BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>027409
MKLVWSPDAASKAYIDTVKSCENIKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIG
LAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGELKGVDFLVVD
CTSKDFARVLRFARFSNKGAVLAFKNAFQRSTSGLRWQGQGVLDRGTRVVRSVFLPVGQG
LDIVHVGSTSGSGSGESMNKNHSRWIKHVDQKSGEEHFFRGKF

High Scoring Gene Products

Symbol, full name Information P value
AT2G45360 protein from Arabidopsis thaliana 2.0e-65
AT3G60780 protein from Arabidopsis thaliana 3.2e-58
AT1G62840 protein from Arabidopsis thaliana 3.5e-52
AT1G12320 protein from Arabidopsis thaliana 5.4e-47
AT5G62280 protein from Arabidopsis thaliana 3.0e-14

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  027409
        (223 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2050842 - symbol:AT2G45360 "AT2G45360" species...   666  2.0e-65   1
TAIR|locus:2101911 - symbol:AT3G60780 "AT3G60780" species...   598  3.2e-58   1
TAIR|locus:2026202 - symbol:AT1G62840 "AT1G62840" species...   541  3.5e-52   1
TAIR|locus:2034645 - symbol:AT1G12320 "AT1G12320" species...   492  5.4e-47   1
TAIR|locus:2167913 - symbol:AT5G62280 "AT5G62280" species...   183  3.0e-14   1


>TAIR|locus:2050842 [details] [associations]
            symbol:AT2G45360 "AT2G45360" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC002387
            UniGene:At.28771 UniGene:At.36643 EMBL:BT005233 EMBL:AK118397
            IPI:IPI00536683 PIR:F84889 RefSeq:NP_182061.1
            ProteinModelPortal:O22136 IntAct:O22136 EnsemblPlants:AT2G45360.1
            GeneID:819144 KEGG:ath:AT2G45360 TAIR:At2g45360 eggNOG:NOG250381
            HOGENOM:HOG000239049 InParanoid:O22136 OMA:ENTMEEF PhylomeDB:O22136
            ProtClustDB:CLSN2683346 Genevestigator:O22136 InterPro:IPR009902
            Pfam:PF07279 Uniprot:O22136
        Length = 215

 Score = 666 (239.5 bits), Expect = 2.0e-65, P = 2.0e-65
 Identities = 140/223 (62%), Positives = 159/223 (71%)

Query:     1 MKLVWSPDAASKAYIDTVKSCENIKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIG 60
             MKLVWSP+ AS AYIDTVKSC++ KESGVAE LSA AAGWNA+LIVE W+ G PITTS+G
Sbjct:     1 MKLVWSPETASDAYIDTVKSCKSDKESGVAEFLSATAAGWNARLIVETWSRGDPITTSVG 60

Query:    61 LAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIV--RQAEEVMGELKGVDFLV 118
             LA+AA HT  RHVCIVPDE+S+L YV AM   V   +EV+V     E  M E  GVDFLV
Sbjct:    61 LAVAATHTGGRHVCIVPDEQSKLEYVLAMRGFV--TTEVVVVGESVENTMEEFPGVDFLV 118

Query:   119 VDCTSKDFARVLRFARFSNKGAVLAFKNAFQRSTSGLRWQGQGVLDRGTRVVRSVFLPVG 178
             VD   ++F R LRFA+ SNKGAVL  KNA  R+ SG +W    VL RGTRVVRSVFLPVG
Sbjct:   119 VDSKRREFVRTLRFAKLSNKGAVLVCKNAMHRAISGFKWHD--VLKRGTRVVRSVFLPVG 176

Query:   179 QGLDIVHVXXXXXXXXXXXMNKN-HSRWIKHVDQKSGEEHFFR 220
              GLDIVHV            ++N  SRWI+HVD  SGEEH FR
Sbjct:   177 SGLDIVHVGATGRGD-----SRNLRSRWIRHVDHLSGEEHLFR 214


>TAIR|locus:2101911 [details] [associations]
            symbol:AT3G60780 "AT3G60780" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002686 EMBL:AL162295
            ProtClustDB:CLSN2683346 InterPro:IPR009902 Pfam:PF07279
            EMBL:AY086651 EMBL:DQ446780 IPI:IPI00548484 PIR:T47889
            RefSeq:NP_191637.1 UniGene:At.34383 ProteinModelPortal:Q9LZY5
            PRIDE:Q9LZY5 EnsemblPlants:AT3G60780.1 GeneID:825249
            KEGG:ath:AT3G60780 TAIR:At3g60780 InParanoid:Q9LZY5 OMA:CIVPDEE
            PhylomeDB:Q9LZY5 Genevestigator:Q9LZY5 Uniprot:Q9LZY5
        Length = 218

 Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
 Identities = 124/222 (55%), Positives = 151/222 (68%)

Query:     1 MKLVWSPDAASKAYIDTVKSCENIKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIG 60
             M+LVWSP+ AS AYI TV+SC++ ++S VAE LSA AAGWN +LIVE W+ G PI TS+G
Sbjct:     1 MRLVWSPETASNAYIHTVRSCKSYRDSSVAEFLSATAAGWNTRLIVETWSRGDPIATSVG 60

Query:    61 LAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVS-EVIVRQ-AEEVMGELKGVDFLV 118
             LA+AA HTC RHVCIVPDE SR  Y   M   V   S EV+V   AE+V+  + GVDF+V
Sbjct:    61 LAVAAIHTCGRHVCIVPDEESRSEYEAVMRGAVTSDSTEVMVLDSAEDVVERISGVDFMV 120

Query:   119 VDCTSKDFARVLRFARFSNKGAVLAFKNAFQRSTSGLRWQGQGVLDRGTRVVRSVFLPVG 178
             VD    +F   L  A+ S  GAVL  KNA  +S  G +WQG  +L RGTRVVRSVFLPVG
Sbjct:   121 VDSKRHEFVNALGLAKTSKMGAVLVCKNATLKSIPGFKWQG--LLRRGTRVVRSVFLPVG 178

Query:   179 QGLDIVHVXXXXXXXXXXXMNKNHSRWIKHVDQKSGEEHFFR 220
             +GL+IVHV           + K  SRWIKH+D +SGEEH F+
Sbjct:   179 RGLEIVHVGASGGGNG---LRKIPSRWIKHIDPRSGEEHLFK 217


>TAIR|locus:2026202 [details] [associations]
            symbol:AT1G62840 "AT1G62840" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 EMBL:AC007190 InterPro:IPR009902
            Pfam:PF07279 UniGene:At.36213 UniGene:At.36215
            ProtClustDB:CLSN2682254 EMBL:BT010897 EMBL:AK175387 EMBL:AK176638
            IPI:IPI00542008 PIR:A96653 RefSeq:NP_176472.1
            ProteinModelPortal:Q9SI67 DNASU:842584 EnsemblPlants:AT1G62840.1
            GeneID:842584 KEGG:ath:AT1G62840 TAIR:At1g62840 InParanoid:Q9SI67
            OMA:NGRHICI PhylomeDB:Q9SI67 Genevestigator:Q9SI67 Uniprot:Q9SI67
        Length = 224

 Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
 Identities = 117/227 (51%), Positives = 149/227 (65%)

Query:     1 MKLVWSPDAASKAYIDTVKSCENIKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIG 60
             MKL+WSP+ ASKAYIDTVKSCEN+   G AEL++AMAAGWNA LIVE W+ G  I  S+G
Sbjct:     1 MKLIWSPETASKAYIDTVKSCENLGTPGAAELVAAMAAGWNANLIVETWSEGETIAISVG 60

Query:    61 LAIAARHTCARHVCIVPDERSRLAYVKAMYDV-VGWVSEVIV--RQAEEV---MGELKGV 114
             L IA+RHT  RH+CIVP+ RS+ AY++AM +     + E I+   + EE+   M  L+G+
Sbjct:    61 LNIASRHTNGRHICIVPNARSQTAYLQAMAEQSCSNLPETIIMNEEGEELEHTMQTLQGI 120

Query:   115 DFLVVDCTSKDFA-RVLRFARFSNKGAVLAFKNAFQRSTSGLRWQGQGVLDRGTRVVRSV 173
             DFLVVD   KDFA  VLR A F ++GAV+  ++ ++RSTS   W  +   DR   VVR+V
Sbjct:   121 DFLVVDWDQKDFAANVLRNAVFGSRGAVVVCRSGYRRSTSCFSWT-KAFSDRN--VVRTV 177

Query:   174 FLPVGQGLDIVHVXXXXXXXXXXXMNKNHSRWIKHVDQKSGEEHFFR 220
              LPV  GL+I HV            N N  +WIKH DQ+SGEEH  R
Sbjct:   178 TLPVSGGLEIAHVAAARSSGKSDN-NSNKRKWIKHFDQRSGEEHVIR 223


>TAIR|locus:2034645 [details] [associations]
            symbol:AT1G12320 "AT1G12320" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002684
            GenomeReviews:CT485782_GR EMBL:AC025416 HOGENOM:HOG000239049
            InterPro:IPR009902 Pfam:PF07279 EMBL:AY063798 EMBL:AY117198
            IPI:IPI00545118 RefSeq:NP_172696.1 UniGene:At.27196
            ProteinModelPortal:Q9LNB3 DNASU:837786 EnsemblPlants:AT1G12320.1
            GeneID:837786 KEGG:ath:AT1G12320 TAIR:At1g12320 eggNOG:NOG321787
            InParanoid:Q9LNB3 OMA:ANAKHIC PhylomeDB:Q9LNB3
            ProtClustDB:CLSN2682254 ArrayExpress:Q9LNB3 Genevestigator:Q9LNB3
            Uniprot:Q9LNB3
        Length = 212

 Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
 Identities = 107/223 (47%), Positives = 144/223 (64%)

Query:     1 MKLVWSPDAASKAYIDTVKSCENIKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIG 60
             MKLVWSP+ ASKAYIDTVKSCEN++    AEL++AMAAGWN KLIVE W+ G  I +SIG
Sbjct:     1 MKLVWSPETASKAYIDTVKSCENLETPDAAELIAAMAAGWNVKLIVETWSEGDAIASSIG 60

Query:    61 LAIAARHTCARHVCIVPDERSRLAYVKAMYDV---VGWVSEVIVRQAEEVMGELKGVDFL 117
             L +A++H  A+H+CIV + RS  AY++A+ +    + +   ++  +  + M +L+GVDFL
Sbjct:    61 LNVASKHANAKHICIVQNSRSESAYLQAIQESSSPLNFPETIVAEEPGKAMKKLQGVDFL 120

Query:   118 VVDCTSKDFARV-LRFARFSNKGAVLAFKNAFQRSTSGLRWQGQGVLDRGTRVVRSVFLP 176
             VVD  +K+FA   L+ A F N+GAV+  +N +    S LR     VL R  +VVR+V LP
Sbjct:   121 VVDWRNKEFAAAALKNAAFGNRGAVVVCRNGY----SSLR----RVL-RDRKVVRTVTLP 171

Query:   177 VGQGLDIVHVXXXXXXXXXXXMNKNHSRWIKHVDQKSGEEHFF 219
             V  G++I HV              N  RWI HVDQ+SGEEH F
Sbjct:   172 VTGGIEIAHVAARNSGKS----GNNKRRWITHVDQRSGEEHVF 210


>TAIR|locus:2167913 [details] [associations]
            symbol:AT5G62280 "AT5G62280" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB019235
            InterPro:IPR009902 Pfam:PF07279 EMBL:BT010755 EMBL:BT011787
            EMBL:AK228759 IPI:IPI00539824 RefSeq:NP_201034.1 UniGene:At.24047
            ProteinModelPortal:Q9LVA8 STRING:Q9LVA8 EnsemblPlants:AT5G62280.1
            GeneID:836349 KEGG:ath:AT5G62280 TAIR:At5g62280 eggNOG:NOG325450
            HOGENOM:HOG000006158 InParanoid:Q9LVA8 OMA:LEPSEIH PhylomeDB:Q9LVA8
            ProtClustDB:CLSN2687328 Genevestigator:Q9LVA8 Uniprot:Q9LVA8
        Length = 236

 Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
 Identities = 65/232 (28%), Positives = 105/232 (45%)

Query:     5 WSPDAASKAYIDTVKSCENIKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIA 64
             WS + A+KAY+ T+K+ +  KE  VAE +SA+AAG +A+ I  A          + L  A
Sbjct:     4 WSAENATKAYLSTLKTDQRTKEPNVAEFISALAAGNSARKIAVACAGAANADILVALIAA 63

Query:    65 ARHTCARHVCIVPDERSRLAYVKAMY-DVVGWVSEVIVRQAEEVM--GELKGVDFLVVDC 121
             A  T  + VC++      +   K +    +  +  V+    ++ +        DF++VDC
Sbjct:    64 ANQTRGQVVCVLRGIEELIISQKMLEPSEIHQIQFVVGESNDDTLINNHFGEADFVLVDC 123

Query:   122 TSKDFARVLRFARFSNKGAVLAFKNAFQRSTSGLRWQ-GQGVLDRGT-RVV---RSVFLP 176
               ++   ++   +  N       +NA     SG+    G     RG+ R     ++ FLP
Sbjct:   124 NLENHQEIV--GKILNHHE----ENARTGGGSGVAVVVGYNAFSRGSWRFSDGRKTQFLP 177

Query:   177 VGQGLDIVHVXXXXXXXXXXXMNKNH--------SRWIKHVDQKSGEEHFFR 220
             +G+GL +  V           M KNH        SRW+  VD+ +GEEH FR
Sbjct:   178 IGEGLLVTRVNDNQKM-----MMKNHHRDQVMRKSRWVVKVDKCTGEEHVFR 224


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.135   0.415    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      223       212   0.00083  112 3  11 22  0.46    32
                                                     31  0.49    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  614 (65 KB)
  Total size of DFA:  187 KB (2106 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.22u 0.08s 17.30t   Elapsed:  00:00:03
  Total cpu time:  17.22u 0.08s 17.30t   Elapsed:  00:00:03
  Start:  Fri May 10 14:01:25 2013   End:  Fri May 10 14:01:28 2013

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