...++.++.+|+++++...+... .+.++++|...+-+ +.++.. ..|+|+-
T Consensus 167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~~Dvvid 246 (357)
T 1zsy_A 167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALN 246 (357)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHHSGGGGGTTSSSCCCSEEEE
T ss_pred CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCcchHHHHHHHHhCCCCceEEEE
Confidence 6899999998 999999999999999987665543322 24556777643212 222222 3799998
Q ss_pred cCCCChhhhhcccHHHHhcCCCCcEEEEcC
Q 027408 99 NTPLTEKTRGMFDKDRIAKMKKGVLIVNNA 128 (223)
Q Consensus 99 ~~p~~~~t~~~i~~~~~~~mk~ga~ivn~s 128 (223)
++. .+.+ .+.++.++++..++.++
T Consensus 247 ~~g-~~~~-----~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 247 CVG-GKSS-----TELLRQLARGGTMVTYG 270 (357)
T ss_dssp SSC-HHHH-----HHHHTTSCTTCEEEECC
T ss_pred CCC-cHHH-----HHHHHhhCCCCEEEEEe
Confidence 886 1221 35688899998888875
No 482
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=96.53 E-value=0.0027 Score=54.84 Aligned_cols=30 Identities=23% Similarity=0.287 Sum_probs=24.4
Q ss_pred CEEEEEcccHHHHHHHHHHccC---CCeEEEEc
Q 027408 37 KTVGTVGCGRIGKLLLQRLKPF---NCNLLYHD 66 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~~---G~~V~~~d 66 (223)
.+|||+|+|+||+.+.+.+... +++|.+++
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaIn 35 (339)
T 3b1j_A 3 IRVAINGFGRIGRNFLRCWFGRQNTDLEVVAIN 35 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEE
T ss_pred eEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEe
Confidence 3899999999999999998754 36776554
No 483
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=96.53 E-value=0.003 Score=54.52 Aligned_cols=93 Identities=14% Similarity=0.196 Sum_probs=62.5
Q ss_pred cCCCCCEEEEEcccHHHHHHHHHHccCCC-eEEEEcCCCCC-------------------hhHH-H---hh--CC--eec
Q 027408 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMD-------------------PQLE-K---ET--GA--KFE 83 (223)
Q Consensus 32 ~~l~g~~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~-------------------~~~~-~---~~--g~--~~~ 83 (223)
..|.+++|.|||+|.+|..+|+.|...|. ++.++|..... .+.+ + +. ++ ...
T Consensus 30 ~kL~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~ 109 (340)
T 3rui_A 30 DIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV 109 (340)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHHhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEE
Confidence 36899999999999999999999999997 58888874310 0111 1 11 11 111
Q ss_pred ---------------------CCHHhhcccCCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcC
Q 027408 84 ---------------------EDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNA 128 (223)
Q Consensus 84 ---------------------~~l~e~l~~aDvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~s 128 (223)
.++.++++++|+|+.++- +.+++..++...... +..+|+.+
T Consensus 110 ~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tD-n~~tR~lin~~c~~~---~~plI~aa 171 (340)
T 3rui_A 110 KLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD-SRESRWLPSLLSNIE---NKTVINAA 171 (340)
T ss_dssp CCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCS-STGGGHHHHHHHHHT---TCEEEEEE
T ss_pred eccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCC-CHHHHHHHHHHHHHc---CCcEEEee
Confidence 124577889999987765 566777777665543 34566654
No 484
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=96.52 E-value=0.0064 Score=51.18 Aligned_cols=66 Identities=15% Similarity=0.162 Sum_probs=46.7
Q ss_pred CCEEEEEcc-cHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCee-------cCCHHhhcccCCEEEEcCC
Q 027408 36 GKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKF-------EEDLDTMLPKCDIVVVNTP 101 (223)
Q Consensus 36 g~~igIiG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~-------~~~l~e~l~~aDvVv~~~p 101 (223)
.++|.|.|. |.||+.+++.|...|++|++++|+....+.....++.. ..+++++++.+|+|+.+..
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~ 86 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAG 86 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC--
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence 368999995 99999999999999999999998764332222223321 1245567888999987765
No 485
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=96.51 E-value=0.0027 Score=54.57 Aligned_cols=89 Identities=18% Similarity=0.176 Sum_probs=60.2
Q ss_pred CC--CEEEEEcc-cHHHHHHHHHHccCCC-eEEEEcCCCCChhHHHh-hCCeec-----CCHHhhcc-----cCCEEEEc
Q 027408 35 EG--KTVGTVGC-GRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKE-TGAKFE-----EDLDTMLP-----KCDIVVVN 99 (223)
Q Consensus 35 ~g--~~igIiG~-G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~-~g~~~~-----~~l~e~l~-----~aDvVv~~ 99 (223)
.| ++|.|.|. |.||..+++.++..|+ +|++.+++....+...+ +|.... .+..+.+. ..|+|+.+
T Consensus 158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~d~vi~~ 237 (357)
T 2zb4_A 158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGVDVYFDN 237 (357)
T ss_dssp TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTTSCHHHHHHHHCTTCEEEEEES
T ss_pred CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCchHHHHHHHHhcCCCCCEEEEC
Confidence 46 89999998 9999999999999999 99999986533344443 554211 12222221 36888777
Q ss_pred CCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 027408 100 TPLTEKTRGMFDKDRIAKMKKGVLIVNNAR 129 (223)
Q Consensus 100 ~p~~~~t~~~i~~~~~~~mk~ga~ivn~sr 129 (223)
+. . ......++.++++..++.++.
T Consensus 238 ~G--~----~~~~~~~~~l~~~G~iv~~G~ 261 (357)
T 2zb4_A 238 VG--G----NISDTVISQMNENSHIILCGQ 261 (357)
T ss_dssp CC--H----HHHHHHHHTEEEEEEEEECCC
T ss_pred CC--H----HHHHHHHHHhccCcEEEEECC
Confidence 75 1 122566777888777777754
No 486
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=96.50 E-value=0.0062 Score=50.54 Aligned_cols=37 Identities=19% Similarity=0.161 Sum_probs=33.8
Q ss_pred CCCCCEEEEEcc---cHHHHHHHHHHccCCCeEEEEcCCC
Q 027408 33 DLEGKTVGTVGC---GRIGKLLLQRLKPFNCNLLYHDRVK 69 (223)
Q Consensus 33 ~l~g~~igIiG~---G~iG~~iA~~l~~~G~~V~~~d~~~ 69 (223)
.+.||++.|.|. |.||+.+|+.|...|++|++.+|+.
T Consensus 18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~ 57 (285)
T 2p91_A 18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATP 57 (285)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCH
Confidence 488999999997 5999999999999999999999865
No 487
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=96.50 E-value=0.019 Score=47.43 Aligned_cols=39 Identities=15% Similarity=0.092 Sum_probs=34.1
Q ss_pred ccCCCCCEEEEEcc-cH--HHHHHHHHHccCCCeEEEEcCCC
Q 027408 31 AYDLEGKTVGTVGC-GR--IGKLLLQRLKPFNCNLLYHDRVK 69 (223)
Q Consensus 31 ~~~l~g~~igIiG~-G~--iG~~iA~~l~~~G~~V~~~d~~~ 69 (223)
...+.||++.|.|. |. ||+++|+.|...|++|++.+++.
T Consensus 21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~ 62 (280)
T 3nrc_A 21 MGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ 62 (280)
T ss_dssp -CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT
T ss_pred ccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch
Confidence 45789999999996 45 99999999999999999999875
No 488
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=96.49 E-value=0.0016 Score=60.18 Aligned_cols=37 Identities=16% Similarity=0.285 Sum_probs=33.1
Q ss_pred cCCCCCEEEEEcccHHHHHHHHHHccCCC-eEEEEcCC
Q 027408 32 YDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRV 68 (223)
Q Consensus 32 ~~l~g~~igIiG~G~iG~~iA~~l~~~G~-~V~~~d~~ 68 (223)
..|.+++|.|||+|.+|..+|+.|...|. ++.++|..
T Consensus 323 ~kL~~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D 360 (598)
T 3vh1_A 323 DIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 360 (598)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCS
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 46889999999999999999999999998 58888754
No 489
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=96.49 E-value=0.0036 Score=51.49 Aligned_cols=66 Identities=15% Similarity=0.234 Sum_probs=47.5
Q ss_pred CEEEEEcc-cHHHHHHHHHHccC--CCeEEEEcCCCCChhHHHhhCCee-------cCCHHhhcccCCEEEEcCCC
Q 027408 37 KTVGTVGC-GRIGKLLLQRLKPF--NCNLLYHDRVKMDPQLEKETGAKF-------EEDLDTMLPKCDIVVVNTPL 102 (223)
Q Consensus 37 ~~igIiG~-G~iG~~iA~~l~~~--G~~V~~~d~~~~~~~~~~~~g~~~-------~~~l~e~l~~aDvVv~~~p~ 102 (223)
|+|.|.|. |.||+.+++.|... |++|.+.+|+....+.....++.. ..+++++++++|+|+.+...
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~ 76 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGP 76 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCC
Confidence 57899996 99999999999988 999999998764332222223321 13456778899999877653
No 490
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=96.49 E-value=0.0034 Score=52.40 Aligned_cols=65 Identities=11% Similarity=0.178 Sum_probs=40.2
Q ss_pred CCEEEEEcc-cHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhccc--CCEEEEcCC
Q 027408 36 GKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPK--CDIVVVNTP 101 (223)
Q Consensus 36 g~~igIiG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~~--aDvVv~~~p 101 (223)
+++|.|.|. |.||+.+++.|...|++|++.+|+..... ....++....+++++++. +|+|+.+..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~Dl~d~~~~~~~~~~~~~d~vih~A~ 69 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPK-FEQVNLLDSNAVHHIIHDFQPHVIVHCAA 69 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC-------------------CHHHHHHHCCSEEEECC-
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCCCC-eEEecCCCHHHHHHHHHhhCCCEEEECCc
Confidence 689999997 99999999999999999999997642211 111122223455666664 899987764
No 491
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=96.48 E-value=0.0073 Score=54.99 Aligned_cols=113 Identities=14% Similarity=0.117 Sum_probs=71.9
Q ss_pred CCCCEEEEEcccHHHHH-HHHHHccCCCeEEEEcCCCCCh--hHHHhhCCeec--CCHHhhcccCCEEEEc--CC-CChh
Q 027408 34 LEGKTVGTVGCGRIGKL-LLQRLKPFNCNLLYHDRVKMDP--QLEKETGAKFE--EDLDTMLPKCDIVVVN--TP-LTEK 105 (223)
Q Consensus 34 l~g~~igIiG~G~iG~~-iA~~l~~~G~~V~~~d~~~~~~--~~~~~~g~~~~--~~l~e~l~~aDvVv~~--~p-~~~~ 105 (223)
+.+++|-|||.|.+|.+ +|+.|+..|++|.++|...... +..++.|+... .+.+.+..++|+||.. +| .+|.
T Consensus 17 ~~~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~~~~~~~L~~~gi~~~~G~~~~~~~~~~d~vV~Spgi~~~~p~ 96 (524)
T 3hn7_A 17 FQGMHIHILGICGTFMGSLALLARALGHTVTGSDANIYPPMSTQLEQAGVTIEEGYLIAHLQPAPDLVVVGNAMKRGMDV 96 (524)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCCTTHHHHHHHTTCEEEESCCGGGGCSCCSEEEECTTCCTTSHH
T ss_pred ecCCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCCcHHHHHHHHCCCEEECCCCHHHcCCCCCEEEECCCcCCCCHH
Confidence 57899999999999997 7888999999999999864322 23445576543 2445555679999875 33 3343
Q ss_pred hhh-------cccH-HHHhc--CCCC-cEEEEcCCCCccCHHHHHHHHHhCC
Q 027408 106 TRG-------MFDK-DRIAK--MKKG-VLIVNNARGAIMDTQAVVDACSSGH 146 (223)
Q Consensus 106 t~~-------~i~~-~~~~~--mk~g-a~ivn~srg~~vd~~al~~~L~~g~ 146 (223)
... ++.+ +.+.. +++. .+-|--+.|+.-...-+...|+...
T Consensus 97 l~~a~~~gi~v~~~~e~l~~~~~~~~~vIaVTGTnGKTTTt~li~~iL~~~G 148 (524)
T 3hn7_A 97 IEYMLDTGLRYTSGPQFLSEQVLQSRHVIAVAGTHGKTTTTTMLAWILHYAG 148 (524)
T ss_dssp HHHHHHHTCCEEEHHHHHHHHTGGGSEEEEEECSSCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHCCCcEEEHHHHHHHHHhccCcEEEEECCCCHHHHHHHHHHHHHHcC
Confidence 221 2333 33333 3333 3446666788776666777777643
No 492
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=96.47 E-value=0.0092 Score=49.94 Aligned_cols=65 Identities=20% Similarity=0.275 Sum_probs=47.1
Q ss_pred CEEEEEcc-cHHHHHHHHHHccCCCeEEEEcCCCC-ChhHH---HhhCCee-------cCCHHhhcccCCEEEEcCC
Q 027408 37 KTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKM-DPQLE---KETGAKF-------EEDLDTMLPKCDIVVVNTP 101 (223)
Q Consensus 37 ~~igIiG~-G~iG~~iA~~l~~~G~~V~~~d~~~~-~~~~~---~~~g~~~-------~~~l~e~l~~aDvVv~~~p 101 (223)
++|.|.|. |.+|+.+++.|...|++|.+.+|+.. ..+.. ...+++. .+++.++++.+|+|+.+.+
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~ 88 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALA 88 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence 58999995 99999999999999999999998763 22211 1234332 1245567788999887776
No 493
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=96.46 E-value=0.0072 Score=49.60 Aligned_cols=38 Identities=24% Similarity=0.310 Sum_probs=34.4
Q ss_pred cCCCCCEEEEEccc---HHHHHHHHHHccCCCeEEEEcCCC
Q 027408 32 YDLEGKTVGTVGCG---RIGKLLLQRLKPFNCNLLYHDRVK 69 (223)
Q Consensus 32 ~~l~g~~igIiG~G---~iG~~iA~~l~~~G~~V~~~d~~~ 69 (223)
.+|+||++.|-|.+ .||+++|+.|...|++|++.+|+.
T Consensus 2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~ 42 (256)
T 4fs3_A 2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKE 42 (256)
T ss_dssp CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSG
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCH
Confidence 36899999999974 699999999999999999999875
No 494
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=96.45 E-value=0.0077 Score=49.72 Aligned_cols=38 Identities=16% Similarity=0.150 Sum_probs=34.5
Q ss_pred ccCCCCCEEEEEcc-cHHHHHHHHHHccCCCeEEEEcCC
Q 027408 31 AYDLEGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRV 68 (223)
Q Consensus 31 ~~~l~g~~igIiG~-G~iG~~iA~~l~~~G~~V~~~d~~ 68 (223)
...+.||++.|.|. |.||+.+|+.|...|++|++++++
T Consensus 5 m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 5 MGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEccc
Confidence 34689999999996 799999999999999999999986
No 495
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=96.45 E-value=0.0023 Score=51.54 Aligned_cols=65 Identities=20% Similarity=0.181 Sum_probs=43.5
Q ss_pred CEEEEEcc-cHHHHHHHHHHccCCCeEEEEcCCCCChhHHHhhCCeecCCHHhhcc----cCCEEEEcCC
Q 027408 37 KTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLP----KCDIVVVNTP 101 (223)
Q Consensus 37 ~~igIiG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~e~l~----~aDvVv~~~p 101 (223)
|+|.|.|. |.||+.+++.|...|++|++.+|+....+......+....+++++++ ..|+|+.+..
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag 71 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGGVLDGLVCCAG 71 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHHHHTTCCSEEEECCC
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccccccCCcccHHHHHHHHHHcCCCccEEEECCC
Confidence 57899996 99999999999999999999998753221100000111123444444 7899987764
No 496
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=96.45 E-value=0.0051 Score=52.89 Aligned_cols=30 Identities=23% Similarity=0.510 Sum_probs=24.5
Q ss_pred EEEEEcccHHHHHHHHHHccC-CCeEEEEcC
Q 027408 38 TVGTVGCGRIGKLLLQRLKPF-NCNLLYHDR 67 (223)
Q Consensus 38 ~igIiG~G~iG~~iA~~l~~~-G~~V~~~d~ 67 (223)
+|||+|+|.||+.+.+.+... .++|.+.+-
T Consensus 3 kVgI~G~G~iG~~l~R~l~~~~~veiv~i~~ 33 (330)
T 1gad_O 3 KVGINGFGRIGRIVFRAAQKRSDIEIVAIND 33 (330)
T ss_dssp EEEEECCSHHHHHHHHHHHTCSSEEEEEEEC
T ss_pred EEEEECcCHHHHHHHHHHHcCCCeEEEEEcC
Confidence 799999999999999998654 567766553
No 497
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=96.44 E-value=0.0055 Score=51.16 Aligned_cols=65 Identities=18% Similarity=0.202 Sum_probs=47.0
Q ss_pred CCEEEEEc-ccHHHHHHHHHHccCCCeEEEEcCCCCChhHHHh-----hCCeecCCHHhhcccCCEEEEcCCC
Q 027408 36 GKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE-----TGAKFEEDLDTMLPKCDIVVVNTPL 102 (223)
Q Consensus 36 g~~igIiG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~-----~g~~~~~~l~e~l~~aDvVv~~~p~ 102 (223)
+++|.|.| .|.||+.+++.|...|.+|++.+|++...+ ... .++. ..++.++++++|+|+.+...
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~ 72 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-INDYEYRVSDYT-LEDLINQLNDVDAVVHLAAT 72 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC------CCEEEECCCC-HHHHHHHTTTCSEEEECCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CCceEEEEcccc-HHHHHHhhcCCCEEEEcccc
Confidence 47899999 599999999999999999999999743222 111 1122 34566788899999887653
No 498
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=96.43 E-value=0.0022 Score=52.63 Aligned_cols=37 Identities=22% Similarity=0.336 Sum_probs=33.7
Q ss_pred CCCCCEEEEEcc---cHHHHHHHHHHccCCCeEEEEcCCC
Q 027408 33 DLEGKTVGTVGC---GRIGKLLLQRLKPFNCNLLYHDRVK 69 (223)
Q Consensus 33 ~l~g~~igIiG~---G~iG~~iA~~l~~~G~~V~~~d~~~ 69 (223)
.+.||++.|.|. |.||+.+|+.|...|++|++.+|+.
T Consensus 5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~ 44 (261)
T 2wyu_A 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAE 44 (261)
T ss_dssp CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCG
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCH
Confidence 578999999997 6999999999999999999999875
No 499
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=96.43 E-value=0.0047 Score=50.84 Aligned_cols=37 Identities=30% Similarity=0.397 Sum_probs=33.6
Q ss_pred CCCCCEEEEEcc-cHHHHHHHHHHccCCCeEEEEcCCC
Q 027408 33 DLEGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVK 69 (223)
Q Consensus 33 ~l~g~~igIiG~-G~iG~~iA~~l~~~G~~V~~~d~~~ 69 (223)
.+.||++.|.|. |.||+.+|+.|...|++|++.+|+.
T Consensus 3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~ 40 (263)
T 2a4k_A 3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREE 40 (263)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 478999999995 8999999999999999999999874
No 500
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=96.43 E-value=0.0062 Score=52.21 Aligned_cols=110 Identities=15% Similarity=0.176 Sum_probs=65.7
Q ss_pred CEEEEEcccHHHHHHHHHHcc-------CCCeEE-EEcCCCC------Ch----hHHHhhC-Ce--ecCCHHhhcc--cC
Q 027408 37 KTVGTVGCGRIGKLLLQRLKP-------FNCNLL-YHDRVKM------DP----QLEKETG-AK--FEEDLDTMLP--KC 93 (223)
Q Consensus 37 ~~igIiG~G~iG~~iA~~l~~-------~G~~V~-~~d~~~~------~~----~~~~~~g-~~--~~~~l~e~l~--~a 93 (223)
.+|+|+|+|.||+.+++.+.. .+.+|. ++|++.. .. +.....+ +. .+ +.++++. +.
T Consensus 5 irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g~~~~~~~-d~~e~l~~~~i 83 (325)
T 3ing_A 5 IRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTGRISDRAF-SGPEDLMGEAA 83 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSSCCHHHHHHHHHHHSCSCSSBC-CSGGGGTTSCC
T ss_pred EEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccccCHHHHHHHhhhcCCCCcccC-CHHHHhcCCCC
Confidence 479999999999999999865 345554 5565431 01 1112223 21 12 5677774 58
Q ss_pred CEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCCcc-CHHHHHHHHHhCCcc
Q 027408 94 DIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIM-DTQAVVDACSSGHIA 148 (223)
Q Consensus 94 DvVv~~~p~~~~t~~~i~~~~~~~mk~ga~ivn~srg~~v-d~~al~~~L~~g~i~ 148 (223)
|+|+.|+|..... ...-+-....++.|..+|....+.+. .-+.|.++.++.+..
T Consensus 84 DvVVe~T~~~~~~-~pa~~~~~~aL~aGkhVVtaNK~~la~~~~eL~~lA~~~g~~ 138 (325)
T 3ing_A 84 DLLVDCTPASRDG-VREYSLYRMAFESGMNVVTANKSGLANKWHDIMDSANQNSKY 138 (325)
T ss_dssp SEEEECCCCCSSS-HHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTCC
T ss_pred CEEEECCCCcccc-chHHHHHHHHHHCCCeEEEcCchhHHHHHHHHHHHHHHcCCe
Confidence 9999999943111 11113455667788888877665442 344566655555544
Done!