Query 027409
Match_columns 223
No_of_seqs 122 out of 873
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 15:48:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027409.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027409hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dr5_A Putative O-methyltransf 100.0 7.7E-34 2.6E-38 241.9 18.0 176 8-188 5-214 (221)
2 3r3h_A O-methyltransferase, SA 100.0 1.7E-32 5.8E-37 236.2 14.2 163 24-193 43-226 (242)
3 3c3y_A Pfomt, O-methyltransfer 100.0 2.2E-31 7.6E-36 227.7 16.7 159 24-187 53-236 (237)
4 1sui_A Caffeoyl-COA O-methyltr 100.0 1E-30 3.6E-35 225.6 16.5 159 24-187 62-246 (247)
5 3cbg_A O-methyltransferase; cy 100.0 1.5E-29 5.2E-34 215.1 17.1 157 24-187 55-232 (232)
6 3ntv_A MW1564 protein; rossman 100.0 1.3E-28 4.3E-33 209.0 17.9 158 24-187 54-231 (232)
7 2avd_A Catechol-O-methyltransf 100.0 3.2E-28 1.1E-32 203.4 16.9 157 24-187 52-229 (229)
8 3u81_A Catechol O-methyltransf 100.0 1.6E-27 5.4E-32 199.9 20.1 156 24-188 41-214 (221)
9 3tfw_A Putative O-methyltransf 100.0 1.2E-27 4.2E-32 205.4 19.2 177 10-193 14-231 (248)
10 3duw_A OMT, O-methyltransferas 100.0 1.1E-27 3.9E-32 199.6 17.7 157 24-187 41-222 (223)
11 3tr6_A O-methyltransferase; ce 100.0 1.3E-27 4.3E-32 199.2 16.1 157 24-187 47-224 (225)
12 3c3p_A Methyltransferase; NP_9 99.9 2.5E-26 8.6E-31 190.6 20.8 157 24-187 39-209 (210)
13 3cvo_A Methyltransferase-like 99.9 4.1E-27 1.4E-31 200.9 11.4 116 24-151 15-159 (202)
14 2hnk_A SAM-dependent O-methylt 99.9 1.2E-25 4.1E-30 190.5 17.0 158 24-188 43-232 (239)
15 2gpy_A O-methyltransferase; st 99.9 3E-24 1E-28 180.7 17.1 159 24-188 37-215 (233)
16 2wk1_A NOVP; transferase, O-me 99.9 9.4E-23 3.2E-27 181.6 10.9 155 24-186 85-280 (282)
17 2bm8_A Cephalosporin hydroxyla 99.7 1.2E-16 4E-21 136.7 10.0 117 24-147 63-188 (236)
18 3fpf_A Mtnas, putative unchara 99.6 1E-14 3.5E-19 130.9 15.8 106 35-147 116-223 (298)
19 3e05_A Precorrin-6Y C5,15-meth 99.6 1.6E-14 5.5E-19 118.6 14.0 120 24-148 23-144 (204)
20 3njr_A Precorrin-6Y methylase; 99.6 6E-14 2.1E-18 116.9 14.4 116 24-148 38-156 (204)
21 3orh_A Guanidinoacetate N-meth 99.6 1.7E-14 5.8E-19 122.8 11.1 112 32-149 49-173 (236)
22 2b2c_A Spermidine synthase; be 99.5 1E-14 3.4E-19 130.8 8.4 143 39-187 106-269 (314)
23 3lbf_A Protein-L-isoaspartate 99.5 2.9E-14 1E-18 117.1 10.5 113 24-145 60-173 (210)
24 3p9n_A Possible methyltransfer 99.5 3.2E-13 1.1E-17 109.7 15.2 111 31-147 32-154 (189)
25 1xdz_A Methyltransferase GIDB; 99.5 1.6E-13 5.5E-18 116.0 13.6 100 40-145 69-173 (240)
26 2o07_A Spermidine synthase; st 99.5 4.1E-14 1.4E-18 126.0 9.7 142 39-187 93-256 (304)
27 2esr_A Methyltransferase; stru 99.5 1E-13 3.5E-18 110.9 10.2 103 39-147 29-139 (177)
28 1l3i_A Precorrin-6Y methyltran 99.5 6.8E-13 2.3E-17 105.5 13.8 117 24-147 16-135 (192)
29 2fpo_A Methylase YHHF; structu 99.5 5E-13 1.7E-17 110.8 12.7 109 32-146 45-160 (202)
30 3hm2_A Precorrin-6Y C5,15-meth 99.5 4.6E-13 1.6E-17 106.2 12.0 115 28-149 12-130 (178)
31 1xj5_A Spermidine synthase 1; 99.5 4.6E-13 1.6E-17 121.0 13.2 108 40-151 119-241 (334)
32 2qy6_A UPF0209 protein YFCK; s 99.5 1.5E-13 5.3E-18 120.2 9.7 104 39-144 58-211 (257)
33 2yxd_A Probable cobalt-precorr 99.5 1.8E-12 6.3E-17 102.5 14.5 114 24-147 18-132 (183)
34 2ift_A Putative methylase HI07 99.4 9.3E-13 3.2E-17 109.1 13.0 110 31-146 43-163 (201)
35 3mb5_A SAM-dependent methyltra 99.4 1.1E-12 3.8E-17 110.8 13.0 128 12-146 64-194 (255)
36 3evz_A Methyltransferase; NYSG 99.4 7.2E-13 2.5E-17 110.1 10.5 112 26-144 40-177 (230)
37 2yxe_A Protein-L-isoaspartate 99.4 9.9E-13 3.4E-17 108.2 11.0 116 24-145 60-176 (215)
38 1uir_A Polyamine aminopropyltr 99.4 9.3E-13 3.2E-17 117.3 11.2 102 39-145 75-194 (314)
39 3mti_A RRNA methylase; SAM-dep 99.4 1.2E-12 4.2E-17 105.3 10.8 108 31-145 10-134 (185)
40 1jg1_A PIMT;, protein-L-isoasp 99.4 1E-12 3.5E-17 110.5 10.7 114 24-145 74-188 (235)
41 3gjy_A Spermidine synthase; AP 99.4 1.1E-12 3.8E-17 118.4 11.2 103 40-147 86-201 (317)
42 2fhp_A Methylase, putative; al 99.4 2.9E-12 1E-16 102.4 11.8 101 40-146 43-154 (187)
43 2pbf_A Protein-L-isoaspartate 99.4 1.9E-12 6.5E-17 107.6 10.5 116 24-145 61-192 (227)
44 1iy9_A Spermidine synthase; ro 99.4 2E-12 6.9E-17 113.1 11.1 103 40-146 74-189 (275)
45 3g89_A Ribosomal RNA small sub 99.4 1.1E-11 3.8E-16 106.8 15.2 98 41-144 80-182 (249)
46 1mjf_A Spermidine synthase; sp 99.4 1.9E-12 6.6E-17 113.3 10.2 141 38-187 72-239 (281)
47 2b25_A Hypothetical protein; s 99.4 4.3E-12 1.5E-16 112.6 12.5 129 10-144 74-217 (336)
48 3eey_A Putative rRNA methylase 99.4 3.5E-12 1.2E-16 103.6 10.1 103 40-146 21-139 (197)
49 4dzr_A Protein-(glutamine-N5) 99.3 1.9E-12 6.4E-17 105.0 8.3 118 24-146 9-165 (215)
50 1o54_A SAM-dependent O-methylt 99.3 8.8E-12 3E-16 107.4 12.8 129 11-146 82-213 (277)
51 1jsx_A Glucose-inhibited divis 99.3 9.6E-12 3.3E-16 101.5 12.0 98 41-145 65-164 (207)
52 1inl_A Spermidine synthase; be 99.3 5.7E-12 2E-16 111.3 11.3 103 39-146 88-205 (296)
53 2i7c_A Spermidine synthase; tr 99.3 5.2E-12 1.8E-16 110.8 11.0 102 40-146 77-192 (283)
54 1zx0_A Guanidinoacetate N-meth 99.3 5.7E-12 2E-16 105.8 10.8 112 30-147 47-171 (236)
55 1ws6_A Methyltransferase; stru 99.3 8.4E-12 2.9E-16 98.1 11.0 99 41-146 41-147 (171)
56 4gek_A TRNA (CMO5U34)-methyltr 99.3 8.1E-12 2.8E-16 108.6 11.8 104 41-149 70-182 (261)
57 3grz_A L11 mtase, ribosomal pr 99.3 6.4E-12 2.2E-16 102.8 10.4 114 26-147 44-160 (205)
58 3dxy_A TRNA (guanine-N(7)-)-me 99.3 5.8E-12 2E-16 106.4 10.4 99 41-144 34-148 (218)
59 3jwh_A HEN1; methyltransferase 99.3 1.4E-11 4.9E-16 101.5 12.5 116 24-145 12-140 (217)
60 2pt6_A Spermidine synthase; tr 99.3 5.5E-12 1.9E-16 112.9 10.7 103 39-146 114-230 (321)
61 1vbf_A 231AA long hypothetical 99.3 6.1E-12 2.1E-16 104.5 10.2 113 24-146 53-165 (231)
62 2cmg_A Spermidine synthase; tr 99.3 7.9E-13 2.7E-17 115.4 5.0 95 40-145 71-170 (262)
63 1dl5_A Protein-L-isoaspartate 99.3 6.3E-12 2.2E-16 111.2 10.8 116 24-145 58-174 (317)
64 3adn_A Spermidine synthase; am 99.3 2.8E-12 9.6E-17 113.8 8.5 103 40-146 82-198 (294)
65 3a27_A TYW2, uncharacterized p 99.3 6.9E-12 2.4E-16 109.1 10.6 114 26-146 104-219 (272)
66 3ocj_A Putative exported prote 99.3 2.4E-12 8.3E-17 112.4 7.6 106 39-149 116-230 (305)
67 2yvl_A TRMI protein, hypotheti 99.3 1.8E-11 6.3E-16 102.3 12.5 114 24-146 74-190 (248)
68 2pwy_A TRNA (adenine-N(1)-)-me 99.3 2.8E-11 9.7E-16 101.7 13.6 129 12-146 67-198 (258)
69 1yzh_A TRNA (guanine-N(7)-)-me 99.3 2.3E-11 7.9E-16 100.7 12.6 100 40-144 40-154 (214)
70 1nkv_A Hypothetical protein YJ 99.3 2.2E-11 7.5E-16 102.3 12.6 116 24-146 19-140 (256)
71 3jwg_A HEN1, methyltransferase 99.3 2.6E-11 9.1E-16 99.9 12.4 116 24-145 12-140 (219)
72 1dus_A MJ0882; hypothetical pr 99.3 1.2E-11 4.1E-16 98.4 9.5 109 29-146 41-157 (194)
73 1ixk_A Methyltransferase; open 99.3 1.3E-11 4.5E-16 109.7 10.6 119 25-147 102-247 (315)
74 1i1n_A Protein-L-isoaspartate 99.3 2.1E-11 7.3E-16 101.1 11.1 116 24-145 58-181 (226)
75 3lpm_A Putative methyltransfer 99.3 1.4E-11 4.7E-16 105.4 10.2 109 30-144 37-174 (259)
76 2fca_A TRNA (guanine-N(7)-)-me 99.3 2.8E-11 9.6E-16 101.1 11.6 100 40-144 37-151 (213)
77 2qfm_A Spermine synthase; sper 99.3 8.7E-12 3E-16 114.6 9.1 100 41-146 188-314 (364)
78 1i9g_A Hypothetical protein RV 99.3 3.2E-11 1.1E-15 103.1 12.1 129 13-146 71-203 (280)
79 1r18_A Protein-L-isoaspartate( 99.3 1.2E-11 4E-16 103.3 8.9 116 26-146 67-194 (227)
80 3dlc_A Putative S-adenosyl-L-m 99.3 4.6E-11 1.6E-15 97.0 12.1 112 31-149 31-151 (219)
81 3f4k_A Putative methyltransfer 99.3 2.5E-11 8.7E-16 101.9 10.8 112 29-147 34-151 (257)
82 3ajd_A Putative methyltransfer 99.3 1.8E-11 6.3E-16 106.2 10.0 117 26-146 68-211 (274)
83 2ex4_A Adrenal gland protein A 99.3 1.4E-11 4.9E-16 103.3 8.9 116 27-148 61-188 (241)
84 3kkz_A Uncharacterized protein 99.3 3.3E-11 1.1E-15 102.5 11.0 113 29-148 34-152 (267)
85 2xvm_A Tellurite resistance pr 99.2 6.6E-11 2.2E-15 95.1 11.8 101 36-144 27-134 (199)
86 1wzn_A SAM-dependent methyltra 99.2 8.3E-11 2.9E-15 98.7 12.9 110 29-146 26-145 (252)
87 3tos_A CALS11; methyltransfera 99.2 2E-11 6.7E-16 107.4 9.4 144 35-186 61-255 (257)
88 4dmg_A Putative uncharacterize 99.2 4.4E-11 1.5E-15 110.3 12.0 106 36-148 208-329 (393)
89 3dmg_A Probable ribosomal RNA 99.2 3.1E-11 1.1E-15 110.7 10.9 113 25-144 212-338 (381)
90 1y8c_A S-adenosylmethionine-de 99.2 4.9E-11 1.7E-15 98.7 10.7 111 27-145 21-141 (246)
91 2b3t_A Protein methyltransfera 99.2 1E-10 3.6E-15 100.8 12.9 117 24-146 90-238 (276)
92 3gdh_A Trimethylguanosine synt 99.2 1.3E-11 4.3E-16 103.4 6.9 110 29-146 66-181 (241)
93 2igt_A SAM dependent methyltra 99.2 1.2E-10 4E-15 104.8 13.6 104 41-151 153-277 (332)
94 4htf_A S-adenosylmethionine-de 99.2 1.1E-10 3.6E-15 100.3 12.6 99 41-146 68-173 (285)
95 2ozv_A Hypothetical protein AT 99.2 1.8E-11 6E-16 105.6 7.6 110 30-144 25-168 (260)
96 3hem_A Cyclopropane-fatty-acyl 99.2 2.1E-10 7.2E-15 99.6 14.4 116 25-149 53-186 (302)
97 3bwc_A Spermidine synthase; SA 99.2 8.2E-11 2.8E-15 104.1 12.0 103 40-146 94-210 (304)
98 1yb2_A Hypothetical protein TA 99.2 2.9E-11 9.8E-16 104.4 8.8 127 13-145 82-210 (275)
99 1nv8_A HEMK protein; class I a 99.2 2E-10 6.7E-15 100.9 14.3 114 24-145 103-248 (284)
100 3m70_A Tellurite resistance pr 99.2 1.2E-10 3.9E-15 100.1 12.4 105 31-144 111-221 (286)
101 2kw5_A SLR1183 protein; struct 99.2 1.1E-10 3.8E-15 94.8 11.4 110 31-147 19-132 (202)
102 3dtn_A Putative methyltransfer 99.2 2.9E-11 9.8E-16 100.4 8.0 102 39-147 42-149 (234)
103 3m4x_A NOL1/NOP2/SUN family pr 99.2 2.9E-11 9.8E-16 113.9 8.8 119 24-146 88-234 (456)
104 2nxc_A L11 mtase, ribosomal pr 99.2 1.8E-10 6.1E-15 98.9 12.6 115 27-149 105-221 (254)
105 3m6w_A RRNA methylase; rRNA me 99.2 3.3E-11 1.1E-15 113.7 8.5 119 24-146 84-229 (464)
106 3kr9_A SAM-dependent methyltra 99.2 1.1E-10 3.7E-15 100.6 11.1 110 33-147 6-120 (225)
107 3d2l_A SAM-dependent methyltra 99.2 8.6E-11 2.9E-15 97.5 10.1 106 31-145 22-136 (243)
108 1fbn_A MJ fibrillarin homologu 99.2 3.9E-11 1.3E-15 100.7 7.9 99 41-145 74-177 (230)
109 2frn_A Hypothetical protein PH 99.2 6.3E-11 2.1E-15 103.2 9.5 99 40-146 124-225 (278)
110 3c0k_A UPF0064 protein YCCW; P 99.2 1.2E-10 4.2E-15 106.1 11.6 107 34-146 213-339 (396)
111 3gu3_A Methyltransferase; alph 99.2 9.2E-11 3.2E-15 101.4 10.1 106 36-146 17-126 (284)
112 1wxx_A TT1595, hypothetical pr 99.2 6.3E-11 2.2E-15 107.7 9.3 104 35-146 204-325 (382)
113 2fk8_A Methoxy mycolic acid sy 99.2 3.3E-10 1.1E-14 98.9 13.5 115 25-148 71-196 (318)
114 3tma_A Methyltransferase; thum 99.2 1.3E-10 4.3E-15 104.1 10.6 117 24-144 186-315 (354)
115 2jjq_A Uncharacterized RNA met 99.2 3.3E-10 1.1E-14 105.4 13.7 113 24-145 272-386 (425)
116 1kpg_A CFA synthase;, cyclopro 99.2 5E-10 1.7E-14 96.0 13.8 115 25-148 45-170 (287)
117 3dh0_A SAM dependent methyltra 99.2 1.6E-10 5.5E-15 94.8 10.3 113 30-147 27-144 (219)
118 3ofk_A Nodulation protein S; N 99.2 5.3E-11 1.8E-15 97.7 7.3 108 30-146 40-154 (216)
119 3v97_A Ribosomal RNA large sub 99.2 1.8E-10 6.1E-15 113.3 12.2 113 30-148 528-659 (703)
120 2as0_A Hypothetical protein PH 99.2 1.5E-10 5E-15 105.5 10.8 106 35-146 210-336 (396)
121 2frx_A Hypothetical protein YE 99.2 1.6E-10 5.6E-15 109.0 11.4 119 25-147 99-247 (479)
122 1xxl_A YCGJ protein; structura 99.1 2.1E-10 7.3E-15 96.3 10.5 111 27-145 7-123 (239)
123 3mgg_A Methyltransferase; NYSG 99.1 1.6E-10 5.6E-15 98.3 9.9 103 39-146 35-142 (276)
124 3ckk_A TRNA (guanine-N(7)-)-me 99.1 1.8E-10 6.2E-15 98.4 9.8 101 39-144 44-166 (235)
125 3sso_A Methyltransferase; macr 99.1 3E-10 1E-14 106.1 11.5 95 41-148 216-326 (419)
126 2yqz_A Hypothetical protein TT 99.1 9.3E-11 3.2E-15 98.4 7.3 129 1-145 1-140 (263)
127 2b78_A Hypothetical protein SM 99.1 2.3E-10 8E-15 104.5 10.5 101 40-146 211-331 (385)
128 2p8j_A S-adenosylmethionine-de 99.1 2.8E-10 9.6E-15 92.5 9.9 114 27-147 9-129 (209)
129 2yxl_A PH0851 protein, 450AA l 99.1 3E-10 1E-14 105.7 11.3 118 25-146 243-389 (450)
130 3thr_A Glycine N-methyltransfe 99.1 1.3E-09 4.5E-14 93.5 14.4 115 24-145 40-174 (293)
131 3ou2_A SAM-dependent methyltra 99.1 3.5E-10 1.2E-14 92.1 10.1 107 29-147 34-147 (218)
132 2dul_A N(2),N(2)-dimethylguano 99.1 4.8E-10 1.6E-14 102.9 11.9 103 39-146 45-164 (378)
133 1vl5_A Unknown conserved prote 99.1 3E-10 1E-14 96.1 9.7 101 36-144 32-138 (260)
134 3sm3_A SAM-dependent methyltra 99.1 2.6E-10 9E-15 93.6 8.9 101 39-146 28-141 (235)
135 2o57_A Putative sarcosine dime 99.1 6.6E-10 2.2E-14 95.7 11.6 104 38-148 79-189 (297)
136 3lcc_A Putative methyl chlorid 99.1 2.3E-10 7.7E-15 95.4 8.4 99 40-146 65-171 (235)
137 1wy7_A Hypothetical protein PH 99.1 2.9E-09 9.9E-14 86.8 14.7 111 24-145 29-148 (207)
138 3lec_A NADB-rossmann superfami 99.1 6.4E-10 2.2E-14 96.2 11.1 110 32-146 11-126 (230)
139 2vdv_E TRNA (guanine-N(7)-)-me 99.1 4.3E-10 1.5E-14 95.4 9.8 101 40-144 48-171 (246)
140 1ve3_A Hypothetical protein PH 99.1 8E-10 2.7E-14 90.7 11.0 109 30-146 26-142 (227)
141 1g8a_A Fibrillarin-like PRE-rR 99.1 5.3E-10 1.8E-14 92.9 9.9 100 41-145 73-177 (227)
142 3h2b_A SAM-dependent methyltra 99.1 7.4E-10 2.5E-14 89.9 10.5 109 27-147 28-142 (203)
143 3r0q_C Probable protein argini 99.1 3.4E-10 1.2E-14 102.9 9.3 111 29-147 48-170 (376)
144 1uwv_A 23S rRNA (uracil-5-)-me 99.1 1.1E-09 3.6E-14 101.5 12.7 109 29-144 271-387 (433)
145 3vc1_A Geranyl diphosphate 2-C 99.1 3.5E-10 1.2E-14 99.0 8.9 101 39-146 115-221 (312)
146 3q7e_A Protein arginine N-meth 99.1 4.2E-10 1.5E-14 101.2 9.4 103 37-146 62-173 (349)
147 4dcm_A Ribosomal RNA large sub 99.1 5.3E-10 1.8E-14 102.1 10.1 113 25-144 207-332 (375)
148 2gb4_A Thiopurine S-methyltran 99.1 8.8E-10 3E-14 95.3 10.8 113 24-143 51-188 (252)
149 3bus_A REBM, methyltransferase 99.1 1.2E-09 4.2E-14 92.5 11.5 116 26-148 43-168 (273)
150 1u2z_A Histone-lysine N-methyl 99.1 9.6E-10 3.3E-14 102.9 11.8 119 27-150 228-363 (433)
151 2qm3_A Predicted methyltransfe 99.0 1.6E-09 5.4E-14 98.1 12.8 99 41-145 172-277 (373)
152 3axs_A Probable N(2),N(2)-dime 99.0 6.5E-10 2.2E-14 102.8 10.3 100 41-146 52-158 (392)
153 3g2m_A PCZA361.24; SAM-depende 99.0 4E-10 1.4E-14 97.7 8.5 99 41-147 82-191 (299)
154 1g6q_1 HnRNP arginine N-methyl 99.0 1.1E-09 3.6E-14 97.7 11.0 107 31-144 28-143 (328)
155 3m33_A Uncharacterized protein 99.0 1.7E-10 5.8E-15 96.4 5.5 106 24-143 29-139 (226)
156 3pfg_A N-methyltransferase; N, 99.0 8.4E-10 2.9E-14 93.4 9.8 110 26-147 34-152 (263)
157 2fyt_A Protein arginine N-meth 99.0 6.7E-10 2.3E-14 99.7 9.7 102 37-145 60-170 (340)
158 3gnl_A Uncharacterized protein 99.0 1.2E-09 4.2E-14 95.3 11.0 109 33-146 12-126 (244)
159 3tm4_A TRNA (guanine N2-)-meth 99.0 1.3E-09 4.5E-14 98.9 11.5 117 24-146 201-331 (373)
160 3hnr_A Probable methyltransfer 99.0 8.9E-10 3E-14 90.4 9.5 108 28-147 33-146 (220)
161 1sqg_A SUN protein, FMU protei 99.0 8.1E-10 2.8E-14 101.9 9.8 118 24-146 229-374 (429)
162 1ri5_A MRNA capping enzyme; me 99.0 2.2E-09 7.4E-14 91.6 11.6 101 40-146 63-174 (298)
163 1nt2_A Fibrillarin-like PRE-rR 99.0 1.7E-09 5.8E-14 90.6 10.6 99 41-145 57-160 (210)
164 1ne2_A Hypothetical protein TA 99.0 3.8E-09 1.3E-13 86.0 12.5 109 24-147 31-148 (200)
165 2p7i_A Hypothetical protein; p 99.0 8.8E-10 3E-14 90.9 8.5 108 28-146 29-141 (250)
166 3bt7_A TRNA (uracil-5-)-methyl 99.0 4E-09 1.4E-13 95.5 13.3 113 24-145 193-326 (369)
167 2yx1_A Hypothetical protein MJ 99.0 1.5E-09 5.2E-14 97.2 10.3 104 30-145 184-290 (336)
168 3dli_A Methyltransferase; PSI- 99.0 1E-09 3.5E-14 91.9 8.5 95 38-146 38-140 (240)
169 3g5t_A Trans-aconitate 3-methy 99.0 3.5E-09 1.2E-13 91.7 12.1 115 26-144 22-147 (299)
170 3e8s_A Putative SAM dependent 99.0 4.7E-09 1.6E-13 85.4 12.2 102 34-147 45-153 (227)
171 3cgg_A SAM-dependent methyltra 99.0 2.9E-09 9.8E-14 84.6 10.6 104 30-146 37-147 (195)
172 2y1w_A Histone-arginine methyl 99.0 2.3E-09 8E-14 96.2 11.2 98 38-144 47-153 (348)
173 3g07_A 7SK snRNA methylphospha 99.0 7.3E-10 2.5E-14 96.7 7.7 103 40-147 45-221 (292)
174 1o9g_A RRNA methyltransferase; 99.0 1E-09 3.5E-14 92.9 8.2 112 31-144 38-212 (250)
175 1pjz_A Thiopurine S-methyltran 99.0 8.4E-10 2.9E-14 91.3 7.3 110 25-141 7-135 (203)
176 3bkw_A MLL3908 protein, S-aden 99.0 1.4E-09 4.7E-14 90.1 8.4 107 32-146 34-144 (243)
177 2b9e_A NOL1/NOP2/SUN domain fa 99.0 1.1E-09 3.7E-14 97.9 8.2 95 24-122 85-183 (309)
178 2ipx_A RRNA 2'-O-methyltransfe 99.0 2E-09 7E-14 90.0 9.3 115 26-145 56-181 (233)
179 4df3_A Fibrillarin-like rRNA/T 99.0 1.5E-09 5.3E-14 93.9 8.8 99 41-144 77-180 (233)
180 2h00_A Methyltransferase 10 do 99.0 2.9E-09 9.8E-14 90.0 10.1 89 27-120 46-147 (254)
181 3bkx_A SAM-dependent methyltra 98.9 7.3E-09 2.5E-13 87.8 11.9 105 39-147 41-160 (275)
182 3dp7_A SAM-dependent methyltra 98.9 3.3E-09 1.1E-13 95.3 10.2 102 40-149 178-291 (363)
183 3ujc_A Phosphoethanolamine N-m 98.9 2.7E-09 9.2E-14 89.3 8.9 117 24-148 35-161 (266)
184 3mq2_A 16S rRNA methyltransfer 98.9 1.4E-09 5E-14 89.5 6.9 101 39-145 25-139 (218)
185 1zq9_A Probable dimethyladenos 98.9 6.1E-09 2.1E-13 91.3 11.2 90 24-122 11-102 (285)
186 3k6r_A Putative transferase PH 98.9 3.8E-09 1.3E-13 93.5 9.6 98 40-145 124-224 (278)
187 3htx_A HEN1; HEN1, small RNA m 98.9 8.5E-09 2.9E-13 103.7 13.2 114 29-145 709-834 (950)
188 3p2e_A 16S rRNA methylase; met 98.9 9.4E-10 3.2E-14 93.2 5.4 112 25-144 10-137 (225)
189 1qzz_A RDMB, aclacinomycin-10- 98.9 3.5E-09 1.2E-13 94.3 9.3 102 40-149 181-293 (374)
190 3gwz_A MMCR; methyltransferase 98.9 8.9E-09 3E-13 92.7 11.9 102 40-149 201-311 (369)
191 1xtp_A LMAJ004091AAA; SGPP, st 98.9 8.9E-09 3E-13 86.0 11.0 99 40-146 92-197 (254)
192 2r3s_A Uncharacterized protein 98.9 8.2E-09 2.8E-13 90.3 11.3 102 40-149 164-275 (335)
193 3bzb_A Uncharacterized protein 98.9 9.2E-09 3.1E-13 89.4 11.5 111 27-143 62-202 (281)
194 3e23_A Uncharacterized protein 98.9 3.3E-09 1.1E-13 86.7 8.1 102 32-146 33-141 (211)
195 3i53_A O-methyltransferase; CO 98.9 5.5E-09 1.9E-13 92.1 9.8 101 41-149 169-278 (332)
196 3g5l_A Putative S-adenosylmeth 98.9 2.2E-09 7.6E-14 90.2 6.9 96 41-145 44-144 (253)
197 2pjd_A Ribosomal RNA small sub 98.9 1.5E-09 5.1E-14 97.0 6.0 109 28-144 184-301 (343)
198 3b3j_A Histone-arginine methyl 98.9 7.2E-09 2.5E-13 97.7 10.9 107 29-144 143-261 (480)
199 1tw3_A COMT, carminomycin 4-O- 98.9 7.1E-09 2.4E-13 92.0 10.0 100 40-147 182-290 (360)
200 3id6_C Fibrillarin-like rRNA/T 98.9 1.2E-08 4E-13 88.0 10.7 102 39-145 74-180 (232)
201 3ccf_A Cyclopropane-fatty-acyl 98.9 6.5E-09 2.2E-13 89.0 9.0 99 36-146 52-154 (279)
202 1x19_A CRTF-related protein; m 98.9 2.1E-08 7.2E-13 89.4 12.5 102 39-148 188-298 (359)
203 2p35_A Trans-aconitate 2-methy 98.9 4.7E-09 1.6E-13 87.9 7.8 97 39-145 31-131 (259)
204 3bxo_A N,N-dimethyltransferase 98.9 1.5E-08 5E-13 83.7 10.6 109 28-148 26-143 (239)
205 3l8d_A Methyltransferase; stru 98.9 1E-08 3.5E-13 85.0 9.6 105 32-146 43-153 (242)
206 2i62_A Nicotinamide N-methyltr 98.9 2.2E-09 7.5E-14 90.0 5.5 103 40-148 55-200 (265)
207 2pxx_A Uncharacterized protein 98.8 5.2E-09 1.8E-13 84.7 7.3 107 32-146 32-159 (215)
208 3iv6_A Putative Zn-dependent a 98.8 6.2E-09 2.1E-13 91.2 8.2 109 28-145 32-147 (261)
209 3ege_A Putative methyltransfer 98.8 6.1E-09 2.1E-13 88.6 8.0 109 24-146 17-131 (261)
210 3o4f_A Spermidine synthase; am 98.8 1.2E-08 4.1E-13 91.3 10.1 105 38-146 80-198 (294)
211 2r6z_A UPF0341 protein in RSP 98.8 2.3E-09 7.7E-14 93.4 5.2 85 30-121 72-169 (258)
212 2oyr_A UPF0341 protein YHIQ; a 98.8 5.1E-09 1.7E-13 91.7 7.4 84 31-121 76-172 (258)
213 3q87_B N6 adenine specific DNA 98.8 1.2E-08 4.2E-13 82.0 9.0 79 25-121 6-86 (170)
214 3bgv_A MRNA CAP guanine-N7 met 98.8 2.3E-08 8E-13 87.2 11.3 100 41-146 34-155 (313)
215 2ip2_A Probable phenazine-spec 98.8 1.6E-08 5.4E-13 88.9 10.0 99 43-149 169-276 (334)
216 3mcz_A O-methyltransferase; ad 98.8 1.7E-08 5.9E-13 89.3 10.3 102 42-149 180-291 (352)
217 2h1r_A Dimethyladenosine trans 98.8 8E-09 2.7E-13 91.2 8.0 90 24-122 25-115 (299)
218 4fsd_A Arsenic methyltransfera 98.8 1.9E-08 6.4E-13 91.1 10.4 106 39-147 81-204 (383)
219 3fzg_A 16S rRNA methylase; met 98.8 4.1E-08 1.4E-12 83.5 11.4 114 27-146 34-152 (200)
220 3ggd_A SAM-dependent methyltra 98.8 1.1E-08 3.8E-13 85.4 7.7 109 30-147 44-165 (245)
221 2avn_A Ubiquinone/menaquinone 98.8 1.3E-08 4.5E-13 86.4 7.6 92 41-145 54-151 (260)
222 1p91_A Ribosomal RNA large sub 98.7 2.3E-08 7.9E-13 84.8 8.3 108 24-145 66-177 (269)
223 2g72_A Phenylethanolamine N-me 98.7 2.7E-08 9.1E-13 85.7 8.7 103 41-148 71-217 (289)
224 3uwp_A Histone-lysine N-methyl 98.7 7.5E-08 2.6E-12 90.3 12.4 108 37-149 169-291 (438)
225 4hg2_A Methyltransferase type 98.7 1.6E-08 5.4E-13 87.8 7.1 100 31-144 28-133 (257)
226 3ll7_A Putative methyltransfer 98.7 1.2E-08 4.3E-13 94.9 6.3 74 42-121 94-171 (410)
227 3gru_A Dimethyladenosine trans 98.7 6.4E-08 2.2E-12 86.1 10.2 89 24-121 33-122 (295)
228 2gs9_A Hypothetical protein TT 98.7 1.3E-08 4.3E-13 83.1 5.0 92 41-147 36-133 (211)
229 3i9f_A Putative type 11 methyl 98.7 4.6E-08 1.6E-12 77.1 8.1 96 38-148 14-114 (170)
230 3tqs_A Ribosomal RNA small sub 98.7 3.4E-08 1.2E-12 85.9 8.0 87 24-119 12-102 (255)
231 4hc4_A Protein arginine N-meth 98.7 6.2E-08 2.1E-12 89.1 9.8 108 30-146 69-189 (376)
232 2vdw_A Vaccinia virus capping 98.7 1.2E-07 4E-12 83.9 10.7 99 42-146 49-169 (302)
233 1ej0_A FTSJ; methyltransferase 98.7 4.6E-08 1.6E-12 75.8 7.0 94 39-146 20-136 (180)
234 2qe6_A Uncharacterized protein 98.6 4E-07 1.4E-11 79.2 13.3 114 30-149 62-199 (274)
235 1vlm_A SAM-dependent methyltra 98.6 8.1E-08 2.8E-12 79.3 8.3 100 29-146 35-139 (219)
236 3c6k_A Spermine synthase; sper 98.6 4.5E-08 1.5E-12 90.5 7.0 102 39-145 203-330 (381)
237 3fut_A Dimethyladenosine trans 98.6 2.1E-07 7.2E-12 81.8 10.9 88 24-121 30-118 (271)
238 3cc8_A Putative methyltransfer 98.6 9.4E-08 3.2E-12 77.8 7.9 94 40-146 31-130 (230)
239 2aot_A HMT, histamine N-methyl 98.6 1.8E-07 6E-12 81.0 9.5 103 41-145 52-171 (292)
240 2a14_A Indolethylamine N-methy 98.6 3.1E-08 1.1E-12 84.8 4.4 101 41-148 55-199 (263)
241 2f8l_A Hypothetical protein LM 98.6 2.8E-07 9.7E-12 82.1 10.6 93 26-122 111-210 (344)
242 1m6y_A S-adenosyl-methyltransf 98.5 1.6E-07 5.5E-12 83.7 8.3 80 39-123 24-108 (301)
243 2plw_A Ribosomal RNA methyltra 98.5 3.7E-07 1.3E-11 73.7 9.4 92 40-145 21-153 (201)
244 4azs_A Methyltransferase WBDD; 98.5 6.3E-07 2.2E-11 85.5 11.4 75 39-120 64-141 (569)
245 3uzu_A Ribosomal RNA small sub 98.5 3.9E-07 1.3E-11 80.3 8.4 78 24-107 25-102 (279)
246 3dou_A Ribosomal RNA large sub 98.5 2.3E-07 8E-12 76.5 6.3 88 40-145 24-138 (191)
247 3lst_A CALO1 methyltransferase 98.4 2.2E-07 7.7E-12 82.6 5.8 99 40-149 183-290 (348)
248 3hp7_A Hemolysin, putative; st 98.4 3.3E-07 1.1E-11 81.7 6.4 110 26-144 67-183 (291)
249 3opn_A Putative hemolysin; str 98.4 3.8E-07 1.3E-11 77.8 6.3 111 24-144 17-135 (232)
250 4a6d_A Hydroxyindole O-methylt 98.4 1.2E-06 4.2E-11 78.5 9.9 103 40-150 178-288 (353)
251 2zfu_A Nucleomethylin, cerebra 98.4 4.5E-07 1.5E-11 74.2 5.7 94 29-147 55-152 (215)
252 1qam_A ERMC' methyltransferase 98.4 6.9E-07 2.4E-11 76.3 7.0 76 24-107 13-88 (244)
253 3pvc_A TRNA 5-methylaminomethy 98.3 1.8E-06 6.3E-11 83.7 10.3 108 40-147 57-212 (689)
254 3giw_A Protein of unknown func 98.3 1.6E-06 5.4E-11 76.9 8.8 118 30-149 63-203 (277)
255 3k0b_A Predicted N6-adenine-sp 98.3 2.3E-06 8E-11 78.6 10.2 94 24-121 184-315 (393)
256 1af7_A Chemotaxis receptor met 98.3 1.3E-06 4.5E-11 76.7 8.1 106 41-146 105-252 (274)
257 2nyu_A Putative ribosomal RNA 98.3 1.5E-06 5.3E-11 69.6 7.9 93 40-146 21-145 (196)
258 2ih2_A Modification methylase 98.3 1.2E-06 4.1E-11 78.9 7.1 82 26-120 24-105 (421)
259 3ldu_A Putative methylase; str 98.3 5.3E-06 1.8E-10 75.9 11.4 95 24-122 178-310 (385)
260 3frh_A 16S rRNA methylase; met 98.2 4.2E-06 1.4E-10 73.4 9.7 107 31-146 95-206 (253)
261 3ftd_A Dimethyladenosine trans 98.2 1.6E-06 5.6E-11 74.7 6.5 89 24-121 14-103 (249)
262 1qyr_A KSGA, high level kasuga 98.2 1.2E-06 4.3E-11 75.8 5.5 75 25-107 5-79 (252)
263 4e2x_A TCAB9; kijanose, tetron 98.2 7E-07 2.4E-11 80.9 3.8 104 30-145 93-207 (416)
264 3ldg_A Putative uncharacterize 98.2 1.1E-05 3.9E-10 73.9 11.2 93 24-120 177-307 (384)
265 3lcv_B Sisomicin-gentamicin re 98.1 4.7E-06 1.6E-10 74.0 7.3 118 28-151 118-243 (281)
266 1fp2_A Isoflavone O-methyltran 98.1 2.9E-06 9.9E-11 75.4 5.6 96 39-148 186-291 (352)
267 2wa2_A Non-structural protein 98.1 7.1E-07 2.4E-11 78.3 1.4 94 41-146 82-193 (276)
268 2oxt_A Nucleoside-2'-O-methylt 98.1 8.5E-07 2.9E-11 77.3 1.7 111 24-146 55-185 (265)
269 2xyq_A Putative 2'-O-methyl tr 98.1 6.4E-06 2.2E-10 73.1 7.1 91 40-146 62-171 (290)
270 1fp1_D Isoliquiritigenin 2'-O- 98.0 5.7E-06 2E-10 74.1 6.5 95 40-148 208-309 (372)
271 3vyw_A MNMC2; tRNA wobble urid 98.0 4E-05 1.4E-09 68.9 11.9 106 40-146 95-226 (308)
272 2p41_A Type II methyltransfera 98.0 2.8E-06 9.6E-11 75.4 4.0 109 25-145 64-190 (305)
273 1zg3_A Isoflavanone 4'-O-methy 98.0 6.6E-06 2.3E-10 73.2 6.3 96 40-149 192-297 (358)
274 3reo_A (ISO)eugenol O-methyltr 98.0 1E-05 3.4E-10 72.9 7.5 96 40-149 202-304 (368)
275 2okc_A Type I restriction enzy 98.0 9.8E-06 3.4E-10 74.9 6.7 123 25-151 155-315 (445)
276 3v97_A Ribosomal RNA large sub 98.0 2E-05 6.9E-10 77.4 9.2 94 24-120 173-310 (703)
277 3p9c_A Caffeic acid O-methyltr 97.9 1.6E-05 5.4E-10 71.5 6.7 96 40-149 200-302 (364)
278 1yub_A Ermam, rRNA methyltrans 97.8 1.3E-06 4.3E-11 74.2 -1.5 88 24-120 12-100 (245)
279 4gqb_A Protein arginine N-meth 97.6 8.2E-05 2.8E-09 72.7 7.6 100 41-146 357-467 (637)
280 2ar0_A M.ecoki, type I restric 97.6 0.00014 4.9E-09 69.3 8.2 123 26-151 154-320 (541)
281 3ps9_A TRNA 5-methylaminomethy 97.6 0.00019 6.6E-09 69.1 9.0 105 43-147 68-220 (676)
282 4fzv_A Putative methyltransfer 97.5 0.00021 7.3E-09 65.2 8.3 88 30-122 137-232 (359)
283 2oo3_A Protein involved in cat 97.4 0.0001 3.5E-09 65.6 4.7 117 25-150 76-203 (283)
284 3ua3_A Protein arginine N-meth 97.4 0.00025 8.5E-09 70.3 6.8 101 42-146 410-534 (745)
285 3lkd_A Type I restriction-modi 97.4 0.0016 5.5E-08 62.3 12.2 94 24-120 200-304 (542)
286 2ld4_A Anamorsin; methyltransf 97.3 0.00011 3.7E-09 58.2 3.0 83 41-147 12-102 (176)
287 1wg8_A Predicted S-adenosylmet 97.1 0.00091 3.1E-08 59.5 6.9 78 40-127 21-103 (285)
288 2k4m_A TR8_protein, UPF0146 pr 96.8 0.0024 8.3E-08 52.0 6.2 82 36-136 29-113 (153)
289 3s1s_A Restriction endonucleas 96.7 0.0058 2E-07 61.5 9.8 95 24-120 298-406 (878)
290 1i4w_A Mitochondrial replicati 96.6 0.0053 1.8E-07 55.9 8.1 77 24-107 35-117 (353)
291 3khk_A Type I restriction-modi 96.6 0.0017 5.7E-08 62.1 5.0 93 24-120 228-336 (544)
292 2zig_A TTHA0409, putative modi 96.1 0.019 6.5E-07 49.9 8.3 47 40-92 234-280 (297)
293 2py6_A Methyltransferase FKBM; 95.8 0.014 4.7E-07 53.5 6.5 52 38-91 223-274 (409)
294 1pqw_A Polyketide synthase; ro 95.5 0.016 5.6E-07 46.4 5.2 93 40-144 37-135 (198)
295 4ej6_A Putative zinc-binding d 95.1 0.059 2E-06 48.0 8.0 101 37-149 178-287 (370)
296 2vn8_A Reticulon-4-interacting 94.8 0.14 4.8E-06 45.4 9.6 94 41-144 183-278 (375)
297 3s2e_A Zinc-containing alcohol 94.7 0.064 2.2E-06 46.8 6.9 96 40-147 165-264 (340)
298 3gms_A Putative NADPH:quinone 94.7 0.029 9.9E-07 49.1 4.6 97 40-147 143-244 (340)
299 2dph_A Formaldehyde dismutase; 94.6 0.047 1.6E-06 49.0 6.0 95 40-144 184-297 (398)
300 1gu7_A Enoyl-[acyl-carrier-pro 94.4 0.079 2.7E-06 46.6 6.7 98 43-147 169-276 (364)
301 3nx4_A Putative oxidoreductase 94.3 0.17 5.8E-06 43.6 8.6 91 44-147 149-242 (324)
302 3fpc_A NADP-dependent alcohol 94.3 0.036 1.2E-06 48.8 4.4 98 39-148 164-268 (352)
303 1iz0_A Quinone oxidoreductase; 94.2 0.087 3E-06 45.2 6.5 90 41-144 125-216 (302)
304 3tka_A Ribosomal RNA small sub 94.1 0.056 1.9E-06 49.3 5.3 77 43-126 59-141 (347)
305 3uko_A Alcohol dehydrogenase c 94.0 0.12 4E-06 45.9 7.2 96 41-148 193-297 (378)
306 3qwb_A Probable quinone oxidor 94.0 0.053 1.8E-06 47.2 4.8 95 40-146 147-247 (334)
307 1g55_A DNA cytosine methyltran 94.0 0.098 3.3E-06 46.7 6.6 97 42-147 2-120 (343)
308 1pl8_A Human sorbitol dehydrog 93.9 0.38 1.3E-05 42.3 10.3 96 39-146 169-273 (356)
309 1xa0_A Putative NADPH dependen 93.9 0.11 3.9E-06 44.9 6.7 92 43-147 151-247 (328)
310 1kol_A Formaldehyde dehydrogen 93.8 0.15 5.3E-06 45.4 7.6 97 40-146 184-300 (398)
311 3ip1_A Alcohol dehydrogenase, 93.8 0.15 5.2E-06 45.8 7.6 98 41-148 213-320 (404)
312 4auk_A Ribosomal RNA large sub 93.6 0.32 1.1E-05 44.6 9.3 86 24-123 184-280 (375)
313 3jyn_A Quinone oxidoreductase; 93.6 0.099 3.4E-06 45.4 5.7 95 41-147 140-240 (325)
314 2c0c_A Zinc binding alcohol de 93.5 0.13 4.5E-06 45.5 6.6 95 39-145 161-260 (362)
315 1f8f_A Benzyl alcohol dehydrog 93.5 0.16 5.3E-06 44.9 7.0 96 41-148 190-291 (371)
316 4eez_A Alcohol dehydrogenase 1 93.5 0.48 1.6E-05 41.1 10.0 96 41-147 163-264 (348)
317 1g60_A Adenine-specific methyl 93.4 0.026 8.9E-07 48.1 1.6 49 97-145 5-73 (260)
318 1wly_A CAAR, 2-haloacrylate re 93.4 0.094 3.2E-06 45.6 5.3 94 40-145 144-243 (333)
319 3fwz_A Inner membrane protein 93.3 0.2 6.8E-06 38.2 6.5 91 43-144 8-103 (140)
320 4ggo_A Trans-2-enoyl-COA reduc 93.3 0.49 1.7E-05 43.8 10.1 82 39-124 47-151 (401)
321 1uuf_A YAHK, zinc-type alcohol 93.3 0.28 9.5E-06 43.6 8.3 92 40-144 193-286 (369)
322 4a2c_A Galactitol-1-phosphate 93.3 0.45 1.6E-05 41.2 9.5 105 36-151 155-265 (346)
323 4b7c_A Probable oxidoreductase 93.3 0.13 4.4E-06 44.7 6.0 97 38-145 146-247 (336)
324 1e3i_A Alcohol dehydrogenase, 93.2 0.25 8.6E-06 43.7 7.9 93 42-146 196-297 (376)
325 1piw_A Hypothetical zinc-type 93.1 0.18 6.3E-06 44.4 6.9 93 40-144 178-274 (360)
326 1v3u_A Leukotriene B4 12- hydr 93.1 0.21 7.3E-06 43.2 7.1 94 40-145 144-243 (333)
327 4eye_A Probable oxidoreductase 93.1 0.14 4.7E-06 45.0 5.9 93 40-145 158-256 (342)
328 1p0f_A NADP-dependent alcohol 93.1 0.25 8.7E-06 43.6 7.7 95 41-147 191-294 (373)
329 1pjc_A Protein (L-alanine dehy 93.0 0.26 8.7E-06 44.1 7.7 99 40-148 165-268 (361)
330 4dup_A Quinone oxidoreductase; 93.0 0.16 5.5E-06 44.7 6.2 95 40-146 166-265 (353)
331 1qor_A Quinone oxidoreductase; 92.9 0.12 4.2E-06 44.7 5.2 93 41-145 140-238 (327)
332 4dvj_A Putative zinc-dependent 92.8 0.92 3.2E-05 40.0 11.0 91 43-144 173-268 (363)
333 1tt7_A YHFP; alcohol dehydroge 92.8 0.17 5.8E-06 43.8 6.0 91 44-147 153-248 (330)
334 3kto_A Response regulator rece 92.7 0.65 2.2E-05 34.0 8.4 64 69-134 6-75 (136)
335 1e3j_A NADP(H)-dependent ketos 92.6 0.88 3E-05 39.7 10.5 96 39-146 166-271 (352)
336 3r24_A NSP16, 2'-O-methyl tran 92.6 0.21 7.2E-06 45.1 6.4 90 43-151 111-221 (344)
337 2hcy_A Alcohol dehydrogenase 1 92.5 0.33 1.1E-05 42.4 7.5 95 41-146 169-269 (347)
338 3g7u_A Cytosine-specific methy 92.5 0.39 1.3E-05 43.5 8.2 92 44-147 4-120 (376)
339 3pi7_A NADH oxidoreductase; gr 92.4 0.4 1.4E-05 41.9 8.0 93 43-146 166-263 (349)
340 3gqv_A Enoyl reductase; medium 92.4 0.88 3E-05 40.3 10.3 95 40-146 163-263 (371)
341 1boo_A Protein (N-4 cytosine-s 92.3 0.11 3.7E-06 45.9 4.1 48 97-144 15-82 (323)
342 3m6i_A L-arabinitol 4-dehydrog 92.2 0.66 2.2E-05 40.7 9.1 98 38-146 176-283 (363)
343 1cdo_A Alcohol dehydrogenase; 92.1 0.56 1.9E-05 41.3 8.6 95 41-147 192-295 (374)
344 2eih_A Alcohol dehydrogenase; 92.0 0.35 1.2E-05 42.2 7.0 92 41-144 166-263 (343)
345 3evf_A RNA-directed RNA polyme 91.9 0.054 1.9E-06 47.9 1.7 116 24-149 55-186 (277)
346 3gaz_A Alcohol dehydrogenase s 91.9 0.41 1.4E-05 41.9 7.3 91 40-144 149-244 (343)
347 3eod_A Protein HNR; response r 91.8 0.78 2.7E-05 32.9 7.8 65 69-135 7-75 (130)
348 1eg2_A Modification methylase 91.8 0.15 5.2E-06 45.2 4.5 49 97-145 39-105 (319)
349 1vj0_A Alcohol dehydrogenase, 91.7 0.26 8.9E-06 43.9 5.9 93 42-146 196-298 (380)
350 3sju_A Keto reductase; short-c 91.6 0.91 3.1E-05 38.4 9.1 80 39-122 21-110 (279)
351 3lte_A Response regulator; str 91.6 1.2 4.1E-05 31.9 8.6 65 69-135 6-74 (132)
352 2qxy_A Response regulator; reg 91.5 0.7 2.4E-05 33.8 7.4 51 69-121 4-56 (142)
353 3hv2_A Response regulator/HD d 91.4 0.78 2.7E-05 34.2 7.6 65 68-134 13-81 (153)
354 3goh_A Alcohol dehydrogenase, 91.4 0.33 1.1E-05 41.7 6.2 87 41-145 142-228 (315)
355 3to5_A CHEY homolog; alpha(5)b 91.3 0.23 7.8E-06 38.5 4.6 71 63-134 6-80 (134)
356 2b5w_A Glucose dehydrogenase; 91.2 0.25 8.5E-06 43.5 5.3 92 43-147 174-274 (357)
357 3hdv_A Response regulator; PSI 91.2 1.3 4.4E-05 32.0 8.5 65 69-135 7-76 (136)
358 3f6c_A Positive transcription 91.2 0.57 2E-05 33.8 6.5 65 71-136 3-71 (134)
359 1y6j_A L-lactate dehydrogenase 91.2 0.86 2.9E-05 40.1 8.7 78 41-124 6-85 (318)
360 2jhf_A Alcohol dehydrogenase E 91.1 0.72 2.4E-05 40.7 8.1 94 41-146 191-293 (374)
361 1id1_A Putative potassium chan 91.0 0.82 2.8E-05 35.0 7.5 96 41-144 2-103 (153)
362 1yb5_A Quinone oxidoreductase; 91.0 0.35 1.2E-05 42.6 6.0 93 40-144 169-267 (351)
363 2j8z_A Quinone oxidoreductase; 90.9 0.33 1.1E-05 42.7 5.8 94 41-146 162-261 (354)
364 1rjw_A ADH-HT, alcohol dehydro 90.9 0.6 2E-05 40.7 7.4 94 40-145 163-260 (339)
365 3snk_A Response regulator CHEY 90.9 0.66 2.3E-05 33.8 6.6 64 69-134 14-82 (135)
366 3llv_A Exopolyphosphatase-rela 90.9 0.33 1.1E-05 36.5 5.0 69 43-122 7-79 (141)
367 4dzz_A Plasmid partitioning pr 90.8 0.17 5.8E-06 40.1 3.4 91 52-146 13-107 (206)
368 2fzw_A Alcohol dehydrogenase c 90.8 0.83 2.8E-05 40.2 8.3 95 41-147 190-293 (373)
369 3cg4_A Response regulator rece 90.7 1.6 5.5E-05 31.7 8.6 65 68-134 6-74 (142)
370 2j3h_A NADP-dependent oxidored 90.7 0.41 1.4E-05 41.5 6.2 94 40-144 154-253 (345)
371 2zb4_A Prostaglandin reductase 90.7 0.46 1.6E-05 41.5 6.5 92 43-145 162-259 (357)
372 2b4a_A BH3024; flavodoxin-like 90.7 2.4 8.2E-05 30.7 9.6 67 68-136 14-85 (138)
373 2rjn_A Response regulator rece 90.7 1.2 4.1E-05 33.1 8.1 65 69-135 7-75 (154)
374 1qkk_A DCTD, C4-dicarboxylate 90.6 1.5 5.3E-05 32.5 8.6 63 70-134 4-70 (155)
375 3i42_A Response regulator rece 90.6 1.1 3.9E-05 31.9 7.6 63 70-134 4-70 (127)
376 3uog_A Alcohol dehydrogenase; 90.5 1.1 3.7E-05 39.5 8.8 95 41-148 189-289 (363)
377 3fbg_A Putative arginate lyase 90.5 0.4 1.4E-05 41.9 5.9 92 41-144 150-246 (346)
378 3gt7_A Sensor protein; structu 90.5 0.52 1.8E-05 35.5 5.8 64 69-134 7-74 (154)
379 1jvb_A NAD(H)-dependent alcoho 90.4 0.46 1.6E-05 41.5 6.2 97 39-145 168-270 (347)
380 2qr3_A Two-component system re 90.4 0.7 2.4E-05 33.5 6.3 63 70-134 4-75 (140)
381 3lua_A Response regulator rece 90.4 1.8 6.3E-05 31.4 8.7 64 69-134 4-74 (140)
382 3cg0_A Response regulator rece 90.3 0.77 2.6E-05 33.3 6.5 66 68-134 8-78 (140)
383 2c7p_A Modification methylase 90.3 1 3.5E-05 39.9 8.4 93 41-147 10-121 (327)
384 2v6b_A L-LDH, L-lactate dehydr 90.2 2.2 7.6E-05 37.0 10.5 97 44-146 2-117 (304)
385 3grc_A Sensor protein, kinase; 90.2 1.7 5.8E-05 31.5 8.4 64 69-134 6-73 (140)
386 2d8a_A PH0655, probable L-thre 90.2 0.33 1.1E-05 42.4 5.1 93 41-145 167-266 (348)
387 3ucx_A Short chain dehydrogena 90.1 2.5 8.5E-05 35.2 10.3 79 40-122 9-97 (264)
388 3hzh_A Chemotaxis response reg 90.0 0.72 2.5E-05 34.7 6.3 63 71-134 38-106 (157)
389 3c85_A Putative glutathione-re 90.0 0.65 2.2E-05 36.5 6.2 91 43-144 40-137 (183)
390 4fn4_A Short chain dehydrogena 90.0 1.5 5.3E-05 37.4 9.1 78 41-122 6-93 (254)
391 3krt_A Crotonyl COA reductase; 90.0 0.36 1.2E-05 44.1 5.4 95 40-146 227-344 (456)
392 3f6p_A Transcriptional regulat 89.9 2.5 8.4E-05 30.1 8.9 63 70-134 3-69 (120)
393 1bg6_A N-(1-D-carboxylethyl)-L 89.8 3.8 0.00013 35.2 11.6 94 41-145 3-108 (359)
394 3eul_A Possible nitrate/nitrit 89.8 1.5 5.1E-05 32.5 7.8 69 67-136 13-86 (152)
395 1zsy_A Mitochondrial 2-enoyl t 89.7 1.1 3.8E-05 39.3 8.1 97 40-145 166-269 (357)
396 1lld_A L-lactate dehydrogenase 89.6 3.5 0.00012 35.3 11.1 77 41-122 6-84 (319)
397 3a10_A Response regulator; pho 89.5 1.3 4.4E-05 31.0 7.0 62 71-134 3-68 (116)
398 3gl9_A Response regulator; bet 89.4 0.71 2.4E-05 33.2 5.6 63 70-134 3-69 (122)
399 2g1u_A Hypothetical protein TM 89.4 0.83 2.8E-05 35.1 6.3 96 39-144 16-116 (155)
400 3ggo_A Prephenate dehydrogenas 89.3 2.4 8.1E-05 37.1 9.9 92 43-146 34-127 (314)
401 3jv7_A ADH-A; dehydrogenase, n 89.2 0.88 3E-05 39.5 7.1 97 39-147 169-271 (345)
402 2zay_A Response regulator rece 89.2 1.1 3.7E-05 32.9 6.7 64 69-134 8-75 (147)
403 3fi9_A Malate dehydrogenase; s 89.2 3.3 0.00011 37.1 11.0 76 41-122 7-85 (343)
404 3pqe_A L-LDH, L-lactate dehydr 89.2 3.6 0.00012 36.5 11.1 77 40-122 3-82 (326)
405 3crn_A Response regulator rece 89.1 1.4 5E-05 31.8 7.2 63 70-134 4-70 (132)
406 3two_A Mannitol dehydrogenase; 89.1 2.2 7.5E-05 37.1 9.6 93 38-147 173-266 (348)
407 1g60_A Adenine-specific methyl 89.1 1 3.5E-05 38.1 7.2 49 40-95 211-259 (260)
408 3kht_A Response regulator; PSI 89.1 1.8 6.3E-05 31.6 7.8 66 69-135 5-75 (144)
409 1ldn_A L-lactate dehydrogenase 88.9 4.1 0.00014 35.5 11.2 80 40-125 4-86 (316)
410 3ufb_A Type I restriction-modi 88.9 0.89 3E-05 43.0 7.3 93 25-120 201-309 (530)
411 2vhw_A Alanine dehydrogenase; 88.8 0.59 2E-05 42.1 5.7 95 40-143 166-265 (377)
412 3ic5_A Putative saccharopine d 88.8 1.3 4.4E-05 31.4 6.6 68 43-121 6-77 (118)
413 2h6e_A ADH-4, D-arabinose 1-de 88.7 0.86 2.9E-05 39.7 6.6 94 41-145 170-268 (344)
414 1lss_A TRK system potassium up 88.7 3.2 0.00011 30.2 9.0 91 43-143 5-100 (140)
415 2rhc_B Actinorhodin polyketide 88.6 2.1 7.1E-05 36.0 8.8 79 40-122 20-108 (277)
416 2gkg_A Response regulator homo 88.6 1.3 4.5E-05 31.1 6.5 73 70-144 6-86 (127)
417 3cwq_A Para family chromosome 88.5 0.96 3.3E-05 36.7 6.4 68 51-124 11-78 (209)
418 3cnb_A DNA-binding response re 88.3 3.1 0.00011 29.9 8.6 66 69-135 8-78 (143)
419 3h5i_A Response regulator/sens 88.2 2.2 7.5E-05 31.2 7.7 64 69-134 5-74 (140)
420 1tmy_A CHEY protein, TMY; chem 88.2 1.5 5.2E-05 30.8 6.6 64 70-134 3-70 (120)
421 1dbw_A Transcriptional regulat 88.1 3.2 0.00011 29.5 8.4 74 69-144 3-81 (126)
422 2eez_A Alanine dehydrogenase; 88.0 0.89 3.1E-05 40.6 6.4 95 40-144 164-264 (369)
423 2j48_A Two-component sensor ki 87.9 0.93 3.2E-05 31.2 5.2 63 70-134 2-68 (119)
424 3lyl_A 3-oxoacyl-(acyl-carrier 87.9 2.7 9.3E-05 34.2 8.9 78 41-122 4-91 (247)
425 2qzj_A Two-component response 87.9 2.2 7.7E-05 31.1 7.6 74 69-144 4-81 (136)
426 2zig_A TTHA0409, putative modi 87.8 0.57 2E-05 40.4 4.9 25 97-121 22-48 (297)
427 3cz5_A Two-component response 87.8 1.4 4.9E-05 32.6 6.5 65 69-134 5-74 (153)
428 1srr_A SPO0F, sporulation resp 87.7 1.8 6.1E-05 30.7 6.8 63 70-134 4-70 (124)
429 3gaf_A 7-alpha-hydroxysteroid 87.6 2 7E-05 35.6 8.1 78 41-122 11-98 (256)
430 2jba_A Phosphate regulon trans 87.6 2.2 7.5E-05 30.2 7.2 63 70-134 3-69 (127)
431 3gcz_A Polyprotein; flavivirus 87.5 0.18 6.1E-06 44.7 1.4 115 25-149 72-203 (282)
432 2qv0_A Protein MRKE; structura 87.5 4.1 0.00014 29.5 8.9 76 69-144 9-89 (143)
433 3tqh_A Quinone oxidoreductase; 87.5 2.6 9E-05 36.1 8.9 94 38-145 149-244 (321)
434 3b1f_A Putative prephenate deh 87.2 2.4 8.1E-05 35.8 8.3 93 40-143 4-98 (290)
435 2rdm_A Response regulator rece 87.1 2.2 7.6E-05 30.3 7.1 65 69-135 5-75 (132)
436 4a0s_A Octenoyl-COA reductase/ 87.1 1.4 4.9E-05 39.8 7.3 95 40-146 219-336 (447)
437 3f1l_A Uncharacterized oxidore 87.0 3 0.0001 34.4 8.6 78 41-122 11-101 (252)
438 3n0r_A Response regulator; sig 86.9 2 6.9E-05 36.8 7.8 56 68-124 159-216 (286)
439 1yb1_A 17-beta-hydroxysteroid 86.9 3.1 0.0001 34.7 8.8 79 40-122 29-117 (272)
440 3jte_A Response regulator rece 86.9 2.2 7.4E-05 31.0 7.0 63 70-134 4-72 (143)
441 4e7p_A Response regulator; DNA 86.8 3.2 0.00011 30.6 8.0 66 70-136 21-91 (150)
442 3r1i_A Short-chain type dehydr 86.8 2.8 9.5E-05 35.4 8.5 79 40-122 30-118 (276)
443 3sx2_A Putative 3-ketoacyl-(ac 86.8 3.7 0.00013 34.1 9.2 80 40-123 11-112 (278)
444 3vku_A L-LDH, L-lactate dehydr 86.7 7 0.00024 34.7 11.4 77 41-123 8-86 (326)
445 1yio_A Response regulatory pro 86.7 3.4 0.00012 32.3 8.5 65 69-135 4-72 (208)
446 2zat_A Dehydrogenase/reductase 86.7 3.6 0.00012 33.9 9.0 78 41-122 13-100 (260)
447 2dq4_A L-threonine 3-dehydroge 86.7 0.29 9.9E-06 42.7 2.3 94 41-145 164-261 (343)
448 3la6_A Tyrosine-protein kinase 86.6 0.75 2.6E-05 39.8 4.9 41 41-81 91-133 (286)
449 4dad_A Putative pilus assembly 86.5 1.1 3.6E-05 33.0 5.1 55 69-125 20-79 (146)
450 2xxj_A L-LDH, L-lactate dehydr 86.5 8.2 0.00028 33.6 11.6 75 44-124 2-78 (310)
451 2ew2_A 2-dehydropantoate 2-red 86.4 6.7 0.00023 32.8 10.7 93 43-144 4-106 (316)
452 3qiv_A Short-chain dehydrogena 86.4 2 7E-05 35.1 7.3 79 41-123 8-96 (253)
453 2aef_A Calcium-gated potassium 86.3 2.9 0.0001 34.1 8.2 91 41-144 8-103 (234)
454 3c3m_A Response regulator rece 86.2 1.5 5E-05 32.1 5.7 63 70-134 4-70 (138)
455 3pxx_A Carveol dehydrogenase; 86.2 4.7 0.00016 33.5 9.5 78 41-122 9-108 (287)
456 2c07_A 3-oxoacyl-(acyl-carrier 86.1 5.2 0.00018 33.5 9.9 79 41-123 43-131 (285)
457 3v8b_A Putative dehydrogenase, 85.9 3.9 0.00013 34.6 9.0 78 41-122 27-114 (283)
458 3k9g_A PF-32 protein; ssgcid, 85.9 4.1 0.00014 33.7 9.0 41 40-81 25-67 (267)
459 4g81_D Putative hexonate dehyd 85.9 2.5 8.6E-05 36.1 7.8 78 41-122 8-95 (255)
460 3ftp_A 3-oxoacyl-[acyl-carrier 85.8 3.2 0.00011 34.9 8.4 79 40-122 26-114 (270)
461 3t6k_A Response regulator rece 85.8 1.6 5.3E-05 32.0 5.7 63 70-134 5-71 (136)
462 3cfy_A Putative LUXO repressor 85.8 1.8 6.2E-05 31.7 6.1 65 70-136 5-73 (137)
463 3svt_A Short-chain type dehydr 85.8 4.3 0.00015 33.9 9.2 79 41-123 10-101 (281)
464 1h2b_A Alcohol dehydrogenase; 85.5 2.1 7.3E-05 37.5 7.4 96 40-146 185-285 (359)
465 1ez4_A Lactate dehydrogenase; 85.5 8 0.00027 33.9 11.1 79 41-125 4-84 (318)
466 1a5z_A L-lactate dehydrogenase 85.5 7.6 0.00026 33.7 10.9 76 44-125 2-79 (319)
467 1zgz_A Torcad operon transcrip 85.5 6.1 0.00021 27.6 8.6 73 70-144 3-79 (122)
468 2a9o_A Response regulator; ess 85.4 3 0.0001 29.0 6.9 72 71-144 3-78 (120)
469 3cxt_A Dehydrogenase with diff 85.4 2.9 9.8E-05 35.7 8.0 79 40-122 32-120 (291)
470 2g5c_A Prephenate dehydrogenas 85.4 5.2 0.00018 33.4 9.5 91 43-143 2-93 (281)
471 3kcn_A Adenylate cyclase homol 85.2 3.7 0.00013 30.3 7.7 64 69-135 4-72 (151)
472 2ae2_A Protein (tropinone redu 85.2 6.5 0.00022 32.3 9.9 78 41-122 8-96 (260)
473 1mvo_A PHOP response regulator 85.2 3.1 0.00011 29.8 7.1 63 70-134 4-70 (136)
474 3rqi_A Response regulator prot 85.2 1.4 4.7E-05 34.3 5.4 64 69-134 7-74 (184)
475 2lpm_A Two-component response 85.2 0.33 1.1E-05 37.2 1.7 53 69-122 8-62 (123)
476 1zem_A Xylitol dehydrogenase; 85.2 3 0.0001 34.5 7.8 78 41-122 6-93 (262)
477 4e12_A Diketoreductase; oxidor 85.2 6.9 0.00024 33.1 10.3 97 41-147 3-121 (283)
478 3t4x_A Oxidoreductase, short c 85.2 5.1 0.00018 33.3 9.3 78 41-122 9-94 (267)
479 3m6m_D Sensory/regulatory prot 85.1 1.4 4.7E-05 32.7 5.1 64 69-134 14-81 (143)
480 1s8n_A Putative antiterminator 85.0 3.2 0.00011 32.5 7.6 74 70-144 14-91 (205)
481 4egf_A L-xylulose reductase; s 85.0 4.2 0.00014 33.9 8.6 78 41-122 19-107 (266)
482 2cf5_A Atccad5, CAD, cinnamyl 84.9 4.6 0.00016 35.2 9.3 92 41-145 180-274 (357)
483 1yqd_A Sinapyl alcohol dehydro 84.8 8 0.00027 33.9 10.8 91 41-144 187-280 (366)
484 3rih_A Short chain dehydrogena 84.6 2.3 7.8E-05 36.4 7.0 79 40-122 39-128 (293)
485 3awd_A GOX2181, putative polyo 84.5 3.8 0.00013 33.4 8.0 78 41-122 12-99 (260)
486 4ibo_A Gluconate dehydrogenase 84.5 2.7 9.1E-05 35.4 7.2 79 40-122 24-112 (271)
487 1hyh_A L-hicdh, L-2-hydroxyiso 84.4 11 0.00037 32.4 11.3 77 43-125 2-81 (309)
488 1t2d_A LDH-P, L-lactate dehydr 84.4 8.4 0.00029 33.8 10.7 74 41-121 3-80 (322)
489 3ioy_A Short-chain dehydrogena 84.4 4.4 0.00015 35.0 8.8 79 41-123 7-97 (319)
490 4eue_A Putative reductase CA_C 84.3 6.1 0.00021 36.3 10.1 82 40-123 58-161 (418)
491 1boo_A Protein (N-4 cytosine-s 84.2 0.49 1.7E-05 41.6 2.5 63 41-110 252-314 (323)
492 2pl1_A Transcriptional regulat 84.1 4.6 0.00016 28.1 7.4 62 71-134 2-67 (121)
493 1ae1_A Tropinone reductase-I; 84.1 4.1 0.00014 34.0 8.2 78 41-122 20-108 (273)
494 3osu_A 3-oxoacyl-[acyl-carrier 84.1 5.2 0.00018 32.7 8.7 78 41-122 3-91 (246)
495 2jah_A Clavulanic acid dehydro 84.1 3.5 0.00012 33.9 7.7 78 41-122 6-93 (247)
496 1mb3_A Cell division response 84.1 1.5 5.2E-05 30.9 4.8 62 71-134 3-68 (124)
497 4da9_A Short-chain dehydrogena 83.9 6.1 0.00021 33.2 9.3 79 41-123 28-117 (280)
498 3pk0_A Short-chain dehydrogena 83.9 4.9 0.00017 33.3 8.6 79 40-122 8-97 (262)
499 3t7c_A Carveol dehydrogenase; 83.9 6.5 0.00022 33.3 9.5 79 40-122 26-126 (299)
500 3i1j_A Oxidoreductase, short c 83.9 2.7 9.2E-05 34.1 6.8 80 40-123 12-104 (247)
No 1
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=7.7e-34 Score=241.87 Aligned_cols=176 Identities=15% Similarity=0.249 Sum_probs=146.4
Q ss_pred hHHHHHHHHhhcccC---------------CCCcHHHHHHHHHHHHhcCCC---eEEEEccCcchHHHHHHHHHhcCCCC
Q 027409 8 DAASKAYIDTVKSCE---------------NIKESGVAELLSAMAAGWNAK---LIVEAWTHGGPITTSIGLAIAARHTC 69 (223)
Q Consensus 8 ~~a~~ayl~~l~~~~---------------~ii~p~~g~fL~~L~~~~~ak---~ILEIGT~~Gys~Stl~la~A~~~~~ 69 (223)
..+..+|+.++.+.. .+++|++++||..|++..+++ +|||||||+|| ++++||.+. +++
T Consensus 5 ~~~~~~y~~~~~~~~~~l~~~~~~a~~~~~p~i~~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~--~~~~la~~~-~~~ 81 (221)
T 3dr5_A 5 FEYLRTYVESTTETDAAVARAREDAAEFGLPAPDEMTGQLLTTLAATTNGNGSTGAIAITPAAGL--VGLYILNGL-ADN 81 (221)
T ss_dssp HHHHHHHHHTTSCCCHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHSCCTTCCEEEEESTTHHH--HHHHHHHHS-CTT
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhCCCCCCCEEEEcCCchH--HHHHHHHhC-CCC
Confidence 344567777765432 278999999999999999999 99999999999 899998764 457
Q ss_pred cEEEEEeCCchHHHHHHHHHHhhcCce---EEEEecchHHHhcCC--CCccEEEEeCCCcccHHHHHHh-ccCCCceEEE
Q 027409 70 ARHVCIVPDERSRLAYVKAMYDVVGWV---SEVIVRQAEEVMGEL--KGVDFLVVDCTSKDFARVLRFA-RFSNKGAVLA 143 (223)
Q Consensus 70 g~i~TIE~d~e~~~~Ar~~~~~a~G~~---I~li~GdA~evL~~L--~~fDfVFIDa~K~~Y~~~f~~~-~~l~~GgvIV 143 (223)
|+|++||+++++++.|+++++++ |+. |+++.|||.+.++.+ ++||+||+|+++.+|.++|+.+ +.|+|||+|+
T Consensus 82 ~~v~~vD~~~~~~~~a~~~~~~~-g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv 160 (221)
T 3dr5_A 82 TTLTCIDPESEHQRQAKALFREA-GYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQVSPMDLKALVDAAWPLLRRGGALV 160 (221)
T ss_dssp SEEEEECSCHHHHHHHHHHHHHT-TCCGGGEEEECSCHHHHGGGSCTTCEEEEEECCCTTTHHHHHHHHHHHEEEEEEEE
T ss_pred CEEEEEECCHHHHHHHHHHHHHc-CCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEcCcHHHHHHHHHHHHHHcCCCcEEE
Confidence 99999999999999999999999 875 999999999999887 4899999999999999999866 6779999999
Q ss_pred EeCCCCCCc-cccccccc---------cccccCCCceEEEEeecCCceEEEEEcc
Q 027409 144 FKNAFQRST-SGLRWQGQ---------GVLDRGTRVVRSVFLPVGQGLDIVHVGS 188 (223)
Q Consensus 144 ~DNvl~~g~-~~~~~~~r---------~~v~~~~~~~~t~lLPiGDGl~vs~k~~ 188 (223)
+||++++|. .+...+.+ ..++ .++++++++||+|||++++++-+
T Consensus 161 ~dn~~~~g~v~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~lp~gdGl~~~~~~~ 214 (221)
T 3dr5_A 161 LADALLDGTIADQTRKDRDTQAARDADEYIR-SIEGAHVARLPLGAGLTVVTKAL 214 (221)
T ss_dssp ETTTTGGGTCSCSSCCCHHHHHHHHHHHHHT-TCTTEEEEEESSTTCEEEEEECC
T ss_pred EeCCCCCCcCCCCCCCChHHHHHHHHHHHHh-hCCCeeEEEeeccchHHHHHHHH
Confidence 999998764 11111110 1233 44779999999999999999864
No 2
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=100.00 E-value=1.7e-32 Score=236.21 Aligned_cols=163 Identities=13% Similarity=0.136 Sum_probs=136.8
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEe
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIV 101 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~ 101 (223)
.++|++++||..|+...++++|||||||+|| ++++||.+. +++|+|++||+++++++.|+++++++ |+. |+++.
T Consensus 43 ~i~~~~~~~l~~l~~~~~~~~VLDiG~G~G~--~t~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~-g~~~~i~~~~ 118 (242)
T 3r3h_A 43 QVAPEQAQFMQMLIRLTRAKKVLELGTFTGY--SALAMSLAL-PDDGQVITCDINEGWTKHAHPYWREA-KQEHKIKLRL 118 (242)
T ss_dssp SCCHHHHHHHHHHHHHHTCSEEEEEESCCSH--HHHHHHHTS-CTTCEEEEEECCCSSCCCSHHHHHHT-TCTTTEEEEE
T ss_pred ccCHHHHHHHHHHHhhcCcCEEEEeeCCcCH--HHHHHHHhC-CCCCEEEEEECCHHHHHHHHHHHHHc-CCCCcEEEEE
Confidence 4899999999999999999999999999999 899998764 44799999999999999999999999 986 99999
Q ss_pred cchHHHhcCC------CCccEEEEeCCCcccHHHHHHh-ccCCCceEEEEeCCCCCCc--cc-c---------ccccccc
Q 027409 102 RQAEEVMGEL------KGVDFLVVDCTSKDFARVLRFA-RFSNKGAVLAFKNAFQRST--SG-L---------RWQGQGV 162 (223)
Q Consensus 102 GdA~evL~~L------~~fDfVFIDa~K~~Y~~~f~~~-~~l~~GgvIV~DNvl~~g~--~~-~---------~~~~r~~ 162 (223)
|||.+.++.+ +.||+||+|+++.+|..+|+.+ +.|+|||+|++||+++.|. +. . .++. .
T Consensus 119 gda~~~l~~~~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~--~ 196 (242)
T 3r3h_A 119 GPALDTLHSLLNEGGEHQFDFIFIDADKTNYLNYYELALKLVTPKGLIAIDNIFWDGKVIDPNDTSGQTREIKKLNQ--V 196 (242)
T ss_dssp SCHHHHHHHHHHHHCSSCEEEEEEESCGGGHHHHHHHHHHHEEEEEEEEEECSSSSSCSSCTTCCCHHHHHHHHHHH--H
T ss_pred cCHHHHHHHHhhccCCCCEeEEEEcCChHHhHHHHHHHHHhcCCCeEEEEECCccCCcccCccccChHHHHHHHHHH--H
Confidence 9999998875 5899999999999999999865 6779999999999998774 11 0 0111 2
Q ss_pred cccCCCceEEEEeecCCceEEEEEcccCCCC
Q 027409 163 LDRGTRVVRSVFLPVGQGLDIVHVGSTSGSG 193 (223)
Q Consensus 163 v~~~~~~~~t~lLPiGDGl~vs~k~~~~~~~ 193 (223)
+. .+++++++++|+|||+++++|+..++-.
T Consensus 197 l~-~~~~~~~~~lp~~dG~~~~~k~~~~~~~ 226 (242)
T 3r3h_A 197 IK-NDSRVFVSLLAIADGMFLVQPIAENLYF 226 (242)
T ss_dssp HH-TCCSEEEEEESSSSCEEEEEEC------
T ss_pred Hh-hCCCEEEEEEEccCceEEEEEcCCCcch
Confidence 33 3477999999999999999998655444
No 3
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.97 E-value=2.2e-31 Score=227.66 Aligned_cols=159 Identities=18% Similarity=0.167 Sum_probs=135.4
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEe
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIV 101 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~ 101 (223)
.++|+++++|..|++..++++|||||||+|| +++++|.+. +++++|+++|+++++++.|+++++++ |+. |+++.
T Consensus 53 ~~~~~~~~~l~~l~~~~~~~~VLeiG~G~G~--~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~-g~~~~i~~~~ 128 (237)
T 3c3y_A 53 STSPLAGQLMSFVLKLVNAKKTIEVGVFTGY--SLLLTALSI-PDDGKITAIDFDREAYEIGLPFIRKA-GVEHKINFIE 128 (237)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEECCTTSH--HHHHHHHHS-CTTCEEEEEESCHHHHHHHHHHHHHT-TCGGGEEEEE
T ss_pred CcCHHHHHHHHHHHHhhCCCEEEEeCCCCCH--HHHHHHHhC-CCCCEEEEEECCHHHHHHHHHHHHHc-CCCCcEEEEE
Confidence 6799999999999999999999999999999 888998764 45799999999999999999999999 986 99999
Q ss_pred cchHHHhcCC-------CCccEEEEeCCCcccHHHHHHh-ccCCCceEEEEeCCCCCCc--cc---cccccc-------c
Q 027409 102 RQAEEVMGEL-------KGVDFLVVDCTSKDFARVLRFA-RFSNKGAVLAFKNAFQRST--SG---LRWQGQ-------G 161 (223)
Q Consensus 102 GdA~evL~~L-------~~fDfVFIDa~K~~Y~~~f~~~-~~l~~GgvIV~DNvl~~g~--~~---~~~~~r-------~ 161 (223)
|||.+.++.+ +.||+||+|+++.+|..+|+.+ +.++|||+|++||+++.|. .. ...+.+ .
T Consensus 129 gda~~~l~~l~~~~~~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d~~~~~g~~~~~~~~~~~~~r~~~~~i~~ 208 (237)
T 3c3y_A 129 SDAMLALDNLLQGQESEGSYDFGFVDADKPNYIKYHERLMKLVKVGGIVAYDNTLWGGTVAQPESEVPDFMKENREAVIE 208 (237)
T ss_dssp SCHHHHHHHHHHSTTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECTTGGGGGGSCGGGSCGGGHHHHHHHHH
T ss_pred cCHHHHHHHHHhccCCCCCcCEEEECCchHHHHHHHHHHHHhcCCCeEEEEecCCcCCccCCCcccchhhHHHHHHHHHH
Confidence 9999988754 4799999999999999999866 5679999999999998764 11 000000 0
Q ss_pred ---ccccCCCceEEEEeecCCceEEEEEc
Q 027409 162 ---VLDRGTRVVRSVFLPVGQGLDIVHVG 187 (223)
Q Consensus 162 ---~v~~~~~~~~t~lLPiGDGl~vs~k~ 187 (223)
.+. .++++.++++|+|||+++++|+
T Consensus 209 ~~~~l~-~~~~~~~~~lp~~dG~~~~~~~ 236 (237)
T 3c3y_A 209 LNKLLA-ADPRIEIVHLPLGDGITFCRRL 236 (237)
T ss_dssp HHHHHH-HCTTEEEEEECSTTCEEEEEEC
T ss_pred HHHHHh-cCCCeEEEEEEeCCceEEEEEc
Confidence 122 3467999999999999999986
No 4
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.97 E-value=1e-30 Score=225.65 Aligned_cols=159 Identities=17% Similarity=0.197 Sum_probs=135.4
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEe
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIV 101 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~ 101 (223)
+++|++++||..|++..++++|||||||+|| ++++||.+. +++++|++||+++++++.|+++++++ |+. |+++.
T Consensus 62 ~~~~~~~~ll~~l~~~~~~~~VLeiG~G~G~--~~~~la~~~-~~~~~v~~iD~s~~~~~~a~~~~~~~-g~~~~i~~~~ 137 (247)
T 1sui_A 62 TTSADEGQFLSMLLKLINAKNTMEIGVYTGY--SLLATALAI-PEDGKILAMDINKENYELGLPVIKKA-GVDHKIDFRE 137 (247)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEECCGGGH--HHHHHHHHS-CTTCEEEEEESCCHHHHHHHHHHHHT-TCGGGEEEEE
T ss_pred CcCHHHHHHHHHHHHhhCcCEEEEeCCCcCH--HHHHHHHhC-CCCCEEEEEECCHHHHHHHHHHHHHc-CCCCCeEEEE
Confidence 6799999999999999999999999999999 888998764 44799999999999999999999999 985 99999
Q ss_pred cchHHHhcCC-------CCccEEEEeCCCcccHHHHHHh-ccCCCceEEEEeCCCCCCc--cc---ccc---c-------
Q 027409 102 RQAEEVMGEL-------KGVDFLVVDCTSKDFARVLRFA-RFSNKGAVLAFKNAFQRST--SG---LRW---Q------- 158 (223)
Q Consensus 102 GdA~evL~~L-------~~fDfVFIDa~K~~Y~~~f~~~-~~l~~GgvIV~DNvl~~g~--~~---~~~---~------- 158 (223)
|||.+.++.+ +.||+||+|+++.+|..+|+.+ +.|+|||+|++||+++.|. .. ... +
T Consensus 138 gda~~~l~~l~~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~i~ 217 (247)
T 1sui_A 138 GPALPVLDEMIKDEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVL 217 (247)
T ss_dssp SCHHHHHHHHHHSGGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEECTTGGGGGGCCTTSCCCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhccCCCCCEEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEecCCcCCcccCCCccchhhhhhHHHHHHH
Confidence 9999988764 4799999999999999999865 6779999999999998774 11 000 0
Q ss_pred c-ccccccCCCceEEEEeecCCceEEEEEc
Q 027409 159 G-QGVLDRGTRVVRSVFLPVGQGLDIVHVG 187 (223)
Q Consensus 159 ~-r~~v~~~~~~~~t~lLPiGDGl~vs~k~ 187 (223)
. ...+. .++++.++++|+|||+++++|+
T Consensus 218 ~~~~~l~-~~~~~~~~~lp~~dG~~l~~k~ 246 (247)
T 1sui_A 218 ELNKALA-VDPRIEICMLPVGDGITICRRI 246 (247)
T ss_dssp HHHHHHH-TCTTBCCEEECSTTCEEEECBC
T ss_pred HHHHHHh-hCCCeEEEEEecCCccEEEEEc
Confidence 0 00122 4567999999999999999875
No 5
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.97 E-value=1.5e-29 Score=215.05 Aligned_cols=157 Identities=15% Similarity=0.232 Sum_probs=134.6
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEe
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIV 101 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~ 101 (223)
++.|++++||..+++..++++|||||||+|| +++++|.+. +++++++++|+++++++.|+++++++ |+. |+++.
T Consensus 55 ~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~--~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~-g~~~~i~~~~ 130 (232)
T 3cbg_A 55 QISPEQAQFLGLLISLTGAKQVLEIGVFRGY--SALAMALQL-PPDGQIIACDQDPNATAIAKKYWQKA-GVAEKISLRL 130 (232)
T ss_dssp SCCHHHHHHHHHHHHHHTCCEEEEECCTTSH--HHHHHHTTS-CTTCEEEEEESCHHHHHHHHHHHHHH-TCGGGEEEEE
T ss_pred CcCHHHHHHHHHHHHhcCCCEEEEecCCCCH--HHHHHHHhC-CCCCEEEEEECCHHHHHHHHHHHHHc-CCCCcEEEEE
Confidence 6799999999999999999999999999999 888998653 44789999999999999999999999 986 99999
Q ss_pred cchHHHhcCC------CCccEEEEeCCCcccHHHHHHh-ccCCCceEEEEeCCCCCCc--cc-c---------ccccccc
Q 027409 102 RQAEEVMGEL------KGVDFLVVDCTSKDFARVLRFA-RFSNKGAVLAFKNAFQRST--SG-L---------RWQGQGV 162 (223)
Q Consensus 102 GdA~evL~~L------~~fDfVFIDa~K~~Y~~~f~~~-~~l~~GgvIV~DNvl~~g~--~~-~---------~~~~r~~ 162 (223)
||+.+.++.+ +.||+||+|+++.+|..+|+.+ +.++|||+|++||+++.|. .. . .++. .
T Consensus 131 ~d~~~~l~~l~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~ 208 (232)
T 3cbg_A 131 GPALATLEQLTQGKPLPEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVIDNVLWHGKVTEVDPQEAQTQVLQQFNR--D 208 (232)
T ss_dssp SCHHHHHHHHHTSSSCCCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEECTTGGGGGGCSSCCSHHHHHHHHHHH--H
T ss_pred cCHHHHHHHHHhcCCCCCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEeCCCcCCccCCcccCChHHHHHHHHHH--H
Confidence 9999887765 5799999999999999999866 6779999999999998764 11 0 1111 2
Q ss_pred cccCCCceEEEEeecCCceEEEEEc
Q 027409 163 LDRGTRVVRSVFLPVGQGLDIVHVG 187 (223)
Q Consensus 163 v~~~~~~~~t~lLPiGDGl~vs~k~ 187 (223)
+. .++++.++++|+|||+++++|+
T Consensus 209 l~-~~~~~~~~~lp~~dG~~~~~~~ 232 (232)
T 3cbg_A 209 LA-QDERVRISVIPLGDGMTLALKK 232 (232)
T ss_dssp HT-TCTTEEEEEECSBTCEEEEEEC
T ss_pred Hh-hCCCeEEEEEEcCCeEEEEEeC
Confidence 33 4567999999999999999874
No 6
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.96 E-value=1.3e-28 Score=209.04 Aligned_cols=158 Identities=18% Similarity=0.143 Sum_probs=134.6
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEe
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIV 101 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~ 101 (223)
++.|+++++|..++...++++|||||||+|| ++++||.+ .++++|+++|+++++++.|+++++++ |+. |+++.
T Consensus 54 ~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~--~~~~la~~--~~~~~v~~vD~~~~~~~~a~~~~~~~-~~~~~v~~~~ 128 (232)
T 3ntv_A 54 IVDRLTLDLIKQLIRMNNVKNILEIGTAIGY--SSMQFASI--SDDIHVTTIERNETMIQYAKQNLATY-HFENQVRIIE 128 (232)
T ss_dssp CCCHHHHHHHHHHHHHHTCCEEEEECCSSSH--HHHHHHTT--CTTCEEEEEECCHHHHHHHHHHHHHT-TCTTTEEEEE
T ss_pred CcCHHHHHHHHHHHhhcCCCEEEEEeCchhH--HHHHHHHh--CCCCEEEEEECCHHHHHHHHHHHHHc-CCCCcEEEEE
Confidence 6899999999999999999999999999999 88888753 24789999999999999999999999 985 99999
Q ss_pred cchHHHhc-CC-CCccEEEEeCCCcccHHHHHHh-ccCCCceEEEEeCCCCCCc---ccc-c----------ccc-cccc
Q 027409 102 RQAEEVMG-EL-KGVDFLVVDCTSKDFARVLRFA-RFSNKGAVLAFKNAFQRST---SGL-R----------WQG-QGVL 163 (223)
Q Consensus 102 GdA~evL~-~L-~~fDfVFIDa~K~~Y~~~f~~~-~~l~~GgvIV~DNvl~~g~---~~~-~----------~~~-r~~v 163 (223)
||+.+.++ .+ ++||+||+|+++.+|..+|+.+ +.|+|||++++||+++.|. +.. . .+. ...+
T Consensus 129 ~d~~~~~~~~~~~~fD~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~l 208 (232)
T 3ntv_A 129 GNALEQFENVNDKVYDMIFIDAAKAQSKKFFEIYTPLLKHQGLVITDNVLYHGFVSDIGIVRSRNVRQMVKKVQDYNEWL 208 (232)
T ss_dssp SCGGGCHHHHTTSCEEEEEEETTSSSHHHHHHHHGGGEEEEEEEEEECTTGGGGGGCGGGGGCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHhhccCCccEEEEcCcHHHHHHHHHHHHHhcCCCeEEEEeeCCcCccccCcccccchhhhHHHHHHHHHHHHH
Confidence 99999888 66 5899999999999999999866 5679999999999999774 111 0 000 0023
Q ss_pred ccCCCceEEEEeecCCceEEEEEc
Q 027409 164 DRGTRVVRSVFLPVGQGLDIVHVG 187 (223)
Q Consensus 164 ~~~~~~~~t~lLPiGDGl~vs~k~ 187 (223)
. .+++++++++|+|||+++++|+
T Consensus 209 ~-~~~~~~~~~lp~~dG~~i~~k~ 231 (232)
T 3ntv_A 209 I-KQPGYTTNFLNIDDGLAISIKG 231 (232)
T ss_dssp H-TCTTEEEEEECSTTCEEEEEEC
T ss_pred h-cCCCeEEEEEEcCCceEEEEEC
Confidence 3 4567999999999999999985
No 7
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.96 E-value=3.2e-28 Score=203.40 Aligned_cols=157 Identities=20% Similarity=0.192 Sum_probs=133.9
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEe
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIV 101 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~ 101 (223)
+++|++++||..+++..++++|||||||+|+ +++++|.+. +++++++++|+++++++.|+++++++ |+. |+++.
T Consensus 52 ~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~--~~~~la~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~-g~~~~i~~~~ 127 (229)
T 2avd_A 52 MMTCEQAQLLANLARLIQAKKALDLGTFTGY--SALALALAL-PADGRVVTCEVDAQPPELGRPLWRQA-EAEHKIDLRL 127 (229)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEECCTTSH--HHHHHHTTS-CTTCEEEEEESCSHHHHHHHHHHHHT-TCTTTEEEEE
T ss_pred ccCHHHHHHHHHHHHhcCCCEEEEEcCCccH--HHHHHHHhC-CCCCEEEEEECCHHHHHHHHHHHHHC-CCCCeEEEEE
Confidence 7899999999999999999999999999999 888888543 34789999999999999999999999 985 99999
Q ss_pred cchHHHhcCC------CCccEEEEeCCCcccHHHHHHh-ccCCCceEEEEeCCCCCCc--ccc----------ccccccc
Q 027409 102 RQAEEVMGEL------KGVDFLVVDCTSKDFARVLRFA-RFSNKGAVLAFKNAFQRST--SGL----------RWQGQGV 162 (223)
Q Consensus 102 GdA~evL~~L------~~fDfVFIDa~K~~Y~~~f~~~-~~l~~GgvIV~DNvl~~g~--~~~----------~~~~r~~ 162 (223)
||+.+.++.+ +.||+||+|+.+.+|..+++.+ +.++|||+|++||+++.+. ... .++. .
T Consensus 128 ~d~~~~~~~~~~~~~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~ 205 (229)
T 2avd_A 128 KPALETLDELLAAGEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLRVLWRGKVLQPPKGDVAAECVRNLNE--R 205 (229)
T ss_dssp SCHHHHHHHHHHTTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEECCSGGGGGGSCCTTCHHHHHHHHHHH--H
T ss_pred cCHHHHHHHHHhcCCCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEECCCcCCcccCcccCChHHHHHHHHHH--H
Confidence 9999987765 5799999999999999999866 6679999999999998763 110 1111 2
Q ss_pred cccCCCceEEEEeecCCceEEEEEc
Q 027409 163 LDRGTRVVRSVFLPVGQGLDIVHVG 187 (223)
Q Consensus 163 v~~~~~~~~t~lLPiGDGl~vs~k~ 187 (223)
+. .+++++++++|+|||+++++|.
T Consensus 206 l~-~~~~~~~~~lp~~dGl~~~~k~ 229 (229)
T 2avd_A 206 IR-RDVRVYISLLPLGDGLTLAFKI 229 (229)
T ss_dssp HH-HCTTEEEEEECSTTCEEEEEEC
T ss_pred Hh-hCCCEEEEEEecCCceEEEEEC
Confidence 33 3466999999999999999874
No 8
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.96 E-value=1.6e-27 Score=199.93 Aligned_cols=156 Identities=13% Similarity=0.180 Sum_probs=134.4
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEe
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIV 101 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~ 101 (223)
.++|+++++|..++...++++|||||||+|+ ++++||.+. +++++|++||+++++++.|+++++++ |+. |+++.
T Consensus 41 ~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~--~~~~la~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~-~~~~~v~~~~ 116 (221)
T 3u81_A 41 NVGDAKGQIMDAVIREYSPSLVLELGAYCGY--SAVRMARLL-QPGARLLTMEINPDCAAITQQMLNFA-GLQDKVTILN 116 (221)
T ss_dssp GCCHHHHHHHHHHHHHHCCSEEEEECCTTSH--HHHHHHTTS-CTTCEEEEEESCHHHHHHHHHHHHHH-TCGGGEEEEE
T ss_pred ccCHHHHHHHHHHHHhcCCCEEEEECCCCCH--HHHHHHHhC-CCCCEEEEEeCChHHHHHHHHHHHHc-CCCCceEEEE
Confidence 7899999999999999999999999999999 888998653 45789999999999999999999999 987 99999
Q ss_pred cchHHHhcCCC------CccEEEEeCCCcccHHHHHH---hccCCCceEEEEeCCCCCCccccccccccccccCCCceEE
Q 027409 102 RQAEEVMGELK------GVDFLVVDCTSKDFARVLRF---ARFSNKGAVLAFKNAFQRSTSGLRWQGQGVLDRGTRVVRS 172 (223)
Q Consensus 102 GdA~evL~~L~------~fDfVFIDa~K~~Y~~~f~~---~~~l~~GgvIV~DNvl~~g~~~~~~~~r~~v~~~~~~~~t 172 (223)
||+.+.++.+. +||+||+|+.+.+|..+++. ++.|+|||+||+||+.+++... +.. .+++ ++.+.+
T Consensus 117 ~d~~~~l~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~~LkpgG~lv~~~~~~~~~~~--~~~--~l~~-~~~~~~ 191 (221)
T 3u81_A 117 GASQDLIPQLKKKYDVDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKGTVLLADNVIVPGTPD--FLA--YVRG-SSSFEC 191 (221)
T ss_dssp SCHHHHGGGTTTTSCCCCCSEEEECSCGGGHHHHHHHHHHTTCCCTTCEEEESCCCCCCCHH--HHH--HHHH-CTTEEE
T ss_pred CCHHHHHHHHHHhcCCCceEEEEEcCCcccchHHHHHHHhccccCCCeEEEEeCCCCcchHH--HHH--HHhh-CCCceE
Confidence 99999988763 79999999999999976554 3677999999999999877522 222 3333 356999
Q ss_pred EEee-------cCCceEEEEEcc
Q 027409 173 VFLP-------VGQGLDIVHVGS 188 (223)
Q Consensus 173 ~lLP-------iGDGl~vs~k~~ 188 (223)
+++| ++||+++++++.
T Consensus 192 ~~~~~~~~~~~~~dG~~~~~~~g 214 (221)
T 3u81_A 192 THYSSYLEYMKVVDGLEKAIYQG 214 (221)
T ss_dssp EEEEEEETTTTEEEEEEEEEECC
T ss_pred EEcccccccCCCCCceEEEEEeC
Confidence 9999 899999999974
No 9
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.96 E-value=1.2e-27 Score=205.42 Aligned_cols=177 Identities=17% Similarity=0.199 Sum_probs=143.1
Q ss_pred HHHHHHHhhcccCC------------------CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcE
Q 027409 10 ASKAYIDTVKSCEN------------------IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCAR 71 (223)
Q Consensus 10 a~~ayl~~l~~~~~------------------ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~ 71 (223)
...+|+.++..... .++|.++++|..++...++++|||||||+|+ ++++||.+. +++++
T Consensus 14 ~~~~y~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~--~~~~la~~~-~~~~~ 90 (248)
T 3tfw_A 14 AVDNYLIKALIPGDPVLDRVLENNHRAGLPAHDVAANQGQFLALLVRLTQAKRILEIGTLGGY--STIWMAREL-PADGQ 90 (248)
T ss_dssp HHHHHHHHHHSCCCHHHHHHHHHHHHTTCBSCCCCHHHHHHHHHHHHHHTCSEEEEECCTTSH--HHHHHHTTS-CTTCE
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHcCCCccccCHHHHHHHHHHHhhcCCCEEEEecCCchH--HHHHHHHhC-CCCCE
Confidence 35577776655432 3579999999999999999999999999999 888888543 44789
Q ss_pred EEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCCC---CccEEEEeCCCcccHHHHHHh-ccCCCceEEEEe
Q 027409 72 HVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGELK---GVDFLVVDCTSKDFARVLRFA-RFSNKGAVLAFK 145 (223)
Q Consensus 72 i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L~---~fDfVFIDa~K~~Y~~~f~~~-~~l~~GgvIV~D 145 (223)
|+++|+++++++.|+++++++ |+. |+++.||+.+.++.+. .||+||+|+++.+|+.+|+.+ +.|+|||+||+|
T Consensus 91 v~~vD~s~~~~~~a~~~~~~~-g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~ 169 (248)
T 3tfw_A 91 LLTLEADAHHAQVARENLQLA-GVDQRVTLREGPALQSLESLGECPAFDLIFIDADKPNNPHYLRWALRYSRPGTLIIGD 169 (248)
T ss_dssp EEEEECCHHHHHHHHHHHHHT-TCTTTEEEEESCHHHHHHTCCSCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEE
T ss_pred EEEEECCHHHHHHHHHHHHHc-CCCCcEEEEEcCHHHHHHhcCCCCCeEEEEECCchHHHHHHHHHHHHhcCCCeEEEEe
Confidence 999999999999999999999 987 9999999999998762 799999999999999999865 677999999999
Q ss_pred CCCCCCc--c-cc---------ccccccccccCCCceEEEEe-ecC----CceEEEEEcccCCCC
Q 027409 146 NAFQRST--S-GL---------RWQGQGVLDRGTRVVRSVFL-PVG----QGLDIVHVGSTSGSG 193 (223)
Q Consensus 146 Nvl~~g~--~-~~---------~~~~r~~v~~~~~~~~t~lL-PiG----DGl~vs~k~~~~~~~ 193 (223)
|+++.|. . .. .+.. .+. .+++++++++ |+| ||+.+++++...-.+
T Consensus 170 ~~~~~g~v~~~~~~~~~~~~~~~~~~--~l~-~~~~~~~~~l~~~g~~~~DG~~i~~~~~~~~~~ 231 (248)
T 3tfw_A 170 NVVRDGEVVNPQSADERVQGVRQFIE--MMG-AEPRLTATALQTVGTKGWDGFTLAWVNAAENLY 231 (248)
T ss_dssp CCSGGGGGGCTTCCCHHHHHHHHHHH--HHH-HCTTEEEEEEEECSTTCSEEEEEEEECCC----
T ss_pred CCCcCCcccCccccchHHHHHHHHHH--HHh-hCCCEEEEEeecCCCCCCCeeEEEEEeCCcchH
Confidence 9998764 1 10 0111 233 3466999988 777 999999998654444
No 10
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.95 E-value=1.1e-27 Score=199.64 Aligned_cols=157 Identities=18% Similarity=0.202 Sum_probs=133.7
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEe
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIV 101 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~ 101 (223)
.++|.++++|..++...++++|||||||+|+ +++++|.+. +++++++++|+++++++.|+++++++ |+. |+++.
T Consensus 41 ~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~--~~~~la~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~-~~~~~v~~~~ 116 (223)
T 3duw_A 41 DVSPTQGKFLQLLVQIQGARNILEIGTLGGY--STIWLARGL-SSGGRVVTLEASEKHADIARSNIERA-NLNDRVEVRT 116 (223)
T ss_dssp SCCHHHHHHHHHHHHHHTCSEEEEECCTTSH--HHHHHHTTC-CSSCEEEEEESCHHHHHHHHHHHHHT-TCTTTEEEEE
T ss_pred ccCHHHHHHHHHHHHhhCCCEEEEecCCccH--HHHHHHHhC-CCCCEEEEEECCHHHHHHHHHHHHHc-CCCCcEEEEE
Confidence 3579999999999999999999999999999 888888643 44789999999999999999999999 986 99999
Q ss_pred cchHHHhcCC-----CCccEEEEeCCCcccHHHHHHh-ccCCCceEEEEeCCCCCCc--c-cc---------cccccccc
Q 027409 102 RQAEEVMGEL-----KGVDFLVVDCTSKDFARVLRFA-RFSNKGAVLAFKNAFQRST--S-GL---------RWQGQGVL 163 (223)
Q Consensus 102 GdA~evL~~L-----~~fDfVFIDa~K~~Y~~~f~~~-~~l~~GgvIV~DNvl~~g~--~-~~---------~~~~r~~v 163 (223)
||+.+.++.+ ++||+||+|+.+..|..+|+.+ +.|+|||+|++||+++.|. . .. .+.. .+
T Consensus 117 ~d~~~~~~~~~~~~~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~l 194 (223)
T 3duw_A 117 GLALDSLQQIENEKYEPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGDNVVREGEVIDNTSNDPRVQGIRRFYE--LI 194 (223)
T ss_dssp SCHHHHHHHHHHTTCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEESCSGGGGGGCTTCCCHHHHHHHHHHH--HH
T ss_pred cCHHHHHHHHHhcCCCCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccchHHHHHHHHHH--HH
Confidence 9999987764 4699999999999999999865 6779999999999998763 1 10 1111 23
Q ss_pred ccCCCceEEEEeec-----CCceEEEEEc
Q 027409 164 DRGTRVVRSVFLPV-----GQGLDIVHVG 187 (223)
Q Consensus 164 ~~~~~~~~t~lLPi-----GDGl~vs~k~ 187 (223)
+ .++.+.++++|+ |||+.+++++
T Consensus 195 ~-~~~~~~~~~~p~~~~~~~dG~~~~~~~ 222 (223)
T 3duw_A 195 A-AEPRVSATALQTVGSKGYDGFIMAVVK 222 (223)
T ss_dssp H-HCTTEEEEEEEEEETTEEEEEEEEEEC
T ss_pred h-hCCCeEEEEEeccCCCCCCeeEEEEEe
Confidence 3 346699999999 9999999986
No 11
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.95 E-value=1.3e-27 Score=199.24 Aligned_cols=157 Identities=17% Similarity=0.252 Sum_probs=134.6
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEe
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIV 101 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~ 101 (223)
.++|+++++|..++...++++|||||||+|+ ++++||.+ .+++++|+++|+++++++.|+++++++ |+. |+++.
T Consensus 47 ~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~--~~~~la~~-~~~~~~v~~vD~~~~~~~~a~~~~~~~-~~~~~v~~~~ 122 (225)
T 3tr6_A 47 QTAPEQAQLLALLVKLMQAKKVIDIGTFTGY--SAIAMGLA-LPKDGTLITCDVDEKSTALAKEYWEKA-GLSDKIGLRL 122 (225)
T ss_dssp SCCHHHHHHHHHHHHHHTCSEEEEECCTTSH--HHHHHHTT-CCTTCEEEEEESCHHHHHHHHHHHHHT-TCTTTEEEEE
T ss_pred ccCHHHHHHHHHHHHhhCCCEEEEeCCcchH--HHHHHHHh-CCCCCEEEEEeCCHHHHHHHHHHHHHC-CCCCceEEEe
Confidence 6889999999999999999999999999999 88888754 344789999999999999999999999 987 99999
Q ss_pred cchHHHhcCC------CCccEEEEeCCCcccHHHHHHh-ccCCCceEEEEeCCCCCCc-cccc-----------cccccc
Q 027409 102 RQAEEVMGEL------KGVDFLVVDCTSKDFARVLRFA-RFSNKGAVLAFKNAFQRST-SGLR-----------WQGQGV 162 (223)
Q Consensus 102 GdA~evL~~L------~~fDfVFIDa~K~~Y~~~f~~~-~~l~~GgvIV~DNvl~~g~-~~~~-----------~~~r~~ 162 (223)
||+.+.++.+ +.||+||+|+.+.+|..+|+.+ +.|+|||++++||+++.|. .... +.. .
T Consensus 123 ~d~~~~~~~~~~~~~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~ 200 (225)
T 3tr6_A 123 SPAKDTLAELIHAGQAWQYDLIYIDADKANTDLYYEESLKLLREGGLIAVDNVLRRGQVADEENQSENNQLIRLFNQ--K 200 (225)
T ss_dssp SCHHHHHHHHHTTTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHH--H
T ss_pred CCHHHHHHHhhhccCCCCccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccChHHHHHHHHHH--H
Confidence 9999988754 5799999999999999999866 6779999999999998774 1100 111 2
Q ss_pred cccCCCceEEEEeecCCceEEEEEc
Q 027409 163 LDRGTRVVRSVFLPVGQGLDIVHVG 187 (223)
Q Consensus 163 v~~~~~~~~t~lLPiGDGl~vs~k~ 187 (223)
+. .+++++++++|+|||+++++|+
T Consensus 201 l~-~~~~~~~~~lp~~dG~~~~~k~ 224 (225)
T 3tr6_A 201 VY-KDERVDMILIPIGDGLTLARKK 224 (225)
T ss_dssp HH-HCTTEEEEEECSTTCEEEEEEC
T ss_pred Hh-cCCCeEEEEEEcCCccEEEEEC
Confidence 33 3467999999999999999986
No 12
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.95 E-value=2.5e-26 Score=190.57 Aligned_cols=157 Identities=25% Similarity=0.263 Sum_probs=133.2
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEe
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIV 101 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~ 101 (223)
+++|+++++|..+++..++++|||||||+|+ ++++||.+. +++++|+++|+++++++.|+++++++ |+. |+++.
T Consensus 39 ~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~--~~~~la~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~-~~~~~v~~~~ 114 (210)
T 3c3p_A 39 IVDRQTGRLLYLLARIKQPQLVVVPGDGLGC--ASWWFARAI-SISSRVVMIDPDRDNVEHARRMLHDN-GLIDRVELQV 114 (210)
T ss_dssp CCCHHHHHHHHHHHHHHCCSEEEEESCGGGH--HHHHHHTTS-CTTCEEEEEESCHHHHHHHHHHHHHH-SGGGGEEEEE
T ss_pred CcCHHHHHHHHHHHHhhCCCEEEEEcCCccH--HHHHHHHhC-CCCCEEEEEECCHHHHHHHHHHHHHC-CCCceEEEEE
Confidence 7899999999999999999999999999999 888888653 34789999999999999999999999 986 99999
Q ss_pred cchHHHhcCCCCccEEEEeCCCcccHHHHHHh-ccCCCceEEEEeCCCCCCc-c-c--------c-ccccccccccCCCc
Q 027409 102 RQAEEVMGELKGVDFLVVDCTSKDFARVLRFA-RFSNKGAVLAFKNAFQRST-S-G--------L-RWQGQGVLDRGTRV 169 (223)
Q Consensus 102 GdA~evL~~L~~fDfVFIDa~K~~Y~~~f~~~-~~l~~GgvIV~DNvl~~g~-~-~--------~-~~~~r~~v~~~~~~ 169 (223)
||+.+.++.+..||+||+|+.+.+|..+++.+ +.|+|||++++||+++.|. . . . .+.. .+. .+++
T Consensus 115 ~d~~~~~~~~~~fD~v~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~--~l~-~~~~ 191 (210)
T 3c3p_A 115 GDPLGIAAGQRDIDILFMDCDVFNGADVLERMNRCLAKNALLIAVNALRRGSVAESHEDPETAALREFNH--HLS-RRRD 191 (210)
T ss_dssp SCHHHHHTTCCSEEEEEEETTTSCHHHHHHHHGGGEEEEEEEEEESSSSCC------------CCCHHHH--HHT-TCTT
T ss_pred ecHHHHhccCCCCCEEEEcCChhhhHHHHHHHHHhcCCCeEEEEECccccCcccCcccchHHHHHHHHHH--HHh-hCCC
Confidence 99999988763399999999999999999866 5679999999999988763 1 0 0 0111 222 4567
Q ss_pred eEEEEeecCCceEEEEEc
Q 027409 170 VRSVFLPVGQGLDIVHVG 187 (223)
Q Consensus 170 ~~t~lLPiGDGl~vs~k~ 187 (223)
+.++++|++||+.+++|+
T Consensus 192 ~~~~~~p~~~G~~~~~~~ 209 (210)
T 3c3p_A 192 FFTTIVPVGNGVLLGYRL 209 (210)
T ss_dssp EEEEEECSTTCEEEEEEC
T ss_pred eEEEEEecCCceEEEEeC
Confidence 999999999999999986
No 13
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.94 E-value=4.1e-27 Score=200.93 Aligned_cols=116 Identities=16% Similarity=0.017 Sum_probs=99.4
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCc--e--EEE
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGW--V--SEV 99 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~--~--I~l 99 (223)
+++|++++||.. ++.+|++|||||| || ||+|||. .. +|+|+|||.|+++++.|++||+++ |+ . |++
T Consensus 15 ~v~~~~~~~L~~--~l~~a~~VLEiGt--Gy--STl~lA~--~~-~g~VvtvE~d~~~~~~ar~~l~~~-g~~~~~~I~~ 84 (202)
T 3cvo_A 15 TMPPAEAEALRM--AYEEAEVILEYGS--GG--STVVAAE--LP-GKHVTSVESDRAWARMMKAWLAAN-PPAEGTEVNI 84 (202)
T ss_dssp CSCHHHHHHHHH--HHHHCSEEEEESC--SH--HHHHHHT--ST-TCEEEEEESCHHHHHHHHHHHHHS-CCCTTCEEEE
T ss_pred cCCHHHHHHHHH--HhhCCCEEEEECc--hH--HHHHHHH--cC-CCEEEEEeCCHHHHHHHHHHHHHc-CCCCCCceEE
Confidence 799999999999 6679999999998 68 9999986 23 799999999999999999999999 97 4 999
Q ss_pred EecchHHH--------------hc-------CC---CCccEEEEeCCCcccHHHHHH-hccCCCceEEEEeCCCCCC
Q 027409 100 IVRQAEEV--------------MG-------EL---KGVDFLVVDCTSKDFARVLRF-ARFSNKGAVLAFKNAFQRS 151 (223)
Q Consensus 100 i~GdA~ev--------------L~-------~L---~~fDfVFIDa~K~~Y~~~f~~-~~~l~~GgvIV~DNvl~~g 151 (223)
+.|||.+. ++ ++ ++||||||||+|.+ .|++. ++.+++||+||+||+++++
T Consensus 85 ~~gda~~~~~wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k~~--~~~~~~l~~l~~GG~Iv~DNv~~r~ 159 (202)
T 3cvo_A 85 VWTDIGPTGDWGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRFRV--GCALATAFSITRPVTLLFDDYSQRR 159 (202)
T ss_dssp EECCCSSBCGGGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSSHH--HHHHHHHHHCSSCEEEEETTGGGCS
T ss_pred EEeCchhhhcccccccchhhhhHHHHhhhhhccccCCCCCEEEEeCCCch--hHHHHHHHhcCCCeEEEEeCCcCCc
Confidence 99998765 22 12 47999999999885 66764 4677999999999987655
No 14
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.94 E-value=1.2e-25 Score=190.51 Aligned_cols=158 Identities=16% Similarity=0.216 Sum_probs=134.2
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEe
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIV 101 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~ 101 (223)
++.|.++++|..++...++++|||||||+|+ +++++|... +++++++++|++++.++.|++++++. |+. |+++.
T Consensus 43 ~~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~--~~~~la~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~-g~~~~v~~~~ 118 (239)
T 2hnk_A 43 QISPEEGQFLNILTKISGAKRIIEIGTFTGY--SSLCFASAL-PEDGKILCCDVSEEWTNVARKYWKEN-GLENKIFLKL 118 (239)
T ss_dssp SCCHHHHHHHHHHHHHHTCSEEEEECCTTCH--HHHHHHHHS-CTTCEEEEEESCHHHHHHHHHHHHHT-TCGGGEEEEE
T ss_pred ccCHHHHHHHHHHHHhhCcCEEEEEeCCCCH--HHHHHHHhC-CCCCEEEEEECCHHHHHHHHHHHHHc-CCCCCEEEEE
Confidence 6899999999999999999999999999999 788887653 34689999999999999999999998 986 99999
Q ss_pred cchHHHhcCC-----------------CCccEEEEeCCCcccHHHHHHh-ccCCCceEEEEeCCCCCCc---ccc-----
Q 027409 102 RQAEEVMGEL-----------------KGVDFLVVDCTSKDFARVLRFA-RFSNKGAVLAFKNAFQRST---SGL----- 155 (223)
Q Consensus 102 GdA~evL~~L-----------------~~fDfVFIDa~K~~Y~~~f~~~-~~l~~GgvIV~DNvl~~g~---~~~----- 155 (223)
||+.+.++.+ ++||+||+|+.+.+|..+|+.+ +.++|||++++||+++.|. +..
T Consensus 119 ~d~~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~ 198 (239)
T 2hnk_A 119 GSALETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADNVLWDGSVADLSHQEPST 198 (239)
T ss_dssp SCHHHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCHHH
T ss_pred CCHHHHHHHHHhhcccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEccccCCcccCccccchHH
Confidence 9999877644 5799999999999999999866 6679999999999988763 100
Q ss_pred ----ccccccccccCCCceEEEEeecCCceEEEEEcc
Q 027409 156 ----RWQGQGVLDRGTRVVRSVFLPVGQGLDIVHVGS 188 (223)
Q Consensus 156 ----~~~~r~~v~~~~~~~~t~lLPiGDGl~vs~k~~ 188 (223)
.+.. .+. .++.+.++++|+|||+++++|++
T Consensus 199 ~~~~~~~~--~~~-~~~~~~~~~~p~~~g~~~~~~~~ 232 (239)
T 2hnk_A 199 VGIRKFNE--LVY-NDSLVDVSLVPIADGVSLVRKRL 232 (239)
T ss_dssp HHHHHHHH--HHH-HCTTEEEEEECSTTCEEEEEECC
T ss_pred HHHHHHHH--HHh-hCCCeEEEEEEcCCceEeeeehh
Confidence 0111 222 34679999999999999999985
No 15
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.92 E-value=3e-24 Score=180.67 Aligned_cols=159 Identities=22% Similarity=0.178 Sum_probs=130.3
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEe
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIV 101 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~ 101 (223)
+++|+++++|..++...++++|||||||+|+ +++++|... ++++|+++|+++++++.|++++++. |+. |+++.
T Consensus 37 ~~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~--~~~~la~~~--~~~~v~~vD~~~~~~~~a~~~~~~~-~~~~~v~~~~ 111 (233)
T 2gpy_A 37 IMDLLGMESLLHLLKMAAPARILEIGTAIGY--SAIRMAQAL--PEATIVSIERDERRYEEAHKHVKAL-GLESRIELLF 111 (233)
T ss_dssp CCCHHHHHHHHHHHHHHCCSEEEEECCTTSH--HHHHHHHHC--TTCEEEEECCCHHHHHHHHHHHHHT-TCTTTEEEEC
T ss_pred CcCHHHHHHHHHHHhccCCCEEEEecCCCcH--HHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHc-CCCCcEEEEE
Confidence 7899999999999999999999999999999 788888653 3689999999999999999999999 985 99999
Q ss_pred cchHHHhcCC---CCccEEEEeCCCcccHHHHHHh-ccCCCceEEEEeCCCCCCc--ccc----c-------ccc-cccc
Q 027409 102 RQAEEVMGEL---KGVDFLVVDCTSKDFARVLRFA-RFSNKGAVLAFKNAFQRST--SGL----R-------WQG-QGVL 163 (223)
Q Consensus 102 GdA~evL~~L---~~fDfVFIDa~K~~Y~~~f~~~-~~l~~GgvIV~DNvl~~g~--~~~----~-------~~~-r~~v 163 (223)
||+.+.++.+ ++||+||+|+.+.+|..+++.+ +.++|||+++++|+++.+. ... . .+. ...+
T Consensus 112 ~d~~~~~~~~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l 191 (233)
T 2gpy_A 112 GDALQLGEKLELYPLFDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSDNVLFRGLVAETDIEHKRHKQLATKIDTYNQWL 191 (233)
T ss_dssp SCGGGSHHHHTTSCCEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEETTTC-------------------------CTT
T ss_pred CCHHHHHHhcccCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEcCCcCCccCCccccccchhHHHHHHHHHHHHH
Confidence 9999877654 4799999999999999999866 5679999999999988763 110 0 000 0123
Q ss_pred ccCCCceEEEEeecCCceEEEEEcc
Q 027409 164 DRGTRVVRSVFLPVGQGLDIVHVGS 188 (223)
Q Consensus 164 ~~~~~~~~t~lLPiGDGl~vs~k~~ 188 (223)
. .++.+.++++|++||+.+++++.
T Consensus 192 ~-~~~~~~~~~~p~~dG~~~~~~~~ 215 (233)
T 2gpy_A 192 L-EHPQYDTRIFPVGDGIAISIKRE 215 (233)
T ss_dssp T-TCTTEEEEEECSTTCEEEEEEC-
T ss_pred H-hCCCeEEEEEEcCCeEEEEEEcC
Confidence 2 34679999999999999999873
No 16
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=99.88 E-value=9.4e-23 Score=181.64 Aligned_cols=155 Identities=7% Similarity=-0.083 Sum_probs=119.3
Q ss_pred CCcHHHHHHHHHHHHhc----CCCeEEEEccCcchHHHHHHHHHhcCC---CCcEEEEEeCCc-----------------
Q 027409 24 IKESGVAELLSAMAAGW----NAKLIVEAWTHGGPITTSIGLAIAARH---TCARHVCIVPDE----------------- 79 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~----~ak~ILEIGT~~Gys~Stl~la~A~~~---~~g~i~TIE~d~----------------- 79 (223)
.+.++.+.+|+.|++.. .|++||||||+.|| |+++||.+..+ ++++|+++|..+
T Consensus 85 mv~~~r~~~L~~l~~~v~~~~~pg~IlEiGv~~G~--Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~ 162 (282)
T 2wk1_A 85 MIGIKRLENIRQCVEDVIGNNVPGDLVETGVWRGG--ACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMA 162 (282)
T ss_dssp SSHHHHHHHHHHHHHHHHHTTCCCEEEEECCTTSH--HHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHC
T ss_pred ccCHHHHHHHHHHHHHHHhcCCCCcEEEeecCchH--HHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccc
Confidence 57788999999999874 49999999999999 88888876532 478999999642
Q ss_pred ---------hHHHHHHHHHHhhcCc--e-EEEEecchHHHhcCC--CCccEEEEeCCC-cccHHHHHHhcc-CCCceEEE
Q 027409 80 ---------RSRLAYVKAMYDVVGW--V-SEVIVRQAEEVMGEL--KGVDFLVVDCTS-KDFARVLRFARF-SNKGAVLA 143 (223)
Q Consensus 80 ---------e~~~~Ar~~~~~a~G~--~-I~li~GdA~evL~~L--~~fDfVFIDa~K-~~Y~~~f~~~~~-l~~GgvIV 143 (223)
..++.|++||+++ |+ . |+++.|||.|+|+++ .+||||||||+| +.|..+|+.+.+ ++|||+||
T Consensus 163 ~~~~~~~~~~~~~~ar~n~~~~-gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~y~~~~~~Le~~~p~L~pGGiIv 241 (282)
T 2wk1_A 163 LHRRNSVLAVSEEEVRRNFRNY-DLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDLYESTWDTLTNLYPKVSVGGYVI 241 (282)
T ss_dssp GGGGHHHHCCCHHHHHHHHHHT-TCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCSHHHHHHHHHHHGGGEEEEEEEE
T ss_pred cccccccchhHHHHHHHHHHHc-CCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCccccHHHHHHHHHhhcCCCEEEE
Confidence 2578899999999 98 3 999999999999987 379999999999 457899997755 59999999
Q ss_pred EeCCCC-CCccccccccccccccCCCceEEEEeecCCceEEEEE
Q 027409 144 FKNAFQ-RSTSGLRWQGQGVLDRGTRVVRSVFLPVGQGLDIVHV 186 (223)
Q Consensus 144 ~DNvl~-~g~~~~~~~~r~~v~~~~~~~~t~lLPiGDGl~vs~k 186 (223)
+||+.+ .|+. .+++. ..++ .++...+++++-+...-+|
T Consensus 242 ~DD~~~~~G~~-~Av~E--f~~~--~~i~~~i~~~~~~~v~~rk 280 (282)
T 2wk1_A 242 VDDYMMCPPCK-DAVDE--YRAK--FDIADELITIDRDGVYWQR 280 (282)
T ss_dssp ESSCTTCHHHH-HHHHH--HHHH--TTCCSCCEECSSSCEEEEC
T ss_pred EcCCCCCHHHH-HHHHH--HHHh--cCCceEEEEecCEEEEEEe
Confidence 999854 5431 11221 1111 2256668888766555444
No 17
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.68 E-value=1.2e-16 Score=136.71 Aligned_cols=117 Identities=9% Similarity=0.061 Sum_probs=98.1
Q ss_pred CCc-HHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhc--CCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEE
Q 027409 24 IKE-SGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAA--RHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVI 100 (223)
Q Consensus 24 ii~-p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~--~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li 100 (223)
+.. |+++.+|..++...++++|||||||+|| ++++||... ..++++|++||+++++++.|+ .. +-.|+++
T Consensus 63 ~~~~p~~~~~l~~~l~~~~~~~VLDiG~GtG~--~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~----~~-~~~v~~~ 135 (236)
T 2bm8_A 63 MLKDPDTQAVYHDMLWELRPRTIVELGVYNGG--SLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA----SD-MENITLH 135 (236)
T ss_dssp CCSCHHHHHHHHHHHHHHCCSEEEEECCTTSH--HHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG----GG-CTTEEEE
T ss_pred ccCCHHHHHHHHHHHHhcCCCEEEEEeCCCCH--HHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh----cc-CCceEEE
Confidence 455 9999999999999999999999999999 788887642 245789999999999999887 22 3239999
Q ss_pred ecchHHH--hcCC-C-CccEEEEeCCCcccHHHHHHh-c-cCCCceEEEEeCC
Q 027409 101 VRQAEEV--MGEL-K-GVDFLVVDCTSKDFARVLRFA-R-FSNKGAVLAFKNA 147 (223)
Q Consensus 101 ~GdA~ev--L~~L-~-~fDfVFIDa~K~~Y~~~f~~~-~-~l~~GgvIV~DNv 147 (223)
.||+.+. ++.+ + +||+||+|+...+|..+|..+ + .|+|||+++++++
T Consensus 136 ~gD~~~~~~l~~~~~~~fD~I~~d~~~~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 136 QGDCSDLTTFEHLREMAHPLIFIDNAHANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp ECCSSCSGGGGGGSSSCSSEEEEESSCSSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred ECcchhHHHHHhhccCCCCEEEECCchHhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 9999875 5554 3 699999999998999999855 4 7899999999986
No 18
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.61 E-value=1e-14 Score=130.87 Aligned_cols=106 Identities=17% Similarity=0.081 Sum_probs=91.5
Q ss_pred HHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEecchHHHhcCCCC
Q 027409 35 AMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVRQAEEVMGELKG 113 (223)
Q Consensus 35 ~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~GdA~evL~~L~~ 113 (223)
.|++...+.+|||||||+|+ .+++.+|. .++++|++||+|+++++.||++++++ |+. |+++.|||.+. + -++
T Consensus 116 ~la~l~~g~rVLDIGcG~G~-~ta~~lA~---~~ga~V~gIDis~~~l~~Ar~~~~~~-gl~~v~~v~gDa~~l-~-d~~ 188 (298)
T 3fpf_A 116 ALGRFRRGERAVFIGGGPLP-LTGILLSH---VYGMRVNVVEIEPDIAELSRKVIEGL-GVDGVNVITGDETVI-D-GLE 188 (298)
T ss_dssp HHTTCCTTCEEEEECCCSSC-HHHHHHHH---TTCCEEEEEESSHHHHHHHHHHHHHH-TCCSEEEEESCGGGG-G-GCC
T ss_pred HHcCCCCcCEEEEECCCccH-HHHHHHHH---ccCCEEEEEECCHHHHHHHHHHHHhc-CCCCeEEEECchhhC-C-CCC
Confidence 36788999999999999874 25566653 24789999999999999999999999 987 99999999984 4 258
Q ss_pred ccEEEEeCCCcccHHHHHHh-ccCCCceEEEEeCC
Q 027409 114 VDFLVVDCTSKDFARVLRFA-RFSNKGAVLAFKNA 147 (223)
Q Consensus 114 fDfVFIDa~K~~Y~~~f~~~-~~l~~GgvIV~DNv 147 (223)
||+||+++...++.++|+.+ +.++|||.+++.+.
T Consensus 189 FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 189 FDVLMVAALAEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp CSEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred cCEEEECCCccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 99999999999999999865 67899999999884
No 19
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.60 E-value=1.6e-14 Score=118.57 Aligned_cols=120 Identities=9% Similarity=0.013 Sum_probs=100.9
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEec
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVR 102 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~G 102 (223)
+..++....+-..+......+|||||||+|+ .++.+|.. .+.++++.+|+++++++.|++++++. |+. ++++.|
T Consensus 23 ~~~~~i~~~~l~~l~~~~~~~vLDiG~G~G~--~~~~la~~--~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~v~~~~~ 97 (204)
T 3e05_A 23 ITKQEVRAVTLSKLRLQDDLVMWDIGAGSAS--VSIEASNL--MPNGRIFALERNPQYLGFIRDNLKKF-VARNVTLVEA 97 (204)
T ss_dssp SCCHHHHHHHHHHTTCCTTCEEEEETCTTCH--HHHHHHHH--CTTSEEEEEECCHHHHHHHHHHHHHH-TCTTEEEEEC
T ss_pred CChHHHHHHHHHHcCCCCCCEEEEECCCCCH--HHHHHHHH--CCCCEEEEEeCCHHHHHHHHHHHHHh-CCCcEEEEeC
Confidence 4555665655555666778899999999998 77777754 34689999999999999999999999 987 999999
Q ss_pred chHHHhcCCCCccEEEEeCCCcccHHHHHHh-ccCCCceEEEEeCCC
Q 027409 103 QAEEVMGELKGVDFLVVDCTSKDFARVLRFA-RFSNKGAVLAFKNAF 148 (223)
Q Consensus 103 dA~evL~~L~~fDfVFIDa~K~~Y~~~f~~~-~~l~~GgvIV~DNvl 148 (223)
|+.+.++.++.||+||++....++..+++.+ +.++|||.+++....
T Consensus 98 d~~~~~~~~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 144 (204)
T 3e05_A 98 FAPEGLDDLPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAVT 144 (204)
T ss_dssp CTTTTCTTSCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEECB
T ss_pred ChhhhhhcCCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEecc
Confidence 9999888777899999999888899999865 678999999997653
No 20
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.56 E-value=6e-14 Score=116.88 Aligned_cols=116 Identities=16% Similarity=0.142 Sum_probs=96.2
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEe
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIV 101 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~ 101 (223)
+..+++...+-..+......+|||||||+|+ .++.+|.. +++|+.+|+++++++.|++++++. |+. ++++.
T Consensus 38 ~~~~~~~~~~l~~l~~~~~~~vLDlGcG~G~--~~~~la~~----~~~v~~vD~s~~~~~~a~~~~~~~-g~~~~v~~~~ 110 (204)
T 3njr_A 38 ITKSPMRALTLAALAPRRGELLWDIGGGSGS--VSVEWCLA----GGRAITIEPRADRIENIQKNIDTY-GLSPRMRAVQ 110 (204)
T ss_dssp CCCHHHHHHHHHHHCCCTTCEEEEETCTTCH--HHHHHHHT----TCEEEEEESCHHHHHHHHHHHHHT-TCTTTEEEEE
T ss_pred CCcHHHHHHHHHhcCCCCCCEEEEecCCCCH--HHHHHHHc----CCEEEEEeCCHHHHHHHHHHHHHc-CCCCCEEEEe
Confidence 4555666666666667778899999999998 77777653 689999999999999999999998 987 99999
Q ss_pred cchHHHhcCCCCccEEEEeCCCcccHHHHHHh-ccCCCceEEEEeCCC
Q 027409 102 RQAEEVMGELKGVDFLVVDCTSKDFARVLRFA-RFSNKGAVLAFKNAF 148 (223)
Q Consensus 102 GdA~evL~~L~~fDfVFIDa~K~~Y~~~f~~~-~~l~~GgvIV~DNvl 148 (223)
||+.+.++.+..||+||+++.. ... +++.+ +.|+|||.+++....
T Consensus 111 ~d~~~~~~~~~~~D~v~~~~~~-~~~-~l~~~~~~LkpgG~lv~~~~~ 156 (204)
T 3njr_A 111 GTAPAALADLPLPEAVFIGGGG-SQA-LYDRLWEWLAPGTRIVANAVT 156 (204)
T ss_dssp SCTTGGGTTSCCCSEEEECSCC-CHH-HHHHHHHHSCTTCEEEEEECS
T ss_pred CchhhhcccCCCCCEEEECCcc-cHH-HHHHHHHhcCCCcEEEEEecC
Confidence 9999988877789999999844 344 77755 678999999987764
No 21
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.56 E-value=1.7e-14 Score=122.77 Aligned_cols=112 Identities=14% Similarity=-0.003 Sum_probs=88.5
Q ss_pred HHHHHHHh--cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhc
Q 027409 32 LLSAMAAG--WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMG 109 (223)
Q Consensus 32 fL~~L~~~--~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~ 109 (223)
+...+++. .+..+|||||||.|+ ++.+++. ....++|.||++|++++.|+++.++. +..++++.|||.+++.
T Consensus 49 ~m~~~a~~~~~~G~rVLdiG~G~G~--~~~~~~~---~~~~~v~~id~~~~~~~~a~~~~~~~-~~~~~~~~~~a~~~~~ 122 (236)
T 3orh_A 49 YMHALAAAASSKGGRVLEVGFGMAI--AASKVQE---APIDEHWIIECNDGVFQRLRDWAPRQ-THKVIPLKGLWEDVAP 122 (236)
T ss_dssp HHHHHHHHHTTTCEEEEEECCTTSH--HHHHHTT---SCEEEEEEEECCHHHHHHHHHHGGGC-SSEEEEEESCHHHHGG
T ss_pred HHHHHHHhhccCCCeEEEECCCccH--HHHHHHH---hCCcEEEEEeCCHHHHHHHHHHHhhC-CCceEEEeehHHhhcc
Confidence 44444444 345799999999998 6767753 22368999999999999999999998 8889999999999988
Q ss_pred CC--CCccEEEEeCCCccc--------HHHHH-HhccCCCceEEEEeCCCC
Q 027409 110 EL--KGVDFLVVDCTSKDF--------ARVLR-FARFSNKGAVLAFKNAFQ 149 (223)
Q Consensus 110 ~L--~~fDfVFIDa~K~~Y--------~~~f~-~~~~l~~GgvIV~DNvl~ 149 (223)
.+ ..||.||.|+....+ ..+++ ..++|||||++++.|...
T Consensus 123 ~~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~~~~ 173 (236)
T 3orh_A 123 TLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTS 173 (236)
T ss_dssp GSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHH
T ss_pred cccccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEecCC
Confidence 77 379999999865433 45665 347889999999998653
No 22
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.54 E-value=1e-14 Score=130.80 Aligned_cols=143 Identities=10% Similarity=0.078 Sum_probs=97.8
Q ss_pred hcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhh-cCc--e-EEEEecchHHHhcCC-CC
Q 027409 39 GWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDV-VGW--V-SEVIVRQAEEVMGEL-KG 113 (223)
Q Consensus 39 ~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a-~G~--~-I~li~GdA~evL~~L-~~ 113 (223)
..++++|||||||.|+ ++.+++. ..+.++|+.+|+|++.++.|++++... .|+ . |+++.|||.+.++.. +.
T Consensus 106 ~~~~~~VLdIG~G~G~--~~~~l~~--~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~ 181 (314)
T 2b2c_A 106 HPDPKRVLIIGGGDGG--ILREVLK--HESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNE 181 (314)
T ss_dssp SSSCCEEEEESCTTSH--HHHHHTT--CTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTC
T ss_pred CCCCCEEEEEcCCcCH--HHHHHHH--cCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCC
Confidence 4588999999999998 7777753 335689999999999999999999753 133 2 999999999988654 47
Q ss_pred ccEEEEeC------CCccc-HHHHHHh-ccCCCceEEEEeC--CCCCCc--cccccccccccccCCCceEEEEeec---C
Q 027409 114 VDFLVVDC------TSKDF-ARVLRFA-RFSNKGAVLAFKN--AFQRST--SGLRWQGQGVLDRGTRVVRSVFLPV---G 178 (223)
Q Consensus 114 fDfVFIDa------~K~~Y-~~~f~~~-~~l~~GgvIV~DN--vl~~g~--~~~~~~~r~~v~~~~~~~~t~lLPi---G 178 (223)
||+||+|+ .+..| .++|+.+ +.|+|||++++++ .+.... .......+.+. ....+.++.+|. |
T Consensus 182 fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~vF--~~v~~~~~~iP~~~~g 259 (314)
T 2b2c_A 182 FDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGESVWLHLPLIAHLVAFNRKIF--PAVTYAQSIVSTYPSG 259 (314)
T ss_dssp EEEEEECCC-------------HHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHHC--SEEEEEEEECTTSGGG
T ss_pred ceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCCcccCHHHHHHHHHHHHHHC--CcceEEEEEecCcCCC
Confidence 99999998 34556 7888866 5679999999987 332211 00000000011 123366778888 5
Q ss_pred C-ceEEEEEc
Q 027409 179 Q-GLDIVHVG 187 (223)
Q Consensus 179 D-Gl~vs~k~ 187 (223)
+ |+.++.+.
T Consensus 260 ~~g~~~ask~ 269 (314)
T 2b2c_A 260 SMGYLICAKN 269 (314)
T ss_dssp EEEEEEEESS
T ss_pred ceEEEEEeCC
Confidence 6 78888765
No 23
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.54 E-value=2.9e-14 Score=117.05 Aligned_cols=113 Identities=9% Similarity=0.040 Sum_probs=94.6
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEec
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVR 102 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~G 102 (223)
+..|.....+..++...+..+|||||||+|+ .+++++.. +++++.+|+++++++.|++++++. |+. ++++.|
T Consensus 60 ~~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~--~~~~la~~----~~~v~~vD~~~~~~~~a~~~~~~~-~~~~v~~~~~ 132 (210)
T 3lbf_A 60 ISQPYMVARMTELLELTPQSRVLEIGTGSGY--QTAILAHL----VQHVCSVERIKGLQWQARRRLKNL-DLHNVSTRHG 132 (210)
T ss_dssp ECCHHHHHHHHHHTTCCTTCEEEEECCTTSH--HHHHHHHH----SSEEEEEESCHHHHHHHHHHHHHT-TCCSEEEEES
T ss_pred eCCHHHHHHHHHhcCCCCCCEEEEEcCCCCH--HHHHHHHh----CCEEEEEecCHHHHHHHHHHHHHc-CCCceEEEEC
Confidence 4477777777777777888999999999998 77777754 589999999999999999999998 988 999999
Q ss_pred chHHHhcCCCCccEEEEeCCCcccHHHHHHhccCCCceEEEEe
Q 027409 103 QAEEVMGELKGVDFLVVDCTSKDFARVLRFARFSNKGAVLAFK 145 (223)
Q Consensus 103 dA~evL~~L~~fDfVFIDa~K~~Y~~~f~~~~~l~~GgvIV~D 145 (223)
|+.+.+..-++||+|++++....+++ +..+.++|||.+++.
T Consensus 133 d~~~~~~~~~~~D~i~~~~~~~~~~~--~~~~~L~pgG~lv~~ 173 (210)
T 3lbf_A 133 DGWQGWQARAPFDAIIVTAAPPEIPT--ALMTQLDEGGILVLP 173 (210)
T ss_dssp CGGGCCGGGCCEEEEEESSBCSSCCT--HHHHTEEEEEEEEEE
T ss_pred CcccCCccCCCccEEEEccchhhhhH--HHHHhcccCcEEEEE
Confidence 99986655458999999988777664 345677999988874
No 24
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.52 E-value=3.2e-13 Score=109.68 Aligned_cols=111 Identities=15% Similarity=0.235 Sum_probs=87.6
Q ss_pred HHHHHHHHh--cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEecchHHH
Q 027409 31 ELLSAMAAG--WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVRQAEEV 107 (223)
Q Consensus 31 ~fL~~L~~~--~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~GdA~ev 107 (223)
.++..+... ...++|||+|||+|+ .+++++. . ..++|+.+|+++++++.|+++++.. |+. ++++.||+.+.
T Consensus 32 ~l~~~l~~~~~~~~~~vLDlgcG~G~--~~~~~~~--~-~~~~v~~vD~~~~~~~~a~~~~~~~-~~~~v~~~~~d~~~~ 105 (189)
T 3p9n_A 32 SLFNIVTARRDLTGLAVLDLYAGSGA--LGLEALS--R-GAASVLFVESDQRSAAVIARNIEAL-GLSGATLRRGAVAAV 105 (189)
T ss_dssp HHHHHHHHHSCCTTCEEEEETCTTCH--HHHHHHH--T-TCSEEEEEECCHHHHHHHHHHHHHH-TCSCEEEEESCHHHH
T ss_pred HHHHHHHhccCCCCCEEEEeCCCcCH--HHHHHHH--C-CCCeEEEEECCHHHHHHHHHHHHHc-CCCceEEEEccHHHH
Confidence 344444443 577899999999998 6766553 2 3468999999999999999999999 887 99999999998
Q ss_pred hcCC--CCccEEEEeCCCcc----cHHHHHHh-c--cCCCceEEEEeCC
Q 027409 108 MGEL--KGVDFLVVDCTSKD----FARVLRFA-R--FSNKGAVLAFKNA 147 (223)
Q Consensus 108 L~~L--~~fDfVFIDa~K~~----Y~~~f~~~-~--~l~~GgvIV~DNv 147 (223)
++.+ +.||+||+|..-.. +.+.++.+ + .|+|||++++..-
T Consensus 106 ~~~~~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 106 VAAGTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp HHHCCSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred HhhccCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEec
Confidence 8654 48999999975443 56666654 4 6799999998764
No 25
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.52 E-value=1.6e-13 Score=116.04 Aligned_cols=100 Identities=9% Similarity=0.055 Sum_probs=84.8
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEecchHHHhc--CC-CCcc
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVRQAEEVMG--EL-KGVD 115 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~GdA~evL~--~L-~~fD 115 (223)
.+.++|||||||+|+ .+++||.. .++++|+.+|+++++++.|++++++. |++ |+++.||+.+... .. +.||
T Consensus 69 ~~~~~vLDiG~G~G~--~~~~la~~--~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~v~~~~~d~~~~~~~~~~~~~fD 143 (240)
T 1xdz_A 69 NQVNTICDVGAGAGF--PSLPIKIC--FPHLHVTIVDSLNKRITFLEKLSEAL-QLENTTFCHDRAETFGQRKDVRESYD 143 (240)
T ss_dssp GGCCEEEEECSSSCT--THHHHHHH--CTTCEEEEEESCHHHHHHHHHHHHHH-TCSSEEEEESCHHHHTTCTTTTTCEE
T ss_pred CCCCEEEEecCCCCH--HHHHHHHh--CCCCEEEEEeCCHHHHHHHHHHHHHc-CCCCEEEEeccHHHhcccccccCCcc
Confidence 477899999999999 77788753 34689999999999999999999999 987 9999999988652 23 4799
Q ss_pred EEEEeCCCcccHHHHHHh-ccCCCceEEEEe
Q 027409 116 FLVVDCTSKDFARVLRFA-RFSNKGAVLAFK 145 (223)
Q Consensus 116 fVFIDa~K~~Y~~~f~~~-~~l~~GgvIV~D 145 (223)
+|+.++ ..++..+++.+ +.|+|||.+++-
T Consensus 144 ~V~~~~-~~~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 144 IVTARA-VARLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp EEEEEC-CSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEEEec-cCCHHHHHHHHHHhcCCCCEEEEE
Confidence 999998 57789999876 667999998763
No 26
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.51 E-value=4.1e-14 Score=125.95 Aligned_cols=142 Identities=13% Similarity=0.079 Sum_probs=100.4
Q ss_pred hcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHh--hcCc--e-EEEEecchHHHhcCC-C
Q 027409 39 GWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYD--VVGW--V-SEVIVRQAEEVMGEL-K 112 (223)
Q Consensus 39 ~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~--a~G~--~-I~li~GdA~evL~~L-~ 112 (223)
..++++|||||||+|+ .+++++. ..+.++|+.+|+|++.++.|++++.. . |+ . ++++.|||.+.|+.. +
T Consensus 93 ~~~~~~VLdiG~G~G~--~~~~l~~--~~~~~~v~~vDid~~~i~~ar~~~~~~~~-~~~~~rv~v~~~Da~~~l~~~~~ 167 (304)
T 2o07_A 93 HPNPRKVLIIGGGDGG--VLREVVK--HPSVESVVQCEIDEDVIQVSKKFLPGMAI-GYSSSKLTLHVGDGFEFMKQNQD 167 (304)
T ss_dssp SSSCCEEEEEECTTSH--HHHHHTT--CTTCCEEEEEESCHHHHHHHHHHCHHHHG-GGGCTTEEEEESCHHHHHHTCSS
T ss_pred CCCCCEEEEECCCchH--HHHHHHH--cCCCCEEEEEECCHHHHHHHHHHhHHhhc-ccCCCcEEEEECcHHHHHhhCCC
Confidence 3588999999999998 7777753 33468999999999999999999986 4 55 2 999999999988765 4
Q ss_pred CccEEEEeCCCc-------ccHHHHHHh-ccCCCceEEEEeC-CCCCCcc---ccccccccccccCCCceEEEEeec---
Q 027409 113 GVDFLVVDCTSK-------DFARVLRFA-RFSNKGAVLAFKN-AFQRSTS---GLRWQGQGVLDRGTRVVRSVFLPV--- 177 (223)
Q Consensus 113 ~fDfVFIDa~K~-------~Y~~~f~~~-~~l~~GgvIV~DN-vl~~g~~---~~~~~~r~~v~~~~~~~~t~lLPi--- 177 (223)
.||+||+|+... .+.++|+.+ +.|+|||++++++ ..+...+ ......+.+. ....+.++.+|.
T Consensus 168 ~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~f--~~v~~~~~~vP~~~~ 245 (304)
T 2o07_A 168 AFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSLF--PVVAYAYCTIPTYPS 245 (304)
T ss_dssp CEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEEECTTTCHHHHHHHHHHHHHHC--SEEEEEEEECTTSGG
T ss_pred CceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCCcccchHHHHHHHHHHHHhC--CCceeEEEEeccccC
Confidence 799999998753 356788766 5679999999998 3343311 1100000011 123366677887
Q ss_pred C-CceEEEEEc
Q 027409 178 G-QGLDIVHVG 187 (223)
Q Consensus 178 G-DGl~vs~k~ 187 (223)
| .|+.++.+.
T Consensus 246 g~~g~~~as~~ 256 (304)
T 2o07_A 246 GQIGFMLCSKN 256 (304)
T ss_dssp GEEEEEEEESS
T ss_pred cceEEEEEeCC
Confidence 4 378877765
No 27
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.50 E-value=1e-13 Score=110.94 Aligned_cols=103 Identities=9% Similarity=0.126 Sum_probs=84.5
Q ss_pred hcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCC-CCcc
Q 027409 39 GWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGEL-KGVD 115 (223)
Q Consensus 39 ~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L-~~fD 115 (223)
..+.++|||+|||+|+ .+++++.. ..++++.+|+++++++.|+++++.. |+. ++++.+|+.+.++.+ +.||
T Consensus 29 ~~~~~~vLDlGcG~G~--~~~~l~~~---~~~~v~~vD~~~~~~~~a~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~fD 102 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGG--LAIEAVSR---GMSAAVLVEKNRKAQAIIQDNIIMT-KAENRFTLLKMEAERAIDCLTGRFD 102 (177)
T ss_dssp CCCSCEEEEETCTTCH--HHHHHHHT---TCCEEEEECCCHHHHHHHHHHHHTT-TCGGGEEEECSCHHHHHHHBCSCEE
T ss_pred hcCCCeEEEeCCCCCH--HHHHHHHc---CCCEEEEEECCHHHHHHHHHHHHHc-CCCCceEEEECcHHHhHHhhcCCCC
Confidence 4567899999999998 67777642 3469999999999999999999998 986 999999999987755 4799
Q ss_pred EEEEeCC--CcccHHHHHHh---ccCCCceEEEEeCC
Q 027409 116 FLVVDCT--SKDFARVLRFA---RFSNKGAVLAFKNA 147 (223)
Q Consensus 116 fVFIDa~--K~~Y~~~f~~~---~~l~~GgvIV~DNv 147 (223)
+||.|.. ...+.+.++.+ +.|+|||++++..-
T Consensus 103 ~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~ 139 (177)
T 2esr_A 103 LVFLDPPYAKETIVATIEALAAKNLLSEQVMVVCETD 139 (177)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred EEEECCCCCcchHHHHHHHHHhCCCcCCCcEEEEEEC
Confidence 9999965 34566677655 56799999988653
No 28
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.48 E-value=6.8e-13 Score=105.54 Aligned_cols=117 Identities=15% Similarity=0.147 Sum_probs=97.1
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCc-e-EEEEe
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGW-V-SEVIV 101 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~-~-I~li~ 101 (223)
...++..+.+...+......+|||+|||.|+ .++.++.. .++++.+|.+++.++.|+++++.. |+ . ++++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~vldiG~G~G~--~~~~l~~~----~~~v~~~D~~~~~~~~a~~~~~~~-~~~~~~~~~~ 88 (192)
T 1l3i_A 16 PTAMEVRCLIMCLAEPGKNDVAVDVGCGTGG--VTLELAGR----VRRVYAIDRNPEAISTTEMNLQRH-GLGDNVTLME 88 (192)
T ss_dssp CCCHHHHHHHHHHHCCCTTCEEEEESCTTSH--HHHHHHTT----SSEEEEEESCHHHHHHHHHHHHHT-TCCTTEEEEE
T ss_pred CChHHHHHHHHHhcCCCCCCEEEEECCCCCH--HHHHHHHh----cCEEEEEECCHHHHHHHHHHHHHc-CCCcceEEEe
Confidence 3455666666666677788999999999998 67666532 279999999999999999999998 98 3 99999
Q ss_pred cchHHHhcCCCCccEEEEeCCCcccHHHHHHh-ccCCCceEEEEeCC
Q 027409 102 RQAEEVMGELKGVDFLVVDCTSKDFARVLRFA-RFSNKGAVLAFKNA 147 (223)
Q Consensus 102 GdA~evL~~L~~fDfVFIDa~K~~Y~~~f~~~-~~l~~GgvIV~DNv 147 (223)
+|+.+.++.++.||+|+++..-.+...+++.+ +.++|||.++....
T Consensus 89 ~d~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~~ 135 (192)
T 1l3i_A 89 GDAPEALCKIPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTAI 135 (192)
T ss_dssp SCHHHHHTTSCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred cCHHHhcccCCCCCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 99999888777899999998777888899865 56799999887654
No 29
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.47 E-value=5e-13 Score=110.79 Aligned_cols=109 Identities=11% Similarity=0.107 Sum_probs=86.2
Q ss_pred HHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEecchHHHhcC
Q 027409 32 LLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVRQAEEVMGE 110 (223)
Q Consensus 32 fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~GdA~evL~~ 110 (223)
++..+......++|||+|||+|+ .+++++.. . ..+|+.+|+++++++.|+++++.. |+. |+++.+|+.+.++.
T Consensus 45 l~~~l~~~~~~~~vLDlgcG~G~--~~~~l~~~--~-~~~V~~vD~s~~~l~~a~~~~~~~-~~~~v~~~~~D~~~~~~~ 118 (202)
T 2fpo_A 45 LFNWLAPVIVDAQCLDCFAGSGA--LGLEALSR--Y-AAGATLIEMDRAVSQQLIKNLATL-KAGNARVVNSNAMSFLAQ 118 (202)
T ss_dssp HHHHHHHHHTTCEEEETTCTTCH--HHHHHHHT--T-CSEEEEECSCHHHHHHHHHHHHHT-TCCSEEEECSCHHHHHSS
T ss_pred HHHHHHhhcCCCeEEEeCCCcCH--HHHHHHhc--C-CCEEEEEECCHHHHHHHHHHHHHc-CCCcEEEEECCHHHHHhh
Confidence 33333332367899999999998 77765532 1 258999999999999999999999 986 99999999998876
Q ss_pred C-CCccEEEEeCC--CcccHHHHHHhc---cCCCceEEEEeC
Q 027409 111 L-KGVDFLVVDCT--SKDFARVLRFAR---FSNKGAVLAFKN 146 (223)
Q Consensus 111 L-~~fDfVFIDa~--K~~Y~~~f~~~~---~l~~GgvIV~DN 146 (223)
. +.||+||+|.. ...+.++++.+. .++|||++++..
T Consensus 119 ~~~~fD~V~~~~p~~~~~~~~~l~~l~~~~~L~pgG~l~i~~ 160 (202)
T 2fpo_A 119 KGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVES 160 (202)
T ss_dssp CCCCEEEEEECCSSSTTTHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred cCCCCCEEEECCCCCCCcHHHHHHHHHhcCccCCCcEEEEEE
Confidence 5 47999999976 567777887652 479999887664
No 30
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.47 E-value=4.6e-13 Score=106.25 Aligned_cols=115 Identities=14% Similarity=0.111 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchH
Q 027409 28 GVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAE 105 (223)
Q Consensus 28 ~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~ 105 (223)
+..+.+...+......+|||||||+|+ .++.++.. .++++++.+|+++++++.|++++++. |+. + ++.+|+.
T Consensus 12 ~~~~~~~~~~~~~~~~~vldiG~G~G~--~~~~l~~~--~~~~~v~~vD~~~~~~~~a~~~~~~~-~~~~~~-~~~~d~~ 85 (178)
T 3hm2_A 12 HVRALAISALAPKPHETLWDIGGGSGS--IAIEWLRS--TPQTTAVCFEISEERRERILSNAINL-GVSDRI-AVQQGAP 85 (178)
T ss_dssp HHHHHHHHHHCCCTTEEEEEESTTTTH--HHHHHHTT--SSSEEEEEECSCHHHHHHHHHHHHTT-TCTTSE-EEECCTT
T ss_pred HHHHHHHHHhcccCCCeEEEeCCCCCH--HHHHHHHH--CCCCeEEEEeCCHHHHHHHHHHHHHh-CCCCCE-EEecchH
Confidence 344444444455566799999999998 77777643 24689999999999999999999998 886 8 8999999
Q ss_pred HHhcCC-CCccEEEEeCCCcccHHHHHHh-ccCCCceEEEEeCCCC
Q 027409 106 EVMGEL-KGVDFLVVDCTSKDFARVLRFA-RFSNKGAVLAFKNAFQ 149 (223)
Q Consensus 106 evL~~L-~~fDfVFIDa~K~~Y~~~f~~~-~~l~~GgvIV~DNvl~ 149 (223)
+.++.. +.||+||++..-.+ ..+++.+ +.++|||.++......
T Consensus 86 ~~~~~~~~~~D~i~~~~~~~~-~~~l~~~~~~L~~gG~l~~~~~~~ 130 (178)
T 3hm2_A 86 RAFDDVPDNPDVIFIGGGLTA-PGVFAAAWKRLPVGGRLVANAVTV 130 (178)
T ss_dssp GGGGGCCSCCSEEEECC-TTC-TTHHHHHHHTCCTTCEEEEEECSH
T ss_pred hhhhccCCCCCEEEECCcccH-HHHHHHHHHhcCCCCEEEEEeecc
Confidence 888877 68999999887655 7788755 6789999999876543
No 31
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.46 E-value=4.6e-13 Score=120.98 Aligned_cols=108 Identities=13% Similarity=0.093 Sum_probs=86.1
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhh-cCc--e-EEEEecchHHHhcCC--CC
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDV-VGW--V-SEVIVRQAEEVMGEL--KG 113 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a-~G~--~-I~li~GdA~evL~~L--~~ 113 (223)
.++++|||||||.|+ .+++++. ..+.++|+++|+|+++++.|++++.+. .|+ . |+++.||+.+.++.+ +.
T Consensus 119 ~~~~~VLdIG~G~G~--~a~~la~--~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~ 194 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGG--VLREVAR--HASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGS 194 (334)
T ss_dssp SCCCEEEEETCSSSH--HHHHHTT--CTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTC
T ss_pred CCCCEEEEECCCccH--HHHHHHH--cCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCC
Confidence 588999999999998 7777753 334679999999999999999999762 144 2 999999999998775 47
Q ss_pred ccEEEEeCCCc----c---cHHHHHHh-ccCCCceEEEEe-CCCCCC
Q 027409 114 VDFLVVDCTSK----D---FARVLRFA-RFSNKGAVLAFK-NAFQRS 151 (223)
Q Consensus 114 fDfVFIDa~K~----~---Y~~~f~~~-~~l~~GgvIV~D-Nvl~~g 151 (223)
||+||+|+... . +.++|+.+ +.|+|||+++++ +..+.+
T Consensus 195 fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~ 241 (334)
T 1xj5_A 195 YDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLWLH 241 (334)
T ss_dssp EEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCTTTC
T ss_pred ccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCCcccc
Confidence 99999998521 1 67888866 567999999997 444433
No 32
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=99.46 E-value=1.5e-13 Score=120.18 Aligned_cols=104 Identities=15% Similarity=0.094 Sum_probs=78.4
Q ss_pred hcCCCeEEEEccCcchHHHHHHHHHhc------CCC----CcEEEEEeCCc--------------hHHHHHHHHHHh---
Q 027409 39 GWNAKLIVEAWTHGGPITTSIGLAIAA------RHT----CARHVCIVPDE--------------RSRLAYVKAMYD--- 91 (223)
Q Consensus 39 ~~~ak~ILEIGT~~Gys~Stl~la~A~------~~~----~g~i~TIE~d~--------------e~~~~Ar~~~~~--- 91 (223)
..++.+|||||+|+|| ++++++.+. .+. ..+++++|.+| +....|+++++.
T Consensus 58 ~~~~~~ILEiGfGtG~--n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~ 135 (257)
T 2qy6_A 58 PHPLFVVAESGFGTGL--NFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPM 135 (257)
T ss_dssp SSSEEEEEESCCTTSH--HHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCC
T ss_pred CCCCCEEEEECCChHH--HHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccc
Confidence 3467899999999999 666655443 332 25899999998 445577888775
Q ss_pred ---------h-cCce-EEEEecchHHHhcCCC-----CccEEEEeCCC--cc----cHHHHHHh-ccCCCceEEEE
Q 027409 92 ---------V-VGWV-SEVIVRQAEEVMGELK-----GVDFLVVDCTS--KD----FARVLRFA-RFSNKGAVLAF 144 (223)
Q Consensus 92 ---------a-~G~~-I~li~GdA~evL~~L~-----~fDfVFIDa~K--~~----Y~~~f~~~-~~l~~GgvIV~ 144 (223)
. -|.. ++++.|||.++|+.+. .||.||+|+.. .+ |.++|+.+ +.++|||++++
T Consensus 136 ~~~g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 136 PLPGCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp SCSEEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred cccchhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 1 0222 8999999999999873 69999999843 23 78899866 67799999997
No 33
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.45 E-value=1.8e-12 Score=102.50 Aligned_cols=114 Identities=11% Similarity=0.110 Sum_probs=94.0
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEec
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVR 102 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~G 102 (223)
...+...+.+...+...+..+|||+|||+|+ .++.++. .+.+++.+|.++++++.|++++++. |+. ++++.+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~--~~~~l~~----~~~~v~~vD~~~~~~~~a~~~~~~~-~~~~~~~~~~ 90 (183)
T 2yxd_A 18 ITKEEIRAVSIGKLNLNKDDVVVDVGCGSGG--MTVEIAK----RCKFVYAIDYLDGAIEVTKQNLAKF-NIKNCQIIKG 90 (183)
T ss_dssp CCCHHHHHHHHHHHCCCTTCEEEEESCCCSH--HHHHHHT----TSSEEEEEECSHHHHHHHHHHHHHT-TCCSEEEEES
T ss_pred cCHHHHHHHHHHHcCCCCCCEEEEeCCCCCH--HHHHHHh----cCCeEEEEeCCHHHHHHHHHHHHHc-CCCcEEEEEC
Confidence 4456666666666677788899999999998 6767753 4689999999999999999999999 987 999999
Q ss_pred chHHHhcCCCCccEEEEeCCCcccHHHHHHhccCCCceEEEEeCC
Q 027409 103 QAEEVMGELKGVDFLVVDCTSKDFARVLRFARFSNKGAVLAFKNA 147 (223)
Q Consensus 103 dA~evL~~L~~fDfVFIDa~K~~Y~~~f~~~~~l~~GgvIV~DNv 147 (223)
|+.+.++. +.||+|+.+.. .+...+++.+..+ |||.++....
T Consensus 91 d~~~~~~~-~~~D~i~~~~~-~~~~~~l~~~~~~-~gG~l~~~~~ 132 (183)
T 2yxd_A 91 RAEDVLDK-LEFNKAFIGGT-KNIEKIIEILDKK-KINHIVANTI 132 (183)
T ss_dssp CHHHHGGG-CCCSEEEECSC-SCHHHHHHHHHHT-TCCEEEEEES
T ss_pred CccccccC-CCCcEEEECCc-ccHHHHHHHHhhC-CCCEEEEEec
Confidence 99996665 58999999988 8888888877544 8888877653
No 34
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.45 E-value=9.3e-13 Score=109.07 Aligned_cols=110 Identities=10% Similarity=0.127 Sum_probs=86.8
Q ss_pred HHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCc--e-EEEEecchHHH
Q 027409 31 ELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGW--V-SEVIVRQAEEV 107 (223)
Q Consensus 31 ~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~--~-I~li~GdA~ev 107 (223)
.++..+....+.++|||+|||+|. .+++++. . ..++|+.+|+++++++.|++|++.. |+ . ++++.||+.+.
T Consensus 43 ~l~~~l~~~~~~~~vLDlGcGtG~--~~~~~~~--~-~~~~v~gvD~s~~~l~~a~~~~~~~-~~~~~~v~~~~~d~~~~ 116 (201)
T 2ift_A 43 TLFNWLMPYIHQSECLDGFAGSGS--LGFEALS--R-QAKKVTFLELDKTVANQLKKNLQTL-KCSSEQAEVINQSSLDF 116 (201)
T ss_dssp HHHHHHHHHHTTCEEEETTCTTCH--HHHHHHH--T-TCSEEEEECSCHHHHHHHHHHHHHT-TCCTTTEEEECSCHHHH
T ss_pred HHHHHHHHhcCCCeEEEcCCccCH--HHHHHHH--c-cCCEEEEEECCHHHHHHHHHHHHHh-CCCccceEEEECCHHHH
Confidence 334444433477899999999998 6766543 2 1368999999999999999999998 98 5 99999999998
Q ss_pred hcCC--CC-ccEEEEeCC--CcccHHHHHHh---ccCCCceEEEEeC
Q 027409 108 MGEL--KG-VDFLVVDCT--SKDFARVLRFA---RFSNKGAVLAFKN 146 (223)
Q Consensus 108 L~~L--~~-fDfVFIDa~--K~~Y~~~f~~~---~~l~~GgvIV~DN 146 (223)
++.+ +. ||+||+|.. .+.+.++++.+ +.|+|||++++..
T Consensus 117 ~~~~~~~~~fD~I~~~~~~~~~~~~~~l~~~~~~~~LkpgG~l~i~~ 163 (201)
T 2ift_A 117 LKQPQNQPHFDVVFLDPPFHFNLAEQAISLLCENNWLKPNALIYVET 163 (201)
T ss_dssp TTSCCSSCCEEEEEECCCSSSCHHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred HHhhccCCCCCEEEECCCCCCccHHHHHHHHHhcCccCCCcEEEEEE
Confidence 8764 47 999999976 56677888765 3579999887755
No 35
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.44 E-value=1.1e-12 Score=110.79 Aligned_cols=128 Identities=22% Similarity=0.189 Sum_probs=103.3
Q ss_pred HHHHHhhcccCCCCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHh
Q 027409 12 KAYIDTVKSCENIKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYD 91 (223)
Q Consensus 12 ~ayl~~l~~~~~ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~ 91 (223)
.+|...+.....++.|....++..++......+|||+|||+|+ .+++++... .++++++++|+++++++.|++++++
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~vldiG~G~G~--~~~~l~~~~-~~~~~v~~~D~~~~~~~~a~~~~~~ 140 (255)
T 3mb5_A 64 VDYLDKMKRGPQIVHPKDAALIVAYAGISPGDFIVEAGVGSGA--LTLFLANIV-GPEGRVVSYEIREDFAKLAWENIKW 140 (255)
T ss_dssp HHHHHHSCCCSCCCCHHHHHHHHHHTTCCTTCEEEEECCTTSH--HHHHHHHHH-CTTSEEEEECSCHHHHHHHHHHHHH
T ss_pred HHHHhhCccccccccHhHHHHHHHhhCCCCCCEEEEecCCchH--HHHHHHHHh-CCCeEEEEEecCHHHHHHHHHHHHH
Confidence 4566666666667888888888888888888999999999998 777777543 3468999999999999999999999
Q ss_pred hcCce--EEEEecchHHHhcCCCCccEEEEeCCCcccHHHHHHh-ccCCCceEEEEeC
Q 027409 92 VVGWV--SEVIVRQAEEVMGELKGVDFLVVDCTSKDFARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 92 a~G~~--I~li~GdA~evL~~L~~fDfVFIDa~K~~Y~~~f~~~-~~l~~GgvIV~DN 146 (223)
. |+. ++++.+|+.+.++. ..||+||+|.. ....+++.+ +.++|||.+++..
T Consensus 141 ~-~~~~~v~~~~~d~~~~~~~-~~~D~v~~~~~--~~~~~l~~~~~~L~~gG~l~~~~ 194 (255)
T 3mb5_A 141 A-GFDDRVTIKLKDIYEGIEE-ENVDHVILDLP--QPERVVEHAAKALKPGGFFVAYT 194 (255)
T ss_dssp H-TCTTTEEEECSCGGGCCCC-CSEEEEEECSS--CGGGGHHHHHHHEEEEEEEEEEE
T ss_pred c-CCCCceEEEECchhhccCC-CCcCEEEECCC--CHHHHHHHHHHHcCCCCEEEEEE
Confidence 9 986 99999999976543 46999999864 445677755 6679999998754
No 36
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.42 E-value=7.2e-13 Score=110.13 Aligned_cols=112 Identities=10% Similarity=-0.044 Sum_probs=85.5
Q ss_pred cHHHHHHHHHHHHhcCCCeEEEEccC-cchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecch
Q 027409 26 ESGVAELLSAMAAGWNAKLIVEAWTH-GGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQA 104 (223)
Q Consensus 26 ~p~~g~fL~~L~~~~~ak~ILEIGT~-~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA 104 (223)
++...++|.......+..+|||+||| +|+ .++.++... +++++.+|+++++++.|+++++.. |+.++++.||+
T Consensus 40 p~~~~~~l~~~~~~~~~~~vLDlG~G~~G~--~~~~la~~~---~~~v~~vD~s~~~~~~a~~~~~~~-~~~v~~~~~d~ 113 (230)
T 3evz_A 40 TTPISRYIFLKTFLRGGEVALEIGTGHTAM--MALMAEKFF---NCKVTATEVDEEFFEYARRNIERN-NSNVRLVKSNG 113 (230)
T ss_dssp CCHHHHHHHHHTTCCSSCEEEEECCTTTCH--HHHHHHHHH---CCEEEEEECCHHHHHHHHHHHHHT-TCCCEEEECSS
T ss_pred CCCchhhhHhHhhcCCCCEEEEcCCCHHHH--HHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHh-CCCcEEEeCCc
Confidence 33445666444445677899999999 998 777777543 579999999999999999999998 88899999997
Q ss_pred HH--HhcCCCCccEEEEeC----------------------CCcccHHHHHHh-ccCCCceEEEE
Q 027409 105 EE--VMGELKGVDFLVVDC----------------------TSKDFARVLRFA-RFSNKGAVLAF 144 (223)
Q Consensus 105 ~e--vL~~L~~fDfVFIDa----------------------~K~~Y~~~f~~~-~~l~~GgvIV~ 144 (223)
.. -++. +.||+|+.|. ..+.|..+++.+ +.|+|||.+++
T Consensus 114 ~~~~~~~~-~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 177 (230)
T 3evz_A 114 GIIKGVVE-GTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVAL 177 (230)
T ss_dssp CSSTTTCC-SCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEE
T ss_pred hhhhhccc-CceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEE
Confidence 43 2222 5799999882 122357778755 66799999887
No 37
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.42 E-value=9.9e-13 Score=108.22 Aligned_cols=116 Identities=14% Similarity=0.038 Sum_probs=92.7
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEec
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVR 102 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~G 102 (223)
+..|.....+..++......+|||||||+|+ .++.++... .+.++++.+|+++++++.|++++++. |+. ++++.+
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~--~~~~l~~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~-~~~~v~~~~~ 135 (215)
T 2yxe_A 60 ISAIHMVGMMCELLDLKPGMKVLEIGTGCGY--HAAVTAEIV-GEDGLVVSIERIPELAEKAERTLRKL-GYDNVIVIVG 135 (215)
T ss_dssp ECCHHHHHHHHHHTTCCTTCEEEEECCTTSH--HHHHHHHHH-CTTSEEEEEESCHHHHHHHHHHHHHH-TCTTEEEEES
T ss_pred eCcHHHHHHHHHhhCCCCCCEEEEECCCccH--HHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHHc-CCCCeEEEEC
Confidence 4457777777666777788899999999998 677777654 23479999999999999999999998 887 999999
Q ss_pred chHHHhcCCCCccEEEEeCCCcccHHHHHHhccCCCceEEEEe
Q 027409 103 QAEEVMGELKGVDFLVVDCTSKDFARVLRFARFSNKGAVLAFK 145 (223)
Q Consensus 103 dA~evL~~L~~fDfVFIDa~K~~Y~~~f~~~~~l~~GgvIV~D 145 (223)
|+.+.++...+||+|+++..-.+..+ +..+.++|||.+++.
T Consensus 136 d~~~~~~~~~~fD~v~~~~~~~~~~~--~~~~~L~pgG~lv~~ 176 (215)
T 2yxe_A 136 DGTLGYEPLAPYDRIYTTAAGPKIPE--PLIRQLKDGGKLLMP 176 (215)
T ss_dssp CGGGCCGGGCCEEEEEESSBBSSCCH--HHHHTEEEEEEEEEE
T ss_pred CcccCCCCCCCeeEEEECCchHHHHH--HHHHHcCCCcEEEEE
Confidence 99765543357999999987766553 344677999988875
No 38
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.41 E-value=9.3e-13 Score=117.26 Aligned_cols=102 Identities=16% Similarity=0.170 Sum_probs=83.6
Q ss_pred hcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHh--hcC-c--e-EEEEecchHHHhcCC-
Q 027409 39 GWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYD--VVG-W--V-SEVIVRQAEEVMGEL- 111 (223)
Q Consensus 39 ~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~--a~G-~--~-I~li~GdA~evL~~L- 111 (223)
..++++|||||||.|+ .+.+++. ..+..+++.+|+|++.++.|++++.. . | + . ++++.||+.+.++..
T Consensus 75 ~~~~~~VLdiG~G~G~--~~~~l~~--~~~~~~v~~vDid~~~i~~ar~~~~~~~~-~~~~~~~v~~~~~D~~~~l~~~~ 149 (314)
T 1uir_A 75 HPEPKRVLIVGGGEGA--TLREVLK--HPTVEKAVMVDIDGELVEVAKRHMPEWHQ-GAFDDPRAVLVIDDARAYLERTE 149 (314)
T ss_dssp SSCCCEEEEEECTTSH--HHHHHTT--STTCCEEEEEESCHHHHHHHHHHCHHHHT-TGGGCTTEEEEESCHHHHHHHCC
T ss_pred CCCCCeEEEEcCCcCH--HHHHHHh--cCCCCEEEEEECCHHHHHHHHHHhHhhcc-ccccCCceEEEEchHHHHHHhcC
Confidence 4588999999999998 6666653 33467999999999999999999976 3 4 3 3 999999999988754
Q ss_pred CCccEEEEeCCCcc----------cHHHHHHh-ccCCCceEEEEe
Q 027409 112 KGVDFLVVDCTSKD----------FARVLRFA-RFSNKGAVLAFK 145 (223)
Q Consensus 112 ~~fDfVFIDa~K~~----------Y~~~f~~~-~~l~~GgvIV~D 145 (223)
+.||+|++|+.... +.++|+.+ +.|+|||++++.
T Consensus 150 ~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 194 (314)
T 1uir_A 150 ERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ 194 (314)
T ss_dssp CCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred CCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEE
Confidence 47999999986544 57889866 567999999986
No 39
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.41 E-value=1.2e-12 Score=105.29 Aligned_cols=108 Identities=14% Similarity=0.100 Sum_probs=81.1
Q ss_pred HHHHHHHHh--cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEecchHHH
Q 027409 31 ELLSAMAAG--WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVRQAEEV 107 (223)
Q Consensus 31 ~fL~~L~~~--~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~GdA~ev 107 (223)
++...+++. ....+|||||||+|+ .+++||.. +++|+.+|+++++++.|++++++. |+. ++++.+++.+.
T Consensus 10 ~~~~~~l~~~~~~~~~vLDiGcG~G~--~~~~la~~----~~~v~~vD~s~~~l~~a~~~~~~~-~~~~v~~~~~~~~~l 82 (185)
T 3mti_A 10 HMSHDFLAEVLDDESIVVDATMGNGN--DTAFLAGL----SKKVYAFDVQEQALGKTSQRLSDL-GIENTELILDGHENL 82 (185)
T ss_dssp HHHHHHHHTTCCTTCEEEESCCTTSH--HHHHHHTT----SSEEEEEESCHHHHHHHHHHHHHH-TCCCEEEEESCGGGG
T ss_pred HHHHHHHHHhCCCCCEEEEEcCCCCH--HHHHHHHh----CCEEEEEECCHHHHHHHHHHHHHc-CCCcEEEEeCcHHHH
Confidence 344444443 246799999999998 78787642 789999999999999999999999 987 99999877664
Q ss_pred hcCC-CCccEEEEeC------------CCcccHHHHHHh-ccCCCceEEEEe
Q 027409 108 MGEL-KGVDFLVVDC------------TSKDFARVLRFA-RFSNKGAVLAFK 145 (223)
Q Consensus 108 L~~L-~~fDfVFIDa------------~K~~Y~~~f~~~-~~l~~GgvIV~D 145 (223)
.... ++||+|+.+. ..+.....++.+ +.|+|||.++.-
T Consensus 83 ~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 134 (185)
T 3mti_A 83 DHYVREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIM 134 (185)
T ss_dssp GGTCCSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred HhhccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEE
Confidence 3333 4799999983 123334556544 677999988774
No 40
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.41 E-value=1e-12 Score=110.53 Aligned_cols=114 Identities=11% Similarity=0.044 Sum_probs=89.7
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEec
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVR 102 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~G 102 (223)
+..|.....+..++......+|||||||+|+ .++.++.... ++++++|++++.++.|+++++.. |+. ++++.|
T Consensus 74 ~~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~--~~~~la~~~~---~~v~~vD~~~~~~~~a~~~~~~~-~~~~v~~~~~ 147 (235)
T 1jg1_A 74 VSAPHMVAIMLEIANLKPGMNILEVGTGSGW--NAALISEIVK---TDVYTIERIPELVEFAKRNLERA-GVKNVHVILG 147 (235)
T ss_dssp ECCHHHHHHHHHHHTCCTTCCEEEECCTTSH--HHHHHHHHHC---SCEEEEESCHHHHHHHHHHHHHT-TCCSEEEEES
T ss_pred eccHHHHHHHHHhcCCCCCCEEEEEeCCcCH--HHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHHc-CCCCcEEEEC
Confidence 3456666666666677788899999999998 7777775432 78999999999999999999998 987 999999
Q ss_pred chHHHhcCCCCccEEEEeCCCcccHHHHHHhccCCCceEEEEe
Q 027409 103 QAEEVMGELKGVDFLVVDCTSKDFARVLRFARFSNKGAVLAFK 145 (223)
Q Consensus 103 dA~evL~~L~~fDfVFIDa~K~~Y~~~f~~~~~l~~GgvIV~D 145 (223)
|+...++.-.+||+|++++......+ +..+.++|||.+++.
T Consensus 148 d~~~~~~~~~~fD~Ii~~~~~~~~~~--~~~~~L~pgG~lvi~ 188 (235)
T 1jg1_A 148 DGSKGFPPKAPYDVIIVTAGAPKIPE--PLIEQLKIGGKLIIP 188 (235)
T ss_dssp CGGGCCGGGCCEEEEEECSBBSSCCH--HHHHTEEEEEEEEEE
T ss_pred CcccCCCCCCCccEEEECCcHHHHHH--HHHHhcCCCcEEEEE
Confidence 99444443346999999987766554 345677899988764
No 41
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.40 E-value=1.1e-12 Score=118.40 Aligned_cols=103 Identities=12% Similarity=-0.008 Sum_probs=83.8
Q ss_pred cCCC--eEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEecchHHHhcCC--CCc
Q 027409 40 WNAK--LIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVRQAEEVMGEL--KGV 114 (223)
Q Consensus 40 ~~ak--~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~GdA~evL~~L--~~f 114 (223)
-+++ +||+||||.|+ .+.+++.. .++.+|+.+|+|++.++.||++|... ... ++++.|||.+.+..+ +.|
T Consensus 86 p~p~~~rVLdIG~G~G~--la~~la~~--~p~~~v~~VEidp~vi~~Ar~~~~~~-~~~rv~v~~~Da~~~l~~~~~~~f 160 (317)
T 3gjy_A 86 QDASKLRITHLGGGACT--MARYFADV--YPQSRNTVVELDAELARLSREWFDIP-RAPRVKIRVDDARMVAESFTPASR 160 (317)
T ss_dssp SCGGGCEEEEESCGGGH--HHHHHHHH--STTCEEEEEESCHHHHHHHHHHSCCC-CTTTEEEEESCHHHHHHTCCTTCE
T ss_pred CCCCCCEEEEEECCcCH--HHHHHHHH--CCCcEEEEEECCHHHHHHHHHhcccc-CCCceEEEECcHHHHHhhccCCCC
Confidence 3555 99999999998 77777643 24679999999999999999999764 444 999999999999876 479
Q ss_pred cEEEEeCCCccc-------HHHHHHh-ccCCCceEEEEeCC
Q 027409 115 DFLVVDCTSKDF-------ARVLRFA-RFSNKGAVLAFKNA 147 (223)
Q Consensus 115 DfVFIDa~K~~Y-------~~~f~~~-~~l~~GgvIV~DNv 147 (223)
|+||+|+....+ .++|+.+ +.|++||+++++..
T Consensus 161 DvIi~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 161 DVIIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp EEEEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 999999865433 6788866 56799999998764
No 42
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.39 E-value=2.9e-12 Score=102.35 Aligned_cols=101 Identities=13% Similarity=0.196 Sum_probs=82.0
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCC----CC
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGEL----KG 113 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L----~~ 113 (223)
...++|||+|||+|+ .+++++. . ..++++.+|.++++++.|+++++.. |+. ++++.||+.+.++.+ +.
T Consensus 43 ~~~~~vLD~GcG~G~--~~~~~~~--~-~~~~v~~vD~~~~~~~~a~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~ 116 (187)
T 2fhp_A 43 FDGGMALDLYSGSGG--LAIEAVS--R-GMDKSICIEKNFAALKVIKENIAIT-KEPEKFEVRKMDANRALEQFYEEKLQ 116 (187)
T ss_dssp CSSCEEEETTCTTCH--HHHHHHH--T-TCSEEEEEESCHHHHHHHHHHHHHH-TCGGGEEEEESCHHHHHHHHHHTTCC
T ss_pred cCCCCEEEeCCccCH--HHHHHHH--c-CCCEEEEEECCHHHHHHHHHHHHHh-CCCcceEEEECcHHHHHHHHHhcCCC
Confidence 467899999999998 6666653 2 3479999999999999999999999 985 999999999977542 47
Q ss_pred ccEEEEeCC--CcccHHHHHHh---ccCCCceEEEEeC
Q 027409 114 VDFLVVDCT--SKDFARVLRFA---RFSNKGAVLAFKN 146 (223)
Q Consensus 114 fDfVFIDa~--K~~Y~~~f~~~---~~l~~GgvIV~DN 146 (223)
||+||.|.. .....+.+..+ +.|+|||++++..
T Consensus 117 fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~ 154 (187)
T 2fhp_A 117 FDLVLLDPPYAKQEIVSQLEKMLERQLLTNEAVIVCET 154 (187)
T ss_dssp EEEEEECCCGGGCCHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred CCEEEECCCCCchhHHHHHHHHHHhcccCCCCEEEEEe
Confidence 999999975 45566777654 5579999998764
No 43
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.38 E-value=1.9e-12 Score=107.56 Aligned_cols=116 Identities=10% Similarity=0.053 Sum_probs=87.8
Q ss_pred CCcHHHHHHH-HHHH-HhcCCCeEEEEccCcchHHHHHHHHHhcC---CCCcEEEEEeCCchHHHHHHHHHHhhcC----
Q 027409 24 IKESGVAELL-SAMA-AGWNAKLIVEAWTHGGPITTSIGLAIAAR---HTCARHVCIVPDERSRLAYVKAMYDVVG---- 94 (223)
Q Consensus 24 ii~p~~g~fL-~~L~-~~~~ak~ILEIGT~~Gys~Stl~la~A~~---~~~g~i~TIE~d~e~~~~Ar~~~~~a~G---- 94 (223)
+..|.....+ ..|. ......+|||||||+|+ .+++++.... .++++++++|+++++++.|++++++. |
T Consensus 61 ~~~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~--~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-~~~~~ 137 (227)
T 2pbf_A 61 ISAPHMHALSLKRLINVLKPGSRAIDVGSGSGY--LTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRD-KPELL 137 (227)
T ss_dssp ECCHHHHHHHHHHHTTTSCTTCEEEEESCTTSH--HHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHH-CGGGG
T ss_pred cCChHHHHHHHHHHHhhCCCCCEEEEECCCCCH--HHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHc-Ccccc
Confidence 4456655444 4443 35567899999999998 7777776532 14579999999999999999999998 8
Q ss_pred -ce-EEEEecchHHHh----cCCCCccEEEEeCCCcccHHHHHH-hccCCCceEEEEe
Q 027409 95 -WV-SEVIVRQAEEVM----GELKGVDFLVVDCTSKDFARVLRF-ARFSNKGAVLAFK 145 (223)
Q Consensus 95 -~~-I~li~GdA~evL----~~L~~fDfVFIDa~K~~Y~~~f~~-~~~l~~GgvIV~D 145 (223)
.. ++++.||+.+.+ ....+||+|++++...+.. +. .+.|+|||.+++.
T Consensus 138 ~~~~v~~~~~d~~~~~~~~~~~~~~fD~I~~~~~~~~~~---~~~~~~LkpgG~lv~~ 192 (227)
T 2pbf_A 138 KIDNFKIIHKNIYQVNEEEKKELGLFDAIHVGASASELP---EILVDLLAENGKLIIP 192 (227)
T ss_dssp SSTTEEEEECCGGGCCHHHHHHHCCEEEEEECSBBSSCC---HHHHHHEEEEEEEEEE
T ss_pred ccCCEEEEECChHhcccccCccCCCcCEEEECCchHHHH---HHHHHhcCCCcEEEEE
Confidence 44 999999998854 3235799999999876543 43 3567899998875
No 44
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.38 E-value=2e-12 Score=113.09 Aligned_cols=103 Identities=10% Similarity=-0.014 Sum_probs=82.1
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhh-cCc--e-EEEEecchHHHhcCC-CCc
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDV-VGW--V-SEVIVRQAEEVMGEL-KGV 114 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a-~G~--~-I~li~GdA~evL~~L-~~f 114 (223)
.++++||+||||.|+ .+.+++. ..+..+|+.+|+|++.++.||+++... .++ . ++++.|||.+.|+.. +.|
T Consensus 74 ~~~~~VLdiG~G~G~--~~~~l~~--~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~f 149 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGG--VIREILK--HPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQY 149 (275)
T ss_dssp SSCCEEEEESCTTCH--HHHHHTT--CTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCE
T ss_pred CCCCEEEEECCchHH--HHHHHHh--CCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCe
Confidence 478999999999997 6656542 334579999999999999999999752 023 3 999999999988765 479
Q ss_pred cEEEEeCCCccc-------HHHHHHh-ccCCCceEEEEeC
Q 027409 115 DFLVVDCTSKDF-------ARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 115 DfVFIDa~K~~Y-------~~~f~~~-~~l~~GgvIV~DN 146 (223)
|+||+|+....+ .++|+.+ +.|+|||++++..
T Consensus 150 D~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 150 DVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp EEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred eEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 999999864322 5788766 5679999999984
No 45
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.37 E-value=1.1e-11 Score=106.80 Aligned_cols=98 Identities=13% Similarity=0.093 Sum_probs=82.8
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEecchHHHhcC--C-CCccE
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVRQAEEVMGE--L-KGVDF 116 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~GdA~evL~~--L-~~fDf 116 (223)
...+|||||||+|+ .++.||... ++++|+.+|+++++++.|+++.++. |+. |+++.||+.+.... . +.||+
T Consensus 80 ~~~~vLDiG~G~G~--~~i~la~~~--~~~~v~~vD~s~~~~~~a~~~~~~~-~l~~v~~~~~d~~~~~~~~~~~~~fD~ 154 (249)
T 3g89_A 80 GPLRVLDLGTGAGF--PGLPLKIVR--PELELVLVDATRKKVAFVERAIEVL-GLKGARALWGRAEVLAREAGHREAYAR 154 (249)
T ss_dssp SSCEEEEETCTTTT--THHHHHHHC--TTCEEEEEESCHHHHHHHHHHHHHH-TCSSEEEEECCHHHHTTSTTTTTCEEE
T ss_pred CCCEEEEEcCCCCH--HHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHh-CCCceEEEECcHHHhhcccccCCCceE
Confidence 57899999999999 777777543 4689999999999999999999999 998 99999999887653 2 48999
Q ss_pred EEEeCCCcccHHHHHHh-ccCCCceEEEE
Q 027409 117 LVVDCTSKDFARVLRFA-RFSNKGAVLAF 144 (223)
Q Consensus 117 VFIDa~K~~Y~~~f~~~-~~l~~GgvIV~ 144 (223)
|+..+- ..+..+++.+ +.++|||.+++
T Consensus 155 I~s~a~-~~~~~ll~~~~~~LkpgG~l~~ 182 (249)
T 3g89_A 155 AVARAV-APLCVLSELLLPFLEVGGAAVA 182 (249)
T ss_dssp EEEESS-CCHHHHHHHHGGGEEEEEEEEE
T ss_pred EEECCc-CCHHHHHHHHHHHcCCCeEEEE
Confidence 999985 4678888866 56699998775
No 46
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.37 E-value=1.9e-12 Score=113.28 Aligned_cols=141 Identities=12% Similarity=0.070 Sum_probs=96.4
Q ss_pred HhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhh-cCc---------e-EEEEecchHH
Q 027409 38 AGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDV-VGW---------V-SEVIVRQAEE 106 (223)
Q Consensus 38 ~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a-~G~---------~-I~li~GdA~e 106 (223)
...++++|||||||.|+ .+.+++. . +.++|+.+|+|++.++.|++++ +. -++ . ++++.|||.+
T Consensus 72 ~~~~~~~VLdiG~G~G~--~~~~l~~--~-~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~ 145 (281)
T 1mjf_A 72 AHPKPKRVLVIGGGDGG--TVREVLQ--H-DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFE 145 (281)
T ss_dssp HSSCCCEEEEEECTTSH--HHHHHTT--S-CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHH
T ss_pred hCCCCCeEEEEcCCcCH--HHHHHHh--C-CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHH
Confidence 34688999999999998 6767653 2 4579999999999999999999 32 022 2 9999999999
Q ss_pred HhcCCCCccEEEEeCC------Ccc-cHHHHHHh-ccCCCceEEEEeC--CCCCCccccc-ccccccccc--CCCceEEE
Q 027409 107 VMGELKGVDFLVVDCT------SKD-FARVLRFA-RFSNKGAVLAFKN--AFQRSTSGLR-WQGQGVLDR--GTRVVRSV 173 (223)
Q Consensus 107 vL~~L~~fDfVFIDa~------K~~-Y~~~f~~~-~~l~~GgvIV~DN--vl~~g~~~~~-~~~r~~v~~--~~~~~~t~ 173 (223)
.++.-+.||+||+|+. +.. +.++|+.+ +.|+|||+++++. .+.... ... ... .++. ....+.++
T Consensus 146 ~l~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~-~~~~~~~--~l~~~f~~v~~~~~ 222 (281)
T 1mjf_A 146 FIKNNRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTD-ELISAYK--EMKKVFDRVYYYSF 222 (281)
T ss_dssp HHHHCCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHH-HHHHHHH--HHHHHCSEEEEEEE
T ss_pred HhcccCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHH-HHHHHHH--HHHHHCCceEEEEE
Confidence 8765237999999986 233 57888766 5679999999974 222111 000 000 1111 12235667
Q ss_pred EeecCCc---eEEEEEc
Q 027409 174 FLPVGQG---LDIVHVG 187 (223)
Q Consensus 174 lLPiGDG---l~vs~k~ 187 (223)
.+|.++| +.++.+.
T Consensus 223 ~vP~~~g~~~~~~as~~ 239 (281)
T 1mjf_A 223 PVIGYASPWAFLVGVKG 239 (281)
T ss_dssp CCTTSSSSEEEEEEEES
T ss_pred ecCCCCceEEEEEeeCC
Confidence 7899887 4555554
No 47
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.37 E-value=4.3e-12 Score=112.59 Aligned_cols=129 Identities=16% Similarity=0.122 Sum_probs=97.5
Q ss_pred HHHHHHHhhcccCCCCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHH
Q 027409 10 ASKAYIDTVKSCENIKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAM 89 (223)
Q Consensus 10 a~~ayl~~l~~~~~ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~ 89 (223)
+-..|...+..+..++.|...+++..++......+|||||||.|+ .++.++... .+.++|+++|+++++++.|++++
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~g~~VLDiG~G~G~--~~~~la~~~-g~~~~v~~vD~~~~~~~~a~~~~ 150 (336)
T 2b25_A 74 ALEDYVVLMKRGTAITFPKDINMILSMMDINPGDTVLEAGSGSGG--MSLFLSKAV-GSQGRVISFEVRKDHHDLAKKNY 150 (336)
T ss_dssp CHHHHHHHSCCSSCCCCHHHHHHHHHHHTCCTTCEEEEECCTTSH--HHHHHHHHH-CTTCEEEEEESSHHHHHHHHHHH
T ss_pred CHHHHhhhhcCCCcccCHHHHHHHHHhcCCCCCCEEEEeCCCcCH--HHHHHHHHh-CCCceEEEEeCCHHHHHHHHHHH
Confidence 345677777666667888866666666677788899999999998 777777643 34589999999999999999999
Q ss_pred HhhcC----------c-e-EEEEecchHHHhcCC--CCccEEEEeCCCcccHHHHHHh-ccCCCceEEEE
Q 027409 90 YDVVG----------W-V-SEVIVRQAEEVMGEL--KGVDFLVVDCTSKDFARVLRFA-RFSNKGAVLAF 144 (223)
Q Consensus 90 ~~a~G----------~-~-I~li~GdA~evL~~L--~~fDfVFIDa~K~~Y~~~f~~~-~~l~~GgvIV~ 144 (223)
++. | . . |+++.||+.+.+..+ +.||+||+|.. .+..+++.+ +.|+|||.+++
T Consensus 151 ~~~-~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~--~~~~~l~~~~~~LkpgG~lv~ 217 (336)
T 2b25_A 151 KHW-RDSWKLSHVEEWPDNVDFIHKDISGATEDIKSLTFDAVALDML--NPHVTLPVFYPHLKHGGVCAV 217 (336)
T ss_dssp HHH-HHHHTTTCSSCCCCCEEEEESCTTCCC-------EEEEEECSS--STTTTHHHHGGGEEEEEEEEE
T ss_pred HHh-hcccccccccccCCceEEEECChHHcccccCCCCeeEEEECCC--CHHHHHHHHHHhcCCCcEEEE
Confidence 975 5 2 3 999999998876555 36999999874 334467654 67799999985
No 48
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.35 E-value=3.5e-12 Score=103.59 Aligned_cols=103 Identities=13% Similarity=0.095 Sum_probs=81.7
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCC-CCccE
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGEL-KGVDF 116 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L-~~fDf 116 (223)
....+|||+|||+|+ .+++++.... +.++++.+|+++++++.|++++++. |+. ++++.+|+.+..... +.||+
T Consensus 21 ~~~~~vLDlGcG~G~--~~~~l~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~v~~~~~d~~~~~~~~~~~fD~ 96 (197)
T 3eey_A 21 KEGDTVVDATCGNGN--DTAFLASLVG-ENGRVFGFDIQDKAIANTTKKLTDL-NLIDRVTLIKDGHQNMDKYIDCPVKA 96 (197)
T ss_dssp CTTCEEEESCCTTSH--HHHHHHHHHC-TTCEEEEECSCHHHHHHHHHHHHHT-TCGGGEEEECSCGGGGGGTCCSCEEE
T ss_pred CCCCEEEEcCCCCCH--HHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHc-CCCCCeEEEECCHHHHhhhccCCceE
Confidence 445799999999998 7777776542 3579999999999999999999998 984 999999998865444 47999
Q ss_pred EEEeCC------------CcccHHHHHHh-ccCCCceEEEEeC
Q 027409 117 LVVDCT------------SKDFARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 117 VFIDa~------------K~~Y~~~f~~~-~~l~~GgvIV~DN 146 (223)
|+.|.. .+.+.++++.+ +.++|||.++.-.
T Consensus 97 v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 139 (197)
T 3eey_A 97 VMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVI 139 (197)
T ss_dssp EEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEE
Confidence 999862 12345677654 6779999887653
No 49
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.35 E-value=1.9e-12 Score=104.99 Aligned_cols=118 Identities=11% Similarity=0.051 Sum_probs=73.1
Q ss_pred CCcHHHHHHHHHHHHh----cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEE
Q 027409 24 IKESGVAELLSAMAAG----WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEV 99 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~----~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~l 99 (223)
+-.|++..++..++.. .+..+|||+|||+|. .+++++.. .++++++.+|+++++++.|+++++.. |..+++
T Consensus 9 ~p~~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~--~~~~l~~~--~~~~~v~~vD~~~~~~~~a~~~~~~~-~~~~~~ 83 (215)
T 4dzr_A 9 IPRPDTEVLVEEAIRFLKRMPSGTRVIDVGTGSGC--IAVSIALA--CPGVSVTAVDLSMDALAVARRNAERF-GAVVDW 83 (215)
T ss_dssp SCCHHHHHHHHHHHHHHTTCCTTEEEEEEESSBCH--HHHHHHHH--CTTEEEEEEECC--------------------C
T ss_pred CCCccHHHHHHHHHHHhhhcCCCCEEEEecCCHhH--HHHHHHHh--CCCCeEEEEECCHHHHHHHHHHHHHh-CCceEE
Confidence 3456777777777665 577899999999998 77777654 24679999999999999999999998 778999
Q ss_pred EecchHHHhcC----CCCccEEEEeCC-----------------------------CcccHHHHHHh-ccCCCceE-EEE
Q 027409 100 IVRQAEEVMGE----LKGVDFLVVDCT-----------------------------SKDFARVLRFA-RFSNKGAV-LAF 144 (223)
Q Consensus 100 i~GdA~evL~~----L~~fDfVFIDa~-----------------------------K~~Y~~~f~~~-~~l~~Ggv-IV~ 144 (223)
+.+|+.+.++. .+.||+|+.|.- .+.|..+++.+ +.|+|||. ++.
T Consensus 84 ~~~d~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 163 (215)
T 4dzr_A 84 AAADGIEWLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFL 163 (215)
T ss_dssp CHHHHHHHHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEE
T ss_pred EEcchHhhhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 99999997764 258999999621 11135666644 66799999 666
Q ss_pred eC
Q 027409 145 KN 146 (223)
Q Consensus 145 DN 146 (223)
.-
T Consensus 164 ~~ 165 (215)
T 4dzr_A 164 EV 165 (215)
T ss_dssp EC
T ss_pred EE
Confidence 54
No 50
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.34 E-value=8.8e-12 Score=107.43 Aligned_cols=129 Identities=18% Similarity=0.101 Sum_probs=98.2
Q ss_pred HHHHHHhhcccCCCCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHH
Q 027409 11 SKAYIDTVKSCENIKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMY 90 (223)
Q Consensus 11 ~~ayl~~l~~~~~ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~ 90 (223)
+..|...+.....++.|....++...+......+|||+|||.|. .++.++... .++++++++|.+++.++.|+++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~VLDiG~G~G~--~~~~la~~~-~~~~~v~~vD~s~~~~~~a~~~~~ 158 (277)
T 1o54_A 82 LIDEIMNMKRRTQIVYPKDSSFIAMMLDVKEGDRIIDTGVGSGA--MCAVLARAV-GSSGKVFAYEKREEFAKLAESNLT 158 (277)
T ss_dssp HHHHHHTCCC-CCCCCHHHHHHHHHHTTCCTTCEEEEECCTTSH--HHHHHHHHT-TTTCEEEEECCCHHHHHHHHHHHH
T ss_pred HHHHHhhccccCCccCHHHHHHHHHHhCCCCCCEEEEECCcCCH--HHHHHHHHh-CCCcEEEEEECCHHHHHHHHHHHH
Confidence 34555555444456777776766666677778899999999998 777777543 346899999999999999999999
Q ss_pred hhcCce--EEEEecchHHHhcCCCCccEEEEeCCCcccHHHHHHh-ccCCCceEEEEeC
Q 027409 91 DVVGWV--SEVIVRQAEEVMGELKGVDFLVVDCTSKDFARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 91 ~a~G~~--I~li~GdA~evL~~L~~fDfVFIDa~K~~Y~~~f~~~-~~l~~GgvIV~DN 146 (223)
+. |+. ++++.+|+.+.++. +.||+||+|.. .-..+++.+ +.|+|||.+++-.
T Consensus 159 ~~-~~~~~v~~~~~d~~~~~~~-~~~D~V~~~~~--~~~~~l~~~~~~L~pgG~l~~~~ 213 (277)
T 1o54_A 159 KW-GLIERVTIKVRDISEGFDE-KDVDALFLDVP--DPWNYIDKCWEALKGGGRFATVC 213 (277)
T ss_dssp HT-TCGGGEEEECCCGGGCCSC-CSEEEEEECCS--CGGGTHHHHHHHEEEEEEEEEEE
T ss_pred Hc-CCCCCEEEEECCHHHcccC-CccCEEEECCc--CHHHHHHHHHHHcCCCCEEEEEe
Confidence 98 983 99999999887443 47999999863 334677654 5678999887644
No 51
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.34 E-value=9.6e-12 Score=101.49 Aligned_cols=98 Identities=10% Similarity=0.057 Sum_probs=81.7
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEecchHHHhcCCCCccEEEE
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVRQAEEVMGELKGVDFLVV 119 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~GdA~evL~~L~~fDfVFI 119 (223)
+..+|||||||+|+ .++.++... ++++++.+|.++++++.|+++++.. |+. ++++.+|+.+..+ -+.||+|+.
T Consensus 65 ~~~~vLDiG~G~G~--~~~~l~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~v~~~~~d~~~~~~-~~~~D~i~~ 138 (207)
T 1jsx_A 65 QGERFIDVGTGPGL--PGIPLSIVR--PEAHFTLLDSLGKRVRFLRQVQHEL-KLENIEPVQSRVEEFPS-EPPFDGVIS 138 (207)
T ss_dssp CSSEEEEETCTTTT--THHHHHHHC--TTSEEEEEESCHHHHHHHHHHHHHT-TCSSEEEEECCTTTSCC-CSCEEEEEC
T ss_pred CCCeEEEECCCCCH--HHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHHHHc-CCCCeEEEecchhhCCc-cCCcCEEEE
Confidence 36899999999998 676776542 4689999999999999999999998 988 9999999987543 257999998
Q ss_pred eCCCcccHHHHHHh-ccCCCceEEEEe
Q 027409 120 DCTSKDFARVLRFA-RFSNKGAVLAFK 145 (223)
Q Consensus 120 Da~K~~Y~~~f~~~-~~l~~GgvIV~D 145 (223)
.+ -..+..+++.+ +.++|||.+++-
T Consensus 139 ~~-~~~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 139 RA-FASLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp SC-SSSHHHHHHHHTTSEEEEEEEEEE
T ss_pred ec-cCCHHHHHHHHHHhcCCCcEEEEE
Confidence 76 46788888866 566999998875
No 52
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.34 E-value=5.7e-12 Score=111.30 Aligned_cols=103 Identities=14% Similarity=0.131 Sum_probs=81.2
Q ss_pred hcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHh--hcCc--e-EEEEecchHHHhcCC-C
Q 027409 39 GWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYD--VVGW--V-SEVIVRQAEEVMGEL-K 112 (223)
Q Consensus 39 ~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~--a~G~--~-I~li~GdA~evL~~L-~ 112 (223)
..++++|||||||.|. .+..++. ..+.++|+.+|+|++.++.|++++.+ . ++ . ++++.||+.+.++.. +
T Consensus 88 ~~~~~~VLdiG~G~G~--~~~~l~~--~~~~~~v~~vDid~~~~~~a~~~~~~~~~-~~~~~~v~~~~~D~~~~l~~~~~ 162 (296)
T 1inl_A 88 HPNPKKVLIIGGGDGG--TLREVLK--HDSVEKAILCEVDGLVIEAARKYLKQTSC-GFDDPRAEIVIANGAEYVRKFKN 162 (296)
T ss_dssp SSSCCEEEEEECTTCH--HHHHHTT--STTCSEEEEEESCHHHHHHHHHHCHHHHG-GGGCTTEEEEESCHHHHGGGCSS
T ss_pred CCCCCEEEEEcCCcCH--HHHHHHh--cCCCCEEEEEECCHHHHHHHHHHhHhhcc-ccCCCceEEEECcHHHHHhhCCC
Confidence 3578999999999997 6666642 33468999999999999999999975 3 33 3 999999999988765 4
Q ss_pred CccEEEEeCCCc--------ccHHHHHHh-ccCCCceEEEEeC
Q 027409 113 GVDFLVVDCTSK--------DFARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 113 ~fDfVFIDa~K~--------~Y~~~f~~~-~~l~~GgvIV~DN 146 (223)
.||+|++|+.-. .+.++|+.+ +.|+|||++++..
T Consensus 163 ~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 163 EFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp CEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred CceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 799999998543 347888766 5679999999973
No 53
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.34 E-value=5.2e-12 Score=110.78 Aligned_cols=102 Identities=11% Similarity=0.051 Sum_probs=81.7
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcC--c--e-EEEEecchHHHhcCC-CC
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVG--W--V-SEVIVRQAEEVMGEL-KG 113 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G--~--~-I~li~GdA~evL~~L-~~ 113 (223)
.++++|||||||.|. .+..++. ..+..+++.+|+|++.++.|++++... + + . ++++.||+.+.++.. +.
T Consensus 77 ~~~~~VLdiG~G~G~--~~~~l~~--~~~~~~v~~vDid~~~i~~a~~~~~~~-~~~~~~~~v~~~~~D~~~~l~~~~~~ 151 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGG--IIRELCK--YKSVENIDICEIDETVIEVSKIYFKNI-SCGYEDKRVNVFIEDASKFLENVTNT 151 (283)
T ss_dssp SSCCEEEEEECTTSH--HHHHHTT--CTTCCEEEEEESCHHHHHHHHHHCTTT-SGGGGSTTEEEEESCHHHHHHHCCSC
T ss_pred CCCCeEEEEeCCcCH--HHHHHHH--cCCCCEEEEEECCHHHHHHHHHHhHHh-ccccCCCcEEEEECChHHHHHhCCCC
Confidence 478999999999997 5555542 334689999999999999999999764 3 2 3 999999999988754 47
Q ss_pred ccEEEEeCC------Cccc-HHHHHHh-ccCCCceEEEEeC
Q 027409 114 VDFLVVDCT------SKDF-ARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 114 fDfVFIDa~------K~~Y-~~~f~~~-~~l~~GgvIV~DN 146 (223)
||+|++|+. ...| .++|+.+ +.|+|||++++..
T Consensus 152 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 152 YDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp EEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred ceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 999999983 2334 6888866 5679999999874
No 54
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.33 E-value=5.7e-12 Score=105.83 Aligned_cols=112 Identities=16% Similarity=0.057 Sum_probs=83.9
Q ss_pred HHHHHHHHHh--cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHH
Q 027409 30 AELLSAMAAG--WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEV 107 (223)
Q Consensus 30 g~fL~~L~~~--~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~ev 107 (223)
..++..+++. ....+|||||||+|+ .+++++. . ...+++.+|+++++++.|+++.++. |..++++.||+.+.
T Consensus 47 ~~~~~~l~~~~~~~~~~vLDiGcGtG~--~~~~l~~--~-~~~~v~gvD~s~~~l~~a~~~~~~~-~~~v~~~~~d~~~~ 120 (236)
T 1zx0_A 47 TPYMHALAAAASSKGGRVLEVGFGMAI--AASKVQE--A-PIDEHWIIECNDGVFQRLRDWAPRQ-THKVIPLKGLWEDV 120 (236)
T ss_dssp HHHHHHHHHHHTTTCEEEEEECCTTSH--HHHHHHT--S-CEEEEEEEECCHHHHHHHHHHGGGC-SSEEEEEESCHHHH
T ss_pred HHHHHHHHhhcCCCCCeEEEEeccCCH--HHHHHHh--c-CCCeEEEEcCCHHHHHHHHHHHHhc-CCCeEEEecCHHHh
Confidence 3445555444 456799999999998 6767642 2 2348999999999999999999988 86699999999998
Q ss_pred hcCC--CCccEEEEeCCCcc--------cHHHHHHh-ccCCCceEEEEeCC
Q 027409 108 MGEL--KGVDFLVVDCTSKD--------FARVLRFA-RFSNKGAVLAFKNA 147 (223)
Q Consensus 108 L~~L--~~fDfVFIDa~K~~--------Y~~~f~~~-~~l~~GgvIV~DNv 147 (223)
++.+ +.||+|+.|..... ...++..+ +.|+|||++++-|.
T Consensus 121 ~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 171 (236)
T 1zx0_A 121 APTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp GGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred hcccCCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEec
Confidence 6655 47999999654321 22446544 67899999997664
No 55
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.33 E-value=8.4e-12 Score=98.08 Aligned_cols=99 Identities=11% Similarity=0.130 Sum_probs=80.1
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC----CCccE
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL----KGVDF 116 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L----~~fDf 116 (223)
+.++|||+|||+|. .+++++.. +.+++.+|.++++++.|+++++.. ++.++++.+|+.+.++.+ +.||+
T Consensus 41 ~~~~vLD~GcG~G~--~~~~l~~~----~~~v~~vD~~~~~~~~a~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~D~ 113 (171)
T 1ws6_A 41 RRGRFLDPFAGSGA--VGLEAASE----GWEAVLVEKDPEAVRLLKENVRRT-GLGARVVALPVEVFLPEAKAQGERFTV 113 (171)
T ss_dssp TCCEEEEETCSSCH--HHHHHHHT----TCEEEEECCCHHHHHHHHHHHHHH-TCCCEEECSCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeCCCcCH--HHHHHHHC----CCeEEEEeCCHHHHHHHHHHHHHc-CCceEEEeccHHHHHHhhhccCCceEE
Confidence 77899999999998 67777643 335999999999999999999998 878999999999977644 26999
Q ss_pred EEEeCCC-cccHHHHHHh---ccCCCceEEEEeC
Q 027409 117 LVVDCTS-KDFARVLRFA---RFSNKGAVLAFKN 146 (223)
Q Consensus 117 VFIDa~K-~~Y~~~f~~~---~~l~~GgvIV~DN 146 (223)
|+.|..- ....+.++.+ +.++|||++++..
T Consensus 114 i~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~~ 147 (171)
T 1ws6_A 114 AFMAPPYAMDLAALFGELLASGLVEAGGLYVLQH 147 (171)
T ss_dssp EEECCCTTSCTTHHHHHHHHHTCEEEEEEEEEEE
T ss_pred EEECCCCchhHHHHHHHHHhhcccCCCcEEEEEe
Confidence 9999532 5566777654 5579999988754
No 56
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.33 E-value=8.1e-12 Score=108.60 Aligned_cols=104 Identities=11% Similarity=0.095 Sum_probs=80.3
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCCCCccEEE
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGELKGVDFLV 118 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L~~fDfVF 118 (223)
.-.+|||||||+|. .++.||.....++.+|+.||+++++++.||++++.. +.. |+++.||+.+. + +++||+|+
T Consensus 70 ~~~~vLDlGcGtG~--~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~-~~~~~v~~~~~D~~~~-~-~~~~d~v~ 144 (261)
T 4gek_A 70 PGTQVYDLGCSLGA--ATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAY-KAPTPVDVIEGDIRDI-A-IENASMVV 144 (261)
T ss_dssp TTCEEEEETCTTTH--HHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTS-CCSSCEEEEESCTTTC-C-CCSEEEEE
T ss_pred CCCEEEEEeCCCCH--HHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhh-ccCceEEEeecccccc-c-ccccccce
Confidence 44699999999998 788888766667789999999999999999999998 776 99999998763 2 35799998
Q ss_pred EeCCC-----cccHHHHHHh-ccCCCceEEEE-eCCCC
Q 027409 119 VDCTS-----KDFARVLRFA-RFSNKGAVLAF-KNAFQ 149 (223)
Q Consensus 119 IDa~K-----~~Y~~~f~~~-~~l~~GgvIV~-DNvl~ 149 (223)
.-..- .+...+|..+ +.|+|||++|. |.+..
T Consensus 145 ~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~ 182 (261)
T 4gek_A 145 LNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSF 182 (261)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCC
T ss_pred eeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCC
Confidence 75432 2224566644 67899997665 44443
No 57
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.33 E-value=6.4e-12 Score=102.80 Aligned_cols=114 Identities=9% Similarity=0.001 Sum_probs=90.3
Q ss_pred cHHHHHHHHHHHHh-cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEecc
Q 027409 26 ESGVAELLSAMAAG-WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVRQ 103 (223)
Q Consensus 26 ~p~~g~fL~~L~~~-~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~Gd 103 (223)
.|....++..+... .+.++|||||||+|+ .++.++. . ..++++.+|.++++++.|+++++.. |+. ++++.+|
T Consensus 44 ~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~--~~~~l~~--~-~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~v~~~~~d 117 (205)
T 3grz_A 44 HQTTQLAMLGIERAMVKPLTVADVGTGSGI--LAIAAHK--L-GAKSVLATDISDESMTAAEENAALN-GIYDIALQKTS 117 (205)
T ss_dssp HHHHHHHHHHHHHHCSSCCEEEEETCTTSH--HHHHHHH--T-TCSEEEEEESCHHHHHHHHHHHHHT-TCCCCEEEESS
T ss_pred CccHHHHHHHHHHhccCCCEEEEECCCCCH--HHHHHHH--C-CCCEEEEEECCHHHHHHHHHHHHHc-CCCceEEEecc
Confidence 34455566666654 456899999999998 6767664 2 3469999999999999999999998 988 9999999
Q ss_pred hHHHhcCCCCccEEEEeCCCcccHHHHHHh-ccCCCceEEEEeCC
Q 027409 104 AEEVMGELKGVDFLVVDCTSKDFARVLRFA-RFSNKGAVLAFKNA 147 (223)
Q Consensus 104 A~evL~~L~~fDfVFIDa~K~~Y~~~f~~~-~~l~~GgvIV~DNv 147 (223)
+.+.++ +.||+|+.+..-..+..+++.+ +.++|||.++....
T Consensus 118 ~~~~~~--~~fD~i~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 160 (205)
T 3grz_A 118 LLADVD--GKFDLIVANILAEILLDLIPQLDSHLNEDGQVIFSGI 160 (205)
T ss_dssp TTTTCC--SCEEEEEEESCHHHHHHHGGGSGGGEEEEEEEEEEEE
T ss_pred ccccCC--CCceEEEECCcHHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 977543 5899999998777777777655 56799999988544
No 58
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.33 E-value=5.8e-12 Score=106.41 Aligned_cols=99 Identities=13% Similarity=0.104 Sum_probs=80.6
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEecchHHHhcC-C--CCccE
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVRQAEEVMGE-L--KGVDF 116 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~GdA~evL~~-L--~~fDf 116 (223)
...+|||||||+|. +++.||.. .++..++.||+++++++.|+++.++. |+. |+++.|||.+.++. + +.||.
T Consensus 34 ~~~~vLDiGcG~G~--~~~~lA~~--~p~~~v~giD~s~~~l~~a~~~~~~~-~l~nv~~~~~Da~~~l~~~~~~~~~d~ 108 (218)
T 3dxy_A 34 EAPVTLEIGFGMGA--SLVAMAKD--RPEQDFLGIEVHSPGVGACLASAHEE-GLSNLRVMCHDAVEVLHKMIPDNSLRM 108 (218)
T ss_dssp CCCEEEEESCTTCH--HHHHHHHH--CTTSEEEEECSCHHHHHHHHHHHHHT-TCSSEEEECSCHHHHHHHHSCTTCEEE
T ss_pred CCCeEEEEeeeChH--HHHHHHHH--CCCCeEEEEEecHHHHHHHHHHHHHh-CCCcEEEEECCHHHHHHHHcCCCChhe
Confidence 67899999999998 77788754 34689999999999999999999999 998 99999999998774 3 47999
Q ss_pred EEEe---CC--Cccc------HHHHHHh-ccCCCceEEEE
Q 027409 117 LVVD---CT--SKDF------ARVLRFA-RFSNKGAVLAF 144 (223)
Q Consensus 117 VFID---a~--K~~Y------~~~f~~~-~~l~~GgvIV~ 144 (223)
|++. .+ +.+. +.+++.+ +.|+|||++++
T Consensus 109 v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i 148 (218)
T 3dxy_A 109 VQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHM 148 (218)
T ss_dssp EEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEE
T ss_pred EEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEE
Confidence 9985 32 2222 3588765 67899998854
No 59
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.33 E-value=1.4e-11 Score=101.55 Aligned_cols=116 Identities=12% Similarity=-0.014 Sum_probs=89.3
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce------E
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV------S 97 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~------I 97 (223)
.+.+..-+++..++...++++|||||||+|+ .+.+++. ..+..+++.+|+++++++.|+++++.. |+. +
T Consensus 12 ~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~--~~~~l~~--~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~~~~~v 86 (217)
T 3jwh_A 12 SLNQQRMNGVVAALKQSNARRVIDLGCGQGN--LLKILLK--DSFFEQITGVDVSYRSLEIAQERLDRL-RLPRNQWERL 86 (217)
T ss_dssp CHHHHHHHHHHHHHHHTTCCEEEEETCTTCH--HHHHHHH--CTTCSEEEEEESCHHHHHHHHHHHTTC-CCCHHHHTTE
T ss_pred CHHHHHHHHHHHHHHhcCCCEEEEeCCCCCH--HHHHHHh--hCCCCEEEEEECCHHHHHHHHHHHHHh-cCCcccCcce
Confidence 4566677778788888899999999999998 7767764 333479999999999999999999887 653 9
Q ss_pred EEEecchHHHhcC-CCCccEEEEeCCCc-----ccHHHHHHh-ccCCCceEEEEe
Q 027409 98 EVIVRQAEEVMGE-LKGVDFLVVDCTSK-----DFARVLRFA-RFSNKGAVLAFK 145 (223)
Q Consensus 98 ~li~GdA~evL~~-L~~fDfVFIDa~K~-----~Y~~~f~~~-~~l~~GgvIV~D 145 (223)
+++.||+.. ++. .+.||+|+....-. ++..+++.+ +.++|||++++.
T Consensus 87 ~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~ 140 (217)
T 3jwh_A 87 QLIQGALTY-QDKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTT 140 (217)
T ss_dssp EEEECCTTS-CCGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred EEEeCCccc-ccccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEc
Confidence 999999742 221 24799999876433 446777655 677999988764
No 60
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.32 E-value=5.5e-12 Score=112.95 Aligned_cols=103 Identities=12% Similarity=0.062 Sum_probs=82.6
Q ss_pred hcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHh--hcCc--e-EEEEecchHHHhcCC-C
Q 027409 39 GWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYD--VVGW--V-SEVIVRQAEEVMGEL-K 112 (223)
Q Consensus 39 ~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~--a~G~--~-I~li~GdA~evL~~L-~ 112 (223)
..++++|||||||.|. .++.++. ..+.++++.+|+|++.++.|++++.. . ++ . ++++.||+.+.++.. +
T Consensus 114 ~~~~~~VLdiG~G~G~--~~~~l~~--~~~~~~v~~vDis~~~l~~ar~~~~~~~~-~~~~~~v~~~~~D~~~~l~~~~~ 188 (321)
T 2pt6_A 114 SKEPKNVLVVGGGDGG--IIRELCK--YKSVENIDICEIDETVIEVSKIYFKNISC-GYEDKRVNVFIEDASKFLENVTN 188 (321)
T ss_dssp SSSCCEEEEEECTTCH--HHHHHTT--CTTCCEEEEEESCHHHHHHHHHHCTTTSG-GGGSTTEEEEESCHHHHHHHCCS
T ss_pred CCCCCEEEEEcCCccH--HHHHHHH--cCCCCEEEEEECCHHHHHHHHHHHHhhcc-ccCCCcEEEEEccHHHHHhhcCC
Confidence 4578999999999997 6666642 33468999999999999999999986 3 34 3 999999999988654 4
Q ss_pred CccEEEEeCC------Cccc-HHHHHHh-ccCCCceEEEEeC
Q 027409 113 GVDFLVVDCT------SKDF-ARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 113 ~fDfVFIDa~------K~~Y-~~~f~~~-~~l~~GgvIV~DN 146 (223)
.||+|++|+. ...| .++++.+ +.|+|||++++..
T Consensus 189 ~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 189 TYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp CEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred CceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 7999999983 2334 7888866 5679999999974
No 61
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.32 E-value=6.1e-12 Score=104.55 Aligned_cols=113 Identities=13% Similarity=0.008 Sum_probs=90.3
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecc
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQ 103 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~Gd 103 (223)
+..|...+.+..++......+|||||||+|+ .++.++.. +++++.+|+++++++.|++++... | .++++.+|
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~--~~~~l~~~----~~~v~~vD~~~~~~~~a~~~~~~~-~-~v~~~~~d 124 (231)
T 1vbf_A 53 TTALNLGIFMLDELDLHKGQKVLEIGTGIGY--YTALIAEI----VDKVVSVEINEKMYNYASKLLSYY-N-NIKLILGD 124 (231)
T ss_dssp ECCHHHHHHHHHHTTCCTTCEEEEECCTTSH--HHHHHHHH----SSEEEEEESCHHHHHHHHHHHTTC-S-SEEEEESC
T ss_pred cCCHHHHHHHHHhcCCCCCCEEEEEcCCCCH--HHHHHHHH----cCEEEEEeCCHHHHHHHHHHHhhc-C-CeEEEECC
Confidence 5577777766666677778899999999998 77777654 279999999999999999999988 7 79999999
Q ss_pred hHHHhcCCCCccEEEEeCCCcccHHHHHHhccCCCceEEEEeC
Q 027409 104 AEEVMGELKGVDFLVVDCTSKDFARVLRFARFSNKGAVLAFKN 146 (223)
Q Consensus 104 A~evL~~L~~fDfVFIDa~K~~Y~~~f~~~~~l~~GgvIV~DN 146 (223)
+.+.++.-++||+|+++..-.+..+ +..+.++|||.+++..
T Consensus 125 ~~~~~~~~~~fD~v~~~~~~~~~~~--~~~~~L~pgG~l~~~~ 165 (231)
T 1vbf_A 125 GTLGYEEEKPYDRVVVWATAPTLLC--KPYEQLKEGGIMILPI 165 (231)
T ss_dssp GGGCCGGGCCEEEEEESSBBSSCCH--HHHHTEEEEEEEEEEE
T ss_pred cccccccCCCccEEEECCcHHHHHH--HHHHHcCCCcEEEEEE
Confidence 9885443357999999987655543 3446779999988763
No 62
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.32 E-value=7.9e-13 Score=115.45 Aligned_cols=95 Identities=8% Similarity=-0.083 Sum_probs=76.1
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhh---cCce-EEEEecchHHHhcCCCCcc
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDV---VGWV-SEVIVRQAEEVMGELKGVD 115 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a---~G~~-I~li~GdA~evL~~L~~fD 115 (223)
.+|++|||||||.|+ .+.+++. . + ++|+++|+|+++++.|+++|... .... ++++.|||.+.+ ++||
T Consensus 71 ~~~~~VL~iG~G~G~--~~~~ll~--~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD 141 (262)
T 2cmg_A 71 KELKEVLIVDGFDLE--LAHQLFK--Y-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYD 141 (262)
T ss_dssp SCCCEEEEESSCCHH--HHHHHTT--S-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEE
T ss_pred CCCCEEEEEeCCcCH--HHHHHHh--C-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCC
Confidence 478999999999998 6655542 2 4 89999999999999999998641 0123 999999999876 6899
Q ss_pred EEEEeCCCcccHHHHHHh-ccCCCceEEEEe
Q 027409 116 FLVVDCTSKDFARVLRFA-RFSNKGAVLAFK 145 (223)
Q Consensus 116 fVFIDa~K~~Y~~~f~~~-~~l~~GgvIV~D 145 (223)
+|++|+.... .+|+.+ +.|+|||++++.
T Consensus 142 ~Ii~d~~dp~--~~~~~~~~~L~pgG~lv~~ 170 (262)
T 2cmg_A 142 LIFCLQEPDI--HRIDGLKRMLKEDGVFISV 170 (262)
T ss_dssp EEEESSCCCH--HHHHHHHTTEEEEEEEEEE
T ss_pred EEEECCCChH--HHHHHHHHhcCCCcEEEEE
Confidence 9999986543 377766 567999999985
No 63
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.32 E-value=6.3e-12 Score=111.17 Aligned_cols=116 Identities=8% Similarity=0.001 Sum_probs=92.7
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEec
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVR 102 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~G 102 (223)
...|...+.+...+......+|||||||.|+ .++.+|... ..+++|+.+|+++++++.|++++++. |+. |+++.+
T Consensus 58 ~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~--~~~~la~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~-g~~~v~~~~~ 133 (317)
T 1dl5_A 58 SSQPSLMALFMEWVGLDKGMRVLEIGGGTGY--NAAVMSRVV-GEKGLVVSVEYSRKICEIAKRNVERL-GIENVIFVCG 133 (317)
T ss_dssp ECCHHHHHHHHHHTTCCTTCEEEEECCTTSH--HHHHHHHHH-CTTCEEEEEESCHHHHHHHHHHHHHT-TCCSEEEEES
T ss_pred ccCHHHHHHHHHhcCCCCcCEEEEecCCchH--HHHHHHHhc-CCCCEEEEEECCHHHHHHHHHHHHHc-CCCCeEEEEC
Confidence 4456666666666666778899999999998 777777653 33589999999999999999999999 988 999999
Q ss_pred chHHHhcCCCCccEEEEeCCCcccHHHHHHhccCCCceEEEEe
Q 027409 103 QAEEVMGELKGVDFLVVDCTSKDFARVLRFARFSNKGAVLAFK 145 (223)
Q Consensus 103 dA~evL~~L~~fDfVFIDa~K~~Y~~~f~~~~~l~~GgvIV~D 145 (223)
|+.+.++..++||+|+++..-++..+ ...+.|+|||+++..
T Consensus 134 d~~~~~~~~~~fD~Iv~~~~~~~~~~--~~~~~LkpgG~lvi~ 174 (317)
T 1dl5_A 134 DGYYGVPEFSPYDVIFVTVGVDEVPE--TWFTQLKEGGRVIVP 174 (317)
T ss_dssp CGGGCCGGGCCEEEEEECSBBSCCCH--HHHHHEEEEEEEEEE
T ss_pred ChhhccccCCCeEEEEEcCCHHHHHH--HHHHhcCCCcEEEEE
Confidence 99886654468999999987766553 233567899999886
No 64
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.32 E-value=2.8e-12 Score=113.78 Aligned_cols=103 Identities=12% Similarity=0.081 Sum_probs=77.8
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhh----cCce-EEEEecchHHHhcCC-CC
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDV----VGWV-SEVIVRQAEEVMGEL-KG 113 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a----~G~~-I~li~GdA~evL~~L-~~ 113 (223)
-+|++||+||||.|. .+..++. ..+..+|+.+|+|++.++.|++++... +... ++++.||+.+.++.. +.
T Consensus 82 ~~~~~VLdiG~G~G~--~~~~l~~--~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~ 157 (294)
T 3adn_A 82 GHAKHVLIIGGGDGA--MLREVTR--HKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQT 157 (294)
T ss_dssp TTCCEEEEESCTTCH--HHHHHHT--CTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCC
T ss_pred CCCCEEEEEeCChhH--HHHHHHh--CCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCC
Confidence 579999999999997 6666653 344679999999999999999998864 0123 999999999988765 48
Q ss_pred ccEEEEeCCCccc-------HHHHHHh-ccCCCceEEEEeC
Q 027409 114 VDFLVVDCTSKDF-------ARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 114 fDfVFIDa~K~~Y-------~~~f~~~-~~l~~GgvIV~DN 146 (223)
||+|++|+..... .++|+.+ +.|+|||++++..
T Consensus 158 fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 158 FDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EEEEEECC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccEEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 9999999864322 5688766 5779999999864
No 65
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.32 E-value=6.9e-12 Score=109.11 Aligned_cols=114 Identities=11% Similarity=0.058 Sum_probs=91.4
Q ss_pred cHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEecch
Q 027409 26 ESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVRQA 104 (223)
Q Consensus 26 ~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~GdA 104 (223)
.+...+-+.++....+.++|||+|||+|+ .++.+|... ..++|+.+|.+++.++.|++|++.. |+. ++++.||+
T Consensus 104 ~~~~~e~~~~~~~~~~~~~VLDlgcG~G~--~s~~la~~~--~~~~V~~vD~s~~av~~a~~n~~~n-~l~~~~~~~~d~ 178 (272)
T 3a27_A 104 QGNIEERKRMAFISNENEVVVDMFAGIGY--FTIPLAKYS--KPKLVYAIEKNPTAYHYLCENIKLN-KLNNVIPILADN 178 (272)
T ss_dssp GGGHHHHHHHHTSCCTTCEEEETTCTTTT--THHHHHHHT--CCSEEEEEECCHHHHHHHHHHHHHT-TCSSEEEEESCG
T ss_pred CCchHHHHHHHHhcCCCCEEEEecCcCCH--HHHHHHHhC--CCCEEEEEeCCHHHHHHHHHHHHHc-CCCCEEEEECCh
Confidence 44445555555556677899999999998 777877543 2579999999999999999999998 987 99999999
Q ss_pred HHHhcCCCCccEEEEeCCCcccHHHHHH-hccCCCceEEEEeC
Q 027409 105 EEVMGELKGVDFLVVDCTSKDFARVLRF-ARFSNKGAVLAFKN 146 (223)
Q Consensus 105 ~evL~~L~~fDfVFIDa~K~~Y~~~f~~-~~~l~~GgvIV~DN 146 (223)
.+. +..+.||+|++|.-. .+.++++. ++.++|||++++-.
T Consensus 179 ~~~-~~~~~~D~Vi~d~p~-~~~~~l~~~~~~LkpgG~l~~s~ 219 (272)
T 3a27_A 179 RDV-ELKDVADRVIMGYVH-KTHKFLDKTFEFLKDRGVIHYHE 219 (272)
T ss_dssp GGC-CCTTCEEEEEECCCS-SGGGGHHHHHHHEEEEEEEEEEE
T ss_pred HHc-CccCCceEEEECCcc-cHHHHHHHHHHHcCCCCEEEEEE
Confidence 997 553579999999865 77788875 56778888876544
No 66
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.32 E-value=2.4e-12 Score=112.42 Aligned_cols=106 Identities=10% Similarity=-0.026 Sum_probs=86.2
Q ss_pred hcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCCCCccE
Q 027409 39 GWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGELKGVDF 116 (223)
Q Consensus 39 ~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L~~fDf 116 (223)
.....+|||||||+|+ .++.||.+ ..++++++.+|+++++++.|++++++. |+. |+++.||+.+.-.. +.||+
T Consensus 116 l~~~~~vLDiGcG~G~--~~~~la~~-~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~v~~~~~d~~~~~~~-~~fD~ 190 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMS--ELLALDYS-ACPGVQLVGIDYDPEALDGATRLAAGH-ALAGQITLHRQDAWKLDTR-EGYDL 190 (305)
T ss_dssp CCTTCEEEETTCTTCH--HHHTSCCT-TCTTCEEEEEESCHHHHHHHHHHHTTS-TTGGGEEEEECCGGGCCCC-SCEEE
T ss_pred CCCCCEEEEecCCCCH--HHHHHHHh-cCCCCeEEEEECCHHHHHHHHHHHHhc-CCCCceEEEECchhcCCcc-CCeEE
Confidence 4567899999999998 66666422 345789999999999999999999998 887 99999999985333 68999
Q ss_pred EEEeC------CCcccHHHHHHh-ccCCCceEEEEeCCCC
Q 027409 117 LVVDC------TSKDFARVLRFA-RFSNKGAVLAFKNAFQ 149 (223)
Q Consensus 117 VFIDa------~K~~Y~~~f~~~-~~l~~GgvIV~DNvl~ 149 (223)
|+... ++..+..+++.+ +.|+|||.+++.+...
T Consensus 191 v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 230 (305)
T 3ocj_A 191 LTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTP 230 (305)
T ss_dssp EECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCC
T ss_pred EEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCC
Confidence 99976 555566678755 6779999999988543
No 67
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.31 E-value=1.8e-11 Score=102.27 Aligned_cols=114 Identities=12% Similarity=-0.072 Sum_probs=91.3
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEe
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIV 101 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~ 101 (223)
++.|....++...+......+|||+|||+|. .++.++.. +++++.+|+++++++.|++++++. |+. ++++.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~vldiG~G~G~--~~~~l~~~----~~~v~~vD~~~~~~~~a~~~~~~~-~~~~~~~~~~ 146 (248)
T 2yvl_A 74 IIYPKDSFYIALKLNLNKEKRVLEFGTGSGA--LLAVLSEV----AGEVWTFEAVEEFYKTAQKNLKKF-NLGKNVKFFN 146 (248)
T ss_dssp CCCHHHHHHHHHHTTCCTTCEEEEECCTTSH--HHHHHHHH----SSEEEEECSCHHHHHHHHHHHHHT-TCCTTEEEEC
T ss_pred cccchhHHHHHHhcCCCCCCEEEEeCCCccH--HHHHHHHh----CCEEEEEecCHHHHHHHHHHHHHc-CCCCcEEEEE
Confidence 6778777777777777778899999999998 77777754 579999999999999999999998 884 99999
Q ss_pred cchHHHhcCCCCccEEEEeCCCcccHHHHHHh-ccCCCceEEEEeC
Q 027409 102 RQAEEVMGELKGVDFLVVDCTSKDFARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 102 GdA~evL~~L~~fDfVFIDa~K~~Y~~~f~~~-~~l~~GgvIV~DN 146 (223)
+|+.+.+..-..||+||.|.. +...+++.+ +.++|||.++.-.
T Consensus 147 ~d~~~~~~~~~~~D~v~~~~~--~~~~~l~~~~~~L~~gG~l~~~~ 190 (248)
T 2yvl_A 147 VDFKDAEVPEGIFHAAFVDVR--EPWHYLEKVHKSLMEGAPVGFLL 190 (248)
T ss_dssp SCTTTSCCCTTCBSEEEECSS--CGGGGHHHHHHHBCTTCEEEEEE
T ss_pred cChhhcccCCCcccEEEECCc--CHHHHHHHHHHHcCCCCEEEEEe
Confidence 999885512247999999764 444677654 6678999877643
No 68
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.31 E-value=2.8e-11 Score=101.69 Aligned_cols=129 Identities=15% Similarity=0.001 Sum_probs=97.5
Q ss_pred HHHHHhhcccCCCCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHh
Q 027409 12 KAYIDTVKSCENIKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYD 91 (223)
Q Consensus 12 ~ayl~~l~~~~~ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~ 91 (223)
..|.........++.|.....+..++......+|||+|||.|. .+++++... .++++++.+|.++++++.|+++++.
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~--~~~~l~~~~-~~~~~v~~~D~~~~~~~~a~~~~~~ 143 (258)
T 2pwy_A 67 EEYLLHMKRSATPTYPKDASAMVTLLDLAPGMRVLEAGTGSGG--LTLFLARAV-GEKGLVESYEARPHHLAQAERNVRA 143 (258)
T ss_dssp HHHHHHSCCSSCCCCHHHHHHHHHHTTCCTTCEEEEECCTTSH--HHHHHHHHH-CTTSEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHhhcCccccccccchHHHHHHHHcCCCCCCEEEEECCCcCH--HHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHH
Confidence 4566666555557777666666666677788899999999998 777777543 3468999999999999999999987
Q ss_pred hcCce-EEEEecchHHH-hcCCCCccEEEEeCCCcccHHHHHHh-ccCCCceEEEEeC
Q 027409 92 VVGWV-SEVIVRQAEEV-MGELKGVDFLVVDCTSKDFARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 92 a~G~~-I~li~GdA~ev-L~~L~~fDfVFIDa~K~~Y~~~f~~~-~~l~~GgvIV~DN 146 (223)
..|.. ++++.+|+.+. ++. +.||+||+|.. ....+++.+ +.++|||.+++-.
T Consensus 144 ~~g~~~v~~~~~d~~~~~~~~-~~~D~v~~~~~--~~~~~l~~~~~~L~~gG~l~~~~ 198 (258)
T 2pwy_A 144 FWQVENVRFHLGKLEEAELEE-AAYDGVALDLM--EPWKVLEKAALALKPDRFLVAYL 198 (258)
T ss_dssp HCCCCCEEEEESCGGGCCCCT-TCEEEEEEESS--CGGGGHHHHHHHEEEEEEEEEEE
T ss_pred hcCCCCEEEEECchhhcCCCC-CCcCEEEECCc--CHHHHHHHHHHhCCCCCEEEEEe
Confidence 42544 99999999886 332 47999999864 445677755 5678899877643
No 69
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.30 E-value=2.3e-11 Score=100.69 Aligned_cols=100 Identities=13% Similarity=0.139 Sum_probs=80.8
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEecchHHHhcCC--CCccE
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVRQAEEVMGEL--KGVDF 116 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~GdA~evL~~L--~~fDf 116 (223)
....+|||||||+|+ .++.+|.. .++++++.+|++++.++.|++++++. |+. |+++.||+.+....+ +.||+
T Consensus 40 ~~~~~vLDiGcG~G~--~~~~la~~--~p~~~v~gvD~s~~~l~~a~~~~~~~-~~~~v~~~~~d~~~~~~~~~~~~~D~ 114 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGA--FVSGMAKQ--NPDINYIGIDIQKSVLSYALDKVLEV-GVPNIKLLWVDGSDLTDYFEDGEIDR 114 (214)
T ss_dssp SCCCEEEEESCTTSH--HHHHHHHH--CTTSEEEEEESCHHHHHHHHHHHHHH-CCSSEEEEECCSSCGGGTSCTTCCSE
T ss_pred CCCCeEEEEccCcCH--HHHHHHHH--CCCCCEEEEEcCHHHHHHHHHHHHHc-CCCCEEEEeCCHHHHHhhcCCCCCCE
Confidence 457899999999998 77777654 24689999999999999999999999 987 999999998843224 37999
Q ss_pred EEEeCCCc-----------ccHHHHHHh-ccCCCceEEEE
Q 027409 117 LVVDCTSK-----------DFARVLRFA-RFSNKGAVLAF 144 (223)
Q Consensus 117 VFIDa~K~-----------~Y~~~f~~~-~~l~~GgvIV~ 144 (223)
|+++.... .|..+++.+ +.|+|||++++
T Consensus 115 i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 154 (214)
T 1yzh_A 115 LYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHF 154 (214)
T ss_dssp EEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEE
T ss_pred EEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEE
Confidence 99985422 356788765 66799998876
No 70
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.30 E-value=2.2e-11 Score=102.27 Aligned_cols=116 Identities=10% Similarity=-0.025 Sum_probs=89.0
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEe
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIV 101 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~ 101 (223)
+..+...+.|...+......+|||||||+|. .++.+|... +++++.+|+++++++.|++++++. |+. |+++.
T Consensus 19 ~~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~--~~~~la~~~---~~~v~gvD~s~~~l~~a~~~~~~~-~~~~~v~~~~ 92 (256)
T 1nkv_A 19 PFTEEKYATLGRVLRMKPGTRILDLGSGSGE--MLCTWARDH---GITGTGIDMSSLFTAQAKRRAEEL-GVSERVHFIH 92 (256)
T ss_dssp SCCHHHHHHHHHHTCCCTTCEEEEETCTTCH--HHHHHHHHT---CCEEEEEESCHHHHHHHHHHHHHT-TCTTTEEEEE
T ss_pred CCCHHHHHHHHHhcCCCCCCEEEEECCCCCH--HHHHHHHhc---CCeEEEEeCCHHHHHHHHHHHHhc-CCCcceEEEE
Confidence 5566555555555556677899999999998 677776543 569999999999999999999998 886 99999
Q ss_pred cchHHHhcCCCCccEEEEeCCCc---ccHHHHHHh-ccCCCceEEEEeC
Q 027409 102 RQAEEVMGELKGVDFLVVDCTSK---DFARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 102 GdA~evL~~L~~fDfVFIDa~K~---~Y~~~f~~~-~~l~~GgvIV~DN 146 (223)
||+.+... -+.||+|+.-..-. +...++..+ +.|+|||.+++-.
T Consensus 93 ~d~~~~~~-~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 93 NDAAGYVA-NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp SCCTTCCC-SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred CChHhCCc-CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence 99987543 35799999744332 346777655 5679999888754
No 71
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.29 E-value=2.6e-11 Score=99.89 Aligned_cols=116 Identities=9% Similarity=-0.053 Sum_probs=87.9
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCc------eE
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGW------VS 97 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~------~I 97 (223)
.+.+..-+++..++...++++|||||||+|+ .+.+++. ..+..+++.+|+++++++.|++++... ++ .+
T Consensus 12 ~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~--~~~~l~~--~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~~~~~v 86 (219)
T 3jwg_A 12 NLNQQRLGTVVAVLKSVNAKKVIDLGCGEGN--LLSLLLK--DKSFEQITGVDVSYSVLERAKDRLKID-RLPEMQRKRI 86 (219)
T ss_dssp CHHHHHHHHHHHHHHHTTCCEEEEETCTTCH--HHHHHHT--STTCCEEEEEESCHHHHHHHHHHHTGG-GSCHHHHTTE
T ss_pred cchHHHHHHHHHHHhhcCCCEEEEecCCCCH--HHHHHHh--cCCCCEEEEEECCHHHHHHHHHHHHhh-ccccccCcce
Confidence 4556667777777778899999999999998 6767753 233479999999999999999999877 65 39
Q ss_pred EEEecchHHHhcC-CCCccEEEEeCCCccc-----HHHHHHh-ccCCCceEEEEe
Q 027409 98 EVIVRQAEEVMGE-LKGVDFLVVDCTSKDF-----ARVLRFA-RFSNKGAVLAFK 145 (223)
Q Consensus 98 ~li~GdA~evL~~-L~~fDfVFIDa~K~~Y-----~~~f~~~-~~l~~GgvIV~D 145 (223)
+++.||+.+ ++. .+.||+|+....-+.. ..+++.+ +.++|||+++..
T Consensus 87 ~~~~~d~~~-~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 140 (219)
T 3jwg_A 87 SLFQSSLVY-RDKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVST 140 (219)
T ss_dssp EEEECCSSS-CCGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred EEEeCcccc-cccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEc
Confidence 999999833 221 2479999976543333 4666654 677999988764
No 72
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.29 E-value=1.2e-11 Score=98.40 Aligned_cols=109 Identities=9% Similarity=-0.040 Sum_probs=83.9
Q ss_pred HHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce---EEEEecchH
Q 027409 29 VAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV---SEVIVRQAE 105 (223)
Q Consensus 29 ~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~---I~li~GdA~ 105 (223)
+..++. .+......+|||||||.|. .++.++.. +++++.+|+++++++.|+++++.. |+. ++++.+|+.
T Consensus 41 ~~~l~~-~~~~~~~~~vLdiG~G~G~--~~~~~~~~----~~~v~~~D~~~~~~~~a~~~~~~~-~~~~~~~~~~~~d~~ 112 (194)
T 1dus_A 41 TKILVE-NVVVDKDDDILDLGCGYGV--IGIALADE----VKSTTMADINRRAIKLAKENIKLN-NLDNYDIRVVHSDLY 112 (194)
T ss_dssp HHHHHH-HCCCCTTCEEEEETCTTSH--HHHHHGGG----SSEEEEEESCHHHHHHHHHHHHHT-TCTTSCEEEEECSTT
T ss_pred HHHHHH-HcccCCCCeEEEeCCCCCH--HHHHHHHc----CCeEEEEECCHHHHHHHHHHHHHc-CCCccceEEEECchh
Confidence 333333 3344577899999999998 66666532 679999999999999999999998 876 999999998
Q ss_pred HHhcCCCCccEEEEeCC----CcccHHHHHHh-ccCCCceEEEEeC
Q 027409 106 EVMGELKGVDFLVVDCT----SKDFARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 106 evL~~L~~fDfVFIDa~----K~~Y~~~f~~~-~~l~~GgvIV~DN 146 (223)
+.++ -+.||+|+.+.. ......+++.+ +.++|||.+++..
T Consensus 113 ~~~~-~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 157 (194)
T 1dus_A 113 ENVK-DRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVI 157 (194)
T ss_dssp TTCT-TSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccc-cCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEE
Confidence 8544 247999999874 34456777654 5678999887754
No 73
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.28 E-value=1.3e-11 Score=109.74 Aligned_cols=119 Identities=10% Similarity=0.039 Sum_probs=92.4
Q ss_pred CcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEecc
Q 027409 25 KESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVRQ 103 (223)
Q Consensus 25 i~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~Gd 103 (223)
++.....++..++......+|||+|||.|. .|+.||.. .+++|+|+.+|+++++++.|++++++. |+. |+++.+|
T Consensus 102 ~qd~~s~l~~~~l~~~~g~~VLDlg~G~G~--~t~~la~~-~~~~~~v~avD~s~~~l~~a~~~~~~~-g~~~v~~~~~D 177 (315)
T 1ixk_A 102 IQEASSMYPPVALDPKPGEIVADMAAAPGG--KTSYLAQL-MRNDGVIYAFDVDENRLRETRLNLSRL-GVLNVILFHSS 177 (315)
T ss_dssp ECCHHHHHHHHHHCCCTTCEEEECCSSCSH--HHHHHHHH-TTTCSEEEEECSCHHHHHHHHHHHHHH-TCCSEEEESSC
T ss_pred EeCHHHHHHHHHhCCCCCCEEEEeCCCCCH--HHHHHHHH-hCCCCEEEEEcCCHHHHHHHHHHHHHh-CCCeEEEEECC
Confidence 444556666666667777899999999998 77777754 345689999999999999999999999 997 9999999
Q ss_pred hHHHhcCCCCccEEEEeCCCcc-------------------------cHHHHHH-hccCCCceEEEEeCC
Q 027409 104 AEEVMGELKGVDFLVVDCTSKD-------------------------FARVLRF-ARFSNKGAVLAFKNA 147 (223)
Q Consensus 104 A~evL~~L~~fDfVFIDa~K~~-------------------------Y~~~f~~-~~~l~~GgvIV~DNv 147 (223)
+.+....-+.||.|++|+--.. +.++++. .+.++|||.+|....
T Consensus 178 ~~~~~~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stc 247 (315)
T 1ixk_A 178 SLHIGELNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTC 247 (315)
T ss_dssp GGGGGGGCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred hhhcccccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 9886442247999999964211 2466664 467799999988664
No 74
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.28 E-value=2.1e-11 Score=101.11 Aligned_cols=116 Identities=10% Similarity=-0.009 Sum_probs=85.9
Q ss_pred CCcHHHH-HHHHHHH-HhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCc-----e
Q 027409 24 IKESGVA-ELLSAMA-AGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGW-----V 96 (223)
Q Consensus 24 ii~p~~g-~fL~~L~-~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~-----~ 96 (223)
+..|..- .++..+. ......+|||||||.|+ .++.++... .+.++++.+|+++++++.|++++++. |. .
T Consensus 58 ~~~p~~~~~~l~~l~~~~~~~~~vLDiG~G~G~--~~~~la~~~-~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~ 133 (226)
T 1i1n_A 58 ISAPHMHAYALELLFDQLHEGAKALDVGSGSGI--LTACFARMV-GCTGKVIGIDHIKELVDDSVNNVRKD-DPTLLSSG 133 (226)
T ss_dssp ECCHHHHHHHHHHTTTTSCTTCEEEEETCTTSH--HHHHHHHHH-CTTCEEEEEESCHHHHHHHHHHHHHH-CTHHHHTS
T ss_pred ecCHHHHHHHHHHHHhhCCCCCEEEEEcCCcCH--HHHHHHHHh-CCCcEEEEEeCCHHHHHHHHHHHHhh-cccccCCC
Confidence 3455543 4444443 24567899999999998 777776543 34579999999999999999999997 74 3
Q ss_pred -EEEEecchHHHhcCCCCccEEEEeCCCcccHHHHHHhccCCCceEEEEe
Q 027409 97 -SEVIVRQAEEVMGELKGVDFLVVDCTSKDFARVLRFARFSNKGAVLAFK 145 (223)
Q Consensus 97 -I~li~GdA~evL~~L~~fDfVFIDa~K~~Y~~~f~~~~~l~~GgvIV~D 145 (223)
++++.+|+.+....-.+||+|++++.-.+..+ +..+.++|||.+++-
T Consensus 134 ~v~~~~~d~~~~~~~~~~fD~i~~~~~~~~~~~--~~~~~LkpgG~lv~~ 181 (226)
T 1i1n_A 134 RVQLVVGDGRMGYAEEAPYDAIHVGAAAPVVPQ--ALIDQLKPGGRLILP 181 (226)
T ss_dssp SEEEEESCGGGCCGGGCCEEEEEECSBBSSCCH--HHHHTEEEEEEEEEE
T ss_pred cEEEEECCcccCcccCCCcCEEEECCchHHHHH--HHHHhcCCCcEEEEE
Confidence 99999999864333357999999987655432 234677999999885
No 75
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.28 E-value=1.4e-11 Score=105.40 Aligned_cols=109 Identities=17% Similarity=0.148 Sum_probs=87.1
Q ss_pred HHHHHHHHHhc-CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHH
Q 027409 30 AELLSAMAAGW-NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEE 106 (223)
Q Consensus 30 g~fL~~L~~~~-~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~e 106 (223)
+.+|..++... +..+|||+|||+|. .++.+|. .. .++|+.+|+++++++.|++|++.. |+. |+++.+|+.+
T Consensus 37 ~~ll~~~~~~~~~~~~vLDlG~G~G~--~~~~la~--~~-~~~v~gvDi~~~~~~~a~~n~~~~-~~~~~v~~~~~D~~~ 110 (259)
T 3lpm_A 37 AVLLAKFSYLPIRKGKIIDLCSGNGI--IPLLLST--RT-KAKIVGVEIQERLADMAKRSVAYN-QLEDQIEIIEYDLKK 110 (259)
T ss_dssp HHHHHHHCCCCSSCCEEEETTCTTTH--HHHHHHT--TC-CCEEEEECCSHHHHHHHHHHHHHT-TCTTTEEEECSCGGG
T ss_pred HHHHHHHhcCCCCCCEEEEcCCchhH--HHHHHHH--hc-CCcEEEEECCHHHHHHHHHHHHHC-CCcccEEEEECcHHH
Confidence 56777777666 78899999999998 6766653 22 349999999999999999999998 887 9999999999
Q ss_pred HhcCC--CCccEEEEeCC---------C--------------cccHHHHHHh-ccCCCceEEEE
Q 027409 107 VMGEL--KGVDFLVVDCT---------S--------------KDFARVLRFA-RFSNKGAVLAF 144 (223)
Q Consensus 107 vL~~L--~~fDfVFIDa~---------K--------------~~Y~~~f~~~-~~l~~GgvIV~ 144 (223)
..+.+ +.||+|+.|.- + ..+..+++.+ +.|+|||.+++
T Consensus 111 ~~~~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~ 174 (259)
T 3lpm_A 111 ITDLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANF 174 (259)
T ss_dssp GGGTSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEE
T ss_pred hhhhhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEE
Confidence 87655 47999999621 1 2245677655 66799999988
No 76
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.28 E-value=2.8e-11 Score=101.14 Aligned_cols=100 Identities=15% Similarity=0.131 Sum_probs=79.5
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEecchHHHhcCC--CCccE
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVRQAEEVMGEL--KGVDF 116 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~GdA~evL~~L--~~fDf 116 (223)
....+|||||||+|. .++.||.. .++++++.||+++++++.|+++.++. |+. |+++.||+.+....+ +.||.
T Consensus 37 ~~~~~vLDiGcG~G~--~~~~la~~--~p~~~v~giD~s~~~l~~a~~~~~~~-~~~nv~~~~~d~~~l~~~~~~~~~d~ 111 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQ--FISGMAKQ--NPDINYIGIELFKSVIVTAVQKVKDS-EAQNVKLLNIDADTLTDVFEPGEVKR 111 (213)
T ss_dssp SCCCEEEEECCTTSH--HHHHHHHH--CTTSEEEEECSCHHHHHHHHHHHHHS-CCSSEEEECCCGGGHHHHCCTTSCCE
T ss_pred CCCceEEEEecCCCH--HHHHHHHH--CCCCCEEEEEechHHHHHHHHHHHHc-CCCCEEEEeCCHHHHHhhcCcCCcCE
Confidence 467899999999998 77777754 35789999999999999999999998 988 999999998843223 37999
Q ss_pred EEEeC---CCc--------ccHHHHHHh-ccCCCceEEEE
Q 027409 117 LVVDC---TSK--------DFARVLRFA-RFSNKGAVLAF 144 (223)
Q Consensus 117 VFIDa---~K~--------~Y~~~f~~~-~~l~~GgvIV~ 144 (223)
|++.. +.. .+..+++.+ +.|+|||.+++
T Consensus 112 v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~ 151 (213)
T 2fca_A 112 VYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHF 151 (213)
T ss_dssp EEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEE
T ss_pred EEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEE
Confidence 99853 211 157888765 66799998874
No 77
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.27 E-value=8.7e-12 Score=114.63 Aligned_cols=100 Identities=13% Similarity=0.092 Sum_probs=78.0
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcC---c------eEEEEecchHHHhcCC
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVG---W------VSEVIVRQAEEVMGEL 111 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G---~------~I~li~GdA~evL~~L 111 (223)
+|++||+||+|.|+ .+..++. .++ .+|+.+|+|++.++.||+||... + + .++++.|||.+.|+++
T Consensus 188 ~pkrVL~IGgG~G~--~arellk--~~~-~~Vt~VEID~~vie~Ar~~~~~l-~~~~l~dp~~~rv~vi~~Da~~~L~~~ 261 (364)
T 2qfm_A 188 TGKDVLILGGGDGG--ILCEIVK--LKP-KMVTMVEIDQMVIDGCKKYMRKT-CGDVLDNLKGDCYQVLIEDCIPVLKRY 261 (364)
T ss_dssp TTCEEEEEECTTCH--HHHHHHT--TCC-SEEEEEESCHHHHHHHHHHCCC-----CCSSSEETTEEEEESCHHHHHHHH
T ss_pred CCCEEEEEECChhH--HHHHHHH--CCC-CEEEEEECCHHHHHHHHHHHHHh-ccccccccCCCcEEEEECcHHHHHHhh
Confidence 68999999999998 5555542 233 79999999999999999998743 2 1 2899999999999864
Q ss_pred ----CCccEEEEeCCC-c-------cc-HHHHHHh-----ccCCCceEEEEeC
Q 027409 112 ----KGVDFLVVDCTS-K-------DF-ARVLRFA-----RFSNKGAVLAFKN 146 (223)
Q Consensus 112 ----~~fDfVFIDa~K-~-------~Y-~~~f~~~-----~~l~~GgvIV~DN 146 (223)
+.||+||+|+.. . .| .++++.+ +.|+|||++++..
T Consensus 262 ~~~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs 314 (364)
T 2qfm_A 262 AKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 314 (364)
T ss_dssp HHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hccCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEc
Confidence 479999999854 1 23 5666654 5679999999875
No 78
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.27 E-value=3.2e-11 Score=103.13 Aligned_cols=129 Identities=15% Similarity=0.065 Sum_probs=95.4
Q ss_pred HHHHhhcccCCCCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhh
Q 027409 13 AYIDTVKSCENIKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDV 92 (223)
Q Consensus 13 ayl~~l~~~~~ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a 92 (223)
.|...+.....++.|.....+...+......+|||+|||.|. .+++++... .++++++++|+++++++.|+++++..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~--~~~~l~~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~ 147 (280)
T 1i9g_A 71 DYVMSMPRGPQVIYPKDAAQIVHEGDIFPGARVLEAGAGSGA--LTLSLLRAV-GPAGQVISYEQRADHAEHARRNVSGC 147 (280)
T ss_dssp HHHTTSCSCSCCCCHHHHHHHHHHTTCCTTCEEEEECCTTSH--HHHHHHHHH-CTTSEEEEECSCHHHHHHHHHHHHHH
T ss_pred HHHhhccccceeecHHHHHHHHHHcCCCCCCEEEEEcccccH--HHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHHh
Confidence 555555444446777666666666666777899999999998 777777543 34689999999999999999999863
Q ss_pred cC--ce-EEEEecchHHHhcCCCCccEEEEeCCCcccHHHHHHh-ccCCCceEEEEeC
Q 027409 93 VG--WV-SEVIVRQAEEVMGELKGVDFLVVDCTSKDFARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 93 ~G--~~-I~li~GdA~evL~~L~~fDfVFIDa~K~~Y~~~f~~~-~~l~~GgvIV~DN 146 (223)
+| .. ++++.+|+.+....-+.||+||+|.. +...+++.+ +.++|||.+++-.
T Consensus 148 ~g~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~--~~~~~l~~~~~~L~pgG~l~~~~ 203 (280)
T 1i9g_A 148 YGQPPDNWRLVVSDLADSELPDGSVDRAVLDML--APWEVLDAVSRLLVAGGVLMVYV 203 (280)
T ss_dssp HTSCCTTEEEECSCGGGCCCCTTCEEEEEEESS--CGGGGHHHHHHHEEEEEEEEEEE
T ss_pred cCCCCCcEEEEECchHhcCCCCCceeEEEECCc--CHHHHHHHHHHhCCCCCEEEEEe
Confidence 14 33 99999999885222247999999874 444677755 5679999888743
No 79
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.27 E-value=1.2e-11 Score=103.32 Aligned_cols=116 Identities=9% Similarity=-0.059 Sum_probs=85.5
Q ss_pred cHHH-HHHHHHHH-HhcCCCeEEEEccCcchHHHHHHHHHhcCC----CCcEEEEEeCCchHHHHHHHHHHhhcC-----
Q 027409 26 ESGV-AELLSAMA-AGWNAKLIVEAWTHGGPITTSIGLAIAARH----TCARHVCIVPDERSRLAYVKAMYDVVG----- 94 (223)
Q Consensus 26 ~p~~-g~fL~~L~-~~~~ak~ILEIGT~~Gys~Stl~la~A~~~----~~g~i~TIE~d~e~~~~Ar~~~~~a~G----- 94 (223)
.|.. ..++..|. ......+|||||||.|| .+..++..... ..++++++|+++++++.|++++++. |
T Consensus 67 ~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~--~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-~~~~~~ 143 (227)
T 1r18_A 67 APHMHAFALEYLRDHLKPGARILDVGSGSGY--LTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTD-DRSMLD 143 (227)
T ss_dssp CHHHHHHHHHHTTTTCCTTCEEEEESCTTSH--HHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHH-HHHHHH
T ss_pred ChHHHHHHHHHHHhhCCCCCEEEEECCCccH--HHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhc-CccccC
Confidence 4553 44444444 24455799999999999 67677653211 1369999999999999999999987 7
Q ss_pred ce-EEEEecchHHHhcCCCCccEEEEeCCCcccHHHHHHhccCCCceEEEEeC
Q 027409 95 WV-SEVIVRQAEEVMGELKGVDFLVVDCTSKDFARVLRFARFSNKGAVLAFKN 146 (223)
Q Consensus 95 ~~-I~li~GdA~evL~~L~~fDfVFIDa~K~~Y~~~f~~~~~l~~GgvIV~DN 146 (223)
.. |+++.||+.+.++...+||+|++++.-.+..+ +..+.|+|||.+++.-
T Consensus 144 ~~~v~~~~~d~~~~~~~~~~fD~I~~~~~~~~~~~--~~~~~LkpgG~lvi~~ 194 (227)
T 1r18_A 144 SGQLLIVEGDGRKGYPPNAPYNAIHVGAAAPDTPT--ELINQLASGGRLIVPV 194 (227)
T ss_dssp HTSEEEEESCGGGCCGGGCSEEEEEECSCBSSCCH--HHHHTEEEEEEEEEEE
T ss_pred CCceEEEECCcccCCCcCCCccEEEECCchHHHHH--HHHHHhcCCCEEEEEE
Confidence 44 99999999885544357999999998766542 2346679999998863
No 80
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.26 E-value=4.6e-11 Score=96.98 Aligned_cols=112 Identities=13% Similarity=0.079 Sum_probs=84.2
Q ss_pred HHHHHHHHhc--CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHH
Q 027409 31 ELLSAMAAGW--NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEE 106 (223)
Q Consensus 31 ~fL~~L~~~~--~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~e 106 (223)
.+...++... ++.+|||||||+|. .+.+++.. ++++++.+|+++++++.|+++++.. |+. ++++.+|+.+
T Consensus 31 ~~~~~~~~~~~~~~~~vLdiG~G~G~--~~~~l~~~---~~~~v~~~D~s~~~~~~a~~~~~~~-~~~~~~~~~~~d~~~ 104 (219)
T 3dlc_A 31 IIAENIINRFGITAGTCIDIGSGPGA--LSIALAKQ---SDFSIRALDFSKHMNEIALKNIADA-NLNDRIQIVQGDVHN 104 (219)
T ss_dssp HHHHHHHHHHCCCEEEEEEETCTTSH--HHHHHHHH---SEEEEEEEESCHHHHHHHHHHHHHT-TCTTTEEEEECBTTB
T ss_pred HHHHHHHHhcCCCCCEEEEECCCCCH--HHHHHHHc---CCCeEEEEECCHHHHHHHHHHHHhc-cccCceEEEEcCHHH
Confidence 3444444333 34499999999998 67777654 4679999999999999999999998 876 9999999976
Q ss_pred HhcC-CCCccEEEEeCCCcc---cHHHHHHh-ccCCCceEEEEeCCCC
Q 027409 107 VMGE-LKGVDFLVVDCTSKD---FARVLRFA-RFSNKGAVLAFKNAFQ 149 (223)
Q Consensus 107 vL~~-L~~fDfVFIDa~K~~---Y~~~f~~~-~~l~~GgvIV~DNvl~ 149 (223)
++- -+.||+|+....-.. ...+++.+ +.|+|||.++..+.+.
T Consensus 105 -~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 151 (219)
T 3dlc_A 105 -IPIEDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGFG 151 (219)
T ss_dssp -CSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred -CCCCcccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEeccC
Confidence 332 147999999865433 36677654 6779999988865443
No 81
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.26 E-value=2.5e-11 Score=101.93 Aligned_cols=112 Identities=13% Similarity=0.044 Sum_probs=86.9
Q ss_pred HHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHH
Q 027409 29 VAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEE 106 (223)
Q Consensus 29 ~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~e 106 (223)
+..+|..+.......+|||||||+|+ .++.++... .++++.+|+++++++.|++++++. |+. ++++.+|+.+
T Consensus 34 ~~~~l~~l~~~~~~~~vLDiG~G~G~--~~~~l~~~~---~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~~~~d~~~ 107 (257)
T 3f4k_A 34 TRKAVSFINELTDDAKIADIGCGTGG--QTLFLADYV---KGQITGIDLFPDFIEIFNENAVKA-NCADRVKGITGSMDN 107 (257)
T ss_dssp HHHHHTTSCCCCTTCEEEEETCTTSH--HHHHHHHHC---CSEEEEEESCHHHHHHHHHHHHHT-TCTTTEEEEECCTTS
T ss_pred HHHHHHHHhcCCCCCeEEEeCCCCCH--HHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHHc-CCCCceEEEECChhh
Confidence 44455555555667899999999998 777777543 249999999999999999999999 987 9999999954
Q ss_pred HhcCC-CCccEEEEeCCCc--ccHHHHHHh-ccCCCceEEEEeCC
Q 027409 107 VMGEL-KGVDFLVVDCTSK--DFARVLRFA-RFSNKGAVLAFKNA 147 (223)
Q Consensus 107 vL~~L-~~fDfVFIDa~K~--~Y~~~f~~~-~~l~~GgvIV~DNv 147 (223)
++-- +.||+|+....-. +...+++.+ +.|+|||.++....
T Consensus 108 -~~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~ 151 (257)
T 3f4k_A 108 -LPFQNEELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSEA 151 (257)
T ss_dssp -CSSCTTCEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred -CCCCCCCEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 3422 4799999875433 367777755 66799999888764
No 82
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.26 E-value=1.8e-11 Score=106.23 Aligned_cols=117 Identities=11% Similarity=0.091 Sum_probs=91.1
Q ss_pred cHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEecch
Q 027409 26 ESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVRQA 104 (223)
Q Consensus 26 ~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~GdA 104 (223)
+.....++..++......+|||+|||.|. .|+.+|.. .+..++|+.+|+++++++.+++++++. |+. ++++.+|+
T Consensus 68 qd~~s~l~~~~l~~~~g~~VLDlgaG~G~--~t~~la~~-~~~~~~v~avD~~~~~l~~~~~~~~~~-g~~~v~~~~~D~ 143 (274)
T 3ajd_A 68 QSISSMIPPIVLNPREDDFILDMCAAPGG--KTTHLAQL-MKNKGTIVAVEISKTRTKALKSNINRM-GVLNTIIINADM 143 (274)
T ss_dssp CCSGGGHHHHHHCCCTTCEEEETTCTTCH--HHHHHHHH-TTTCSEEEEEESCHHHHHHHHHHHHHT-TCCSEEEEESCH
T ss_pred eCHHHHHHHHHhCCCCcCEEEEeCCCccH--HHHHHHHH-cCCCCEEEEECCCHHHHHHHHHHHHHh-CCCcEEEEeCCh
Confidence 33445566666666677899999999998 77777753 333489999999999999999999999 997 99999999
Q ss_pred HHHhcC----CCCccEEEEeCCC---------------------cccHHHHHHh-ccCCCceEEEEeC
Q 027409 105 EEVMGE----LKGVDFLVVDCTS---------------------KDFARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 105 ~evL~~----L~~fDfVFIDa~K---------------------~~Y~~~f~~~-~~l~~GgvIV~DN 146 (223)
.+.... -+.||.|++|+-- ..+.++++.+ +.++|||.+|...
T Consensus 144 ~~~~~~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~st 211 (274)
T 3ajd_A 144 RKYKDYLLKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYST 211 (274)
T ss_dssp HHHHHHHHHTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HhcchhhhhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 986542 3479999999432 3456777744 6779999988865
No 83
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.26 E-value=1.4e-11 Score=103.31 Aligned_cols=116 Identities=9% Similarity=0.027 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHHhc----CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEe
Q 027409 27 SGVAELLSAMAAGW----NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIV 101 (223)
Q Consensus 27 p~~g~fL~~L~~~~----~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~ 101 (223)
+.+..|+..++... ++.+|||||||+|. .+++|+.. ..++++.+|+++++++.|++++... |.. ++++.
T Consensus 61 ~~~~~~~~~l~~~~~~~~~~~~vLDiGcG~G~--~~~~l~~~---~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~~ 134 (241)
T 2ex4_A 61 NSSRKFLQRFLREGPNKTGTSCALDCGAGIGR--ITKRLLLP---LFREVDMVDITEDFLVQAKTYLGEE-GKRVRNYFC 134 (241)
T ss_dssp HHHHHHHHGGGC----CCCCSEEEEETCTTTH--HHHHTTTT---TCSEEEEEESCHHHHHHHHHHTGGG-GGGEEEEEE
T ss_pred HhHHHHHHHHHHhcccCCCCCEEEEECCCCCH--HHHHHHHh---cCCEEEEEeCCHHHHHHHHHHhhhc-CCceEEEEE
Confidence 45677887777655 57899999999998 66665432 2469999999999999999999887 655 99999
Q ss_pred cchHHHhcCCCCccEEEEeCCCcc-----cHHHHHHh-ccCCCceEEEE-eCCC
Q 027409 102 RQAEEVMGELKGVDFLVVDCTSKD-----FARVLRFA-RFSNKGAVLAF-KNAF 148 (223)
Q Consensus 102 GdA~evL~~L~~fDfVFIDa~K~~-----Y~~~f~~~-~~l~~GgvIV~-DNvl 148 (223)
+|+.+....-+.||+|+.+..-.. +..++..+ +.|+|||.+++ |+..
T Consensus 135 ~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 188 (241)
T 2ex4_A 135 CGLQDFTPEPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMA 188 (241)
T ss_dssp CCGGGCCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred cChhhcCCCCCCEEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccC
Confidence 998764322247999999965332 45677654 66788888776 5544
No 84
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.25 E-value=3.3e-11 Score=102.53 Aligned_cols=113 Identities=16% Similarity=0.079 Sum_probs=86.3
Q ss_pred HHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHH
Q 027409 29 VAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEE 106 (223)
Q Consensus 29 ~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~e 106 (223)
....|..+.......+|||||||+|+ .++.++.. ++++++.+|+++++++.|+++++.. |+. |+++.+|+.+
T Consensus 34 ~~~~l~~l~~~~~~~~vLDiGcG~G~--~~~~la~~---~~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~v~~~~~d~~~ 107 (267)
T 3kkz_A 34 TLKALSFIDNLTEKSLIADIGCGTGG--QTMVLAGH---VTGQVTGLDFLSGFIDIFNRNARQS-GLQNRVTGIVGSMDD 107 (267)
T ss_dssp HHHHHTTCCCCCTTCEEEEETCTTCH--HHHHHHTT---CSSEEEEEESCHHHHHHHHHHHHHT-TCTTTEEEEECCTTS
T ss_pred HHHHHHhcccCCCCCEEEEeCCCCCH--HHHHHHhc---cCCEEEEEeCCHHHHHHHHHHHHHc-CCCcCcEEEEcChhh
Confidence 34444444445568899999999998 77777642 4679999999999999999999999 987 9999999966
Q ss_pred HhcC-CCCccEEEEeCCCc--ccHHHHHHh-ccCCCceEEEEeCCC
Q 027409 107 VMGE-LKGVDFLVVDCTSK--DFARVLRFA-RFSNKGAVLAFKNAF 148 (223)
Q Consensus 107 vL~~-L~~fDfVFIDa~K~--~Y~~~f~~~-~~l~~GgvIV~DNvl 148 (223)
++- -+.||+|+....-. +...+++.+ +.|+|||.++.-...
T Consensus 108 -~~~~~~~fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 152 (267)
T 3kkz_A 108 -LPFRNEELDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSECS 152 (267)
T ss_dssp -CCCCTTCEEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEEEE
T ss_pred -CCCCCCCEEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEEee
Confidence 332 24799999865422 456777755 567999999887653
No 85
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.24 E-value=6.6e-11 Score=95.11 Aligned_cols=101 Identities=11% Similarity=-0.024 Sum_probs=80.2
Q ss_pred HHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEecchHHHhcCCCCc
Q 027409 36 MAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVRQAEEVMGELKGV 114 (223)
Q Consensus 36 L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~GdA~evL~~L~~f 114 (223)
++...++.+|||||||.|. .+++++.. +.+++.+|.++++++.|+++++.. ++. ++++.+|+.+.-. -+.|
T Consensus 27 ~~~~~~~~~vLdiG~G~G~--~~~~l~~~----~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~~~d~~~~~~-~~~~ 98 (199)
T 2xvm_A 27 AVKVVKPGKTLDLGCGNGR--NSLYLAAN----GYDVDAWDKNAMSIANVERIKSIE-NLDNLHTRVVDLNNLTF-DRQY 98 (199)
T ss_dssp HTTTSCSCEEEEETCTTSH--HHHHHHHT----TCEEEEEESCHHHHHHHHHHHHHH-TCTTEEEEECCGGGCCC-CCCE
T ss_pred HhhccCCCeEEEEcCCCCH--HHHHHHHC----CCeEEEEECCHHHHHHHHHHHHhC-CCCCcEEEEcchhhCCC-CCCc
Confidence 3455678899999999998 67677643 569999999999999999999998 886 9999999987422 3579
Q ss_pred cEEEEeCC-----CcccHHHHHHh-ccCCCceEEEE
Q 027409 115 DFLVVDCT-----SKDFARVLRFA-RFSNKGAVLAF 144 (223)
Q Consensus 115 DfVFIDa~-----K~~Y~~~f~~~-~~l~~GgvIV~ 144 (223)
|+|+.... .++...+++.+ +.++|||.++.
T Consensus 99 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~ 134 (199)
T 2xvm_A 99 DFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLI 134 (199)
T ss_dssp EEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEE
T ss_pred eEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 99998753 33566778755 67799998543
No 86
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.24 E-value=8.3e-11 Score=98.67 Aligned_cols=110 Identities=10% Similarity=0.036 Sum_probs=84.5
Q ss_pred HHHHHHHHHHhc---CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchH
Q 027409 29 VAELLSAMAAGW---NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAE 105 (223)
Q Consensus 29 ~g~fL~~L~~~~---~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~ 105 (223)
..+++..++... ++++|||||||+|. .++.|+.. +.+++.+|+++++++.|++++... |..++++.+|+.
T Consensus 26 ~~~~~~~~~~~~~~~~~~~vLDlGcG~G~--~~~~l~~~----~~~v~gvD~s~~~l~~a~~~~~~~-~~~v~~~~~d~~ 98 (252)
T 1wzn_A 26 EIDFVEEIFKEDAKREVRRVLDLACGTGI--PTLELAER----GYEVVGLDLHEEMLRVARRKAKER-NLKIEFLQGDVL 98 (252)
T ss_dssp HHHHHHHHHHHTCSSCCCEEEEETCTTCH--HHHHHHHT----TCEEEEEESCHHHHHHHHHHHHHT-TCCCEEEESCGG
T ss_pred HHHHHHHHHHHhcccCCCEEEEeCCCCCH--HHHHHHHC----CCeEEEEECCHHHHHHHHHHHHhc-CCceEEEECChh
Confidence 456666666553 45899999999998 67677642 579999999999999999999998 878999999998
Q ss_pred HHhcCCCCccEEEEeCCCc------ccHHHHHHh-ccCCCceEEEEeC
Q 027409 106 EVMGELKGVDFLVVDCTSK------DFARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 106 evL~~L~~fDfVFIDa~K~------~Y~~~f~~~-~~l~~GgvIV~DN 146 (223)
+. +.-++||+|++...-. +...+++.+ +.|+|||+++.|-
T Consensus 99 ~~-~~~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 99 EI-AFKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp GC-CCCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hc-ccCCCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEec
Confidence 74 2125799999864322 345666644 5679999999873
No 87
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=99.24 E-value=2e-11 Score=107.45 Aligned_cols=144 Identities=17% Similarity=0.058 Sum_probs=93.4
Q ss_pred HHHHh--cCCCeEEEEccCcchHHHHHHHHHh--c---CCCCcEEEEEe-----CCch----------------------
Q 027409 35 AMAAG--WNAKLIVEAWTHGGPITTSIGLAIA--A---RHTCARHVCIV-----PDER---------------------- 80 (223)
Q Consensus 35 ~L~~~--~~ak~ILEIGT~~Gys~Stl~la~A--~---~~~~g~i~TIE-----~d~e---------------------- 80 (223)
.|.+. .-|..|+|+|+.-|- |++.+|.. . ..++.+|+..| +.+.
T Consensus 61 ~l~~~i~~vpG~ivE~GV~rG~--S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~ 138 (257)
T 3tos_A 61 ALYRQVLDVPGVIMEFGVRFGR--HLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPA 138 (257)
T ss_dssp HHHHHTTTSCSEEEEECCTTCH--HHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHH
T ss_pred HHHHHhhCCCCeEEEEecccCH--HHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHH
Confidence 44444 679999999999997 55554421 1 13467899988 4321
Q ss_pred HHH---HHHHHHHhhcCc--e-EEEEecchHHHhcCC------CCccEEEEeCCC-cccHHHHHHhcc-CCCceEEEEeC
Q 027409 81 SRL---AYVKAMYDVVGW--V-SEVIVRQAEEVMGEL------KGVDFLVVDCTS-KDFARVLRFARF-SNKGAVLAFKN 146 (223)
Q Consensus 81 ~~~---~Ar~~~~~a~G~--~-I~li~GdA~evL~~L------~~fDfVFIDa~K-~~Y~~~f~~~~~-l~~GgvIV~DN 146 (223)
..+ .+++++++. |+ . |+++.|++.++|+.+ .+|||||||+++ +.|..+|+.+.+ +++||+||+||
T Consensus 139 ~l~~~l~~~~~~~~~-g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~Y~~t~~~le~~~p~l~~GGvIv~DD 217 (257)
T 3tos_A 139 YLKEVLDAHECSDFF-GHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDLYEPTKAVLEAIRPYLTKGSIVAFDE 217 (257)
T ss_dssp HHHHHHHHHHTTSTT-TTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCCHHHHHHHHHHHGGGEEEEEEEEESS
T ss_pred HHHHHHHHHhhhhhc-CCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcccchHHHHHHHHHHHhCCCcEEEEcC
Confidence 111 123344456 76 3 999999999999874 259999999998 566778887755 59999999999
Q ss_pred CC---CCCccccccccccccccCCCceEEEEeecCCceEEEEE
Q 027409 147 AF---QRSTSGLRWQGQGVLDRGTRVVRSVFLPVGQGLDIVHV 186 (223)
Q Consensus 147 vl---~~g~~~~~~~~r~~v~~~~~~~~t~lLPiGDGl~vs~k 186 (223)
.- |.|+. .++.. .+.+ .++.-..+|.+.+....+.
T Consensus 218 ~~~~~w~G~~-~A~~e--f~~~--~~~~i~~~p~~~~~~y~~~ 255 (257)
T 3tos_A 218 LDNPKWPGEN-IAMRK--VLGL--DHAPLRLLPGRPAPAYLRW 255 (257)
T ss_dssp TTCTTCTHHH-HHHHH--HTCT--TSSCCEECTTCSCCEEEET
T ss_pred CCCCCChHHH-HHHHH--HHhh--CCCeEEEccCCCCCEEEEe
Confidence 74 33431 12222 2221 2245556777777665543
No 88
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.24 E-value=4.4e-11 Score=110.26 Aligned_cols=106 Identities=13% Similarity=0.136 Sum_probs=85.5
Q ss_pred HHHhcC-CCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC-CC
Q 027409 36 MAAGWN-AKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL-KG 113 (223)
Q Consensus 36 L~~~~~-ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L-~~ 113 (223)
+....+ .++||++|||+|. .++.+|.. +++|+++|+++++++.|++|++.. |+..++..+|+.+.++.+ +.
T Consensus 208 l~~~~~~g~~VLDlg~GtG~--~sl~~a~~----ga~V~avDis~~al~~a~~n~~~n-g~~~~~~~~D~~~~l~~~~~~ 280 (393)
T 4dmg_A 208 FEAMVRPGERVLDVYSYVGG--FALRAARK----GAYALAVDKDLEALGVLDQAALRL-GLRVDIRHGEALPTLRGLEGP 280 (393)
T ss_dssp HHTTCCTTCEEEEESCTTTH--HHHHHHHT----TCEEEEEESCHHHHHHHHHHHHHH-TCCCEEEESCHHHHHHTCCCC
T ss_pred HHHHhcCCCeEEEcccchhH--HHHHHHHc----CCeEEEEECCHHHHHHHHHHHHHh-CCCCcEEEccHHHHHHHhcCC
Confidence 334445 7899999999997 77777642 456999999999999999999999 888667799999999876 35
Q ss_pred ccEEEEeCCC------------cccHHHHHHh-ccCCCceEEE-EeCCC
Q 027409 114 VDFLVVDCTS------------KDFARVLRFA-RFSNKGAVLA-FKNAF 148 (223)
Q Consensus 114 fDfVFIDa~K------------~~Y~~~f~~~-~~l~~GgvIV-~DNvl 148 (223)
||+|++|.-. ..|.++++.+ +.++|||+++ +.+-.
T Consensus 281 fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~ 329 (393)
T 4dmg_A 281 FHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSY 329 (393)
T ss_dssp EEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 9999999754 4667777644 6779999998 66544
No 89
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.24 E-value=3.1e-11 Score=110.72 Aligned_cols=113 Identities=17% Similarity=0.152 Sum_probs=91.5
Q ss_pred CcHHHHHHHHHHHHhc-----CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEE
Q 027409 25 KESGVAELLSAMAAGW-----NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEV 99 (223)
Q Consensus 25 i~p~~g~fL~~L~~~~-----~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~l 99 (223)
+.+.+..++..+.... ...+|||+|||+|+ .+++++.. +.+|+.+|+|++.++.|++|++.. |+.+++
T Consensus 212 ~d~~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~--~~~~la~~----g~~V~gvDis~~al~~A~~n~~~~-~~~v~~ 284 (381)
T 3dmg_A 212 VDPASLLLLEALQERLGPEGVRGRQVLDLGAGYGA--LTLPLARM----GAEVVGVEDDLASVLSLQKGLEAN-ALKAQA 284 (381)
T ss_dssp CCHHHHHHHHHHHHHHCTTTTTTCEEEEETCTTST--THHHHHHT----TCEEEEEESBHHHHHHHHHHHHHT-TCCCEE
T ss_pred CCHHHHHHHHHHHHhhcccCCCCCEEEEEeeeCCH--HHHHHHHc----CCEEEEEECCHHHHHHHHHHHHHc-CCCeEE
Confidence 5677788888887754 56799999999998 77777643 569999999999999999999998 888999
Q ss_pred EecchHHHhcCCCCccEEEEeCC--------CcccHHHHHHh-ccCCCceEEEE
Q 027409 100 IVRQAEEVMGELKGVDFLVVDCT--------SKDFARVLRFA-RFSNKGAVLAF 144 (223)
Q Consensus 100 i~GdA~evL~~L~~fDfVFIDa~--------K~~Y~~~f~~~-~~l~~GgvIV~ 144 (223)
+.+|+.+.+..-+.||+|+.+.- .+.+..+++.+ +.|+|||.++.
T Consensus 285 ~~~D~~~~~~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~i 338 (381)
T 3dmg_A 285 LHSDVDEALTEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFL 338 (381)
T ss_dssp EECSTTTTSCTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEcchhhccccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEE
Confidence 99999987665458999999832 34456777654 66788888776
No 90
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.23 E-value=4.9e-11 Score=98.69 Aligned_cols=111 Identities=8% Similarity=0.066 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHHhc--CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecch
Q 027409 27 SGVAELLSAMAAGW--NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQA 104 (223)
Q Consensus 27 p~~g~fL~~L~~~~--~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA 104 (223)
....+++..++... ++.+|||||||+|. .+..++.. +.+++.+|+++++++.|++++... +..++++.+|+
T Consensus 21 ~~~~~~~~~~l~~~~~~~~~vLdiG~G~G~--~~~~l~~~----~~~~~~~D~s~~~~~~a~~~~~~~-~~~~~~~~~d~ 93 (246)
T 1y8c_A 21 KKWSDFIIEKCVENNLVFDDYLDLACGTGN--LTENLCPK----FKNTWAVDLSQEMLSEAENKFRSQ-GLKPRLACQDI 93 (246)
T ss_dssp HHHHHHHHHHHHTTTCCTTEEEEETCTTST--THHHHGGG----SSEEEEECSCHHHHHHHHHHHHHT-TCCCEEECCCG
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEeCCCCCH--HHHHHHHC----CCcEEEEECCHHHHHHHHHHHhhc-CCCeEEEeccc
Confidence 44556666666655 77899999999998 66666532 568999999999999999999988 77799999999
Q ss_pred HHHhcCCCCccEEEEeCC-------CcccHHHHHHh-ccCCCceEEEEe
Q 027409 105 EEVMGELKGVDFLVVDCT-------SKDFARVLRFA-RFSNKGAVLAFK 145 (223)
Q Consensus 105 ~evL~~L~~fDfVFIDa~-------K~~Y~~~f~~~-~~l~~GgvIV~D 145 (223)
.+.... +.||+|+...+ .++...++..+ +.|+|||.++++
T Consensus 94 ~~~~~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 94 SNLNIN-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp GGCCCS-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred ccCCcc-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 874322 68999999761 13455666655 567999999985
No 91
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.22 E-value=1e-10 Score=100.77 Aligned_cols=117 Identities=10% Similarity=0.089 Sum_probs=93.2
Q ss_pred CCcHHHHHHHHHHHHhc--CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEE
Q 027409 24 IKESGVAELLSAMAAGW--NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVI 100 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~--~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li 100 (223)
+..|++..++..++... +..+|||||||+|. .++.++... ++++++.+|+++++++.|++|.++. |+. ++++
T Consensus 90 ipr~~te~l~~~~l~~~~~~~~~vLDlG~GsG~--~~~~la~~~--~~~~v~~vD~s~~~l~~a~~n~~~~-~~~~v~~~ 164 (276)
T 2b3t_A 90 IPRPDTECLVEQALARLPEQPCRILDLGTGTGA--IALALASER--PDCEIIAVDRMPDAVSLAQRNAQHL-AIKNIHIL 164 (276)
T ss_dssp CCCTTHHHHHHHHHHHSCSSCCEEEEETCTTSH--HHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHH-TCCSEEEE
T ss_pred ccCchHHHHHHHHHHhcccCCCEEEEecCCccH--HHHHHHHhC--CCCEEEEEECCHHHHHHHHHHHHHc-CCCceEEE
Confidence 44678888888887764 57799999999998 666776432 4689999999999999999999999 987 9999
Q ss_pred ecchHHHhcCCCCccEEEEeCC-----------------C-----------cccHHHHHHh-ccCCCceEEEEeC
Q 027409 101 VRQAEEVMGELKGVDFLVVDCT-----------------S-----------KDFARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 101 ~GdA~evL~~L~~fDfVFIDa~-----------------K-----------~~Y~~~f~~~-~~l~~GgvIV~DN 146 (223)
.||+.+.++. +.||+|+.+.- + ..|..+++.+ +.++|||.+++..
T Consensus 165 ~~d~~~~~~~-~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~ 238 (276)
T 2b3t_A 165 QSDWFSALAG-QQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEH 238 (276)
T ss_dssp CCSTTGGGTT-CCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred Ecchhhhccc-CCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 9999886642 47999999720 0 3466777655 5679999998864
No 92
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.22 E-value=1.3e-11 Score=103.44 Aligned_cols=110 Identities=12% Similarity=0.070 Sum_probs=84.4
Q ss_pred HHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHH
Q 027409 29 VAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEE 106 (223)
Q Consensus 29 ~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~e 106 (223)
...++..+.......+|||+|||+|+ .++.+|.. +++|+.+|+++++++.|+++++.. |+. ++++.||+.+
T Consensus 66 ~~~l~~~~~~~~~~~~vLD~gcG~G~--~~~~la~~----~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~~~~d~~~ 138 (241)
T 3gdh_A 66 AEHIAGRVSQSFKCDVVVDAFCGVGG--NTIQFALT----GMRVIAIDIDPVKIALARNNAEVY-GIADKIEFICGDFLL 138 (241)
T ss_dssp HHHHHHHHHHHSCCSEEEETTCTTSH--HHHHHHHT----TCEEEEEESCHHHHHHHHHHHHHT-TCGGGEEEEESCHHH
T ss_pred HHHHHHHhhhccCCCEEEECccccCH--HHHHHHHc----CCEEEEEECCHHHHHHHHHHHHHc-CCCcCeEEEECChHH
Confidence 34444555555688999999999998 77777643 589999999999999999999999 983 9999999999
Q ss_pred HhcCCCCccEEEEeCCCcccHH---HH-HHhccCCCceEEEEeC
Q 027409 107 VMGELKGVDFLVVDCTSKDFAR---VL-RFARFSNKGAVLAFKN 146 (223)
Q Consensus 107 vL~~L~~fDfVFIDa~K~~Y~~---~f-~~~~~l~~GgvIV~DN 146 (223)
..+. ..||+|+.|..-..... .+ +..+.++|||+++.+.
T Consensus 139 ~~~~-~~~D~v~~~~~~~~~~~~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 139 LASF-LKADVVFLSPPWGGPDYATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp HGGG-CCCSEEEECCCCSSGGGGGSSSBCTTTSCSSCHHHHHHH
T ss_pred hccc-CCCCEEEECCCcCCcchhhhHHHHHHhhcCCcceeHHHH
Confidence 7643 47999999964332211 22 2335679999988775
No 93
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.22 E-value=1.2e-10 Score=104.84 Aligned_cols=104 Identities=13% Similarity=0.063 Sum_probs=83.6
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce---EEEEecchHHHhcCC----CC
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV---SEVIVRQAEEVMGEL----KG 113 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~---I~li~GdA~evL~~L----~~ 113 (223)
+.++||++|||+|. .++.+|.. +.+|+.+|.++++++.|++|++.. |+. ++++.+|+.+.++.+ ..
T Consensus 153 ~~~~VLDlgcGtG~--~sl~la~~----ga~V~~VD~s~~al~~a~~n~~~~-gl~~~~v~~i~~D~~~~l~~~~~~~~~ 225 (332)
T 2igt_A 153 RPLKVLNLFGYTGV--ASLVAAAA----GAEVTHVDASKKAIGWAKENQVLA-GLEQAPIRWICEDAMKFIQREERRGST 225 (332)
T ss_dssp SCCEEEEETCTTCH--HHHHHHHT----TCEEEEECSCHHHHHHHHHHHHHH-TCTTSCEEEECSCHHHHHHHHHHHTCC
T ss_pred CCCcEEEcccccCH--HHHHHHHc----CCEEEEEECCHHHHHHHHHHHHHc-CCCccceEEEECcHHHHHHHHHhcCCC
Confidence 46799999999998 77777642 459999999999999999999998 875 999999999988653 47
Q ss_pred ccEEEEeCCC-------------cccHHHHHHh-ccCCCceEEEEeCCCCCC
Q 027409 114 VDFLVVDCTS-------------KDFARVLRFA-RFSNKGAVLAFKNAFQRS 151 (223)
Q Consensus 114 fDfVFIDa~K-------------~~Y~~~f~~~-~~l~~GgvIV~DNvl~~g 151 (223)
||+|++|.-. ..|.++++.+ +.|+|||++++.+.....
T Consensus 226 fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~ 277 (332)
T 2igt_A 226 YDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIR 277 (332)
T ss_dssp BSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTT
T ss_pred ceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCC
Confidence 9999998642 2367777654 678999997776655433
No 94
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.22 E-value=1.1e-10 Score=100.33 Aligned_cols=99 Identities=19% Similarity=0.138 Sum_probs=79.2
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCC-CCccEE
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGEL-KGVDFL 117 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L-~~fDfV 117 (223)
++.+|||||||+|+ .+.+++.. +.+++.+|+++++++.|+++++.. |+. ++++.+|+.+..+.. +.||+|
T Consensus 68 ~~~~vLDiGcG~G~--~~~~l~~~----~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~v~~~~~d~~~~~~~~~~~fD~v 140 (285)
T 4htf_A 68 QKLRVLDAGGGEGQ--TAIKMAER----GHQVILCDLSAQMIDRAKQAAEAK-GVSDNMQFIHCAAQDVASHLETPVDLI 140 (285)
T ss_dssp SCCEEEEETCTTCH--HHHHHHHT----TCEEEEEESCHHHHHHHHHHHHC--CCGGGEEEEESCGGGTGGGCSSCEEEE
T ss_pred CCCEEEEeCCcchH--HHHHHHHC----CCEEEEEECCHHHHHHHHHHHHhc-CCCcceEEEEcCHHHhhhhcCCCceEE
Confidence 35699999999998 77777643 679999999999999999999998 985 999999998865333 589999
Q ss_pred EEeCCCc---ccHHHHHHh-ccCCCceEEEEeC
Q 027409 118 VVDCTSK---DFARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 118 FIDa~K~---~Y~~~f~~~-~~l~~GgvIV~DN 146 (223)
+....-. +...+++.+ +.|+|||.++...
T Consensus 141 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (285)
T 4htf_A 141 LFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMF 173 (285)
T ss_dssp EEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EECchhhcccCHHHHHHHHHHHcCCCeEEEEEE
Confidence 9986543 346677655 6779999998754
No 95
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.22 E-value=1.8e-11 Score=105.60 Aligned_cols=110 Identities=16% Similarity=0.113 Sum_probs=85.5
Q ss_pred HHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHh---hcCce--EEEEecch
Q 027409 30 AELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYD---VVGWV--SEVIVRQA 104 (223)
Q Consensus 30 g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~---a~G~~--I~li~GdA 104 (223)
+-+|..++...+..+|||+|||+|. .++.+|.. .++++|+.+|+++++++.|++|++. . |+. ++++.+|+
T Consensus 25 ~~lL~~~~~~~~~~~VLDlG~G~G~--~~l~la~~--~~~~~v~gvDi~~~~~~~a~~n~~~~~~~-~l~~~v~~~~~D~ 99 (260)
T 2ozv_A 25 AMLLASLVADDRACRIADLGAGAGA--AGMAVAAR--LEKAEVTLYERSQEMAEFARRSLELPDNA-AFSARIEVLEADV 99 (260)
T ss_dssp HHHHHHTCCCCSCEEEEECCSSSSH--HHHHHHHH--CTTEEEEEEESSHHHHHHHHHHTTSGGGT-TTGGGEEEEECCT
T ss_pred HHHHHHHhcccCCCEEEEeCChHhH--HHHHHHHh--CCCCeEEEEECCHHHHHHHHHHHHhhhhC-CCcceEEEEeCCH
Confidence 3455555556677899999999998 67777643 3468999999999999999999998 8 887 99999999
Q ss_pred HHHhc-----CC--CCccEEEEeC---------------------CCcccHHHHHHh-ccCCCceEEEE
Q 027409 105 EEVMG-----EL--KGVDFLVVDC---------------------TSKDFARVLRFA-RFSNKGAVLAF 144 (223)
Q Consensus 105 ~evL~-----~L--~~fDfVFIDa---------------------~K~~Y~~~f~~~-~~l~~GgvIV~ 144 (223)
.+.++ .+ +.||+|+.+. ....+..+++.+ +.|+|||.+++
T Consensus 100 ~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~ 168 (260)
T 2ozv_A 100 TLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSL 168 (260)
T ss_dssp TCCHHHHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEE
T ss_pred HHHhhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEE
Confidence 88643 23 4799999981 123467778755 67799998876
No 96
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.21 E-value=2.1e-10 Score=99.59 Aligned_cols=116 Identities=10% Similarity=-0.024 Sum_probs=91.3
Q ss_pred CcHHHHHHHHHHHHhc---CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEE
Q 027409 25 KESGVAELLSAMAAGW---NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEV 99 (223)
Q Consensus 25 i~p~~g~fL~~L~~~~---~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~l 99 (223)
+...+-+.+..++... ...+|||||||+|. .++.++... +++++.+|+++++++.|++++++. |+. |++
T Consensus 53 l~~a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~--~~~~la~~~---~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~v~~ 126 (302)
T 3hem_A 53 LEEAQYAKRKLALDKLNLEPGMTLLDIGCGWGS--TMRHAVAEY---DVNVIGLTLSENQYAHDKAMFDEV-DSPRRKEV 126 (302)
T ss_dssp HHHHHHHHHHHHHHTTCCCTTCEEEEETCTTSH--HHHHHHHHH---CCEEEEEECCHHHHHHHHHHHHHS-CCSSCEEE
T ss_pred HHHHHHHHHHHHHHHcCCCCcCEEEEeeccCcH--HHHHHHHhC---CCEEEEEECCHHHHHHHHHHHHhc-CCCCceEE
Confidence 3444556666666654 45599999999998 777776542 379999999999999999999998 887 999
Q ss_pred EecchHHHhcCCCCccEEEEeCC------------CcccHHHHHHh-ccCCCceEEEEeCCCC
Q 027409 100 IVRQAEEVMGELKGVDFLVVDCT------------SKDFARVLRFA-RFSNKGAVLAFKNAFQ 149 (223)
Q Consensus 100 i~GdA~evL~~L~~fDfVFIDa~------------K~~Y~~~f~~~-~~l~~GgvIV~DNvl~ 149 (223)
+.+|+.+. -+.||+|+.... ++++..+|+.+ +.|+|||.++......
T Consensus 127 ~~~d~~~~---~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 186 (302)
T 3hem_A 127 RIQGWEEF---DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITI 186 (302)
T ss_dssp EECCGGGC---CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEEC
T ss_pred EECCHHHc---CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEec
Confidence 99999875 258999998643 35567888755 6789999999876544
No 97
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.21 E-value=8.2e-11 Score=104.12 Aligned_cols=103 Identities=11% Similarity=0.014 Sum_probs=79.1
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHh---hcCce-EEEEecchHHHhcCC--CC
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYD---VVGWV-SEVIVRQAEEVMGEL--KG 113 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~---a~G~~-I~li~GdA~evL~~L--~~ 113 (223)
.++++|||||||.|. .+..++. ..+.++|+.+|+|++.++.|++++.. ..... ++++.||+.+.+... +.
T Consensus 94 ~~~~~VLdiG~G~G~--~~~~l~~--~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~ 169 (304)
T 3bwc_A 94 PKPERVLIIGGGDGG--VLREVLR--HGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNT 169 (304)
T ss_dssp SSCCEEEEEECTTSH--HHHHHHT--CTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTC
T ss_pred CCCCeEEEEcCCCCH--HHHHHHh--CCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCc
Confidence 578999999999997 6666653 33467999999999999999999853 20122 999999999988652 47
Q ss_pred ccEEEEeCCC------ccc-HHHHHHh-ccCCCceEEEEeC
Q 027409 114 VDFLVVDCTS------KDF-ARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 114 fDfVFIDa~K------~~Y-~~~f~~~-~~l~~GgvIV~DN 146 (223)
||+|++|..- ..| .++|+.+ +.|+|||++++..
T Consensus 170 fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 210 (304)
T 3bwc_A 170 YDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQG 210 (304)
T ss_dssp EEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 9999999842 222 5778765 5679999999863
No 98
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.21 E-value=2.9e-11 Score=104.45 Aligned_cols=127 Identities=12% Similarity=0.043 Sum_probs=83.3
Q ss_pred HHHHhhcccCCCCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhh
Q 027409 13 AYIDTVKSCENIKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDV 92 (223)
Q Consensus 13 ayl~~l~~~~~ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a 92 (223)
+|.........++.|...+++..++......+|||+|||.|. .++.++... .++++++.+|+++++++.|++++++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VLD~G~G~G~--~~~~la~~~-~~~~~v~~vD~s~~~~~~a~~~~~~~ 158 (275)
T 1yb2_A 82 YFGRVIRRNTQIISEIDASYIIMRCGLRPGMDILEVGVGSGN--MSSYILYAL-NGKGTLTVVERDEDNLKKAMDNLSEF 158 (275)
T ss_dssp GHHHHC------------------CCCCTTCEEEEECCTTSH--HHHHHHHHH-TTSSEEEEECSCHHHHHHHHHHHHTT
T ss_pred HHHhhccccccccChhhHHHHHHHcCCCCcCEEEEecCCCCH--HHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHHHhc
Confidence 344443333445666555666666666777899999999998 777777543 34689999999999999999999863
Q ss_pred cCce-EEEEecchHHHhcCCCCccEEEEeCCCcccHHHHHHh-ccCCCceEEEEe
Q 027409 93 VGWV-SEVIVRQAEEVMGELKGVDFLVVDCTSKDFARVLRFA-RFSNKGAVLAFK 145 (223)
Q Consensus 93 ~G~~-I~li~GdA~evL~~L~~fDfVFIDa~K~~Y~~~f~~~-~~l~~GgvIV~D 145 (223)
.|.. ++++.+|+.+.++. +.||+|++|.. +...+++.+ +.++|||.++.-
T Consensus 159 ~g~~~v~~~~~d~~~~~~~-~~fD~Vi~~~~--~~~~~l~~~~~~LkpgG~l~i~ 210 (275)
T 1yb2_A 159 YDIGNVRTSRSDIADFISD-QMYDAVIADIP--DPWNHVQKIASMMKPGSVATFY 210 (275)
T ss_dssp SCCTTEEEECSCTTTCCCS-CCEEEEEECCS--CGGGSHHHHHHTEEEEEEEEEE
T ss_pred CCCCcEEEEECchhccCcC-CCccEEEEcCc--CHHHHHHHHHHHcCCCCEEEEE
Confidence 2555 99999999884432 47999999764 456778755 567899977663
No 99
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.21 E-value=2e-10 Score=100.85 Aligned_cols=114 Identities=16% Similarity=0.143 Sum_probs=88.8
Q ss_pred CCcHHHHHHHHHHHHhc---CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EE
Q 027409 24 IKESGVAELLSAMAAGW---NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SE 98 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~---~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~ 98 (223)
+..|++..++..++... ...+|||+|||+|. .++++|.. ++.+++.+|++++.++.|++|.++. |+. |+
T Consensus 103 ipr~~te~lv~~~l~~~~~~~~~~vLDlG~GsG~--~~~~la~~---~~~~v~~vDis~~al~~A~~n~~~~-~l~~~v~ 176 (284)
T 1nv8_A 103 VPRPETEELVELALELIRKYGIKTVADIGTGSGA--IGVSVAKF---SDAIVFATDVSSKAVEIARKNAERH-GVSDRFF 176 (284)
T ss_dssp CCCTTHHHHHHHHHHHHHHHTCCEEEEESCTTSH--HHHHHHHH---SSCEEEEEESCHHHHHHHHHHHHHT-TCTTSEE
T ss_pred ecChhHHHHHHHHHHHhcccCCCEEEEEeCchhH--HHHHHHHC---CCCEEEEEECCHHHHHHHHHHHHHc-CCCCceE
Confidence 55677777777766543 55799999999998 67777654 5789999999999999999999998 986 99
Q ss_pred EEecchHHHhcCCCCc---cEEEEeCC--------Ccc--c------------HHHHH-Hh-ccCCCceEEEEe
Q 027409 99 VIVRQAEEVMGELKGV---DFLVVDCT--------SKD--F------------ARVLR-FA-RFSNKGAVLAFK 145 (223)
Q Consensus 99 li~GdA~evL~~L~~f---DfVFIDa~--------K~~--Y------------~~~f~-~~-~~l~~GgvIV~D 145 (223)
++.||+.+.++ +.| |+|+.+.- ... | ..++. .+ +.++|||.+++.
T Consensus 177 ~~~~D~~~~~~--~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e 248 (284)
T 1nv8_A 177 VRKGEFLEPFK--EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLME 248 (284)
T ss_dssp EEESSTTGGGG--GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEE
T ss_pred EEECcchhhcc--cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEE
Confidence 99999998765 368 99999720 000 1 14565 55 667999999975
No 100
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.21 E-value=1.2e-10 Score=100.14 Aligned_cols=105 Identities=10% Similarity=0.047 Sum_probs=82.8
Q ss_pred HHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcC
Q 027409 31 ELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGE 110 (223)
Q Consensus 31 ~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~ 110 (223)
.++..+ ...+..+|||||||+|+ .+++|+.. +.+++.+|++++.++.|+++++.. |+.++++.+|+.+...
T Consensus 111 ~~~~~~-~~~~~~~vLD~GcG~G~--~~~~l~~~----g~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~~d~~~~~~- 181 (286)
T 3m70_A 111 DVVDAA-KIISPCKVLDLGCGQGR--NSLYLSLL----GYDVTSWDHNENSIAFLNETKEKE-NLNISTALYDINAANI- 181 (286)
T ss_dssp HHHHHH-HHSCSCEEEEESCTTCH--HHHHHHHT----TCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCGGGCCC-
T ss_pred HHHHHh-hccCCCcEEEECCCCCH--HHHHHHHC----CCeEEEEECCHHHHHHHHHHHHHc-CCceEEEEeccccccc-
Confidence 444443 33488999999999998 77777643 569999999999999999999998 8889999999987433
Q ss_pred CCCccEEEEeC-----CCcccHHHHHHh-ccCCCceEEEE
Q 027409 111 LKGVDFLVVDC-----TSKDFARVLRFA-RFSNKGAVLAF 144 (223)
Q Consensus 111 L~~fDfVFIDa-----~K~~Y~~~f~~~-~~l~~GgvIV~ 144 (223)
-+.||+|+... .......+++.+ +.++|||+++.
T Consensus 182 ~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 221 (286)
T 3m70_A 182 QENYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLI 221 (286)
T ss_dssp CSCEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEE
T ss_pred cCCccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 35799999976 345566788755 67799998443
No 101
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.20 E-value=1.1e-10 Score=94.80 Aligned_cols=110 Identities=10% Similarity=-0.053 Sum_probs=82.6
Q ss_pred HHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcC
Q 027409 31 ELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGE 110 (223)
Q Consensus 31 ~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~ 110 (223)
++|..++...++.+|||||||+|. .+.+++.. +.+++.+|.++++++.|+++++.. |..++++.+|+.+.-..
T Consensus 19 ~~l~~~~~~~~~~~vLdiGcG~G~--~~~~l~~~----~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~~d~~~~~~~ 91 (202)
T 2kw5_A 19 DFLVSVANQIPQGKILCLAEGEGR--NACFLASL----GYEVTAVDQSSVGLAKAKQLAQEK-GVKITTVQSNLADFDIV 91 (202)
T ss_dssp SSHHHHHHHSCSSEEEECCCSCTH--HHHHHHTT----TCEEEEECSSHHHHHHHHHHHHHH-TCCEEEECCBTTTBSCC
T ss_pred HHHHHHHHhCCCCCEEEECCCCCH--hHHHHHhC----CCeEEEEECCHHHHHHHHHHHHhc-CCceEEEEcChhhcCCC
Confidence 455555555666699999999998 66666532 569999999999999999999998 88899999999774211
Q ss_pred CCCccEEEEeCC---CcccHHHHHHh-ccCCCceEEEEeCC
Q 027409 111 LKGVDFLVVDCT---SKDFARVLRFA-RFSNKGAVLAFKNA 147 (223)
Q Consensus 111 L~~fDfVFIDa~---K~~Y~~~f~~~-~~l~~GgvIV~DNv 147 (223)
-+.||+|+.-.. .++...++..+ +.++|||.+++...
T Consensus 92 ~~~fD~v~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 132 (202)
T 2kw5_A 92 ADAWEGIVSIFCHLPSSLRQQLYPKVYQGLKPGGVFILEGF 132 (202)
T ss_dssp TTTCSEEEEECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEE
T ss_pred cCCccEEEEEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 247999997432 22345666644 66799999988754
No 102
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.20 E-value=2.9e-11 Score=100.45 Aligned_cols=102 Identities=10% Similarity=-0.044 Sum_probs=79.6
Q ss_pred hcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCCCCccEEE
Q 027409 39 GWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGELKGVDFLV 118 (223)
Q Consensus 39 ~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L~~fDfVF 118 (223)
..++.+|||||||+|. .+..++... ++++++.+|+++++++.|++++... + .++++.+|+.+.... +.||+|+
T Consensus 42 ~~~~~~vLDiG~G~G~--~~~~l~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~-~-~~~~~~~d~~~~~~~-~~fD~v~ 114 (234)
T 3dtn_A 42 DTENPDILDLGAGTGL--LSAFLMEKY--PEATFTLVDMSEKMLEIAKNRFRGN-L-KVKYIEADYSKYDFE-EKYDMVV 114 (234)
T ss_dssp SCSSCEEEEETCTTSH--HHHHHHHHC--TTCEEEEEESCHHHHHHHHHHTCSC-T-TEEEEESCTTTCCCC-SCEEEEE
T ss_pred CCCCCeEEEecCCCCH--HHHHHHHhC--CCCeEEEEECCHHHHHHHHHhhccC-C-CEEEEeCchhccCCC-CCceEEE
Confidence 3467899999999998 676776543 4689999999999999999999877 6 699999999875444 6899999
Q ss_pred EeCCCcccH-----HHHHHh-ccCCCceEEEEeCC
Q 027409 119 VDCTSKDFA-----RVLRFA-RFSNKGAVLAFKNA 147 (223)
Q Consensus 119 IDa~K~~Y~-----~~f~~~-~~l~~GgvIV~DNv 147 (223)
....-.... .++..+ +.|+|||.++.-..
T Consensus 115 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 149 (234)
T 3dtn_A 115 SALSIHHLEDEDKKELYKRSYSILKESGIFINADL 149 (234)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 986443332 366644 67789998876553
No 103
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.20 E-value=2.9e-11 Score=113.86 Aligned_cols=119 Identities=14% Similarity=0.084 Sum_probs=93.9
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEec
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVR 102 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~G 102 (223)
.++.+..+++..++......+||++|||.|. .|+.+|.. .+..|+|+++|+++++++.+++|+++. |+. |+++.+
T Consensus 88 ~vQd~ss~l~~~~L~~~~g~~VLDlcaGpGg--kt~~lA~~-~~~~g~V~AvDis~~rl~~~~~n~~r~-g~~nv~v~~~ 163 (456)
T 3m4x_A 88 YSQEPSAMIVGTAAAAKPGEKVLDLCAAPGG--KSTQLAAQ-MKGKGLLVTNEIFPKRAKILSENIERW-GVSNAIVTNH 163 (456)
T ss_dssp EECCTTTHHHHHHHCCCTTCEEEESSCTTCH--HHHHHHHH-HTTCSEEEEECSSHHHHHHHHHHHHHH-TCSSEEEECC
T ss_pred EEECHHHHHHHHHcCCCCCCEEEEECCCcCH--HHHHHHHH-cCCCCEEEEEeCCHHHHHHHHHHHHHc-CCCceEEEeC
Confidence 4555667777777777788899999999997 67777754 344689999999999999999999999 998 999999
Q ss_pred chHHHhcCC-CCccEEEEeCCCc-------------------------ccHHHHHH-hccCCCceEEEEeC
Q 027409 103 QAEEVMGEL-KGVDFLVVDCTSK-------------------------DFARVLRF-ARFSNKGAVLAFKN 146 (223)
Q Consensus 103 dA~evL~~L-~~fDfVFIDa~K~-------------------------~Y~~~f~~-~~~l~~GgvIV~DN 146 (223)
|+.+....+ +.||.||+|+--. .+.++++. .+.|+|||.+|.--
T Consensus 164 Da~~l~~~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsT 234 (456)
T 3m4x_A 164 APAELVPHFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYST 234 (456)
T ss_dssp CHHHHHHHHTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CHHHhhhhccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 999875433 4799999998521 11255653 36779999998644
No 104
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.19 E-value=1.8e-10 Score=98.94 Aligned_cols=115 Identities=12% Similarity=0.006 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHHh-cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchH
Q 027409 27 SGVAELLSAMAAG-WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAE 105 (223)
Q Consensus 27 p~~g~fL~~L~~~-~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~ 105 (223)
|.+...+..|.+. .+.++|||+|||+|. .+++++. . +.+++.+|+++..++.|++|++.. |+.++++.||+.
T Consensus 105 ~tt~~~~~~l~~~~~~~~~VLDiGcG~G~--l~~~la~--~--g~~v~gvDi~~~~v~~a~~n~~~~-~~~v~~~~~d~~ 177 (254)
T 2nxc_A 105 ETTRLALKALARHLRPGDKVLDLGTGSGV--LAIAAEK--L--GGKALGVDIDPMVLPQAEANAKRN-GVRPRFLEGSLE 177 (254)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEEETCTTSH--HHHHHHH--T--TCEEEEEESCGGGHHHHHHHHHHT-TCCCEEEESCHH
T ss_pred HHHHHHHHHHHHhcCCCCEEEEecCCCcH--HHHHHHH--h--CCeEEEEECCHHHHHHHHHHHHHc-CCcEEEEECChh
Confidence 4445566666654 467899999999998 6766654 2 339999999999999999999998 877899999999
Q ss_pred HHhcCCCCccEEEEeCCCcccHHHHHHh-ccCCCceEEEEeCCCC
Q 027409 106 EVMGELKGVDFLVVDCTSKDFARVLRFA-RFSNKGAVLAFKNAFQ 149 (223)
Q Consensus 106 evL~~L~~fDfVFIDa~K~~Y~~~f~~~-~~l~~GgvIV~DNvl~ 149 (223)
+.++. ++||+|+.+.-......+++.+ +.++|||.++.-....
T Consensus 178 ~~~~~-~~fD~Vv~n~~~~~~~~~l~~~~~~LkpgG~lils~~~~ 221 (254)
T 2nxc_A 178 AALPF-GPFDLLVANLYAELHAALAPRYREALVPGGRALLTGILK 221 (254)
T ss_dssp HHGGG-CCEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEEEEG
T ss_pred hcCcC-CCCCEEEECCcHHHHHHHHHHHHHHcCCCCEEEEEeecc
Confidence 87642 4799999988766777788755 5679999998865443
No 105
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.19 E-value=3.3e-11 Score=113.74 Aligned_cols=119 Identities=11% Similarity=0.065 Sum_probs=93.6
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecc
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQ 103 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~Gd 103 (223)
.++....+++..++......+||++|||.|. .|+.+|.. +++.|+|+.+|+++++++.+++|+++. |+.|+++.+|
T Consensus 84 ~vQd~ss~l~a~~L~~~~g~~VLDlgaGpG~--kt~~LA~~-~~~~g~V~AvDis~~~l~~a~~n~~r~-G~~v~~~~~D 159 (464)
T 3m6w_A 84 YIQEPSAQAVGVLLDPKPGERVLDLAAAPGG--KTTHLAAR-MGGKGLLLANEVDGKRVRGLLENVERW-GAPLAVTQAP 159 (464)
T ss_dssp EECCTTTHHHHHHHCCCTTCEEEESSCTTCH--HHHHHHHH-TTTCSEEEEECSCHHHHHHHHHHHHHH-CCCCEEECSC
T ss_pred EEECHHHHHHHHhcCcCCCCEEEEEcCCcCH--HHHHHHHh-CCCCCEEEEEECCHHHHHHHHHHHHHc-CCeEEEEECC
Confidence 3455566777777777788899999999998 77777754 445689999999999999999999999 9889999999
Q ss_pred hHHHhcCC-CCccEEEEeCCCc-------------------------ccHHHHHH-hccCCCceEEEEeC
Q 027409 104 AEEVMGEL-KGVDFLVVDCTSK-------------------------DFARVLRF-ARFSNKGAVLAFKN 146 (223)
Q Consensus 104 A~evL~~L-~~fDfVFIDa~K~-------------------------~Y~~~f~~-~~~l~~GgvIV~DN 146 (223)
+.+....+ +.||.|++|+--. .+.++++. .+.|+|||.+|.--
T Consensus 160 a~~l~~~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysT 229 (464)
T 3m6w_A 160 PRALAEAFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYST 229 (464)
T ss_dssp HHHHHHHHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred HHHhhhhccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 99865433 4799999997531 12556654 36779999998643
No 106
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.19 E-value=1.1e-10 Score=100.64 Aligned_cols=110 Identities=15% Similarity=0.070 Sum_probs=84.9
Q ss_pred HHHHHHhcCCC-eEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhc
Q 027409 33 LSAMAAGWNAK-LIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMG 109 (223)
Q Consensus 33 L~~L~~~~~ak-~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~ 109 (223)
|..++...++. +||+||||+|| .++++|. ..+.++++.+|+|+..++.|++|.++. |+. |+++.||+++.++
T Consensus 6 L~~l~~~v~~g~~VlDIGtGsG~--l~i~la~--~~~~~~V~avDi~~~al~~A~~N~~~~-gl~~~i~~~~~d~l~~l~ 80 (225)
T 3kr9_A 6 LELVASFVSQGAILLDVGSDHAY--LPIELVE--RGQIKSAIAGEVVEGPYQSAVKNVEAH-GLKEKIQVRLANGLAAFE 80 (225)
T ss_dssp HHHHHTTSCTTEEEEEETCSTTH--HHHHHHH--TTSEEEEEEEESSHHHHHHHHHHHHHT-TCTTTEEEEECSGGGGCC
T ss_pred HHHHHHhCCCCCEEEEeCCCcHH--HHHHHHH--hCCCCEEEEEECCHHHHHHHHHHHHHc-CCCceEEEEECchhhhcc
Confidence 56677777554 89999999999 7777765 334679999999999999999999999 997 9999999998876
Q ss_pred CCCCccEEEEeCC-CcccHHHHHHh-ccCCCceEEEEeCC
Q 027409 110 ELKGVDFLVVDCT-SKDFARVLRFA-RFSNKGAVLAFKNA 147 (223)
Q Consensus 110 ~L~~fDfVFIDa~-K~~Y~~~f~~~-~~l~~GgvIV~DNv 147 (223)
.-++||.|+|=.. +..-.++++.. ..++++|.+|.--.
T Consensus 81 ~~~~~D~IviaG~Gg~~i~~Il~~~~~~L~~~~~lVlq~~ 120 (225)
T 3kr9_A 81 ETDQVSVITIAGMGGRLIARILEEGLGKLANVERLILQPN 120 (225)
T ss_dssp GGGCCCEEEEEEECHHHHHHHHHHTGGGCTTCCEEEEEES
T ss_pred cCcCCCEEEEcCCChHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 4236999998443 33346777755 45677777666434
No 107
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.19 E-value=8.6e-11 Score=97.47 Aligned_cols=106 Identities=19% Similarity=0.167 Sum_probs=80.0
Q ss_pred HHHHHHHHhc-CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhc
Q 027409 31 ELLSAMAAGW-NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMG 109 (223)
Q Consensus 31 ~fL~~L~~~~-~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~ 109 (223)
.++..+.... ..++|||||||+|. .++.++. . .+++.+|+++++++.|++++... +..++++.+|+.+.-.
T Consensus 22 ~~~~~~~~~~~~~~~vLdiG~G~G~--~~~~l~~---~--~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~~d~~~~~~ 93 (243)
T 3d2l_A 22 EWVAWVLEQVEPGKRIADIGCGTGT--ATLLLAD---H--YEVTGVDLSEEMLEIAQEKAMET-NRHVDFWVQDMRELEL 93 (243)
T ss_dssp HHHHHHHHHSCTTCEEEEESCTTCH--HHHHHTT---T--SEEEEEESCHHHHHHHHHHHHHT-TCCCEEEECCGGGCCC
T ss_pred HHHHHHHHHcCCCCeEEEecCCCCH--HHHHHhh---C--CeEEEEECCHHHHHHHHHhhhhc-CCceEEEEcChhhcCC
Confidence 3444455444 34799999999997 6656542 1 79999999999999999999988 7669999999987422
Q ss_pred CCCCccEEEEeCCC-------cccHHHHHHh-ccCCCceEEEEe
Q 027409 110 ELKGVDFLVVDCTS-------KDFARVLRFA-RFSNKGAVLAFK 145 (223)
Q Consensus 110 ~L~~fDfVFIDa~K-------~~Y~~~f~~~-~~l~~GgvIV~D 145 (223)
. +.||+|++..+- ++...+++.+ +.++|||.++++
T Consensus 94 ~-~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 94 P-EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp S-SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred C-CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 2 589999997632 3445666644 567999999985
No 108
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.18 E-value=3.9e-11 Score=100.72 Aligned_cols=99 Identities=17% Similarity=0.074 Sum_probs=77.2
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhc--CC-CCccEE
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMG--EL-KGVDFL 117 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~--~L-~~fDfV 117 (223)
+..+|||||||+|+ .+++||... + .++|+.+|+++++++.|+++.+.. -.++++.||+.+... .+ ..||+|
T Consensus 74 ~~~~VLDlGcG~G~--~~~~la~~~-~-~~~v~gvD~s~~~~~~a~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~D~v 147 (230)
T 1fbn_A 74 RDSKILYLGASAGT--TPSHVADIA-D-KGIVYAIEYAPRIMRELLDACAER--ENIIPILGDANKPQEYANIVEKVDVI 147 (230)
T ss_dssp TTCEEEEESCCSSH--HHHHHHHHT-T-TSEEEEEESCHHHHHHHHHHTTTC--TTEEEEECCTTCGGGGTTTSCCEEEE
T ss_pred CCCEEEEEcccCCH--HHHHHHHHc-C-CcEEEEEECCHHHHHHHHHHhhcC--CCeEEEECCCCCcccccccCccEEEE
Confidence 56789999999998 777777543 2 589999999999999999986543 228999999976211 11 579999
Q ss_pred EEe-CCCcccHHHHHHh-ccCCCceEEEEe
Q 027409 118 VVD-CTSKDFARVLRFA-RFSNKGAVLAFK 145 (223)
Q Consensus 118 FID-a~K~~Y~~~f~~~-~~l~~GgvIV~D 145 (223)
|.| ..++++..+++.+ +.|+|||.++.-
T Consensus 148 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 148 YEDVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp EECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 998 4566778888765 578999988884
No 109
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.18 E-value=6.3e-11 Score=103.21 Aligned_cols=99 Identities=13% Similarity=0.148 Sum_probs=80.8
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCCCCccEE
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGELKGVDFL 117 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L~~fDfV 117 (223)
...++||++|||+|+ .++++|.... . +|+.+|.++++++.|++|++.. |+. ++++.||+.+.+. -..||+|
T Consensus 124 ~~~~~VLDlgcG~G~--~~~~la~~~~--~-~V~~vD~s~~~~~~a~~n~~~n-~~~~~v~~~~~D~~~~~~-~~~fD~V 196 (278)
T 2frn_A 124 KPDELVVDMFAGIGH--LSLPIAVYGK--A-KVIAIEKDPYTFKFLVENIHLN-KVEDRMSAYNMDNRDFPG-ENIADRI 196 (278)
T ss_dssp CTTCEEEETTCTTTT--THHHHHHHTC--C-EEEEECCCHHHHHHHHHHHHHT-TCTTTEEEECSCTTTCCC-CSCEEEE
T ss_pred CCCCEEEEecccCCH--HHHHHHHhCC--C-EEEEEECCHHHHHHHHHHHHHc-CCCceEEEEECCHHHhcc-cCCccEE
Confidence 347899999999998 7878875421 2 7999999999999999999998 887 9999999998776 3479999
Q ss_pred EEeCCCcccHHHHH-HhccCCCceEEEEeC
Q 027409 118 VVDCTSKDFARVLR-FARFSNKGAVLAFKN 146 (223)
Q Consensus 118 FIDa~K~~Y~~~f~-~~~~l~~GgvIV~DN 146 (223)
++|.- ....++++ ..+.++|||++++-.
T Consensus 197 i~~~p-~~~~~~l~~~~~~LkpgG~l~~~~ 225 (278)
T 2frn_A 197 LMGYV-VRTHEFIPKALSIAKDGAIIHYHN 225 (278)
T ss_dssp EECCC-SSGGGGHHHHHHHEEEEEEEEEEE
T ss_pred EECCc-hhHHHHHHHHHHHCCCCeEEEEEE
Confidence 99975 34466776 456779999888743
No 110
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.18 E-value=1.2e-10 Score=106.09 Aligned_cols=107 Identities=11% Similarity=0.157 Sum_probs=86.4
Q ss_pred HHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCc-e--EEEEecchHHHhcC
Q 027409 34 SAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGW-V--SEVIVRQAEEVMGE 110 (223)
Q Consensus 34 ~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~-~--I~li~GdA~evL~~ 110 (223)
.++....+.++|||+|||+|. .++.+|.. . .++|+.+|++++.++.|++|++.. |+ . ++++.||+.+.++.
T Consensus 213 ~~l~~~~~~~~VLDl~cG~G~--~sl~la~~--g-~~~V~~vD~s~~al~~a~~n~~~n-gl~~~~v~~~~~D~~~~~~~ 286 (396)
T 3c0k_A 213 LATRRYVENKRVLNCFSYTGG--FAVSALMG--G-CSQVVSVDTSQEALDIARQNVELN-KLDLSKAEFVRDDVFKLLRT 286 (396)
T ss_dssp HHHHHHCTTCEEEEESCTTCS--HHHHHHHT--T-CSEEEEEESCHHHHHHHHHHHHHT-TCCGGGEEEEESCHHHHHHH
T ss_pred HHHHHhhCCCeEEEeeccCCH--HHHHHHHC--C-CCEEEEEECCHHHHHHHHHHHHHc-CCCccceEEEECCHHHHHHH
Confidence 344455788999999999998 77777643 1 358999999999999999999998 98 4 99999999998875
Q ss_pred C----CCccEEEEeCCC------------cccHHHHH-HhccCCCceEEEEeC
Q 027409 111 L----KGVDFLVVDCTS------------KDFARVLR-FARFSNKGAVLAFKN 146 (223)
Q Consensus 111 L----~~fDfVFIDa~K------------~~Y~~~f~-~~~~l~~GgvIV~DN 146 (223)
+ ..||+|++|.-. ..|.+++. .++.++|||++++-+
T Consensus 287 ~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 339 (396)
T 3c0k_A 287 YRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFS 339 (396)
T ss_dssp HHHTTCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred HHhcCCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 4 379999999643 56777776 456778999887644
No 111
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.17 E-value=9.2e-11 Score=101.36 Aligned_cols=106 Identities=13% Similarity=-0.038 Sum_probs=82.4
Q ss_pred HHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCCCCcc
Q 027409 36 MAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGELKGVD 115 (223)
Q Consensus 36 L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L~~fD 115 (223)
+....++++|||||||+|. .++.++.. .+.+++++.+|++++..+.|++++... +..++++.+|+.+. +.-+.||
T Consensus 17 ~~~~~~~~~vLDiGcG~G~--~~~~l~~~-~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~~v~~~~~d~~~~-~~~~~fD 91 (284)
T 3gu3_A 17 VWKITKPVHIVDYGCGYGY--LGLVLMPL-LPEGSKYTGIDSGETLLAEARELFRLL-PYDSEFLEGDATEI-ELNDKYD 91 (284)
T ss_dssp TSCCCSCCEEEEETCTTTH--HHHHHTTT-SCTTCEEEEEESCHHHHHHHHHHHHSS-SSEEEEEESCTTTC-CCSSCEE
T ss_pred HhccCCCCeEEEecCCCCH--HHHHHHHh-CCCCCEEEEEECCHHHHHHHHHHHHhc-CCceEEEEcchhhc-CcCCCee
Confidence 3355688999999999998 77677543 233579999999999999999999988 87899999999873 3225799
Q ss_pred EEEEeCCCc---ccHHHHHHh-ccCCCceEEEEeC
Q 027409 116 FLVVDCTSK---DFARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 116 fVFIDa~K~---~Y~~~f~~~-~~l~~GgvIV~DN 146 (223)
+|+...--. +...++..+ +.|+|||.+++-.
T Consensus 92 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 126 (284)
T 3gu3_A 92 IAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFE 126 (284)
T ss_dssp EEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEe
Confidence 999987533 335677644 6779999888543
No 112
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.17 E-value=6.3e-11 Score=107.69 Aligned_cols=104 Identities=16% Similarity=0.200 Sum_probs=85.0
Q ss_pred HHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEecchHHHhcCC--
Q 027409 35 AMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVRQAEEVMGEL-- 111 (223)
Q Consensus 35 ~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~GdA~evL~~L-- 111 (223)
.++.. +.++|||+|||+|. .++++|.. .++|+.+|++++.++.|++|++.. |+. ++++.||+.+.++.+
T Consensus 204 ~~~~~-~~~~VLDlg~G~G~--~~~~la~~----~~~v~~vD~s~~~~~~a~~n~~~n-~~~~~~~~~~d~~~~~~~~~~ 275 (382)
T 1wxx_A 204 YMERF-RGERALDVFSYAGG--FALHLALG----FREVVAVDSSAEALRRAEENARLN-GLGNVRVLEANAFDLLRRLEK 275 (382)
T ss_dssp HGGGC-CEEEEEEETCTTTH--HHHHHHHH----EEEEEEEESCHHHHHHHHHHHHHT-TCTTEEEEESCHHHHHHHHHH
T ss_pred HHHhc-CCCeEEEeeeccCH--HHHHHHHh----CCEEEEEECCHHHHHHHHHHHHHc-CCCCceEEECCHHHHHHHHHh
Confidence 34444 67899999999998 77777654 468999999999999999999998 988 999999999988754
Q ss_pred --CCccEEEEeCCC------------cccHHHHHHh-ccCCCceEEEEeC
Q 027409 112 --KGVDFLVVDCTS------------KDFARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 112 --~~fDfVFIDa~K------------~~Y~~~f~~~-~~l~~GgvIV~DN 146 (223)
..||+|++|.-. ..|.+++..+ +.++|||++++-.
T Consensus 276 ~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 325 (382)
T 1wxx_A 276 EGERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATAS 325 (382)
T ss_dssp TTCCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCCeeEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 379999999754 5577777644 6779999877643
No 113
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.17 E-value=3.3e-10 Score=98.88 Aligned_cols=115 Identities=7% Similarity=0.026 Sum_probs=89.6
Q ss_pred CcHHHHHHHHHHHHhc---CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEE
Q 027409 25 KESGVAELLSAMAAGW---NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEV 99 (223)
Q Consensus 25 i~p~~g~fL~~L~~~~---~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~l 99 (223)
+.+.+.+.+..++... ...+|||||||.|. .++.++... +.+++.+|+++++++.|++++++. |+. +++
T Consensus 71 l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~--~~~~la~~~---~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~v~~ 144 (318)
T 2fk8_A 71 LEEAQYAKVDLNLDKLDLKPGMTLLDIGCGWGT--TMRRAVERF---DVNVIGLTLSKNQHARCEQVLASI-DTNRSRQV 144 (318)
T ss_dssp HHHHHHHHHHHHHTTSCCCTTCEEEEESCTTSH--HHHHHHHHH---CCEEEEEESCHHHHHHHHHHHHTS-CCSSCEEE
T ss_pred HHHHHHHHHHHHHHhcCCCCcCEEEEEcccchH--HHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhc-CCCCceEE
Confidence 3444556666666654 45699999999997 676776543 569999999999999999999998 886 999
Q ss_pred EecchHHHhcCCCCccEEEEeC-----CCcccHHHHHHh-ccCCCceEEEEeCCC
Q 027409 100 IVRQAEEVMGELKGVDFLVVDC-----TSKDFARVLRFA-RFSNKGAVLAFKNAF 148 (223)
Q Consensus 100 i~GdA~evL~~L~~fDfVFIDa-----~K~~Y~~~f~~~-~~l~~GgvIV~DNvl 148 (223)
+.+|+.+. + +.||+|+... ..+++..+++.+ +.|+|||.++.....
T Consensus 145 ~~~d~~~~-~--~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 196 (318)
T 2fk8_A 145 LLQGWEDF-A--EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSV 196 (318)
T ss_dssp EESCGGGC-C--CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred EECChHHC-C--CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 99998663 4 6899999873 335667888755 678999999886654
No 114
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.16 E-value=1.3e-10 Score=104.13 Aligned_cols=117 Identities=15% Similarity=0.092 Sum_probs=92.1
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEec
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVR 102 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~G 102 (223)
.+.+..++.+..++...+..+|||+|||+|. .++.+|.... ++++|+.+|+|+++++.|++|++.+ |+. |+++.+
T Consensus 186 ~l~~~la~~l~~~~~~~~~~~vLD~gcGsG~--~~ie~a~~~~-~~~~v~g~Di~~~~i~~a~~n~~~~-g~~~i~~~~~ 261 (354)
T 3tma_A 186 SLTPVLAQALLRLADARPGMRVLDPFTGSGT--IALEAASTLG-PTSPVYAGDLDEKRLGLAREAALAS-GLSWIRFLRA 261 (354)
T ss_dssp SCCHHHHHHHHHHTTCCTTCCEEESSCTTSH--HHHHHHHHHC-TTSCEEEEESCHHHHHHHHHHHHHT-TCTTCEEEEC
T ss_pred CcCHHHHHHHHHHhCCCCCCEEEeCCCCcCH--HHHHHHHhhC-CCceEEEEECCHHHHHHHHHHHHHc-CCCceEEEeC
Confidence 5666677777777777778899999999997 6666665431 4689999999999999999999999 997 999999
Q ss_pred chHHHhcCCCCccEEEEeCC-------C----cccHHHHHHh-ccCCCceEEEE
Q 027409 103 QAEEVMGELKGVDFLVVDCT-------S----KDFARVLRFA-RFSNKGAVLAF 144 (223)
Q Consensus 103 dA~evL~~L~~fDfVFIDa~-------K----~~Y~~~f~~~-~~l~~GgvIV~ 144 (223)
|+.+.....+.||+|+.|.- + ..|..+++.+ +.++|||.++.
T Consensus 262 D~~~~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i 315 (354)
T 3tma_A 262 DARHLPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVAL 315 (354)
T ss_dssp CGGGGGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEE
T ss_pred ChhhCccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 99997665567999999742 1 2356777654 56788887665
No 115
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.16 E-value=3.3e-10 Score=105.35 Aligned_cols=113 Identities=17% Similarity=0.076 Sum_probs=89.9
Q ss_pred CCcHHHHHHH-HHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEec
Q 027409 24 IKESGVAELL-SAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVR 102 (223)
Q Consensus 24 ii~p~~g~fL-~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~G 102 (223)
+..+.+.+.| ..+....+..+|||+|||+|. .+++||.. +.+|+.+|.++++++.|++|.+.. |+.++++.|
T Consensus 272 q~n~~~~e~l~~~~~~~~~~~~VLDlgcG~G~--~sl~la~~----~~~V~gvD~s~~ai~~A~~n~~~n-gl~v~~~~~ 344 (425)
T 2jjq_A 272 QTNSYQAVNLVRKVSELVEGEKILDMYSGVGT--FGIYLAKR----GFNVKGFDSNEFAIEMARRNVEIN-NVDAEFEVA 344 (425)
T ss_dssp CSBHHHHHHHHHHHHHHCCSSEEEEETCTTTH--HHHHHHHT----TCEEEEEESCHHHHHHHHHHHHHH-TCCEEEEEC
T ss_pred ccCHHHHHHHHHHhhccCCCCEEEEeeccchH--HHHHHHHc----CCEEEEEECCHHHHHHHHHHHHHc-CCcEEEEEC
Confidence 4455555544 444446677899999999998 77777643 468999999999999999999998 877999999
Q ss_pred chHHHhcCCCCccEEEEeCCCcccH-HHHHHhccCCCceEEEEe
Q 027409 103 QAEEVMGELKGVDFLVVDCTSKDFA-RVLRFARFSNKGAVLAFK 145 (223)
Q Consensus 103 dA~evL~~L~~fDfVFIDa~K~~Y~-~~f~~~~~l~~GgvIV~D 145 (223)
|+.+.++. .||+|++|.-...+. .+++.+..++|||++++.
T Consensus 345 d~~~~~~~--~fD~Vv~dPPr~g~~~~~~~~l~~l~p~givyvs 386 (425)
T 2jjq_A 345 SDREVSVK--GFDTVIVDPPRAGLHPRLVKRLNREKPGVIVYVS 386 (425)
T ss_dssp CTTTCCCT--TCSEEEECCCTTCSCHHHHHHHHHHCCSEEEEEE
T ss_pred ChHHcCcc--CCCEEEEcCCccchHHHHHHHHHhcCCCcEEEEE
Confidence 99997765 799999998755554 477777777888888764
No 116
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.16 E-value=5e-10 Score=95.98 Aligned_cols=115 Identities=10% Similarity=0.054 Sum_probs=89.3
Q ss_pred CcHHHHHHHHHHHHhc---CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEE
Q 027409 25 KESGVAELLSAMAAGW---NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEV 99 (223)
Q Consensus 25 i~p~~g~fL~~L~~~~---~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~l 99 (223)
+.+.+-+.+..++... ...+|||||||.|. .++.++... +.+++.+|++++.++.|++.+++. |+. +++
T Consensus 45 l~~a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~--~~~~l~~~~---~~~v~gvd~s~~~~~~a~~~~~~~-~~~~~~~~ 118 (287)
T 1kpg_A 45 LQEAQIAKIDLALGKLGLQPGMTLLDVGCGWGA--TMMRAVEKY---DVNVVGLTLSKNQANHVQQLVANS-ENLRSKRV 118 (287)
T ss_dssp HHHHHHHHHHHHHTTTTCCTTCEEEEETCTTSH--HHHHHHHHH---CCEEEEEESCHHHHHHHHHHHHTC-CCCSCEEE
T ss_pred HHHHHHHHHHHHHHHcCCCCcCEEEEECCcccH--HHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHhc-CCCCCeEE
Confidence 4455556666666654 45699999999997 676776432 459999999999999999999998 875 999
Q ss_pred EecchHHHhcCCCCccEEEEeCC-----CcccHHHHHHh-ccCCCceEEEEeCCC
Q 027409 100 IVRQAEEVMGELKGVDFLVVDCT-----SKDFARVLRFA-RFSNKGAVLAFKNAF 148 (223)
Q Consensus 100 i~GdA~evL~~L~~fDfVFIDa~-----K~~Y~~~f~~~-~~l~~GgvIV~DNvl 148 (223)
+.+|+.+ ++ +.||+|+.-.. ..++..+|+.+ +.|+|||.++.....
T Consensus 119 ~~~d~~~-~~--~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 170 (287)
T 1kpg_A 119 LLAGWEQ-FD--EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTIT 170 (287)
T ss_dssp EESCGGG-CC--CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred EECChhh-CC--CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 9999965 44 68999998742 25667888755 678999999886643
No 117
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.16 E-value=1.6e-10 Score=94.77 Aligned_cols=113 Identities=16% Similarity=0.054 Sum_probs=85.3
Q ss_pred HHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEecchHHHh
Q 027409 30 AELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVRQAEEVM 108 (223)
Q Consensus 30 g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~GdA~evL 108 (223)
..++.. +......+|||||||.|. .+.+++... .++++++.+|.++++++.|+++++.. |+. ++++.+|+.+.-
T Consensus 27 ~~~~~~-~~~~~~~~vLDiG~G~G~--~~~~l~~~~-~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~~~d~~~~~ 101 (219)
T 3dh0_A 27 EKVLKE-FGLKEGMTVLDVGTGAGF--YLPYLSKMV-GEKGKVYAIDVQEEMVNYAWEKVNKL-GLKNVEVLKSEENKIP 101 (219)
T ss_dssp HHHHHH-HTCCTTCEEEESSCTTCT--THHHHHHHH-TTTCEEEEEESCHHHHHHHHHHHHHH-TCTTEEEEECBTTBCS
T ss_pred HHHHHH-hCCCCCCEEEEEecCCCH--HHHHHHHHh-CCCcEEEEEECCHHHHHHHHHHHHHc-CCCcEEEEecccccCC
Confidence 334443 355677899999999998 676776543 34679999999999999999999999 987 999999997632
Q ss_pred cCCCCccEEEEeCCCcc---cHHHHHHh-ccCCCceEEEEeCC
Q 027409 109 GELKGVDFLVVDCTSKD---FARVLRFA-RFSNKGAVLAFKNA 147 (223)
Q Consensus 109 ~~L~~fDfVFIDa~K~~---Y~~~f~~~-~~l~~GgvIV~DNv 147 (223)
..-+.||+|+....-.. ...+++.+ +.++|||.++.-..
T Consensus 102 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 144 (219)
T 3dh0_A 102 LPDNTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDW 144 (219)
T ss_dssp SCSSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEe
Confidence 11247999999865443 36677644 67799998887553
No 118
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.15 E-value=5.3e-11 Score=97.67 Aligned_cols=108 Identities=15% Similarity=0.060 Sum_probs=82.0
Q ss_pred HHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhc
Q 027409 30 AELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMG 109 (223)
Q Consensus 30 g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~ 109 (223)
.+++..++...+..+|||||||+|. .+..|+.. +.+++.+|+++++++.|++++... + .++++.+|+.+..
T Consensus 40 ~~~l~~~~~~~~~~~vLDiGcG~G~--~~~~l~~~----~~~v~~vD~s~~~~~~a~~~~~~~-~-~~~~~~~d~~~~~- 110 (216)
T 3ofk_A 40 TQLLRLSLSSGAVSNGLEIGCAAGA--FTEKLAPH----CKRLTVIDVMPRAIGRACQRTKRW-S-HISWAATDILQFS- 110 (216)
T ss_dssp HHHHHHHTTTSSEEEEEEECCTTSH--HHHHHGGG----EEEEEEEESCHHHHHHHHHHTTTC-S-SEEEEECCTTTCC-
T ss_pred HHHHHHHcccCCCCcEEEEcCCCCH--HHHHHHHc----CCEEEEEECCHHHHHHHHHhcccC-C-CeEEEEcchhhCC-
Confidence 3455555555667899999999998 66676532 468999999999999999998876 5 5999999998754
Q ss_pred CCCCccEEEEeCC------CcccHHHHHHh-ccCCCceEEEEeC
Q 027409 110 ELKGVDFLVVDCT------SKDFARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 110 ~L~~fDfVFIDa~------K~~Y~~~f~~~-~~l~~GgvIV~DN 146 (223)
.-+.||+|+.... .+....++..+ +.|+|||+++...
T Consensus 111 ~~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 111 TAELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp CSCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 2258999999742 23345667644 6779999999843
No 119
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.15 E-value=1.8e-10 Score=113.30 Aligned_cols=113 Identities=11% Similarity=0.120 Sum_probs=90.1
Q ss_pred HHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce---EEEEecchHH
Q 027409 30 AELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV---SEVIVRQAEE 106 (223)
Q Consensus 30 g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~---I~li~GdA~e 106 (223)
...-.++....+.++||++|||+|. .++++|.. ...+|+++|.++++++.|++|++.. |+. ++++.||+.+
T Consensus 528 r~~r~~l~~~~~g~~VLDlg~GtG~--~sl~aa~~---ga~~V~aVD~s~~al~~a~~N~~~n-gl~~~~v~~i~~D~~~ 601 (703)
T 3v97_A 528 RIARRMLGQMSKGKDFLNLFSYTGS--ATVHAGLG---GARSTTTVDMSRTYLEWAERNLRLN-GLTGRAHRLIQADCLA 601 (703)
T ss_dssp HHHHHHHHHHCTTCEEEEESCTTCH--HHHHHHHT---TCSEEEEEESCHHHHHHHHHHHHHT-TCCSTTEEEEESCHHH
T ss_pred HHHHHHHHHhcCCCcEEEeeechhH--HHHHHHHC---CCCEEEEEeCCHHHHHHHHHHHHHc-CCCccceEEEecCHHH
Confidence 3334455566688999999999998 77776642 2257999999999999999999998 876 9999999999
Q ss_pred HhcCC-CCccEEEEeCCC--------------cccHHHHHHh-ccCCCceEEEEeCCC
Q 027409 107 VMGEL-KGVDFLVVDCTS--------------KDFARVLRFA-RFSNKGAVLAFKNAF 148 (223)
Q Consensus 107 vL~~L-~~fDfVFIDa~K--------------~~Y~~~f~~~-~~l~~GgvIV~DNvl 148 (223)
.++.. +.||+|++|.-. ..|.+++..+ +.++|||++++.+-.
T Consensus 602 ~l~~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 602 WLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp HHHHCCCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred HHHhcCCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 98865 489999999742 3567777644 677999999887754
No 120
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.15 E-value=1.5e-10 Score=105.47 Aligned_cols=106 Identities=21% Similarity=0.177 Sum_probs=84.2
Q ss_pred HHHHhc-CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCC
Q 027409 35 AMAAGW-NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGEL 111 (223)
Q Consensus 35 ~L~~~~-~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L 111 (223)
++.... +.++|||+|||+|. .++.+|.. ..++|+.+|++++.++.|++|++.. |+. ++++.+|+.+.++.+
T Consensus 210 ~~~~~~~~~~~VLDl~~G~G~--~~~~la~~---g~~~v~~vD~s~~~l~~a~~n~~~n-~~~~~v~~~~~d~~~~~~~~ 283 (396)
T 2as0_A 210 ALEKWVQPGDRVLDVFTYTGG--FAIHAAIA---GADEVIGIDKSPRAIETAKENAKLN-GVEDRMKFIVGSAFEEMEKL 283 (396)
T ss_dssp HHGGGCCTTCEEEETTCTTTH--HHHHHHHT---TCSEEEEEESCHHHHHHHHHHHHHT-TCGGGEEEEESCHHHHHHHH
T ss_pred HHHHHhhCCCeEEEecCCCCH--HHHHHHHC---CCCEEEEEeCCHHHHHHHHHHHHHc-CCCccceEEECCHHHHHHHH
Confidence 344445 77899999999997 77777643 2358999999999999999999998 985 999999999987653
Q ss_pred ----CCccEEEEeCCC------------cccHHHHHH-hccCCCceEEE-EeC
Q 027409 112 ----KGVDFLVVDCTS------------KDFARVLRF-ARFSNKGAVLA-FKN 146 (223)
Q Consensus 112 ----~~fDfVFIDa~K------------~~Y~~~f~~-~~~l~~GgvIV-~DN 146 (223)
..||+|++|.-. ..|.+++.. ++.++|||+++ +.+
T Consensus 284 ~~~~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 336 (396)
T 2as0_A 284 QKKGEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSC 336 (396)
T ss_dssp HHTTCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEEC
T ss_pred HhhCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 479999999754 557777764 46779999554 444
No 121
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.15 E-value=1.6e-10 Score=109.05 Aligned_cols=119 Identities=7% Similarity=0.017 Sum_probs=91.0
Q ss_pred CcHHHHHHHHHHHHhc--CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEe
Q 027409 25 KESGVAELLSAMAAGW--NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIV 101 (223)
Q Consensus 25 i~p~~g~fL~~L~~~~--~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~ 101 (223)
++.....++..++... ...+||++|||.|+ .|+.||.. .+++|+|+++|+++++++.+++|+++. |+. |+++.
T Consensus 99 ~Qd~~s~l~~~~L~~~~~~g~~VLDl~aGpG~--kt~~lA~~-~~~~g~V~avDis~~~l~~~~~n~~r~-g~~nv~~~~ 174 (479)
T 2frx_A 99 IQEASSMLPVAALFADGNAPQRVMDVAAAPGS--KTTQISAR-MNNEGAILANEFSASRVKVLHANISRC-GISNVALTH 174 (479)
T ss_dssp ECCHHHHHHHHHHTTTTCCCSEEEESSCTTSH--HHHHHHHH-TTTCSEEEEECSSHHHHHHHHHHHHHH-TCCSEEEEC
T ss_pred EECHHHHHHHHHhCcccCCCCEEEEeCCCCCH--HHHHHHHh-CCCCCEEEEEECCHHHHHHHHHHHHHc-CCCcEEEEe
Confidence 3444555655566555 67799999999998 77788754 445689999999999999999999999 998 99999
Q ss_pred cchHHHhcCC-CCccEEEEeCCCcc-------------------------cHHHHHH-hccCCCceEEEEeCC
Q 027409 102 RQAEEVMGEL-KGVDFLVVDCTSKD-------------------------FARVLRF-ARFSNKGAVLAFKNA 147 (223)
Q Consensus 102 GdA~evL~~L-~~fDfVFIDa~K~~-------------------------Y~~~f~~-~~~l~~GgvIV~DNv 147 (223)
+|+.+....+ +.||.|++|+--.. +.++++. .+.++|||.+|...-
T Consensus 175 ~D~~~~~~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTc 247 (479)
T 2frx_A 175 FDGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTC 247 (479)
T ss_dssp CCSTTHHHHSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred CCHHHhhhhccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecc
Confidence 9998754423 47999999964211 2345553 367799999998763
No 122
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.14 E-value=2.1e-10 Score=96.34 Aligned_cols=111 Identities=10% Similarity=0.070 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEecchH
Q 027409 27 SGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVRQAE 105 (223)
Q Consensus 27 p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~GdA~ 105 (223)
+.....+..++......+|||||||+|+ .+..++.. .++++.+|+++++++.|++++++. |+. ++++.+|+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~--~~~~l~~~----~~~v~~vD~s~~~~~~a~~~~~~~-~~~~v~~~~~d~~ 79 (239)
T 1xxl_A 7 HHSLGLMIKTAECRAEHRVLDIGAGAGH--TALAFSPY----VQECIGVDATKEMVEVASSFAQEK-GVENVRFQQGTAE 79 (239)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEESCTTSH--HHHHHGGG----SSEEEEEESCHHHHHHHHHHHHHH-TCCSEEEEECBTT
T ss_pred CCCcchHHHHhCcCCCCEEEEEccCcCH--HHHHHHHh----CCEEEEEECCHHHHHHHHHHHHHc-CCCCeEEEecccc
Confidence 4455556666777888999999999998 66666532 469999999999999999999998 988 999999986
Q ss_pred HHhcCC-CCccEEEEeCCCc---ccHHHHHHh-ccCCCceEEEEe
Q 027409 106 EVMGEL-KGVDFLVVDCTSK---DFARVLRFA-RFSNKGAVLAFK 145 (223)
Q Consensus 106 evL~~L-~~fDfVFIDa~K~---~Y~~~f~~~-~~l~~GgvIV~D 145 (223)
+ ++-- +.||+|+....-. +...++..+ +.++|||.+++-
T Consensus 80 ~-~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 123 (239)
T 1xxl_A 80 S-LPFPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLV 123 (239)
T ss_dssp B-CCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred c-CCCCCCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEE
Confidence 5 4422 4799999985433 345666644 677999988773
No 123
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.14 E-value=1.6e-10 Score=98.30 Aligned_cols=103 Identities=14% Similarity=-0.007 Sum_probs=81.2
Q ss_pred hcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEecchHHHhcCCCCccEE
Q 027409 39 GWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVRQAEEVMGELKGVDFL 117 (223)
Q Consensus 39 ~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~GdA~evL~~L~~fDfV 117 (223)
.....+|||||||+|+ .+..++.. .++++++.+|+++++++.|++++... |+. ++++.+|+.+.-..-+.||+|
T Consensus 35 ~~~~~~vLDiG~G~G~--~~~~l~~~--~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~~~d~~~~~~~~~~fD~v 109 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGA--QTVILAKN--NPDAEITSIDISPESLEKARENTEKN-GIKNVKFLQANIFSLPFEDSSFDHI 109 (276)
T ss_dssp CCTTCEEEETTCTTSH--HHHHHHHH--CTTSEEEEEESCHHHHHHHHHHHHHT-TCCSEEEEECCGGGCCSCTTCEEEE
T ss_pred CCCCCeEEEecCCCCH--HHHHHHHh--CCCCEEEEEECCHHHHHHHHHHHHHc-CCCCcEEEEcccccCCCCCCCeeEE
Confidence 3567899999999998 66677654 34689999999999999999999998 987 999999998743223589999
Q ss_pred EEeCCC---cccHHHHHHh-ccCCCceEEEEeC
Q 027409 118 VVDCTS---KDFARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 118 FIDa~K---~~Y~~~f~~~-~~l~~GgvIV~DN 146 (223)
+....- .+...++..+ +.|+|||++++-.
T Consensus 110 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 110 FVCFVLEHLQSPEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp EEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEechhhhcCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 997533 2335677655 6679999888743
No 124
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.13 E-value=1.8e-10 Score=98.38 Aligned_cols=101 Identities=6% Similarity=-0.096 Sum_probs=77.1
Q ss_pred hcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHh------hcCce-EEEEecchHHHhcC-
Q 027409 39 GWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYD------VVGWV-SEVIVRQAEEVMGE- 110 (223)
Q Consensus 39 ~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~------a~G~~-I~li~GdA~evL~~- 110 (223)
..+..+|||||||+|. .+++||.. .++..++.||+++++++.|+++++. . ++. |+++.|||.+.|+.
T Consensus 44 ~~~~~~vLDiGcG~G~--~~~~la~~--~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~-~~~nv~~~~~d~~~~l~~~ 118 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGG--LLVELSPL--FPDTLILGLEIRVKVSDYVQDRIRALRAAPAG-GFQNIACLRSNAMKHLPNF 118 (235)
T ss_dssp --CCEEEEEETCTTCH--HHHHHGGG--STTSEEEEEESCHHHHHHHHHHHHHHHHSTTC-CCTTEEEEECCTTTCHHHH
T ss_pred cCCCCeEEEEccCCcH--HHHHHHHH--CCCCeEEEEECCHHHHHHHHHHHHHHHHHHhc-CCCeEEEEECcHHHhhhhh
Confidence 3567789999999998 77777643 3568999999999999999998874 4 566 99999999886653
Q ss_pred C--CCccEEEEeCCCc-----------ccHHHHHHh-ccCCCceEEEE
Q 027409 111 L--KGVDFLVVDCTSK-----------DFARVLRFA-RFSNKGAVLAF 144 (223)
Q Consensus 111 L--~~fDfVFIDa~K~-----------~Y~~~f~~~-~~l~~GgvIV~ 144 (223)
+ +.||.||+...-. .+..+++.+ +.|+|||.+++
T Consensus 119 ~~~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~ 166 (235)
T 3ckk_A 119 FYKGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYT 166 (235)
T ss_dssp CCTTCEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEE
T ss_pred CCCcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEE
Confidence 3 4799999864211 235788755 67899998874
No 125
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.12 E-value=3e-10 Score=106.06 Aligned_cols=95 Identities=9% Similarity=0.075 Sum_probs=71.6
Q ss_pred CCCeEEEEccC------cchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEecchHH--HhcC-
Q 027409 41 NAKLIVEAWTH------GGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVRQAEE--VMGE- 110 (223)
Q Consensus 41 ~ak~ILEIGT~------~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~GdA~e--vL~~- 110 (223)
++.+||||||| +|. +++.++.... ++++|+.||+++++. . ... |+++.||+.+ .+..
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG--~Sl~la~~~f-P~a~V~GVDiSp~m~---------~-~~~rI~fv~GDa~dlpf~~~l 282 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGG--GSLRMWKSFF-PRGQIYGLDIMDKSH---------V-DELRIRTIQGDQNDAEFLDRI 282 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCC--HHHHHHHHHC-TTCEEEEEESSCCGG---------G-CBTTEEEEECCTTCHHHHHHH
T ss_pred CCCEEEEEecCCCcCCCCCH--HHHHHHHHhC-CCCEEEEEECCHHHh---------h-cCCCcEEEEecccccchhhhh
Confidence 78999999999 665 5666665433 478999999999972 2 223 9999999965 3321
Q ss_pred ---CCCccEEEEeCCC--cccHHHHHHh-ccCCCceEEEEeCCC
Q 027409 111 ---LKGVDFLVVDCTS--KDFARVLRFA-RFSNKGAVLAFKNAF 148 (223)
Q Consensus 111 ---L~~fDfVFIDa~K--~~Y~~~f~~~-~~l~~GgvIV~DNvl 148 (223)
-++||+||.|+.. .++..+|+.+ +.|+|||+++++++.
T Consensus 283 ~~~d~sFDlVisdgsH~~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 283 ARRYGPFDIVIDDGSHINAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp HHHHCCEEEEEECSCCCHHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred hcccCCccEEEECCcccchhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 1589999999864 3456777655 667999999999986
No 126
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.12 E-value=9.3e-11 Score=98.35 Aligned_cols=129 Identities=18% Similarity=0.110 Sum_probs=88.6
Q ss_pred CccccChhHHHHHHHHhhcccCCCCcHH-HHHHHHHHH----HhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEE
Q 027409 1 MKLVWSPDAASKAYIDTVKSCENIKESG-VAELLSAMA----AGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCI 75 (223)
Q Consensus 1 ~~~~w~~~~a~~ayl~~l~~~~~ii~p~-~g~fL~~L~----~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TI 75 (223)
|...|+ ..+..|-..... .++ ...++..++ ......+|||||||+|. .++.++.. +++++.+
T Consensus 1 m~~~~~--~~a~~y~~~~~~-----~~~~~~~~~~~l~~~~~~~~~~~~vLDiG~G~G~--~~~~l~~~----~~~v~~v 67 (263)
T 2yqz_A 1 MSSALL--RAAYAYDRLRAH-----PPEVAGQIATAMASAVHPKGEEPVFLELGVGTGR--IALPLIAR----GYRYIAL 67 (263)
T ss_dssp -CHHHH--HHHHHHHHHHCC-----CHHHHHHHHHHHHHHCCCSSSCCEEEEETCTTST--THHHHHTT----TCEEEEE
T ss_pred CCCchH--HHHHHHhhhccc-----ChHHHHHHHHHHHHhhcCCCCCCEEEEeCCcCCH--HHHHHHHC----CCEEEEE
Confidence 344454 345667665321 223 344444443 23567899999999998 66666532 6799999
Q ss_pred eCCchHHHHHHHHHHhhcCce-EEEEecchHHHhcC-CCCccEEEEeCCCc---ccHHHHHHh-ccCCCceEEEEe
Q 027409 76 VPDERSRLAYVKAMYDVVGWV-SEVIVRQAEEVMGE-LKGVDFLVVDCTSK---DFARVLRFA-RFSNKGAVLAFK 145 (223)
Q Consensus 76 E~d~e~~~~Ar~~~~~a~G~~-I~li~GdA~evL~~-L~~fDfVFIDa~K~---~Y~~~f~~~-~~l~~GgvIV~D 145 (223)
|+++++++.|++++ .. +.. ++++.+|+.+ ++- -+.||+|+....-. +...++..+ +.++|||.+++-
T Consensus 68 D~s~~~~~~a~~~~-~~-~~~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 68 DADAAMLEVFRQKI-AG-VDRKVQVVQADARA-IPLPDESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp ESCHHHHHHHHHHT-TT-SCTTEEEEESCTTS-CCSCTTCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred ECCHHHHHHHHHHh-hc-cCCceEEEEccccc-CCCCCCCeeEEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 99999999999998 43 344 9999999965 332 24799999976533 336677654 677999998875
No 127
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.12 E-value=2.3e-10 Score=104.51 Aligned_cols=101 Identities=13% Similarity=0.179 Sum_probs=79.9
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce---EEEEecchHHHhcCC----C
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV---SEVIVRQAEEVMGEL----K 112 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~---I~li~GdA~evL~~L----~ 112 (223)
.+.++||++|||+|. .++++|.. ...+|+.+|.++++++.|++|++.. |+. ++++.||+.+.++.+ .
T Consensus 211 ~~~~~VLDl~cGtG~--~sl~la~~---ga~~V~~vD~s~~al~~A~~N~~~n-~~~~~~v~~~~~D~~~~l~~~~~~~~ 284 (385)
T 2b78_A 211 AAGKTVLNLFSYTAA--FSVAAAMG---GAMATTSVDLAKRSRALSLAHFEAN-HLDMANHQLVVMDVFDYFKYARRHHL 284 (385)
T ss_dssp TBTCEEEEETCTTTH--HHHHHHHT---TBSEEEEEESCTTHHHHHHHHHHHT-TCCCTTEEEEESCHHHHHHHHHHTTC
T ss_pred cCCCeEEEEeeccCH--HHHHHHHC---CCCEEEEEECCHHHHHHHHHHHHHc-CCCccceEEEECCHHHHHHHHHHhCC
Confidence 577899999999997 77777642 1248999999999999999999998 873 999999999988754 3
Q ss_pred CccEEEEeCCC-----c-------ccHHHHHHh-ccCCCceEEEEeC
Q 027409 113 GVDFLVVDCTS-----K-------DFARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 113 ~fDfVFIDa~K-----~-------~Y~~~f~~~-~~l~~GgvIV~DN 146 (223)
.||+|++|.-. . .|.+++..+ +.++|||++++..
T Consensus 285 ~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~ 331 (385)
T 2b78_A 285 TYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIAST 331 (385)
T ss_dssp CEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 79999999543 1 244455433 6779999988765
No 128
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.12 E-value=2.8e-10 Score=92.48 Aligned_cols=114 Identities=8% Similarity=0.027 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHH
Q 027409 27 SGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEE 106 (223)
Q Consensus 27 p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~e 106 (223)
+...+++..+.......+|||||||.|. .++.++.. .+.+++.+|.++++++.|++++++. +..++++.+|+.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~--~~~~~~~~---~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~~d~~~ 82 (209)
T 2p8j_A 9 PQLYRFLKYCNESNLDKTVLDCGAGGDL--PPLSIFVE---DGYKTYGIEISDLQLKKAENFSREN-NFKLNISKGDIRK 82 (209)
T ss_dssp THHHHHHHHHHHSSSCSEEEEESCCSSS--CTHHHHHH---TTCEEEEEECCHHHHHHHHHHHHHH-TCCCCEEECCTTS
T ss_pred hhHHHHHHHHhccCCCCEEEEECCCCCH--HHHHHHHh---CCCEEEEEECCHHHHHHHHHHHHhc-CCceEEEECchhh
Confidence 3466788888888888999999999997 43333311 3579999999999999999999988 7669999999976
Q ss_pred HhcC-CCCccEEEEeCCC-----cccHHHHHHh-ccCCCceEEEEeCC
Q 027409 107 VMGE-LKGVDFLVVDCTS-----KDFARVLRFA-RFSNKGAVLAFKNA 147 (223)
Q Consensus 107 vL~~-L~~fDfVFIDa~K-----~~Y~~~f~~~-~~l~~GgvIV~DNv 147 (223)
++- -+.||+|+....- ++...+++.+ +.++|||.+++...
T Consensus 83 -~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 129 (209)
T 2p8j_A 83 -LPFKDESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFL 129 (209)
T ss_dssp -CCSCTTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -CCCCCCceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 332 2479999976432 3445666644 66799999888654
No 129
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.11 E-value=3e-10 Score=105.65 Aligned_cols=118 Identities=14% Similarity=0.122 Sum_probs=91.5
Q ss_pred CcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEecc
Q 027409 25 KESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVRQ 103 (223)
Q Consensus 25 i~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~Gd 103 (223)
++....+++..++......+|||+|||.|. .|+.+|.. .+..|+|+.+|+++++++.+++++++. |+. |+++.+|
T Consensus 243 ~qd~~s~l~~~~l~~~~g~~VLDlgaG~G~--~t~~la~~-~~~~~~v~a~D~s~~~l~~~~~~~~~~-g~~~v~~~~~D 318 (450)
T 2yxl_A 243 VQEEASAVASIVLDPKPGETVVDLAAAPGG--KTTHLAEL-MKNKGKIYAFDVDKMRMKRLKDFVKRM-GIKIVKPLVKD 318 (450)
T ss_dssp ECCHHHHHHHHHHCCCTTCEEEESSCTTCH--HHHHHHHH-TTTCSEEEEECSCHHHHHHHHHHHHHT-TCCSEEEECSC
T ss_pred ecCchhHHHHHhcCCCCcCEEEEeCCCccH--HHHHHHHH-cCCCCEEEEEcCCHHHHHHHHHHHHHc-CCCcEEEEEcC
Confidence 455566777777777777899999999997 77777754 343489999999999999999999999 997 9999999
Q ss_pred hHHHhcCC--CCccEEEEeCCCccc-------------------------HHHHHHh-ccCCCceEEEEeC
Q 027409 104 AEEVMGEL--KGVDFLVVDCTSKDF-------------------------ARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 104 A~evL~~L--~~fDfVFIDa~K~~Y-------------------------~~~f~~~-~~l~~GgvIV~DN 146 (223)
+.+..+.+ +.||.|++|+--... ..+++.+ +.++|||.+|.-.
T Consensus 319 ~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~t 389 (450)
T 2yxl_A 319 ARKAPEIIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTT 389 (450)
T ss_dssp TTCCSSSSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhhcchhhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 98865445 369999999643211 4566644 6679999888654
No 130
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.11 E-value=1.3e-09 Score=93.46 Aligned_cols=115 Identities=10% Similarity=0.033 Sum_probs=88.1
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCc----e-EE
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGW----V-SE 98 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~----~-I~ 98 (223)
.-.....++|..++...++++|||||||+|. .++.|+.. +.+++.+|+++++++.|+++..+. +. . ++
T Consensus 40 ~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~--~~~~l~~~----~~~v~gvD~s~~~l~~a~~~~~~~-~~~~~~~~~~ 112 (293)
T 3thr_A 40 SRTAEYKAWLLGLLRQHGCHRVLDVACGTGV--DSIMLVEE----GFSVTSVDASDKMLKYALKERWNR-RKEPAFDKWV 112 (293)
T ss_dssp CBCHHHHHHHHHHHHHTTCCEEEETTCTTSH--HHHHHHHT----TCEEEEEESCHHHHHHHHHHHHHT-TTSHHHHTCE
T ss_pred chHHHHHHHHHHHhcccCCCEEEEecCCCCH--HHHHHHHC----CCeEEEEECCHHHHHHHHHhhhhc-ccccccceee
Confidence 4455677888888888899999999999998 67777643 459999999999999999998654 32 2 89
Q ss_pred EEecchHHHhcC---CCCccEEEEeC-C----------CcccHHHHHHh-ccCCCceEEEEe
Q 027409 99 VIVRQAEEVMGE---LKGVDFLVVDC-T----------SKDFARVLRFA-RFSNKGAVLAFK 145 (223)
Q Consensus 99 li~GdA~evL~~---L~~fDfVFIDa-~----------K~~Y~~~f~~~-~~l~~GgvIV~D 145 (223)
+..+|+.+.-.. -+.||+|++-+ . .++...++..+ +.|+|||.++..
T Consensus 113 ~~~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (293)
T 3thr_A 113 IEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVID 174 (293)
T ss_dssp EEECCGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred EeecChhhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 999999885422 25899999852 1 23356677654 678999999875
No 131
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.11 E-value=3.5e-10 Score=92.10 Aligned_cols=107 Identities=12% Similarity=-0.008 Sum_probs=81.6
Q ss_pred HHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEecchHHH
Q 027409 29 VAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVRQAEEV 107 (223)
Q Consensus 29 ~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~GdA~ev 107 (223)
...++..+.......+|||||||+|. .+.+++.. +.+++.+|+++++++.|++ . |.. ++++.+|+.+.
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G~G~--~~~~l~~~----~~~v~~~D~s~~~~~~a~~----~-~~~~~~~~~~d~~~~ 102 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASGTGY--WTRHLSGL----ADRVTALDGSAEMIAEAGR----H-GLDNVEFRQQDLFDW 102 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCTTSH--HHHHHHHH----SSEEEEEESCHHHHHHHGG----G-CCTTEEEEECCTTSC
T ss_pred HHHHHHHHhcCCCCCeEEEECCCCCH--HHHHHHhc----CCeEEEEeCCHHHHHHHHh----c-CCCCeEEEecccccC
Confidence 44566666666677899999999998 67677654 5799999999999999998 5 655 99999999876
Q ss_pred hcCCCCccEEEEeCCCccc-----HHHHHHh-ccCCCceEEEEeCC
Q 027409 108 MGELKGVDFLVVDCTSKDF-----ARVLRFA-RFSNKGAVLAFKNA 147 (223)
Q Consensus 108 L~~L~~fDfVFIDa~K~~Y-----~~~f~~~-~~l~~GgvIV~DNv 147 (223)
..-+.||+|+....-... ..+++.+ +.++|||.++.-..
T Consensus 103 -~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 147 (218)
T 3ou2_A 103 -TPDRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDV 147 (218)
T ss_dssp -CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -CCCCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 222589999998654433 5566644 56799998876643
No 132
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.10 E-value=4.8e-10 Score=102.86 Aligned_cols=103 Identities=16% Similarity=0.111 Sum_probs=84.2
Q ss_pred hcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhc--------------Cce-EEEEecc
Q 027409 39 GWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVV--------------GWV-SEVIVRQ 103 (223)
Q Consensus 39 ~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~--------------G~~-I~li~Gd 103 (223)
.....+|||+|||+|+ .+|.+|... +..+|+.+|+|++.++.|++|++... |++ |+++.||
T Consensus 45 ~~~~~~VLDl~aGtG~--~~l~~a~~~--~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~D 120 (378)
T 2dul_A 45 ILNPKIVLDALSATGI--RGIRFALET--PAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDD 120 (378)
T ss_dssp HHCCSEEEESSCTTSH--HHHHHHHHS--SCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESC
T ss_pred HcCCCEEEECCCchhH--HHHHHHHhC--CCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCc
Confidence 3478899999999998 888877543 24689999999999999999998751 566 9999999
Q ss_pred hHHHhcCC-CCccEEEEeCCCcccHHHHHH-hccCCCceEEEEeC
Q 027409 104 AEEVMGEL-KGVDFLVVDCTSKDFARVLRF-ARFSNKGAVLAFKN 146 (223)
Q Consensus 104 A~evL~~L-~~fDfVFIDa~K~~Y~~~f~~-~~~l~~GgvIV~DN 146 (223)
|.+.+..+ ..||+||+|. .....++++. ++.+++||+|.+..
T Consensus 121 a~~~~~~~~~~fD~I~lDP-~~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 121 ANRLMAERHRYFHFIDLDP-FGSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHHHHHHSTTCEEEEEECC-SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHhccCCCCEEEeCC-CCCHHHHHHHHHHhcCCCCEEEEEe
Confidence 99988765 4799999997 4555788885 46779999987753
No 133
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.10 E-value=3e-10 Score=96.09 Aligned_cols=101 Identities=19% Similarity=0.122 Sum_probs=78.6
Q ss_pred HHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEecchHHHhcCC-CC
Q 027409 36 MAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVRQAEEVMGEL-KG 113 (223)
Q Consensus 36 L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~GdA~evL~~L-~~ 113 (223)
.+......+|||||||+|. .+..++.. .++++.+|+++++++.|++++++. |+. ++++.||+.+ ++-- +.
T Consensus 32 ~l~~~~~~~vLDiGcG~G~--~~~~l~~~----~~~v~gvD~s~~~l~~a~~~~~~~-~~~~v~~~~~d~~~-l~~~~~~ 103 (260)
T 1vl5_A 32 IAALKGNEEVLDVATGGGH--VANAFAPF----VKKVVAFDLTEDILKVARAFIEGN-GHQQVEYVQGDAEQ-MPFTDER 103 (260)
T ss_dssp HHTCCSCCEEEEETCTTCH--HHHHHGGG----SSEEEEEESCHHHHHHHHHHHHHT-TCCSEEEEECCC-C-CCSCTTC
T ss_pred HhCCCCCCEEEEEeCCCCH--HHHHHHHh----CCEEEEEeCCHHHHHHHHHHHHhc-CCCceEEEEecHHh-CCCCCCC
Confidence 3355678999999999998 66666532 359999999999999999999998 988 9999999976 3422 47
Q ss_pred ccEEEEeCCCc---ccHHHHHHh-ccCCCceEEEE
Q 027409 114 VDFLVVDCTSK---DFARVLRFA-RFSNKGAVLAF 144 (223)
Q Consensus 114 fDfVFIDa~K~---~Y~~~f~~~-~~l~~GgvIV~ 144 (223)
||+|+....-. +...+|..+ +.|+|||.+++
T Consensus 104 fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~ 138 (260)
T 1vl5_A 104 FHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLL 138 (260)
T ss_dssp EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEE
Confidence 99999886443 335677644 67799998877
No 134
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.10 E-value=2.6e-10 Score=93.63 Aligned_cols=101 Identities=20% Similarity=0.121 Sum_probs=78.2
Q ss_pred hcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCc------eEEEEecchHHHhcCCC
Q 027409 39 GWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGW------VSEVIVRQAEEVMGELK 112 (223)
Q Consensus 39 ~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~------~I~li~GdA~evL~~L~ 112 (223)
.....+|||||||+|. .+++++.. +.+++.+|+++++++.|+++++.. ++ .++++.+|+.+.-..-+
T Consensus 28 ~~~~~~vLdiG~G~G~--~~~~l~~~----~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~d~~~~~~~~~ 100 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGK--ISLELASK----GYSVTGIDINSEAIRLAETAARSP-GLNQKTGGKAEFKVENASSLSFHDS 100 (235)
T ss_dssp CCTTCEEEEETCTTSH--HHHHHHHT----TCEEEEEESCHHHHHHHHHHTTCC-SCCSSSSCEEEEEECCTTSCCSCTT
T ss_pred CCCCCeEEEECCCCCH--HHHHHHhC----CCeEEEEECCHHHHHHHHHHHHhc-CCccccCcceEEEEecccccCCCCC
Confidence 3467899999999998 67677643 679999999999999999999987 77 38999999976321224
Q ss_pred CccEEEEeCCC------cccHHHHHHh-ccCCCceEEEEeC
Q 027409 113 GVDFLVVDCTS------KDFARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 113 ~fDfVFIDa~K------~~Y~~~f~~~-~~l~~GgvIV~DN 146 (223)
.||+|+....- .....+++.+ +.|+|||.++.-.
T Consensus 101 ~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 101 SFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVE 141 (235)
T ss_dssp CEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 79999997633 3333677755 6679999888754
No 135
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.09 E-value=6.6e-10 Score=95.71 Aligned_cols=104 Identities=12% Similarity=-0.033 Sum_probs=80.9
Q ss_pred HhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCC-CCc
Q 027409 38 AGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGEL-KGV 114 (223)
Q Consensus 38 ~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L-~~f 114 (223)
......+|||||||.|. .+..++... +++++.+|+++++++.|+++++.. |+. ++++.+|+.+ ++-- +.|
T Consensus 79 ~~~~~~~vLDiGcG~G~--~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~~~~~~~d~~~-~~~~~~~f 151 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGG--AARFLVRKF---GVSIDCLNIAPVQNKRNEEYNNQA-GLADNITVKYGSFLE-IPCEDNSY 151 (297)
T ss_dssp CCCTTCEEEEETCTTSH--HHHHHHHHH---CCEEEEEESCHHHHHHHHHHHHHH-TCTTTEEEEECCTTS-CSSCTTCE
T ss_pred CCCCCCEEEEeCCCCCH--HHHHHHHHh---CCEEEEEeCCHHHHHHHHHHHHhc-CCCcceEEEEcCccc-CCCCCCCE
Confidence 33467899999999998 676776543 469999999999999999999998 886 9999999977 3321 479
Q ss_pred cEEEEeCCCcc---cHHHHHHh-ccCCCceEEEEeCCC
Q 027409 115 DFLVVDCTSKD---FARVLRFA-RFSNKGAVLAFKNAF 148 (223)
Q Consensus 115 DfVFIDa~K~~---Y~~~f~~~-~~l~~GgvIV~DNvl 148 (223)
|+|+.-..-.+ ...+|..+ +.|+|||.++.-...
T Consensus 152 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 189 (297)
T 2o57_A 152 DFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPM 189 (297)
T ss_dssp EEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred eEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEec
Confidence 99998754333 46777654 677999988876543
No 136
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.09 E-value=2.3e-10 Score=95.43 Aligned_cols=99 Identities=7% Similarity=-0.131 Sum_probs=77.6
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCCCCccEE
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGELKGVDFL 117 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L~~fDfV 117 (223)
.++.+|||||||+|+ .+++|+ ..+++++.+|++++.++.|++++... +.. ++++.+|+.+..+ -..||+|
T Consensus 65 ~~~~~vLDiGcG~G~--~~~~l~----~~~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~v~~~~~d~~~~~~-~~~fD~v 136 (235)
T 3lcc_A 65 LPLGRALVPGCGGGH--DVVAMA----SPERFVVGLDISESALAKANETYGSS-PKAEYFSFVKEDVFTWRP-TELFDLI 136 (235)
T ss_dssp SCCEEEEEETCTTCH--HHHHHC----BTTEEEEEECSCHHHHHHHHHHHTTS-GGGGGEEEECCCTTTCCC-SSCEEEE
T ss_pred CCCCCEEEeCCCCCH--HHHHHH----hCCCeEEEEECCHHHHHHHHHHhhcc-CCCcceEEEECchhcCCC-CCCeeEE
Confidence 356799999999998 666663 24789999999999999999999986 654 9999999988432 2479999
Q ss_pred EEeCC-----CcccHHHHHHh-ccCCCceEEEEeC
Q 027409 118 VVDCT-----SKDFARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 118 FIDa~-----K~~Y~~~f~~~-~~l~~GgvIV~DN 146 (223)
+.-.. .++...+++.+ +.|+|||.+++-.
T Consensus 137 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 171 (235)
T 3lcc_A 137 FDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLM 171 (235)
T ss_dssp EEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEE
Confidence 96542 34667788755 6679999988743
No 137
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.09 E-value=2.9e-09 Score=86.85 Aligned_cols=111 Identities=15% Similarity=0.171 Sum_probs=84.6
Q ss_pred CCcHHHHHHHHHHHHh---cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEE
Q 027409 24 IKESGVAELLSAMAAG---WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVI 100 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~---~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li 100 (223)
...+...+.+..++.. ...++|||+|||+|. .++.++.. ..++++.+|+++++++.|+++++.. |+.++++
T Consensus 29 ~~~~~~~~~l~~~~~~~~~~~~~~vlD~g~G~G~--~~~~l~~~---~~~~v~~vD~~~~~~~~a~~~~~~~-~~~~~~~ 102 (207)
T 1wy7_A 29 RTPGNAASELLWLAYSLGDIEGKVVADLGAGTGV--LSYGALLL---GAKEVICVEVDKEAVDVLIENLGEF-KGKFKVF 102 (207)
T ss_dssp CCCHHHHHHHHHHHHHTTSSTTCEEEEETCTTCH--HHHHHHHT---TCSEEEEEESCHHHHHHHHHHTGGG-TTSEEEE
T ss_pred cCchHHHHHHHHHHHHcCCCCcCEEEEeeCCCCH--HHHHHHHc---CCCEEEEEECCHHHHHHHHHHHHHc-CCCEEEE
Confidence 4566676666665553 357899999999998 77777643 2358999999999999999999998 8789999
Q ss_pred ecchHHHhcCCCCccEEEEeCC-----CcccHHHHHHh-ccCCCceEEEEe
Q 027409 101 VRQAEEVMGELKGVDFLVVDCT-----SKDFARVLRFA-RFSNKGAVLAFK 145 (223)
Q Consensus 101 ~GdA~evL~~L~~fDfVFIDa~-----K~~Y~~~f~~~-~~l~~GgvIV~D 145 (223)
.||+.+ ++ ..||+|++|.- +.....+++.+ +.+ |++.+..
T Consensus 103 ~~d~~~-~~--~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l--~~~~~~~ 148 (207)
T 1wy7_A 103 IGDVSE-FN--SRVDIVIMNPPFGSQRKHADRPFLLKAFEIS--DVVYSIH 148 (207)
T ss_dssp ESCGGG-CC--CCCSEEEECCCCSSSSTTTTHHHHHHHHHHC--SEEEEEE
T ss_pred ECchHH-cC--CCCCEEEEcCCCccccCCchHHHHHHHHHhc--CcEEEEE
Confidence 999988 34 37999999963 34556777644 455 6766655
No 138
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.08 E-value=6.4e-10 Score=96.23 Aligned_cols=110 Identities=12% Similarity=0.025 Sum_probs=82.5
Q ss_pred HHHHHHHhcCC-CeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHh
Q 027409 32 LLSAMAAGWNA-KLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVM 108 (223)
Q Consensus 32 fL~~L~~~~~a-k~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL 108 (223)
=|..++...++ .+||+|||+.|| .++++|. ..+.++|+.+|+|+..++.|++|+++. |++ |+++.||+++.+
T Consensus 11 RL~~i~~~v~~g~~VlDIGtGsG~--l~i~la~--~~~~~~V~AvDi~~~al~~A~~N~~~~-gl~~~I~~~~gD~l~~~ 85 (230)
T 3lec_A 11 RLQKVANYVPKGARLLDVGSDHAY--LPIFLLQ--MGYCDFAIAGEVVNGPYQSALKNVSEH-GLTSKIDVRLANGLSAF 85 (230)
T ss_dssp HHHHHHTTSCTTEEEEEETCSTTH--HHHHHHH--TTCEEEEEEEESSHHHHHHHHHHHHHT-TCTTTEEEEECSGGGGC
T ss_pred HHHHHHHhCCCCCEEEEECCchHH--HHHHHHH--hCCCCEEEEEECCHHHHHHHHHHHHHc-CCCCcEEEEECchhhcc
Confidence 35666666654 589999999999 7777764 334578999999999999999999999 987 999999999987
Q ss_pred cCCCCccEEEEeCC-CcccHHHHHHh-ccCCCceE-EEEeC
Q 027409 109 GELKGVDFLVVDCT-SKDFARVLRFA-RFSNKGAV-LAFKN 146 (223)
Q Consensus 109 ~~L~~fDfVFIDa~-K~~Y~~~f~~~-~~l~~Ggv-IV~DN 146 (223)
..-++||.|+|-.- .+.-.++++.. ..++++|. |+.-|
T Consensus 86 ~~~~~~D~IviaGmGg~lI~~IL~~~~~~l~~~~~lIlqp~ 126 (230)
T 3lec_A 86 EEADNIDTITICGMGGRLIADILNNDIDKLQHVKTLVLQPN 126 (230)
T ss_dssp CGGGCCCEEEEEEECHHHHHHHHHHTGGGGTTCCEEEEEES
T ss_pred ccccccCEEEEeCCchHHHHHHHHHHHHHhCcCCEEEEECC
Confidence 64337999998543 23345666654 34556554 44444
No 139
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.08 E-value=4.3e-10 Score=95.40 Aligned_cols=101 Identities=11% Similarity=-0.011 Sum_probs=78.3
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhh-------cCce-EEEEecchHHHhcC-
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDV-------VGWV-SEVIVRQAEEVMGE- 110 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a-------~G~~-I~li~GdA~evL~~- 110 (223)
.+..+|||||||+|. .++.+|... +++.++.||+++++++.|+++++.. .|+. ++++.+|+.+.|+.
T Consensus 48 ~~~~~vLDiGcG~G~--~~~~la~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~ 123 (246)
T 2vdv_E 48 TKKVTIADIGCGFGG--LMIDLSPAF--PEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNF 123 (246)
T ss_dssp SCCEEEEEETCTTSH--HHHHHHHHS--TTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGT
T ss_pred CCCCEEEEEcCCCCH--HHHHHHHhC--CCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHh
Confidence 356789999999998 777777543 4679999999999999999998753 0555 99999999987775
Q ss_pred C--CCccEEEEeCCCcc-----------cHHHHHHh-ccCCCceEEEE
Q 027409 111 L--KGVDFLVVDCTSKD-----------FARVLRFA-RFSNKGAVLAF 144 (223)
Q Consensus 111 L--~~fDfVFIDa~K~~-----------Y~~~f~~~-~~l~~GgvIV~ 144 (223)
+ ..+|.||+.-.... |..++..+ +.|+|||++++
T Consensus 124 ~~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~ 171 (246)
T 2vdv_E 124 FEKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYT 171 (246)
T ss_dssp SCTTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEE
T ss_pred ccccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEE
Confidence 3 37999987642222 36788755 67899999876
No 140
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.08 E-value=8e-10 Score=90.66 Aligned_cols=109 Identities=13% Similarity=-0.018 Sum_probs=79.6
Q ss_pred HHHHHHHHHhc-CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHh
Q 027409 30 AELLSAMAAGW-NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVM 108 (223)
Q Consensus 30 g~fL~~L~~~~-~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL 108 (223)
..++..+.... ...+|||||||+|. .+++++.. +.+++.+|+++++++.|+++++.. +..++++.+|+.+.
T Consensus 26 ~~~~~~l~~~~~~~~~vLDlG~G~G~--~~~~l~~~----~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~~d~~~~- 97 (227)
T 1ve3_A 26 ETLEPLLMKYMKKRGKVLDLACGVGG--FSFLLEDY----GFEVVGVDISEDMIRKAREYAKSR-ESNVEFIVGDARKL- 97 (227)
T ss_dssp HHHHHHHHHSCCSCCEEEEETCTTSH--HHHHHHHT----TCEEEEEESCHHHHHHHHHHHHHT-TCCCEEEECCTTSC-
T ss_pred HHHHHHHHHhcCCCCeEEEEeccCCH--HHHHHHHc----CCEEEEEECCHHHHHHHHHHHHhc-CCCceEEECchhcC-
Confidence 34444454433 46899999999997 66676643 239999999999999999999988 75599999998772
Q ss_pred cC-CCCccEEEEeCC--C---cccHHHHHHh-ccCCCceEEEEeC
Q 027409 109 GE-LKGVDFLVVDCT--S---KDFARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 109 ~~-L~~fDfVFIDa~--K---~~Y~~~f~~~-~~l~~GgvIV~DN 146 (223)
+- -+.||+|+.... - .+...+++.+ +.++|||.++...
T Consensus 98 ~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 142 (227)
T 1ve3_A 98 SFEDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYF 142 (227)
T ss_dssp CSCTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 31 147999998754 1 2335566644 5679999887653
No 141
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.07 E-value=5.3e-10 Score=92.89 Aligned_cols=100 Identities=15% Similarity=0.067 Sum_probs=76.7
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHH--hcCC-CCccEE
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEV--MGEL-KGVDFL 117 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~ev--L~~L-~~fDfV 117 (223)
...+|||+|||+|+ .+++++... .++++++.+|.++++++.++++.++. -.++++.+|+.+. +..+ +.||+|
T Consensus 73 ~~~~vLDlG~G~G~--~~~~la~~~-~~~~~v~~vD~s~~~~~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~D~v 147 (227)
T 1g8a_A 73 PGKSVLYLGIASGT--TASHVSDIV-GWEGKIFGIEFSPRVLRELVPIVEER--RNIVPILGDATKPEEYRALVPKVDVI 147 (227)
T ss_dssp TTCEEEEETTTSTT--HHHHHHHHH-CTTSEEEEEESCHHHHHHHHHHHSSC--TTEEEEECCTTCGGGGTTTCCCEEEE
T ss_pred CCCEEEEEeccCCH--HHHHHHHHh-CCCeEEEEEECCHHHHHHHHHHHhcc--CCCEEEEccCCCcchhhcccCCceEE
Confidence 46799999999998 777887553 23589999999999999999987754 1289999999873 2334 479999
Q ss_pred EEeCCCcccHHH-HHHh-ccCCCceEEEEe
Q 027409 118 VVDCTSKDFARV-LRFA-RFSNKGAVLAFK 145 (223)
Q Consensus 118 FIDa~K~~Y~~~-f~~~-~~l~~GgvIV~D 145 (223)
|.|......... +..+ +.|+|||.++.-
T Consensus 148 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 148 FEDVAQPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp EECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCCCHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 999864444333 6644 678999988875
No 142
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.07 E-value=7.4e-10 Score=89.93 Aligned_cols=109 Identities=13% Similarity=-0.013 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHH
Q 027409 27 SGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEE 106 (223)
Q Consensus 27 p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~e 106 (223)
+...++|..++... ..+|||||||+|. .+.+|+.. +.+++.+|+++++++.|++++.+ ++++.+|+.+
T Consensus 28 ~~~~~~l~~~~~~~-~~~vLDiGcG~G~--~~~~l~~~----~~~v~gvD~s~~~~~~a~~~~~~-----~~~~~~d~~~ 95 (203)
T 3h2b_A 28 DPDRVLIEPWATGV-DGVILDVGSGTGR--WTGHLASL----GHQIEGLEPATRLVELARQTHPS-----VTFHHGTITD 95 (203)
T ss_dssp CTTHHHHHHHHHHC-CSCEEEETCTTCH--HHHHHHHT----TCCEEEECCCHHHHHHHHHHCTT-----SEEECCCGGG
T ss_pred HHHHHHHHHHhccC-CCeEEEecCCCCH--HHHHHHhc----CCeEEEEeCCHHHHHHHHHhCCC-----CeEEeCcccc
Confidence 44556666666655 8899999999998 67677643 56899999999999999987432 6999999987
Q ss_pred HhcCCCCccEEEEeCC-----CcccHHHHHHh-ccCCCceEEEEeCC
Q 027409 107 VMGELKGVDFLVVDCT-----SKDFARVLRFA-RFSNKGAVLAFKNA 147 (223)
Q Consensus 107 vL~~L~~fDfVFIDa~-----K~~Y~~~f~~~-~~l~~GgvIV~DNv 147 (223)
.-..-+.||+|+.... .++...+++.+ +.++|||.++....
T Consensus 96 ~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 142 (203)
T 3h2b_A 96 LSDSPKRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFF 142 (203)
T ss_dssp GGGSCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cccCCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 4212258999999763 34557778755 67799999987653
No 143
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.07 E-value=3.4e-10 Score=102.92 Aligned_cols=111 Identities=16% Similarity=0.146 Sum_probs=84.3
Q ss_pred HHHHHHHH---HHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecc
Q 027409 29 VAELLSAM---AAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQ 103 (223)
Q Consensus 29 ~g~fL~~L---~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~Gd 103 (223)
...+...+ ....+.++|||||||+|. .++.+|.+ ...+|+.+|.+ ++++.|+++++.. |+. |+++.||
T Consensus 48 ~~~~~~~i~~~~~~~~~~~VLDlGcGtG~--ls~~la~~---g~~~V~gvD~s-~~~~~a~~~~~~~-~~~~~v~~~~~d 120 (376)
T 3r0q_C 48 MDAYFNAVFQNKHHFEGKTVLDVGTGSGI--LAIWSAQA---GARKVYAVEAT-KMADHARALVKAN-NLDHIVEVIEGS 120 (376)
T ss_dssp HHHHHHHHHTTTTTTTTCEEEEESCTTTH--HHHHHHHT---TCSEEEEEESS-TTHHHHHHHHHHT-TCTTTEEEEESC
T ss_pred HHHHHHHHHhccccCCCCEEEEeccCcCH--HHHHHHhc---CCCEEEEEccH-HHHHHHHHHHHHc-CCCCeEEEEECc
Confidence 33444444 344577899999999998 77777654 12499999999 9999999999998 887 9999999
Q ss_pred hHHHhcCCCCccEEEEeCC------CcccHHHHHHh-ccCCCceEEEEeCC
Q 027409 104 AEEVMGELKGVDFLVVDCT------SKDFARVLRFA-RFSNKGAVLAFKNA 147 (223)
Q Consensus 104 A~evL~~L~~fDfVFIDa~------K~~Y~~~f~~~-~~l~~GgvIV~DNv 147 (223)
+.+.... +.||+|+.+.- ......++..+ +.|+|||+++.+..
T Consensus 121 ~~~~~~~-~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~ 170 (376)
T 3r0q_C 121 VEDISLP-EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHA 170 (376)
T ss_dssp GGGCCCS-SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEE
T ss_pred hhhcCcC-CcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecC
Confidence 9875322 68999999751 12344566655 67799999988653
No 144
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.07 E-value=1.1e-09 Score=101.50 Aligned_cols=109 Identities=12% Similarity=0.012 Sum_probs=87.7
Q ss_pred HHHHHHHHHHhc---CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEecch
Q 027409 29 VAELLSAMAAGW---NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVRQA 104 (223)
Q Consensus 29 ~g~fL~~L~~~~---~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~GdA 104 (223)
+..++..++... +..+|||+|||+|+ .+++||.. .++|+.+|.+++.++.|++|.+.. |+. ++++.||+
T Consensus 271 ~e~l~~~~~~~l~~~~~~~VLDlgcG~G~--~~~~la~~----~~~V~gvD~s~~al~~A~~n~~~~-~~~~v~f~~~d~ 343 (433)
T 1uwv_A 271 NQKMVARALEWLDVQPEDRVLDLFCGMGN--FTLPLATQ----AASVVGVEGVPALVEKGQQNARLN-GLQNVTFYHENL 343 (433)
T ss_dssp HHHHHHHHHHHHTCCTTCEEEEESCTTTT--THHHHHTT----SSEEEEEESCHHHHHHHHHHHHHT-TCCSEEEEECCT
T ss_pred HHHHHHHHHHhhcCCCCCEEEECCCCCCH--HHHHHHhh----CCEEEEEeCCHHHHHHHHHHHHHc-CCCceEEEECCH
Confidence 445555554443 55799999999998 77777642 579999999999999999999998 987 99999999
Q ss_pred HHHhcCC----CCccEEEEeCCCcccHHHHHHhccCCCceEEEE
Q 027409 105 EEVMGEL----KGVDFLVVDCTSKDFARVLRFARFSNKGAVLAF 144 (223)
Q Consensus 105 ~evL~~L----~~fDfVFIDa~K~~Y~~~f~~~~~l~~GgvIV~ 144 (223)
.+.++.+ +.||+|++|--.....+.++.+..++++++|.+
T Consensus 344 ~~~l~~~~~~~~~fD~Vv~dPPr~g~~~~~~~l~~~~p~~ivyv 387 (433)
T 1uwv_A 344 EEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYV 387 (433)
T ss_dssp TSCCSSSGGGTTCCSEEEECCCTTCCHHHHHHHHHHCCSEEEEE
T ss_pred HHHhhhhhhhcCCCCEEEECCCCccHHHHHHHHHhcCCCeEEEE
Confidence 9987763 379999999877766777777666678887754
No 145
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.07 E-value=3.5e-10 Score=98.97 Aligned_cols=101 Identities=10% Similarity=-0.073 Sum_probs=78.7
Q ss_pred hcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCC-CCcc
Q 027409 39 GWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGEL-KGVD 115 (223)
Q Consensus 39 ~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L-~~fD 115 (223)
.....+|||||||+|. .++.++... +++++.+|+++++++.|++++++. |+. ++++.||+.+. +-- +.||
T Consensus 115 ~~~~~~vLDiGcG~G~--~~~~la~~~---~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~v~~~~~d~~~~-~~~~~~fD 187 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGG--SMVMAHRRF---GSRVEGVTLSAAQADFGNRRAREL-RIDDHVRSRVCNMLDT-PFDKGAVT 187 (312)
T ss_dssp CCTTCEEEEESCTTSH--HHHHHHHHH---CCEEEEEESCHHHHHHHHHHHHHT-TCTTTEEEEECCTTSC-CCCTTCEE
T ss_pred CCCCCEEEEecCCCCH--HHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHc-CCCCceEEEECChhcC-CCCCCCEe
Confidence 3456799999999998 777777542 579999999999999999999999 987 99999999763 321 4799
Q ss_pred EEEEeCCCc--ccHHHHHHh-ccCCCceEEEEeC
Q 027409 116 FLVVDCTSK--DFARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 116 fVFIDa~K~--~Y~~~f~~~-~~l~~GgvIV~DN 146 (223)
+|+.-..-. ....+|+.+ +.|+|||.++.-.
T Consensus 188 ~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 188 ASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 998753211 267778755 6779999887544
No 146
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.06 E-value=4.2e-10 Score=101.17 Aligned_cols=103 Identities=15% Similarity=0.088 Sum_probs=81.1
Q ss_pred HHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCCCCc
Q 027409 37 AAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGELKGV 114 (223)
Q Consensus 37 ~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L~~f 114 (223)
....+.++|||||||+|+ .++.+|.+ ..++|+.+|.+ ++++.|+++.+.. |+. |+++.||+.+.--.-+.|
T Consensus 62 ~~~~~~~~VLDvGcG~G~--~~~~la~~---g~~~v~gvD~s-~~l~~a~~~~~~~-~~~~~v~~~~~d~~~~~~~~~~f 134 (349)
T 3q7e_A 62 RHLFKDKVVLDVGSGTGI--LCMFAAKA---GARKVIGIECS-SISDYAVKIVKAN-KLDHVVTIIKGKVEEVELPVEKV 134 (349)
T ss_dssp HHHHTTCEEEEESCTTSH--HHHHHHHT---TCSEEEEEECS-THHHHHHHHHHHT-TCTTTEEEEESCTTTCCCSSSCE
T ss_pred cccCCCCEEEEEeccchH--HHHHHHHC---CCCEEEEECcH-HHHHHHHHHHHHc-CCCCcEEEEECcHHHccCCCCce
Confidence 356788999999999998 77777654 24699999999 5999999999998 887 999999998861112489
Q ss_pred cEEEEeC------CCcccHHHHHHh-ccCCCceEEEEeC
Q 027409 115 DFLVVDC------TSKDFARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 115 DfVFIDa------~K~~Y~~~f~~~-~~l~~GgvIV~DN 146 (223)
|+|+.+. .......++..+ +.|+|||+++.+.
T Consensus 135 D~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 173 (349)
T 3q7e_A 135 DIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPDR 173 (349)
T ss_dssp EEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESCE
T ss_pred EEEEEccccccccCchhHHHHHHHHHHhCCCCCEEcccc
Confidence 9999864 234556677665 6789999998554
No 147
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.06 E-value=5.3e-10 Score=102.13 Aligned_cols=113 Identities=11% Similarity=-0.014 Sum_probs=83.5
Q ss_pred CcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce----EEEE
Q 027409 25 KESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV----SEVI 100 (223)
Q Consensus 25 i~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~----I~li 100 (223)
+++.+..+|..+ ......+|||+|||+|+ .++.++.. .++.+|+.+|.++++++.|++|++.. |+. ++++
T Consensus 207 ~d~~~~~ll~~l-~~~~~~~VLDlGcG~G~--~s~~la~~--~p~~~V~gvD~s~~al~~Ar~n~~~n-gl~~~~~v~~~ 280 (375)
T 4dcm_A 207 LDIGARFFMQHL-PENLEGEIVDLGCGNGV--IGLTLLDK--NPQAKVVFVDESPMAVASSRLNVETN-MPEALDRCEFM 280 (375)
T ss_dssp CCHHHHHHHHTC-CCSCCSEEEEETCTTCH--HHHHHHHH--CTTCEEEEEESCHHHHHHHHHHHHHH-CGGGGGGEEEE
T ss_pred ccHHHHHHHHhC-cccCCCeEEEEeCcchH--HHHHHHHH--CCCCEEEEEECcHHHHHHHHHHHHHc-CCCcCceEEEE
Confidence 333333344333 22334799999999998 77777754 34689999999999999999999998 864 8999
Q ss_pred ecchHHHhcCCCCccEEEEeCC--------CcccHHHHHHh-ccCCCceEEEE
Q 027409 101 VRQAEEVMGELKGVDFLVVDCT--------SKDFARVLRFA-RFSNKGAVLAF 144 (223)
Q Consensus 101 ~GdA~evL~~L~~fDfVFIDa~--------K~~Y~~~f~~~-~~l~~GgvIV~ 144 (223)
.+|+.+.++. +.||+||.|.- .....++|+.+ +.|+|||.+++
T Consensus 281 ~~D~~~~~~~-~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 332 (375)
T 4dcm_A 281 INNALSGVEP-FRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYI 332 (375)
T ss_dssp ECSTTTTCCT-TCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEE
T ss_pred echhhccCCC-CCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEE
Confidence 9999885432 47999999732 33445677755 56788888776
No 148
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.05 E-value=8.8e-10 Score=95.26 Aligned_cols=113 Identities=8% Similarity=-0.096 Sum_probs=82.6
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHh------------
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYD------------ 91 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~------------ 91 (223)
...|...+++..+....+..+|||+|||+|+ .+.+||.. +.+||.||.++++++.|++....
T Consensus 51 ~~~~~l~~~~~~~~~~~~~~~vLD~GCG~G~--~~~~La~~----G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~ 124 (252)
T 2gb4_A 51 QGHQLLKKHLDTFLKGQSGLRVFFPLCGKAI--EMKWFADR----GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAG 124 (252)
T ss_dssp TCCHHHHHHHHHHHTTCCSCEEEETTCTTCT--HHHHHHHT----TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTT
T ss_pred CCCHHHHHHHHHhccCCCCCeEEEeCCCCcH--HHHHHHHC----CCeEEEEECCHHHHHHHHHhccccccccccccccc
Confidence 5566666777665544577899999999998 78888742 56999999999999999876531
Q ss_pred ------hcCceEEEEecchHHHhcC-CCCccEEEEeC-----CCcccHHHHHHh-ccCCCceEEE
Q 027409 92 ------VVGWVSEVIVRQAEEVMGE-LKGVDFLVVDC-----TSKDFARVLRFA-RFSNKGAVLA 143 (223)
Q Consensus 92 ------a~G~~I~li~GdA~evL~~-L~~fDfVFIDa-----~K~~Y~~~f~~~-~~l~~GgvIV 143 (223)
. +..|+++.||+.+.-.. .+.||+|+.=+ ..+.-..++..+ +.|+|||.++
T Consensus 125 ~~~~~~~-~~~i~~~~~D~~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~ 188 (252)
T 2gb4_A 125 AKVFKSS-SGSISLYCCSIFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYL 188 (252)
T ss_dssp CEEEEET-TSSEEEEESCTTTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEE
T ss_pred ccccccC-CCceEEEECccccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEE
Confidence 1 22399999999885443 36899998422 122335677654 6789999975
No 149
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.05 E-value=1.2e-09 Score=92.52 Aligned_cols=116 Identities=16% Similarity=0.078 Sum_probs=87.8
Q ss_pred cHHHHHHHHHHHHhc---CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEE
Q 027409 26 ESGVAELLSAMAAGW---NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVI 100 (223)
Q Consensus 26 ~p~~g~fL~~L~~~~---~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li 100 (223)
.+.+.+++..++... ...+|||||||.|. .++.++... +++++.+|+++++++.|+++++.. |+. ++++
T Consensus 43 ~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~--~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~~~~~ 116 (273)
T 3bus_A 43 DDATDRLTDEMIALLDVRSGDRVLDVGCGIGK--PAVRLATAR---DVRVTGISISRPQVNQANARATAA-GLANRVTFS 116 (273)
T ss_dssp HHHHHHHHHHHHHHSCCCTTCEEEEESCTTSH--HHHHHHHHS---CCEEEEEESCHHHHHHHHHHHHHT-TCTTTEEEE
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEeCCCCCH--HHHHHHHhc---CCEEEEEeCCHHHHHHHHHHHHhc-CCCcceEEE
Confidence 444556666666554 56799999999998 677776532 579999999999999999999998 886 9999
Q ss_pred ecchHHHhcCC-CCccEEEEeCCCc---ccHHHHHHh-ccCCCceEEEEeCCC
Q 027409 101 VRQAEEVMGEL-KGVDFLVVDCTSK---DFARVLRFA-RFSNKGAVLAFKNAF 148 (223)
Q Consensus 101 ~GdA~evL~~L-~~fDfVFIDa~K~---~Y~~~f~~~-~~l~~GgvIV~DNvl 148 (223)
.+|+.+ ++-- +.||+|+.-..-. +...+|..+ +.++|||.++.-...
T Consensus 117 ~~d~~~-~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 168 (273)
T 3bus_A 117 YADAMD-LPFEDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFV 168 (273)
T ss_dssp ECCTTS-CCSCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred ECcccc-CCCCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEee
Confidence 999977 3322 4799999765332 346777755 667999988876644
No 150
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.05 E-value=9.6e-10 Score=102.94 Aligned_cols=119 Identities=10% Similarity=0.068 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHH-------HHHHHhhcC--ce-
Q 027409 27 SGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAY-------VKAMYDVVG--WV- 96 (223)
Q Consensus 27 p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~A-------r~~~~~a~G--~~- 96 (223)
|.....+..++......+|||||||+|+ .++.+|... ..+++++||++++.++.| +++++.. | +.
T Consensus 228 p~~v~~ml~~l~l~~g~~VLDLGCGsG~--la~~LA~~~--g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~-Gl~~~n 302 (433)
T 1u2z_A 228 PNFLSDVYQQCQLKKGDTFMDLGSGVGN--CVVQAALEC--GCALSFGCEIMDDASDLTILQYEELKKRCKLY-GMRLNN 302 (433)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEESCTTSH--HHHHHHHHH--CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHT-TBCCCC
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCcCH--HHHHHHHHC--CCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHc-CCCCCc
Confidence 4443333344455677899999999998 777777543 235899999999999999 9999988 8 45
Q ss_pred EEEEecchHHH---hcC-CCCccEEEEeC--CCcccHHHHH-HhccCCCceEEEEeCCCCC
Q 027409 97 SEVIVRQAEEV---MGE-LKGVDFLVVDC--TSKDFARVLR-FARFSNKGAVLAFKNAFQR 150 (223)
Q Consensus 97 I~li~GdA~ev---L~~-L~~fDfVFIDa--~K~~Y~~~f~-~~~~l~~GgvIV~DNvl~~ 150 (223)
|+++.||+... ++. ..+||+||+.. .-.+....|. +.+.|+|||.||+-+.+..
T Consensus 303 V~~i~gD~~~~~~~~~~~~~~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~d~f~p 363 (433)
T 1u2z_A 303 VEFSLKKSFVDNNRVAELIPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLKSLRS 363 (433)
T ss_dssp EEEEESSCSTTCHHHHHHGGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESSCSSC
T ss_pred eEEEEcCccccccccccccCCCCEEEEeCccccccHHHHHHHHHHhCCCCeEEEEeeccCC
Confidence 99999977532 221 25799999862 2244555665 4467899999999876543
No 151
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.05 E-value=1.6e-09 Score=98.12 Aligned_cols=99 Identities=17% Similarity=0.110 Sum_probs=78.1
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEecchHHHhcC-C-CCccEE
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVRQAEEVMGE-L-KGVDFL 117 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~GdA~evL~~-L-~~fDfV 117 (223)
..++||++| |+|. .+++++.. .++++++.+|+++++++.|++|+++. |+. |+++.||+.+.|+. . +.||+|
T Consensus 172 ~~~~VLDlG-G~G~--~~~~la~~--~~~~~v~~vDi~~~~l~~a~~~~~~~-g~~~v~~~~~D~~~~l~~~~~~~fD~V 245 (373)
T 2qm3_A 172 ENKDIFVLG-DDDL--TSIALMLS--GLPKRIAVLDIDERLTKFIEKAANEI-GYEDIEIFTFDLRKPLPDYALHKFDTF 245 (373)
T ss_dssp TTCEEEEES-CTTC--HHHHHHHH--TCCSEEEEECSCHHHHHHHHHHHHHH-TCCCEEEECCCTTSCCCTTTSSCBSEE
T ss_pred CCCEEEEEC-CCCH--HHHHHHHh--CCCCEEEEEECCHHHHHHHHHHHHHc-CCCCEEEEEChhhhhchhhccCCccEE
Confidence 478999999 9998 77777643 33579999999999999999999999 986 99999999986764 4 479999
Q ss_pred EEeCCC--cccHHHHHHh-ccCCCce-EEEEe
Q 027409 118 VVDCTS--KDFARVLRFA-RFSNKGA-VLAFK 145 (223)
Q Consensus 118 FIDa~K--~~Y~~~f~~~-~~l~~Gg-vIV~D 145 (223)
|+|.-- .....+++.+ +.++||| +++..
T Consensus 246 i~~~p~~~~~~~~~l~~~~~~LkpgG~~~~~~ 277 (373)
T 2qm3_A 246 ITDPPETLEAIRAFVGRGIATLKGPRCAGYFG 277 (373)
T ss_dssp EECCCSSHHHHHHHHHHHHHTBCSTTCEEEEE
T ss_pred EECCCCchHHHHHHHHHHHHHcccCCeEEEEE
Confidence 999521 1245667644 6789999 54444
No 152
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.05 E-value=6.5e-10 Score=102.81 Aligned_cols=100 Identities=12% Similarity=0.124 Sum_probs=83.1
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCC-cEEEEEeCCchHHHHHHHHHHhhcCce---EEEEecchHHHhc-CC-CCc
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTC-ARHVCIVPDERSRLAYVKAMYDVVGWV---SEVIVRQAEEVMG-EL-KGV 114 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~-g~i~TIE~d~e~~~~Ar~~~~~a~G~~---I~li~GdA~evL~-~L-~~f 114 (223)
...+||+++||+|. .+|.+|... .+ ++|+.+|+|++.++.+++|++.. |++ ++++.|||.+.+. .+ ..|
T Consensus 52 ~g~~VLDlfaGtG~--~sl~aa~~~--~ga~~V~avDi~~~av~~~~~N~~~N-gl~~~~v~v~~~Da~~~l~~~~~~~f 126 (392)
T 3axs_A 52 RPVKVADPLSASGI--RAIRFLLET--SCVEKAYANDISSKAIEIMKENFKLN-NIPEDRYEIHGMEANFFLRKEWGFGF 126 (392)
T ss_dssp SCEEEEESSCTTSH--HHHHHHHHC--SCEEEEEEECSCHHHHHHHHHHHHHT-TCCGGGEEEECSCHHHHHHSCCSSCE
T ss_pred CCCEEEECCCcccH--HHHHHHHhC--CCCCEEEEEECCHHHHHHHHHHHHHh-CCCCceEEEEeCCHHHHHHHhhCCCC
Confidence 34799999999998 788776532 23 68999999999999999999998 885 9999999999998 77 479
Q ss_pred cEEEEeCCCcccHHHHHH-hccCCCceEEEEeC
Q 027409 115 DFLVVDCTSKDFARVLRF-ARFSNKGAVLAFKN 146 (223)
Q Consensus 115 DfVFIDa~K~~Y~~~f~~-~~~l~~GgvIV~DN 146 (223)
|+||+|. .....++++. ++.+++||+|++--
T Consensus 127 D~V~lDP-~g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 127 DYVDLDP-FGTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp EEEEECC-SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred cEEEECC-CcCHHHHHHHHHHHhCCCCEEEEEe
Confidence 9999999 5555678874 46679999987743
No 153
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.05 E-value=4e-10 Score=97.67 Aligned_cols=99 Identities=9% Similarity=-0.008 Sum_probs=77.2
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCc----eEEEEecchHHHhcCCCCccE
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGW----VSEVIVRQAEEVMGELKGVDF 116 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~----~I~li~GdA~evL~~L~~fDf 116 (223)
++.+|||||||+|+ .+++|+.. +.+++.+|+++++++.|++++... ++ .|+++.+|+.+. +.-+.||+
T Consensus 82 ~~~~vLDlGcG~G~--~~~~l~~~----~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~~~v~~~~~d~~~~-~~~~~fD~ 153 (299)
T 3g2m_A 82 VSGPVLELAAGMGR--LTFPFLDL----GWEVTALELSTSVLAAFRKRLAEA-PADVRDRCTLVQGDMSAF-ALDKRFGT 153 (299)
T ss_dssp CCSCEEEETCTTTT--THHHHHTT----TCCEEEEESCHHHHHHHHHHHHTS-CHHHHTTEEEEECBTTBC-CCSCCEEE
T ss_pred CCCcEEEEeccCCH--HHHHHHHc----CCeEEEEECCHHHHHHHHHHHhhc-ccccccceEEEeCchhcC-CcCCCcCE
Confidence 45699999999998 67677632 578999999999999999999998 74 399999999873 32358999
Q ss_pred EEEeCC------CcccHHHHHHh-ccCCCceEEEEeCC
Q 027409 117 LVVDCT------SKDFARVLRFA-RFSNKGAVLAFKNA 147 (223)
Q Consensus 117 VFIDa~------K~~Y~~~f~~~-~~l~~GgvIV~DNv 147 (223)
|++... .++...+|+.+ +.|+|||.+++...
T Consensus 154 v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 191 (299)
T 3g2m_A 154 VVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLA 191 (299)
T ss_dssp EEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEee
Confidence 997532 22346677654 67799999998754
No 154
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.04 E-value=1.1e-09 Score=97.67 Aligned_cols=107 Identities=11% Similarity=0.060 Sum_probs=80.2
Q ss_pred HHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHh
Q 027409 31 ELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVM 108 (223)
Q Consensus 31 ~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL 108 (223)
+.|.......+.++|||||||+|+ .++.+|.+ ...+++.+|.+ ++++.|++++++. |+. |+++.||+.+.-
T Consensus 28 ~ai~~~~~~~~~~~VLDiGcGtG~--ls~~la~~---g~~~v~~vD~s-~~~~~a~~~~~~~-~~~~~i~~~~~d~~~~~ 100 (328)
T 1g6q_1 28 NAIIQNKDLFKDKIVLDVGCGTGI--LSMFAAKH---GAKHVIGVDMS-SIIEMAKELVELN-GFSDKITLLRGKLEDVH 100 (328)
T ss_dssp HHHHHHHHHHTTCEEEEETCTTSH--HHHHHHHT---CCSEEEEEESS-THHHHHHHHHHHT-TCTTTEEEEESCTTTSC
T ss_pred HHHHhhHhhcCCCEEEEecCccHH--HHHHHHHC---CCCEEEEEChH-HHHHHHHHHHHHc-CCCCCEEEEECchhhcc
Confidence 334444556788999999999998 67676643 23599999999 6999999999998 886 999999998742
Q ss_pred cCCCCccEEEEeC------CCcccHHHHHHh-ccCCCceEEEE
Q 027409 109 GELKGVDFLVVDC------TSKDFARVLRFA-RFSNKGAVLAF 144 (223)
Q Consensus 109 ~~L~~fDfVFIDa------~K~~Y~~~f~~~-~~l~~GgvIV~ 144 (223)
...++||+|+.+. .......++..+ +.|+|||+++.
T Consensus 101 ~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 101 LPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp CSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred CCCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 1124799999873 122345566654 67799999984
No 155
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.04 E-value=1.7e-10 Score=96.36 Aligned_cols=106 Identities=9% Similarity=-0.037 Sum_probs=79.6
Q ss_pred CCcHHHHHHHHHHHH--hcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEe
Q 027409 24 IKESGVAELLSAMAA--GWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIV 101 (223)
Q Consensus 24 ii~p~~g~fL~~L~~--~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~ 101 (223)
+..|+...++..++. .....+|||||||+|+ .++.++.. +++++.+|+++++++.|+++.. .++++.
T Consensus 29 ~~~~~~~~l~~~~~~~~~~~~~~vLDiGcG~G~--~~~~l~~~----~~~v~~vD~s~~~~~~a~~~~~-----~~~~~~ 97 (226)
T 3m33_A 29 LSGPDPELTFDLWLSRLLTPQTRVLEAGCGHGP--DAARFGPQ----AARWAAYDFSPELLKLARANAP-----HADVYE 97 (226)
T ss_dssp ESSSCTTHHHHHHHHHHCCTTCEEEEESCTTSH--HHHHHGGG----SSEEEEEESCHHHHHHHHHHCT-----TSEEEE
T ss_pred cCCCCHHHHHHHHHHhcCCCCCeEEEeCCCCCH--HHHHHHHc----CCEEEEEECCHHHHHHHHHhCC-----CceEEE
Confidence 344555555555554 3567899999999998 77677543 5799999999999999999821 279999
Q ss_pred cchHHHhcCC--CCccEEEEeCCCcccHHHHHHh-ccCCCceEEE
Q 027409 102 RQAEEVMGEL--KGVDFLVVDCTSKDFARVLRFA-RFSNKGAVLA 143 (223)
Q Consensus 102 GdA~evL~~L--~~fDfVFIDa~K~~Y~~~f~~~-~~l~~GgvIV 143 (223)
+|+.+.++-- +.||+|+... +...++..+ +.|+|||.++
T Consensus 98 ~d~~~~~~~~~~~~fD~v~~~~---~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 98 WNGKGELPAGLGAPFGLIVSRR---GPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp CCSCSSCCTTCCCCEEEEEEES---CCSGGGGGHHHHEEEEEEEE
T ss_pred cchhhccCCcCCCCEEEEEeCC---CHHHHHHHHHHHcCCCcEEE
Confidence 9998767632 4799999984 445556544 6679999999
No 156
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.04 E-value=8.4e-10 Score=93.44 Aligned_cols=110 Identities=9% Similarity=-0.044 Sum_probs=80.3
Q ss_pred cHHHHHHHHHHHHhc-CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecch
Q 027409 26 ESGVAELLSAMAAGW-NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQA 104 (223)
Q Consensus 26 ~p~~g~fL~~L~~~~-~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA 104 (223)
......++..+.... ++.+|||||||+|. .+..|+. .+.+++.+|+++++++.|++++.+ ++++.||+
T Consensus 34 ~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~--~~~~l~~----~~~~v~gvD~s~~~~~~a~~~~~~-----~~~~~~d~ 102 (263)
T 3pfg_A 34 HREAADLAALVRRHSPKAASLLDVACGTGM--HLRHLAD----SFGTVEGLELSADMLAIARRRNPD-----AVLHHGDM 102 (263)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEEEETCTTSH--HHHHHTT----TSSEEEEEESCHHHHHHHHHHCTT-----SEEEECCT
T ss_pred HHHHHHHHHHHHhhCCCCCcEEEeCCcCCH--HHHHHHH----cCCeEEEEECCHHHHHHHHhhCCC-----CEEEECCh
Confidence 344455555555554 45899999999997 6666642 256899999999999999987652 68999999
Q ss_pred HHHhcCCCCccEEEEeCCC-------cccHHHHHHh-ccCCCceEEEEeCC
Q 027409 105 EEVMGELKGVDFLVVDCTS-------KDFARVLRFA-RFSNKGAVLAFKNA 147 (223)
Q Consensus 105 ~evL~~L~~fDfVFIDa~K-------~~Y~~~f~~~-~~l~~GgvIV~DNv 147 (223)
.+. +.-+.||+|+...+- ++...++..+ +.|+|||.++++..
T Consensus 103 ~~~-~~~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 152 (263)
T 3pfg_A 103 RDF-SLGRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEPW 152 (263)
T ss_dssp TTC-CCSCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred HHC-CccCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 873 223589999998632 2344566644 67799999999853
No 157
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.04 E-value=6.7e-10 Score=99.65 Aligned_cols=102 Identities=16% Similarity=0.110 Sum_probs=77.2
Q ss_pred HHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCCCCc
Q 027409 37 AAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGELKGV 114 (223)
Q Consensus 37 ~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L~~f 114 (223)
+...+.++|||||||+|. .++.+|.+ ..++++.+|.++ +++.|++++++. |+. |+++.||+.+.-..-++|
T Consensus 60 ~~~~~~~~VLDiGcGtG~--ls~~la~~---g~~~v~gvD~s~-~~~~a~~~~~~~-~~~~~i~~~~~d~~~~~~~~~~~ 132 (340)
T 2fyt_A 60 PHIFKDKVVLDVGCGTGI--LSMFAAKA---GAKKVLGVDQSE-ILYQAMDIIRLN-KLEDTITLIKGKIEEVHLPVEKV 132 (340)
T ss_dssp GGGTTTCEEEEETCTTSH--HHHHHHHT---TCSEEEEEESST-HHHHHHHHHHHT-TCTTTEEEEESCTTTSCCSCSCE
T ss_pred hhhcCCCEEEEeeccCcH--HHHHHHHc---CCCEEEEEChHH-HHHHHHHHHHHc-CCCCcEEEEEeeHHHhcCCCCcE
Confidence 335678899999999998 77777653 235999999996 999999999998 884 999999998741111479
Q ss_pred cEEEEeCC------CcccHHHHHHh-ccCCCceEEEEe
Q 027409 115 DFLVVDCT------SKDFARVLRFA-RFSNKGAVLAFK 145 (223)
Q Consensus 115 DfVFIDa~------K~~Y~~~f~~~-~~l~~GgvIV~D 145 (223)
|+|+.+.- ......++..+ +.|+|||+++.+
T Consensus 133 D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 170 (340)
T 2fyt_A 133 DVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVYPD 170 (340)
T ss_dssp EEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEESC
T ss_pred EEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEEcc
Confidence 99998751 12334566654 677999999843
No 158
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.03 E-value=1.2e-09 Score=95.26 Aligned_cols=109 Identities=12% Similarity=-0.013 Sum_probs=81.9
Q ss_pred HHHHHHhcCC-CeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhc
Q 027409 33 LSAMAAGWNA-KLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMG 109 (223)
Q Consensus 33 L~~L~~~~~a-k~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~ 109 (223)
|..++...++ .+||+|||+.|| .+++||.. .+.++++.+|+|+..++.|++|+++. |+. |+++.||+++.+.
T Consensus 12 L~~i~~~v~~g~~VlDIGtGsG~--l~i~la~~--~~~~~V~avDi~~~al~~A~~N~~~~-gl~~~I~v~~gD~l~~~~ 86 (244)
T 3gnl_A 12 LEKVASYITKNERIADIGSDHAY--LPCFAVKN--QTASFAIAGEVVDGPFQSAQKQVRSS-GLTEQIDVRKGNGLAVIE 86 (244)
T ss_dssp HHHHHTTCCSSEEEEEETCSTTH--HHHHHHHT--TSEEEEEEEESSHHHHHHHHHHHHHT-TCTTTEEEEECSGGGGCC
T ss_pred HHHHHHhCCCCCEEEEECCccHH--HHHHHHHh--CCCCEEEEEECCHHHHHHHHHHHHHc-CCCceEEEEecchhhccC
Confidence 5666666655 589999999999 77777643 34578999999999999999999999 997 9999999999876
Q ss_pred CCCCccEEEEeC-CCcccHHHHHHh-ccCCCceEE-EEeC
Q 027409 110 ELKGVDFLVVDC-TSKDFARVLRFA-RFSNKGAVL-AFKN 146 (223)
Q Consensus 110 ~L~~fDfVFIDa-~K~~Y~~~f~~~-~~l~~GgvI-V~DN 146 (223)
.-++||.|++-. .++.-.++++.. ..+++++.+ +.-|
T Consensus 87 ~~~~~D~IviagmGg~lI~~IL~~~~~~L~~~~~lIlq~~ 126 (244)
T 3gnl_A 87 KKDAIDTIVIAGMGGTLIRTILEEGAAKLAGVTKLILQPN 126 (244)
T ss_dssp GGGCCCEEEEEEECHHHHHHHHHHTGGGGTTCCEEEEEES
T ss_pred ccccccEEEEeCCchHHHHHHHHHHHHHhCCCCEEEEEcC
Confidence 423599999843 233456666654 445555544 4444
No 159
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.03 E-value=1.3e-09 Score=98.91 Aligned_cols=117 Identities=13% Similarity=0.174 Sum_probs=90.1
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEe
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIV 101 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~ 101 (223)
.+.+...+.|..++ ..+..+|||+|||+|. .++.+|.. ...++|+.+|+|+++++.|++|++.+ |+. |+++.
T Consensus 201 ~l~~~la~~l~~~~-~~~~~~vLD~gCGsG~--~~i~~a~~--~~~~~v~g~Dis~~~l~~A~~n~~~~-gl~~~i~~~~ 274 (373)
T 3tm4_A 201 HLKASIANAMIELA-ELDGGSVLDPMCGSGT--ILIELALR--RYSGEIIGIEKYRKHLIGAEMNALAA-GVLDKIKFIQ 274 (373)
T ss_dssp CCCHHHHHHHHHHH-TCCSCCEEETTCTTCH--HHHHHHHT--TCCSCEEEEESCHHHHHHHHHHHHHT-TCGGGCEEEE
T ss_pred CccHHHHHHHHHhh-cCCCCEEEEccCcCcH--HHHHHHHh--CCCCeEEEEeCCHHHHHHHHHHHHHc-CCCCceEEEE
Confidence 56777888777777 7778899999999997 67666643 33569999999999999999999999 994 99999
Q ss_pred cchHHHhcCCCCccEEEEeCC-----------CcccHHHHHHh-ccCCCceEEEEeC
Q 027409 102 RQAEEVMGELKGVDFLVVDCT-----------SKDFARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 102 GdA~evL~~L~~fDfVFIDa~-----------K~~Y~~~f~~~-~~l~~GgvIV~DN 146 (223)
||+.+.-...+.||+|+.|.- ...|.++++.+ +.+..++++++.|
T Consensus 275 ~D~~~~~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l~g~~~~i~~~ 331 (373)
T 3tm4_A 275 GDATQLSQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVLEKRGVFITTE 331 (373)
T ss_dssp CCGGGGGGTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHEEEEEEEEESC
T ss_pred CChhhCCcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHcCCeEEEEECC
Confidence 999986443468999999842 23367777755 4455555556554
No 160
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.03 E-value=8.9e-10 Score=90.36 Aligned_cols=108 Identities=13% Similarity=0.111 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHH
Q 027409 28 GVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEV 107 (223)
Q Consensus 28 ~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~ev 107 (223)
...++|..+. ..+..+|||||||.|. .+..++.. +.+++.+|+++++++.|++++..- ++++.+|+.+.
T Consensus 33 ~~~~~l~~~~-~~~~~~vLDiGcG~G~--~~~~l~~~----~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~d~~~~ 101 (220)
T 3hnr_A 33 HYEDILEDVV-NKSFGNVLEFGVGTGN--LTNKLLLA----GRTVYGIEPSREMRMIAKEKLPKE----FSITEGDFLSF 101 (220)
T ss_dssp THHHHHHHHH-HTCCSEEEEECCTTSH--HHHHHHHT----TCEEEEECSCHHHHHHHHHHSCTT----CCEESCCSSSC
T ss_pred HHHHHHHHhh-ccCCCeEEEeCCCCCH--HHHHHHhC----CCeEEEEeCCHHHHHHHHHhCCCc----eEEEeCChhhc
Confidence 3455666554 3478899999999998 66677642 679999999999999999887622 68999999875
Q ss_pred hcCCCCccEEEEeCCCcccHH-----HHHHh-ccCCCceEEEEeCC
Q 027409 108 MGELKGVDFLVVDCTSKDFAR-----VLRFA-RFSNKGAVLAFKNA 147 (223)
Q Consensus 108 L~~L~~fDfVFIDa~K~~Y~~-----~f~~~-~~l~~GgvIV~DNv 147 (223)
-.. +.||+|+....-....+ ++..+ +.++|||.++....
T Consensus 102 ~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 146 (220)
T 3hnr_A 102 EVP-TSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADT 146 (220)
T ss_dssp CCC-SCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CCC-CCeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 333 78999999865444432 66544 67799998887653
No 161
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.02 E-value=8.1e-10 Score=101.93 Aligned_cols=118 Identities=14% Similarity=0.091 Sum_probs=92.1
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecc
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQ 103 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~Gd 103 (223)
.++.+..+++..++......+|||+|||.|. .|+.+|.. .+ +|+|+.+|+++++++.+++++++. |+.++++.+|
T Consensus 229 ~~qd~~s~~~~~~l~~~~g~~VLDlgaG~G~--~t~~la~~-~~-~~~v~a~D~~~~~l~~~~~~~~~~-g~~~~~~~~D 303 (429)
T 1sqg_A 229 TVQDASAQGCMTWLAPQNGEHILDLCAAPGG--KTTHILEV-AP-EAQVVAVDIDEQRLSRVYDNLKRL-GMKATVKQGD 303 (429)
T ss_dssp EECCHHHHTHHHHHCCCTTCEEEEESCTTCH--HHHHHHHH-CT-TCEEEEEESSTTTHHHHHHHHHHT-TCCCEEEECC
T ss_pred EeeCHHHHHHHHHcCCCCcCeEEEECCCchH--HHHHHHHH-cC-CCEEEEECCCHHHHHHHHHHHHHc-CCCeEEEeCc
Confidence 3566677777777777777899999999997 77777754 33 489999999999999999999999 9889999999
Q ss_pred hHHHhcCC--CCccEEEEeCCCcc-------------------------cHHHHHHh-ccCCCceEEEEeC
Q 027409 104 AEEVMGEL--KGVDFLVVDCTSKD-------------------------FARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 104 A~evL~~L--~~fDfVFIDa~K~~-------------------------Y~~~f~~~-~~l~~GgvIV~DN 146 (223)
+.+..+.+ +.||.|++|+--.. +.++++.+ +.++|||.+|.-.
T Consensus 304 ~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvyst 374 (429)
T 1sqg_A 304 GRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYAT 374 (429)
T ss_dssp TTCTHHHHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred hhhchhhcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 98754322 37999999973211 24566644 6679999988755
No 162
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.01 E-value=2.2e-09 Score=91.56 Aligned_cols=101 Identities=9% Similarity=-0.084 Sum_probs=78.0
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhc-CCCCccE
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMG-ELKGVDF 116 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~-~L~~fDf 116 (223)
.+..+|||||||+|. .++.++.. ..++++.+|+++++++.|++++... |.. ++++.+|+.+.-- .-+.||+
T Consensus 63 ~~~~~vLDiGcG~G~--~~~~l~~~---~~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~v~~~~~d~~~~~~~~~~~fD~ 136 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGG--DLLKYERA---GIGEYYGVDIAEVSINDARVRARNM-KRRFKVFFRAQDSYGRHMDLGKEFDV 136 (298)
T ss_dssp CTTCEEEEETCTTTT--THHHHHHH---TCSEEEEEESCHHHHHHHHHHHHTS-CCSSEEEEEESCTTTSCCCCSSCEEE
T ss_pred CCCCeEEEECCCCCH--HHHHHHHC---CCCEEEEEECCHHHHHHHHHHHHhc-CCCccEEEEECCccccccCCCCCcCE
Confidence 577899999999997 55566543 2459999999999999999999998 874 9999999987421 1247999
Q ss_pred EEEeCCC-------cccHHHHHHh-ccCCCceEEEEeC
Q 027409 117 LVVDCTS-------KDFARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 117 VFIDa~K-------~~Y~~~f~~~-~~l~~GgvIV~DN 146 (223)
|+....- .+...++..+ +.|+|||.++..-
T Consensus 137 v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 137 ISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTV 174 (298)
T ss_dssp EEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 9998643 3345666644 6779999988653
No 163
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.01 E-value=1.7e-09 Score=90.61 Aligned_cols=99 Identities=11% Similarity=0.023 Sum_probs=71.5
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHH---hcCCCCccEE
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEV---MGELKGVDFL 117 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~ev---L~~L~~fDfV 117 (223)
...+|||||||+|+ .+..+|... + +|+|+.+|+++++++.+++.-++. ..++++.+|+.+. .+-.+.||+|
T Consensus 57 ~g~~VLDlGcGtG~--~~~~la~~~-~-~~~V~gvD~s~~~l~~~~~~a~~~--~~v~~~~~d~~~~~~~~~~~~~fD~V 130 (210)
T 1nt2_A 57 GDERVLYLGAASGT--TVSHLADIV-D-EGIIYAVEYSAKPFEKLLELVRER--NNIIPLLFDASKPWKYSGIVEKVDLI 130 (210)
T ss_dssp SSCEEEEETCTTSH--HHHHHHHHT-T-TSEEEEECCCHHHHHHHHHHHHHC--SSEEEECSCTTCGGGTTTTCCCEEEE
T ss_pred CCCEEEEECCcCCH--HHHHHHHHc-C-CCEEEEEECCHHHHHHHHHHHhcC--CCeEEEEcCCCCchhhcccccceeEE
Confidence 45699999999998 777777543 3 689999999999877666544332 1388899999764 2212589999
Q ss_pred EEeCCCc-ccHHHHHH-hccCCCceEEEEe
Q 027409 118 VVDCTSK-DFARVLRF-ARFSNKGAVLAFK 145 (223)
Q Consensus 118 FIDa~K~-~Y~~~f~~-~~~l~~GgvIV~D 145 (223)
|.|.... +...++.. .+.|+|||.+++.
T Consensus 131 ~~~~~~~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 131 YQDIAQKNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp EECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEeccChhHHHHHHHHHHHHhCCCCEEEEE
Confidence 9996533 23334654 4678999999887
No 164
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.01 E-value=3.8e-09 Score=86.05 Aligned_cols=109 Identities=12% Similarity=0.045 Sum_probs=79.3
Q ss_pred CCcHHHHHHHHHHHHh---cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEE
Q 027409 24 IKESGVAELLSAMAAG---WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVI 100 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~---~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li 100 (223)
...+...+.|..++.. ...++|||+|||+|+ .+++++.. ..++++.+|+++++++.|++++. . ++++
T Consensus 31 ~~~~~~~~~l~~~~~~~~~~~~~~vlD~gcG~G~--~~~~l~~~---~~~~v~~vD~~~~~~~~a~~~~~-~----~~~~ 100 (200)
T 1ne2_A 31 PTDASTAAYFLIEIYNDGNIGGRSVIDAGTGNGI--LACGSYLL---GAESVTAFDIDPDAIETAKRNCG-G----VNFM 100 (200)
T ss_dssp CCCHHHHHHHHHHHHHHTSSBTSEEEEETCTTCH--HHHHHHHT---TBSEEEEEESCHHHHHHHHHHCT-T----SEEE
T ss_pred CCCHHHHHHHHHHHHhcCCCCCCEEEEEeCCccH--HHHHHHHc---CCCEEEEEECCHHHHHHHHHhcC-C----CEEE
Confidence 4556666666665553 367899999999998 67777643 23589999999999999999887 3 6999
Q ss_pred ecchHHHhcCCCCccEEEEeCC-----CcccHHHHHHh-ccCCCceEEEEeCC
Q 027409 101 VRQAEEVMGELKGVDFLVVDCT-----SKDFARVLRFA-RFSNKGAVLAFKNA 147 (223)
Q Consensus 101 ~GdA~evL~~L~~fDfVFIDa~-----K~~Y~~~f~~~-~~l~~GgvIV~DNv 147 (223)
.||+.+ ++ +.||+|+.|.- +.....+++.+ +.+ |+++++.|.
T Consensus 101 ~~d~~~-~~--~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~--g~~~~~~~~ 148 (200)
T 1ne2_A 101 VADVSE-IS--GKYDTWIMNPPFGSVVKHSDRAFIDKAFETS--MWIYSIGNA 148 (200)
T ss_dssp ECCGGG-CC--CCEEEEEECCCC-------CHHHHHHHHHHE--EEEEEEEEG
T ss_pred ECcHHH-CC--CCeeEEEECCCchhccCchhHHHHHHHHHhc--CcEEEEEcC
Confidence 999988 44 58999999964 33445677643 555 777776653
No 165
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.00 E-value=8.8e-10 Score=90.87 Aligned_cols=108 Identities=14% Similarity=0.081 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHH
Q 027409 28 GVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEV 107 (223)
Q Consensus 28 ~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~ev 107 (223)
....++..+....++.+|||||||+|. .+..++. .+.+++.+|+++++++.|++.+.. .++++.+|+.+.
T Consensus 29 ~~~~~~~~l~~~~~~~~vLDiGcG~G~--~~~~l~~----~~~~v~gvD~s~~~~~~a~~~~~~----~v~~~~~d~~~~ 98 (250)
T 2p7i_A 29 MHPFMVRAFTPFFRPGNLLELGSFKGD--FTSRLQE----HFNDITCVEASEEAISHAQGRLKD----GITYIHSRFEDA 98 (250)
T ss_dssp HHHHHHHHHGGGCCSSCEEEESCTTSH--HHHHHTT----TCSCEEEEESCHHHHHHHHHHSCS----CEEEEESCGGGC
T ss_pred HHHHHHHHHHhhcCCCcEEEECCCCCH--HHHHHHH----hCCcEEEEeCCHHHHHHHHHhhhC----CeEEEEccHHHc
Confidence 445566666667788999999999998 6666643 245899999999999999988654 389999999886
Q ss_pred hcCCCCccEEEEeCCCc---ccHHHHHH-h-ccCCCceEEEEeC
Q 027409 108 MGELKGVDFLVVDCTSK---DFARVLRF-A-RFSNKGAVLAFKN 146 (223)
Q Consensus 108 L~~L~~fDfVFIDa~K~---~Y~~~f~~-~-~~l~~GgvIV~DN 146 (223)
.+ -+.||+|+.-..-+ +...++.. . +.|+|||.++...
T Consensus 99 ~~-~~~fD~v~~~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~ 141 (250)
T 2p7i_A 99 QL-PRRYDNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLVC 141 (250)
T ss_dssp CC-SSCEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred Cc-CCcccEEEEhhHHHhhcCHHHHHHHHHHHhcCCCCEEEEEc
Confidence 32 24799999876433 33567764 4 5679999887754
No 166
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.00 E-value=4e-09 Score=95.51 Aligned_cols=113 Identities=14% Similarity=0.067 Sum_probs=82.1
Q ss_pred CCcHHH-HHHHHHHHHhcC--CCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEE
Q 027409 24 IKESGV-AELLSAMAAGWN--AKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEV 99 (223)
Q Consensus 24 ii~p~~-g~fL~~L~~~~~--ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~l 99 (223)
++.+.+ ..++..++.... .++|||+|||+|. .+++||.. .++|+.+|.+++.++.|++|.+.. |+. +++
T Consensus 193 Q~n~~~~~~l~~~~~~~~~~~~~~vLDl~cG~G~--~~l~la~~----~~~V~gvd~~~~ai~~a~~n~~~n-g~~~v~~ 265 (369)
T 3bt7_A 193 QPNAAMNIQMLEWALDVTKGSKGDLLELYCGNGN--FSLALARN----FDRVLATEIAKPSVAAAQYNIAAN-HIDNVQI 265 (369)
T ss_dssp CSBHHHHHHHHHHHHHHTTTCCSEEEEESCTTSH--HHHHHGGG----SSEEEEECCCHHHHHHHHHHHHHT-TCCSEEE
T ss_pred cCCHHHHHHHHHHHHHHhhcCCCEEEEccCCCCH--HHHHHHhc----CCEEEEEECCHHHHHHHHHHHHHc-CCCceEE
Confidence 344444 344444444432 4789999999998 77777642 368999999999999999999998 987 999
Q ss_pred EecchHHHhcCC----------------CCccEEEEeCCCcc-cHHHHHHhccCCCceEEEEe
Q 027409 100 IVRQAEEVMGEL----------------KGVDFLVVDCTSKD-FARVLRFARFSNKGAVLAFK 145 (223)
Q Consensus 100 i~GdA~evL~~L----------------~~fDfVFIDa~K~~-Y~~~f~~~~~l~~GgvIV~D 145 (223)
+.|||.+.++.+ ..||+||+|.-... ..+.++.+. ++|.+|.+.
T Consensus 266 ~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~g~~~~~~~~l~--~~g~ivyvs 326 (369)
T 3bt7_A 266 IRMAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDPPRSGLDSETEKMVQ--AYPRILYIS 326 (369)
T ss_dssp ECCCSHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEECCCTTCCCHHHHHHHT--TSSEEEEEE
T ss_pred EECCHHHHHHHHhhccccccccccccccCCCCEEEECcCccccHHHHHHHHh--CCCEEEEEE
Confidence 999999987542 16999999986543 344555544 455555543
No 167
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.00 E-value=1.5e-09 Score=97.20 Aligned_cols=104 Identities=15% Similarity=0.100 Sum_probs=80.6
Q ss_pred HHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHH
Q 027409 30 AELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEV 107 (223)
Q Consensus 30 g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~ev 107 (223)
.+-+.++....+.++||++|||+|+ .++. |. ..++++.+|.|++.++.|++|++.. |+. ++++.||+.+.
T Consensus 184 ~er~~i~~~~~~~~~VLDlg~G~G~--~~l~-a~----~~~~V~~vD~s~~ai~~a~~n~~~n-~l~~~v~~~~~D~~~~ 255 (336)
T 2yx1_A 184 GERARIMKKVSLNDVVVDMFAGVGP--FSIA-CK----NAKKIYAIDINPHAIELLKKNIKLN-KLEHKIIPILSDVREV 255 (336)
T ss_dssp HHHHHHHHHCCTTCEEEETTCTTSH--HHHH-TT----TSSEEEEEESCHHHHHHHHHHHHHT-TCTTTEEEEESCGGGC
T ss_pred HHHHHHHHhcCCCCEEEEccCccCH--HHHh-cc----CCCEEEEEECCHHHHHHHHHHHHHc-CCCCcEEEEECChHHh
Confidence 3334333334577899999999997 6666 53 2679999999999999999999998 984 99999999997
Q ss_pred hcCCCCccEEEEeCCCcccHHHHHHh-ccCCCceEEEEe
Q 027409 108 MGELKGVDFLVVDCTSKDFARVLRFA-RFSNKGAVLAFK 145 (223)
Q Consensus 108 L~~L~~fDfVFIDa~K~~Y~~~f~~~-~~l~~GgvIV~D 145 (223)
+ ..||+||+|.- ....++++.+ +.+++||++++-
T Consensus 256 ~---~~fD~Vi~dpP-~~~~~~l~~~~~~L~~gG~l~~~ 290 (336)
T 2yx1_A 256 D---VKGNRVIMNLP-KFAHKFIDKALDIVEEGGVIHYY 290 (336)
T ss_dssp C---CCEEEEEECCT-TTGGGGHHHHHHHEEEEEEEEEE
T ss_pred c---CCCcEEEECCc-HhHHHHHHHHHHHcCCCCEEEEE
Confidence 7 68999999953 2234677644 667889976663
No 168
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.99 E-value=1e-09 Score=91.90 Aligned_cols=95 Identities=9% Similarity=-0.018 Sum_probs=74.3
Q ss_pred HhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCcc
Q 027409 38 AGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVD 115 (223)
Q Consensus 38 ~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fD 115 (223)
...+.++|||||||+|+ .+.+++.. +.+++.+|+++++++.|+++ ++++.+|+.+.+..+ +.||
T Consensus 38 ~~~~~~~vLDiGcG~G~--~~~~l~~~----~~~v~gvD~s~~~~~~a~~~--------~~~~~~d~~~~~~~~~~~~fD 103 (240)
T 3dli_A 38 YFKGCRRVLDIGCGRGE--FLELCKEE----GIESIGVDINEDMIKFCEGK--------FNVVKSDAIEYLKSLPDKYLD 103 (240)
T ss_dssp GTTTCSCEEEETCTTTH--HHHHHHHH----TCCEEEECSCHHHHHHHHTT--------SEEECSCHHHHHHTSCTTCBS
T ss_pred hhcCCCeEEEEeCCCCH--HHHHHHhC----CCcEEEEECCHHHHHHHHhh--------cceeeccHHHHhhhcCCCCee
Confidence 34566999999999998 66677643 56899999999999988876 488999999987554 4799
Q ss_pred EEEEeCCCc-----ccHHHHHHh-ccCCCceEEEEeC
Q 027409 116 FLVVDCTSK-----DFARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 116 fVFIDa~K~-----~Y~~~f~~~-~~l~~GgvIV~DN 146 (223)
+|+.-..-+ ++..++..+ +.|+|||.+++..
T Consensus 104 ~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (240)
T 3dli_A 104 GVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIES 140 (240)
T ss_dssp EEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEE
T ss_pred EEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 999875432 556788755 6789999988754
No 169
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.99 E-value=3.5e-09 Score=91.71 Aligned_cols=115 Identities=11% Similarity=0.093 Sum_probs=82.6
Q ss_pred cHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhc-Cce-EEEEecc
Q 027409 26 ESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVV-GWV-SEVIVRQ 103 (223)
Q Consensus 26 ~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~-G~~-I~li~Gd 103 (223)
.++..++|..+.. .+.++|||||||+|. .++.|+... +++.+++.+|+++++++.|+++++... +.. ++++.+|
T Consensus 22 ~~~~~~~l~~~~~-~~~~~vLDiGcG~G~--~~~~la~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d 97 (299)
T 3g5t_A 22 PSDFYKMIDEYHD-GERKLLVDVGCGPGT--ATLQMAQEL-KPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISS 97 (299)
T ss_dssp CHHHHHHHHHHCC-SCCSEEEEETCTTTH--HHHHHHHHS-SCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECC
T ss_pred CHHHHHHHHHHhc-CCCCEEEEECCCCCH--HHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcC
Confidence 3444444433322 478899999999998 777776432 347899999999999999999998741 233 9999999
Q ss_pred hHHHh-cC---C--CCccEEEEeCCCc--ccHHHHHHh-ccCCCceEEEE
Q 027409 104 AEEVM-GE---L--KGVDFLVVDCTSK--DFARVLRFA-RFSNKGAVLAF 144 (223)
Q Consensus 104 A~evL-~~---L--~~fDfVFIDa~K~--~Y~~~f~~~-~~l~~GgvIV~ 144 (223)
+.+.- +. + +.||+|+....-. +...+++.+ +.|+|||.++.
T Consensus 98 ~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 98 SDDFKFLGADSVDKQKIDMITAVECAHWFDFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp TTCCGGGCTTTTTSSCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEE
T ss_pred HHhCCccccccccCCCeeEEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEE
Confidence 98732 22 1 4799999875322 456677654 66799999987
No 170
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.99 E-value=4.7e-09 Score=85.43 Aligned_cols=102 Identities=15% Similarity=0.084 Sum_probs=76.7
Q ss_pred HHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcC---
Q 027409 34 SAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGE--- 110 (223)
Q Consensus 34 ~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~--- 110 (223)
...+...++.+|||||||+|. .+.+++.. +.+++.+|+++++++.|+++ . . ++++.+|+.+....
T Consensus 45 ~~~~~~~~~~~vLdiG~G~G~--~~~~l~~~----~~~v~~vD~s~~~~~~a~~~---~-~--~~~~~~~~~~~~~~~~~ 112 (227)
T 3e8s_A 45 LLAILGRQPERVLDLGCGEGW--LLRALADR----GIEAVGVDGDRTLVDAARAA---G-A--GEVHLASYAQLAEAKVP 112 (227)
T ss_dssp HHHHHHTCCSEEEEETCTTCH--HHHHHHTT----TCEEEEEESCHHHHHHHHHT---C-S--SCEEECCHHHHHTTCSC
T ss_pred HHHhhcCCCCEEEEeCCCCCH--HHHHHHHC----CCEEEEEcCCHHHHHHHHHh---c-c--cccchhhHHhhcccccc
Confidence 333445667999999999998 66666532 67999999999999999987 2 1 57888999886332
Q ss_pred CC-CccEEEEeCC--CcccHHHHHHh-ccCCCceEEEEeCC
Q 027409 111 LK-GVDFLVVDCT--SKDFARVLRFA-RFSNKGAVLAFKNA 147 (223)
Q Consensus 111 L~-~fDfVFIDa~--K~~Y~~~f~~~-~~l~~GgvIV~DNv 147 (223)
.+ .||+|+.... ..+...+++.+ +.|+|||.+++...
T Consensus 113 ~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~ 153 (227)
T 3e8s_A 113 VGKDYDLICANFALLHQDIIELLSAMRTLLVPGGALVIQTL 153 (227)
T ss_dssp CCCCEEEEEEESCCCSSCCHHHHHHHHHTEEEEEEEEEEEC
T ss_pred cCCCccEEEECchhhhhhHHHHHHHHHHHhCCCeEEEEEec
Confidence 23 5999998754 45667788755 67799999988654
No 171
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.99 E-value=2.9e-09 Score=84.57 Aligned_cols=104 Identities=13% Similarity=-0.047 Sum_probs=76.8
Q ss_pred HHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhc
Q 027409 30 AELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMG 109 (223)
Q Consensus 30 g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~ 109 (223)
..+|..+ ..+..+|||||||.|. .+++++.. +.+++.+|++++.++.|++++.+ ++++.+|+.+.-.
T Consensus 37 ~~~l~~~--~~~~~~vLdiG~G~G~--~~~~l~~~----~~~v~~~D~~~~~~~~a~~~~~~-----~~~~~~d~~~~~~ 103 (195)
T 3cgg_A 37 ARLIDAM--APRGAKILDAGCGQGR--IGGYLSKQ----GHDVLGTDLDPILIDYAKQDFPE-----ARWVVGDLSVDQI 103 (195)
T ss_dssp HHHHHHH--SCTTCEEEEETCTTTH--HHHHHHHT----TCEEEEEESCHHHHHHHHHHCTT-----SEEEECCTTTSCC
T ss_pred HHHHHHh--ccCCCeEEEECCCCCH--HHHHHHHC----CCcEEEEcCCHHHHHHHHHhCCC-----CcEEEcccccCCC
Confidence 4566665 4578899999999998 66677643 56999999999999999987743 5889999887311
Q ss_pred CCCCccEEEEeCCC------cccHHHHHHh-ccCCCceEEEEeC
Q 027409 110 ELKGVDFLVVDCTS------KDFARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 110 ~L~~fDfVFIDa~K------~~Y~~~f~~~-~~l~~GgvIV~DN 146 (223)
.-+.||+|+....- ++...+++.+ +.++|||.++...
T Consensus 104 ~~~~~D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~ 147 (195)
T 3cgg_A 104 SETDFDLIVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGF 147 (195)
T ss_dssp CCCCEEEEEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCceeEEEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 12479999997432 2335667654 5679999888754
No 172
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.99 E-value=2.3e-09 Score=96.16 Aligned_cols=98 Identities=14% Similarity=0.123 Sum_probs=77.2
Q ss_pred HhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCC-CCc
Q 027409 38 AGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGEL-KGV 114 (223)
Q Consensus 38 ~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L-~~f 114 (223)
...+.++|||||||+|. .++.+|.+ ..++|+.+|.++ +++.|++++++. |+. |+++.||+.+. .+ ++|
T Consensus 47 ~~~~~~~VLDiGcGtG~--ls~~la~~---g~~~V~~vD~s~-~~~~a~~~~~~~-~l~~~v~~~~~d~~~~--~~~~~~ 117 (348)
T 2y1w_A 47 TDFKDKIVLDVGCGSGI--LSFFAAQA---GARKIYAVEAST-MAQHAEVLVKSN-NLTDRIVVIPGKVEEV--SLPEQV 117 (348)
T ss_dssp GGTTTCEEEEETCTTSH--HHHHHHHT---TCSEEEEEECST-HHHHHHHHHHHT-TCTTTEEEEESCTTTC--CCSSCE
T ss_pred ccCCcCEEEEcCCCccH--HHHHHHhC---CCCEEEEECCHH-HHHHHHHHHHHc-CCCCcEEEEEcchhhC--CCCCce
Confidence 34578899999999998 67676643 246999999996 889999999998 885 99999999874 12 479
Q ss_pred cEEEEeCC-----CcccHHHHHHh-ccCCCceEEEE
Q 027409 115 DFLVVDCT-----SKDFARVLRFA-RFSNKGAVLAF 144 (223)
Q Consensus 115 DfVFIDa~-----K~~Y~~~f~~~-~~l~~GgvIV~ 144 (223)
|+|+...- .+.+.+.+..+ +.|+|||+++.
T Consensus 118 D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~ 153 (348)
T 2y1w_A 118 DIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 153 (348)
T ss_dssp EEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEES
T ss_pred eEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEE
Confidence 99999853 35566777654 56799999984
No 173
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.99 E-value=7.3e-10 Score=96.65 Aligned_cols=103 Identities=12% Similarity=0.085 Sum_probs=76.1
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcC-------------------------
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVG------------------------- 94 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G------------------------- 94 (223)
...++|||||||+|+ .++.||... ++.+|+.||+++++++.|+++++.. +
T Consensus 45 ~~~~~VLDiGCG~G~--~~~~la~~~--~~~~v~gvDis~~~i~~A~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (292)
T 3g07_A 45 FRGRDVLDLGCNVGH--LTLSIACKW--GPSRMVGLDIDSRLIHSARQNIRHY-LSEELRLPPQTLEGDPGAEGEEGTTT 119 (292)
T ss_dssp TTTSEEEEESCTTCH--HHHHHHHHT--CCSEEEEEESCHHHHHHHHHTC------------------------------
T ss_pred cCCCcEEEeCCCCCH--HHHHHHHHc--CCCEEEEECCCHHHHHHHHHHHHhh-hhhhcccccccccccccccccccccc
Confidence 367899999999998 777777543 2469999999999999999998765 4
Q ss_pred ----------------------------------ceEEEEecchHHH---h-cC-CCCccEEEEeCCC---------ccc
Q 027409 95 ----------------------------------WVSEVIVRQAEEV---M-GE-LKGVDFLVVDCTS---------KDF 126 (223)
Q Consensus 95 ----------------------------------~~I~li~GdA~ev---L-~~-L~~fDfVFIDa~K---------~~Y 126 (223)
..|+++.||..+. + +. -+.||+|+.-.-- +..
T Consensus 120 ~~~~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~ 199 (292)
T 3g07_A 120 VRKRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGL 199 (292)
T ss_dssp ----------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHH
T ss_pred ccccccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHH
Confidence 1299999998732 2 22 2489999987642 245
Q ss_pred HHHHHHh-ccCCCceEEEEeCC
Q 027409 127 ARVLRFA-RFSNKGAVLAFKNA 147 (223)
Q Consensus 127 ~~~f~~~-~~l~~GgvIV~DNv 147 (223)
.++|+.+ +.|+|||++|...-
T Consensus 200 ~~~l~~~~~~LkpGG~lil~~~ 221 (292)
T 3g07_A 200 KRMFRRIYRHLRPGGILVLEPQ 221 (292)
T ss_dssp HHHHHHHHHHEEEEEEEEEECC
T ss_pred HHHHHHHHHHhCCCcEEEEecC
Confidence 5677654 67799999998654
No 174
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.98 E-value=1e-09 Score=92.93 Aligned_cols=112 Identities=15% Similarity=0.075 Sum_probs=79.6
Q ss_pred HHHHHHHHhc---CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhc--Cc--e-------
Q 027409 31 ELLSAMAAGW---NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVV--GW--V------- 96 (223)
Q Consensus 31 ~fL~~L~~~~---~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~--G~--~------- 96 (223)
+++..++... ++.+|||+|||+|. .++.++.....++.+|+.+|+++++++.|++++.... |+ .
T Consensus 38 ~l~~~~l~~~~~~~~~~vLD~gcGsG~--~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~ 115 (250)
T 1o9g_A 38 EIFQRALARLPGDGPVTLWDPCCGSGY--LLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQ 115 (250)
T ss_dssp HHHHHHHHTSSCCSCEEEEETTCTTSH--HHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCeEEECCCCCCH--HHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhh
Confidence 5555555543 56799999999998 6767765421235789999999999999999876530 22 1
Q ss_pred ------------------EE-------------EEecchHHHhcC----C-CCccEEEEeC-----CC-------cccHH
Q 027409 97 ------------------SE-------------VIVRQAEEVMGE----L-KGVDFLVVDC-----TS-------KDFAR 128 (223)
Q Consensus 97 ------------------I~-------------li~GdA~evL~~----L-~~fDfVFIDa-----~K-------~~Y~~ 128 (223)
|+ ++.+|+.+.++. . ..||+||.+- .. +.|..
T Consensus 116 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~ 195 (250)
T 1o9g_A 116 SERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAG 195 (250)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHH
T ss_pred hhhcccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHH
Confidence 45 999999886531 2 3799999873 11 44667
Q ss_pred HHHHh-ccCCCceEEEE
Q 027409 129 VLRFA-RFSNKGAVLAF 144 (223)
Q Consensus 129 ~f~~~-~~l~~GgvIV~ 144 (223)
+++.+ +.|+|||+++.
T Consensus 196 ~l~~~~~~LkpgG~l~~ 212 (250)
T 1o9g_A 196 LLRSLASALPAHAVIAV 212 (250)
T ss_dssp HHHHHHHHSCTTCEEEE
T ss_pred HHHHHHHhcCCCcEEEE
Confidence 77754 67889998775
No 175
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.98 E-value=8.4e-10 Score=91.31 Aligned_cols=110 Identities=6% Similarity=-0.078 Sum_probs=76.0
Q ss_pred CcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhh------------
Q 027409 25 KESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDV------------ 92 (223)
Q Consensus 25 i~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a------------ 92 (223)
+.|...+++..+ ......+|||+|||+|+ .+.+||.. +.+|+.||+++++++.|++..+..
T Consensus 7 ~~~~l~~~~~~l-~~~~~~~vLD~GCG~G~--~~~~la~~----g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~ 79 (203)
T 1pjz_A 7 VNKDLQQYWSSL-NVVPGARVLVPLCGKSQ--DMSWLSGQ----GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVY 79 (203)
T ss_dssp STHHHHHHHHHH-CCCTTCEEEETTTCCSH--HHHHHHHH----CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEE
T ss_pred CCHHHHHHHHhc-ccCCCCEEEEeCCCCcH--hHHHHHHC----CCeEEEEeCCHHHHHHHHHHccCCcccccccccccc
Confidence 445555555443 23467899999999998 78888753 569999999999999999876531
Q ss_pred cCceEEEEecchHHHhcC-CCCccEEEEeCCC-----cccHHHHHH-hccCCCceE
Q 027409 93 VGWVSEVIVRQAEEVMGE-LKGVDFLVVDCTS-----KDFARVLRF-ARFSNKGAV 141 (223)
Q Consensus 93 ~G~~I~li~GdA~evL~~-L~~fDfVFIDa~K-----~~Y~~~f~~-~~~l~~Ggv 141 (223)
.+..|+++.||+.+.-.. .+.||+|+.-+.- +.-..++.. .+.|+|||.
T Consensus 80 ~~~~v~~~~~d~~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~ 135 (203)
T 1pjz_A 80 AAPGIEIWCGDFFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACS 135 (203)
T ss_dssp ECSSSEEEEECCSSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEE
T ss_pred cCCccEEEECccccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcE
Confidence 012289999998774222 1479999853321 223446664 477899996
No 176
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.97 E-value=1.4e-09 Score=90.14 Aligned_cols=107 Identities=15% Similarity=-0.007 Sum_probs=77.7
Q ss_pred HHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC
Q 027409 32 LLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL 111 (223)
Q Consensus 32 fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L 111 (223)
+|..++.....++|||||||+|. .+..++.. . .++++.+|+++++++.|++++... .++++.+|+.+....-
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~--~~~~l~~~--~-~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~d~~~~~~~~ 105 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGW--FCRWAHEH--G-ASYVLGLDLSEKMLARARAAGPDT---GITYERADLDKLHLPQ 105 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCH--HHHHHHHT--T-CSEEEEEESCHHHHHHHHHTSCSS---SEEEEECCGGGCCCCT
T ss_pred HHHHhccccCCCEEEEEcCcCCH--HHHHHHHC--C-CCeEEEEcCCHHHHHHHHHhcccC---CceEEEcChhhccCCC
Confidence 44555555678899999999998 66666643 1 239999999999999999876543 2789999998732112
Q ss_pred CCccEEEEeCCCc---ccHHHHHHh-ccCCCceEEEEeC
Q 027409 112 KGVDFLVVDCTSK---DFARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 112 ~~fDfVFIDa~K~---~Y~~~f~~~-~~l~~GgvIV~DN 146 (223)
+.||+|+....-. +...+++.+ +.++|||.+++..
T Consensus 106 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 106 DSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEe
Confidence 4799999876433 346667654 6679999888753
No 177
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.97 E-value=1.1e-09 Score=97.87 Aligned_cols=95 Identities=13% Similarity=0.103 Sum_probs=77.8
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEec
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVR 102 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~G 102 (223)
.++.+...++..++....-.+||++|||.|+ .|+.+|... .+.|+|+++|+++++++.+++|+++. |+. |+++.+
T Consensus 85 ~~Qd~~s~l~~~~l~~~~g~~VLDlcaG~G~--kt~~la~~~-~~~g~V~a~D~~~~~l~~~~~n~~r~-g~~~v~~~~~ 160 (309)
T 2b9e_A 85 ILQDRASCLPAMLLDPPPGSHVIDACAAPGN--KTSHLAALL-KNQGKIFAFDLDAKRLASMATLLARA-GVSCCELAEE 160 (309)
T ss_dssp EECCTGGGHHHHHHCCCTTCEEEESSCTTCH--HHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHT-TCCSEEEEEC
T ss_pred EEECHHHHHHHHHhCCCCCCEEEEeCCChhH--HHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHHc-CCCeEEEEeC
Confidence 3455566666667776777899999999998 777887543 45689999999999999999999999 998 999999
Q ss_pred chHHHhcCC---CCccEEEEeCC
Q 027409 103 QAEEVMGEL---KGVDFLVVDCT 122 (223)
Q Consensus 103 dA~evL~~L---~~fDfVFIDa~ 122 (223)
|+.+..... ..||.||+|+-
T Consensus 161 D~~~~~~~~~~~~~fD~Vl~D~P 183 (309)
T 2b9e_A 161 DFLAVSPSDPRYHEVHYILLDPS 183 (309)
T ss_dssp CGGGSCTTCGGGTTEEEEEECCC
T ss_pred ChHhcCccccccCCCCEEEEcCC
Confidence 999865543 47999999953
No 178
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.97 E-value=2e-09 Score=89.98 Aligned_cols=115 Identities=12% Similarity=0.012 Sum_probs=81.4
Q ss_pred cHHHHHHHHHHHH------hcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEE
Q 027409 26 ESGVAELLSAMAA------GWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEV 99 (223)
Q Consensus 26 ~p~~g~fL~~L~~------~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~l 99 (223)
.|...+.+..++. .....+|||+|||+|+ .+++|+... .++++++.+|+++++++.+.++.++. ..+++
T Consensus 56 ~~~~~~~~~~~~~~l~~~~~~~~~~vLDlG~G~G~--~~~~la~~~-g~~~~v~gvD~s~~~i~~~~~~a~~~--~~v~~ 130 (233)
T 2ipx_A 56 NPFRSKLAAAILGGVDQIHIKPGAKVLYLGAASGT--TVSHVSDIV-GPDGLVYAVEFSHRSGRDLINLAKKR--TNIIP 130 (233)
T ss_dssp CTTTCHHHHHHHTTCSCCCCCTTCEEEEECCTTSH--HHHHHHHHH-CTTCEEEEECCCHHHHHHHHHHHHHC--TTEEE
T ss_pred cccchhHHHHHHhHHheecCCCCCEEEEEcccCCH--HHHHHHHHh-CCCcEEEEEECCHHHHHHHHHHhhcc--CCeEE
Confidence 3444455544443 2345799999999998 777787543 23589999999998877777766553 12899
Q ss_pred EecchHHH--hcCC-CCccEEEEeCC-CcccHHHHH-HhccCCCceEEEEe
Q 027409 100 IVRQAEEV--MGEL-KGVDFLVVDCT-SKDFARVLR-FARFSNKGAVLAFK 145 (223)
Q Consensus 100 i~GdA~ev--L~~L-~~fDfVFIDa~-K~~Y~~~f~-~~~~l~~GgvIV~D 145 (223)
+.||+.+. ++.. +.||+|+.|.. .++...++. ..+.|+|||.+++.
T Consensus 131 ~~~d~~~~~~~~~~~~~~D~V~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 131 VIEDARHPHKYRMLIAMVDVIFADVAQPDQTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp ECSCTTCGGGGGGGCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEcccCChhhhcccCCcEEEEEEcCCCccHHHHHHHHHHHHcCCCeEEEEE
Confidence 99999873 3433 47999999975 333345565 55778999999984
No 179
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.96 E-value=1.5e-09 Score=93.88 Aligned_cols=99 Identities=20% Similarity=0.108 Sum_probs=75.8
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHh--cCC-CCccEE
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVM--GEL-KGVDFL 117 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL--~~L-~~fDfV 117 (223)
.-.+||++|||+|+ .+..+|... .++|+|+++|.++++++.++++.++. +- |+.+.+|+.+.. +.+ +.+|+|
T Consensus 77 pG~~VldlG~G~G~--~~~~la~~V-G~~G~V~avD~s~~~~~~l~~~a~~~-~n-i~~V~~d~~~p~~~~~~~~~vDvV 151 (233)
T 4df3_A 77 EGDRILYLGIASGT--TASHMSDII-GPRGRIYGVEFAPRVMRDLLTVVRDR-RN-IFPILGDARFPEKYRHLVEGVDGL 151 (233)
T ss_dssp TTCEEEEETCTTSH--HHHHHHHHH-CTTCEEEEEECCHHHHHHHHHHSTTC-TT-EEEEESCTTCGGGGTTTCCCEEEE
T ss_pred CCCEEEEecCcCCH--HHHHHHHHh-CCCceEEEEeCCHHHHHHHHHhhHhh-cC-eeEEEEeccCccccccccceEEEE
Confidence 34689999999999 777888765 45799999999999999999887765 32 788889987532 333 479999
Q ss_pred EEeCC-CcccHHHHHHh-ccCCCceEEEE
Q 027409 118 VVDCT-SKDFARVLRFA-RFSNKGAVLAF 144 (223)
Q Consensus 118 FIDa~-K~~Y~~~f~~~-~~l~~GgvIV~ 144 (223)
|.|-. .++...++..+ +.|+|||.++.
T Consensus 152 f~d~~~~~~~~~~l~~~~r~LKpGG~lvI 180 (233)
T 4df3_A 152 YADVAQPEQAAIVVRNARFFLRDGGYMLM 180 (233)
T ss_dssp EECCCCTTHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEeccCChhHHHHHHHHHHhccCCCEEEE
Confidence 99965 44455666544 67888888765
No 180
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.96 E-value=2.9e-09 Score=90.02 Aligned_cols=89 Identities=10% Similarity=-0.042 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHHhc-----CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEE
Q 027409 27 SGVAELLSAMAAGW-----NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEV 99 (223)
Q Consensus 27 p~~g~fL~~L~~~~-----~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~l 99 (223)
|++..++..++... +..+|||+|||+|. .++.+|... ++++++.+|+++++++.|+++++.. |+. |++
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~--~~~~la~~~--~~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~v~~ 120 (254)
T 2h00_A 46 LNYIHWVEDLIGHQDSDKSTLRRGIDIGTGASC--IYPLLGATL--NGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKV 120 (254)
T ss_dssp HHHHHHHHHHHCCCCGGGCCCCEEEEESCTTTT--HHHHHHHHH--HCCEEEEEESCHHHHHHHHHHHHHT-TCTTTEEE
T ss_pred HHHHHHHHHHHhhccccCCCCCEEEEeCCChhH--HHHHHHHhC--CCCeEEEEECCHHHHHHHHHHHHHc-CCCccEEE
Confidence 67777887777654 35699999999998 666666432 3579999999999999999999998 886 999
Q ss_pred EecchHH-HhcCC-----CCccEEEEe
Q 027409 100 IVRQAEE-VMGEL-----KGVDFLVVD 120 (223)
Q Consensus 100 i~GdA~e-vL~~L-----~~fDfVFID 120 (223)
+.||+.+ .+..+ +.||+|+.+
T Consensus 121 ~~~d~~~~~~~~~~~~~~~~fD~i~~n 147 (254)
T 2h00_A 121 VKVPQKTLLMDALKEESEIIYDFCMCN 147 (254)
T ss_dssp EECCTTCSSTTTSTTCCSCCBSEEEEC
T ss_pred EEcchhhhhhhhhhcccCCcccEEEEC
Confidence 9999877 33333 269999998
No 181
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.94 E-value=7.3e-09 Score=87.81 Aligned_cols=105 Identities=10% Similarity=-0.117 Sum_probs=75.8
Q ss_pred hcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCch------HHHHHHHHHHhhcCce--EEEEecc-hHH-Hh
Q 027409 39 GWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDER------SRLAYVKAMYDVVGWV--SEVIVRQ-AEE-VM 108 (223)
Q Consensus 39 ~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e------~~~~Ar~~~~~a~G~~--I~li~Gd-A~e-vL 108 (223)
....++|||||||.|+ .++.++... .++++++.+|++++ +++.|+++++.. |+. |+++.+| ... .+
T Consensus 41 ~~~~~~vLDiGcG~G~--~~~~l~~~~-g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~-~~~~~v~~~~~d~~~~~~~ 116 (275)
T 3bkx_A 41 VKPGEKILEIGCGQGD--LSAVLADQV-GSSGHVTGIDIASPDYGAPLTLGQAWNHLLAG-PLGDRLTVHFNTNLSDDLG 116 (275)
T ss_dssp CCTTCEEEEESCTTSH--HHHHHHHHH-CTTCEEEEECSSCTTCCSSSCHHHHHHHHHTS-TTGGGEEEECSCCTTTCCG
T ss_pred CCCCCEEEEeCCCCCH--HHHHHHHHh-CCCCEEEEEECCccccccHHHHHHHHHHHHhc-CCCCceEEEECChhhhccC
Confidence 3466799999999998 777776543 23589999999997 999999999998 875 9999999 211 12
Q ss_pred c-CCCCccEEEEeCCCc---ccHHHHHHhcc-CCCceEEEEeCC
Q 027409 109 G-ELKGVDFLVVDCTSK---DFARVLRFARF-SNKGAVLAFKNA 147 (223)
Q Consensus 109 ~-~L~~fDfVFIDa~K~---~Y~~~f~~~~~-l~~GgvIV~DNv 147 (223)
+ .-+.||+|+....-. +...+++.++. +++||.++....
T Consensus 117 ~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~ 160 (275)
T 3bkx_A 117 PIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEW 160 (275)
T ss_dssp GGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEE
T ss_pred CCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence 2 114799999875432 22445566654 477888777553
No 182
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.94 E-value=3.3e-09 Score=95.30 Aligned_cols=102 Identities=7% Similarity=-0.019 Sum_probs=79.5
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHH---hcCCCCc
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEV---MGELKGV 114 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~ev---L~~L~~f 114 (223)
.++++|||||||+|. .++.++.+. ++.+++.+|. |+.++.|++++++. |+. |+++.||+.+. ++ +.|
T Consensus 178 ~~~~~vlDvG~G~G~--~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~~~~~-~~~~~v~~~~~d~~~~~~~~p--~~~ 249 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGK--WATQCVQYN--KEVEVTIVDL-PQQLEMMRKQTAGL-SGSERIHGHGANLLDRDVPFP--TGF 249 (363)
T ss_dssp GCCSEEEEESCTTCH--HHHHHHHHS--TTCEEEEEEC-HHHHHHHHHHHTTC-TTGGGEEEEECCCCSSSCCCC--CCC
T ss_pred cCCCEEEEeCCCcCH--HHHHHHHhC--CCCEEEEEeC-HHHHHHHHHHHHhc-CcccceEEEEccccccCCCCC--CCc
Confidence 588999999999998 777777543 4679999999 99999999999998 875 99999999874 34 589
Q ss_pred cEEEEeC-----CCcccHHHHHHh-ccCCCceEE-EEeCCCC
Q 027409 115 DFLVVDC-----TSKDFARVLRFA-RFSNKGAVL-AFKNAFQ 149 (223)
Q Consensus 115 DfVFIDa-----~K~~Y~~~f~~~-~~l~~GgvI-V~DNvl~ 149 (223)
|+|++-. ..++...++..+ +.++|||.+ |.|.++.
T Consensus 250 D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 291 (363)
T 3dp7_A 250 DAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWD 291 (363)
T ss_dssp SEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTT
T ss_pred CEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccC
Confidence 9999843 333445677655 567888866 5555553
No 183
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.93 E-value=2.7e-09 Score=89.33 Aligned_cols=117 Identities=7% Similarity=-0.081 Sum_probs=85.9
Q ss_pred CCcHHHHHHHHHHHHhc---CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEE
Q 027409 24 IKESGVAELLSAMAAGW---NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVI 100 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~---~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li 100 (223)
.+.|..-+.+..+++.. ...+|||||||+|. .++.++... +++++.+|+++++++.|++++... ..|+++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~--~~~~l~~~~---~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~ 107 (266)
T 3ujc_A 35 YISSGGLEATKKILSDIELNENSKVLDIGSGLGG--GCMYINEKY---GAHTHGIDICSNIVNMANERVSGN--NKIIFE 107 (266)
T ss_dssp CCSTTHHHHHHHHTTTCCCCTTCEEEEETCTTSH--HHHHHHHHH---CCEEEEEESCHHHHHHHHHTCCSC--TTEEEE
T ss_pred ccccchHHHHHHHHHhcCCCCCCEEEEECCCCCH--HHHHHHHHc---CCEEEEEeCCHHHHHHHHHHhhcC--CCeEEE
Confidence 45555555555555544 55699999999998 677777543 579999999999999999887664 228999
Q ss_pred ecchHHHhcC-CCCccEEEEeCCC-----cccHHHHHHh-ccCCCceEEEEeCCC
Q 027409 101 VRQAEEVMGE-LKGVDFLVVDCTS-----KDFARVLRFA-RFSNKGAVLAFKNAF 148 (223)
Q Consensus 101 ~GdA~evL~~-L~~fDfVFIDa~K-----~~Y~~~f~~~-~~l~~GgvIV~DNvl 148 (223)
.+|+.+. +- -+.||+|+....- .+...+++.+ +.|+|||.++.-...
T Consensus 108 ~~d~~~~-~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (266)
T 3ujc_A 108 ANDILTK-EFPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYC 161 (266)
T ss_dssp ECCTTTC-CCCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred ECccccC-CCCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 9999874 32 2489999997643 3445666644 667999998887643
No 184
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.93 E-value=1.4e-09 Score=89.51 Aligned_cols=101 Identities=17% Similarity=0.087 Sum_probs=72.9
Q ss_pred hcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHH----HHHHHHhhcCce-EEEEecchHHHhcCCCC
Q 027409 39 GWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLA----YVKAMYDVVGWV-SEVIVRQAEEVMGELKG 113 (223)
Q Consensus 39 ~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~----Ar~~~~~a~G~~-I~li~GdA~evL~~L~~ 113 (223)
.....+|||||||+|+ .++.|+.. .++++++.+|+++++++. |+++..+. ++. ++++.+|+.+ ++....
T Consensus 25 ~~~~~~vLDiGcG~G~--~~~~la~~--~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~-~~~~v~~~~~d~~~-l~~~~~ 98 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGK--HPYKVARQ--NPSRLVVALDADKSRMEKISAKAAAKPAKG-GLPNLLYLWATAER-LPPLSG 98 (218)
T ss_dssp TTSSEEEEEESCTTCH--HHHHHHHH--CTTEEEEEEESCGGGGHHHHHHHTSCGGGT-CCTTEEEEECCSTT-CCSCCC
T ss_pred ccCCCEEEEecCCCCH--HHHHHHHH--CCCCEEEEEECCHHHHHHHHHHHHHhhhhc-CCCceEEEecchhh-CCCCCC
Confidence 5577899999999998 77777653 347899999999997775 34444456 776 9999999988 453322
Q ss_pred ccEEEEeCC-C-------cccHHHHHHh-ccCCCceEEEEe
Q 027409 114 VDFLVVDCT-S-------KDFARVLRFA-RFSNKGAVLAFK 145 (223)
Q Consensus 114 fDfVFIDa~-K-------~~Y~~~f~~~-~~l~~GgvIV~D 145 (223)
.|.|++.-. . .+...+++.+ +.|+|||.+++.
T Consensus 99 ~d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 99 VGELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp EEEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEE
T ss_pred CCEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEE
Confidence 277775542 1 1226677655 677999998874
No 185
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.93 E-value=6.1e-09 Score=91.26 Aligned_cols=90 Identities=17% Similarity=0.106 Sum_probs=73.3
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEe
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIV 101 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~ 101 (223)
.++|.+.+.+-..+......+|||||||+|+ .+.+|+.. +++++.||+|+++++.|+++++.. |.. ++++.
T Consensus 11 l~d~~i~~~i~~~~~~~~~~~VLDiG~G~G~--lt~~L~~~----~~~v~~vD~~~~~~~~a~~~~~~~-~~~~~v~~~~ 83 (285)
T 1zq9_A 11 LKNPLIINSIIDKAALRPTDVVLEVGPGTGN--MTVKLLEK----AKKVVACELDPRLVAELHKRVQGT-PVASKLQVLV 83 (285)
T ss_dssp ECCHHHHHHHHHHTCCCTTCEEEEECCTTST--THHHHHHH----SSEEEEEESCHHHHHHHHHHHTTS-TTGGGEEEEE
T ss_pred cCCHHHHHHHHHhcCCCCCCEEEEEcCcccH--HHHHHHhh----CCEEEEEECCHHHHHHHHHHHHhc-CCCCceEEEE
Confidence 4577776666666666677899999999998 77777754 469999999999999999999887 773 99999
Q ss_pred cchHHHhcCCCCccEEEEeCC
Q 027409 102 RQAEEVMGELKGVDFLVVDCT 122 (223)
Q Consensus 102 GdA~evL~~L~~fDfVFIDa~ 122 (223)
||+.+. .+..||.|+.+.-
T Consensus 84 ~D~~~~--~~~~fD~vv~nlp 102 (285)
T 1zq9_A 84 GDVLKT--DLPFFDTCVANLP 102 (285)
T ss_dssp SCTTTS--CCCCCSEEEEECC
T ss_pred cceecc--cchhhcEEEEecC
Confidence 999874 3447999999764
No 186
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.92 E-value=3.8e-09 Score=93.51 Aligned_cols=98 Identities=14% Similarity=0.144 Sum_probs=79.4
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCCCCccEE
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGELKGVDFL 117 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L~~fDfV 117 (223)
..-++||++|||+|+ .+|.+|.. ..++|+++|+||+.++.+++|++.. |++ |+++.|||.+.+++ ..||.|
T Consensus 124 ~~g~~VlD~~aG~G~--~~i~~a~~---g~~~V~avD~np~a~~~~~~N~~~N-~v~~~v~~~~~D~~~~~~~-~~~D~V 196 (278)
T 3k6r_A 124 KPDELVVDMFAGIGH--LSLPIAVY---GKAKVIAIEKDPYTFKFLVENIHLN-KVEDRMSAYNMDNRDFPGE-NIADRI 196 (278)
T ss_dssp CTTCEEEETTCTTTT--TTHHHHHH---TCCEEEEECCCHHHHHHHHHHHHHT-TCTTTEEEECSCTTTCCCC-SCEEEE
T ss_pred CCCCEEEEecCcCcH--HHHHHHHh---cCCeEEEEECCHHHHHHHHHHHHHc-CCCCcEEEEeCcHHHhccc-cCCCEE
Confidence 356889999999998 77776643 2368999999999999999999999 987 99999999987653 479999
Q ss_pred EEeCCCcccHHHHH-HhccCCCceEEEEe
Q 027409 118 VVDCTSKDFARVLR-FARFSNKGAVLAFK 145 (223)
Q Consensus 118 FIDa~K~~Y~~~f~-~~~~l~~GgvIV~D 145 (223)
++|--. .-.++++ +++.+++||+|.+-
T Consensus 197 i~~~p~-~~~~~l~~a~~~lk~gG~ih~~ 224 (278)
T 3k6r_A 197 LMGYVV-RTHEFIPKALSIAKDGAIIHYH 224 (278)
T ss_dssp EECCCS-SGGGGHHHHHHHEEEEEEEEEE
T ss_pred EECCCC-cHHHHHHHHHHHcCCCCEEEEE
Confidence 999643 3346776 45677999998653
No 187
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.91 E-value=8.5e-09 Score=103.65 Aligned_cols=114 Identities=9% Similarity=-0.087 Sum_probs=84.8
Q ss_pred HHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhh-----cCce-EEEEec
Q 027409 29 VAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDV-----VGWV-SEVIVR 102 (223)
Q Consensus 29 ~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a-----~G~~-I~li~G 102 (223)
.-+++..++...++++|||||||+|+ .+++||.. .++.++|+.||+++++++.|++.++.. .|+. |+++.|
T Consensus 709 Rle~LLelL~~~~g~rVLDVGCGTG~--lai~LAr~-g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqG 785 (950)
T 3htx_A 709 RVEYALKHIRESSASTLVDFGCGSGS--LLDSLLDY-PTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDG 785 (950)
T ss_dssp HHHHHHHHHHHSCCSEEEEETCSSSH--HHHHHTSS-CCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEES
T ss_pred HHHHHHHHhcccCCCEEEEECCCCCH--HHHHHHHh-CCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEEC
Confidence 35555556666789999999999998 77677532 123479999999999999999987642 1555 999999
Q ss_pred chHHHhcCCCCccEEEEeCCCcccH-----HHHHH-hccCCCceEEEEe
Q 027409 103 QAEEVMGELKGVDFLVVDCTSKDFA-----RVLRF-ARFSNKGAVLAFK 145 (223)
Q Consensus 103 dA~evL~~L~~fDfVFIDa~K~~Y~-----~~f~~-~~~l~~GgvIV~D 145 (223)
|+.+.-...+.||+|+.-..-++.. .+++. .+.|+||.+||.+
T Consensus 786 Da~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG~LIIST 834 (950)
T 3htx_A 786 SILEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPKLLIVST 834 (950)
T ss_dssp CTTSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred chHhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCCEEEEEe
Confidence 9988433346899999987766654 35554 4778999666654
No 188
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.91 E-value=9.4e-10 Score=93.22 Aligned_cols=112 Identities=19% Similarity=0.113 Sum_probs=80.6
Q ss_pred CcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCC-chHHHHH---HHHHHhhcCce-EEE
Q 027409 25 KESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPD-ERSRLAY---VKAMYDVVGWV-SEV 99 (223)
Q Consensus 25 i~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d-~e~~~~A---r~~~~~a~G~~-I~l 99 (223)
++-...+++..+. ....+|||||||+|. .++.||. ..++++++.||++ +.+++.| +++.++. |+. |++
T Consensus 10 ~~~~~~~~~~~~~--~~~~~vLDiGCG~G~--~~~~la~--~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~-~~~~v~~ 82 (225)
T 3p2e_A 10 VDLSKDELTEIIG--QFDRVHIDLGTGDGR--NIYKLAI--NDQNTFYIGIDPVKENLFDISKKIIKKPSKG-GLSNVVF 82 (225)
T ss_dssp ECCCHHHHHHHHT--TCSEEEEEETCTTSH--HHHHHHH--TCTTEEEEEECSCCGGGHHHHHHHTSCGGGT-CCSSEEE
T ss_pred ccCCHHHHHHHhC--CCCCEEEEEeccCcH--HHHHHHH--hCCCCEEEEEeCCHHHHHHHHHHHHHHHHHc-CCCCeEE
Confidence 3333455555443 466799999999997 6767764 3457899999999 5555555 8888888 988 999
Q ss_pred EecchHHHhcC-C-CCccEEEEeCC--------CcccHHHHHHh-ccCCCceEEEE
Q 027409 100 IVRQAEEVMGE-L-KGVDFLVVDCT--------SKDFARVLRFA-RFSNKGAVLAF 144 (223)
Q Consensus 100 i~GdA~evL~~-L-~~fDfVFIDa~--------K~~Y~~~f~~~-~~l~~GgvIV~ 144 (223)
+.+|+.+. +. . +.+|.|++.-. ...+..+|..+ +.|+|||.++.
T Consensus 83 ~~~d~~~l-~~~~~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 83 VIAAAESL-PFELKNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp ECCBTTBC-CGGGTTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred EEcCHHHh-hhhccCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 99999875 43 2 46777776531 12356677655 67799999988
No 189
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.91 E-value=3.5e-09 Score=94.34 Aligned_cols=102 Identities=14% Similarity=0.097 Sum_probs=77.4
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCCCCccEE
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGELKGVDFL 117 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L~~fDfV 117 (223)
.+..+|||||||+|. .++.++... ++.+++.+|+ ++.++.|++++.+. |+. |+++.||+.+.++ ..||+|
T Consensus 181 ~~~~~vlDvG~G~G~--~~~~l~~~~--~~~~~~~~D~-~~~~~~a~~~~~~~-~~~~~v~~~~~d~~~~~~--~~~D~v 252 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGG--MLAAIALRA--PHLRGTLVEL-AGPAERARRRFADA-GLADRVTVAEGDFFKPLP--VTADVV 252 (374)
T ss_dssp TTCCEEEEETCTTSH--HHHHHHHHC--TTCEEEEEEC-HHHHHHHHHHHHHT-TCTTTEEEEECCTTSCCS--CCEEEE
T ss_pred CCCCEEEEECCCcCH--HHHHHHHHC--CCCEEEEEeC-HHHHHHHHHHHHhc-CCCCceEEEeCCCCCcCC--CCCCEE
Confidence 467899999999998 677777543 4679999999 99999999999998 886 9999999987444 259999
Q ss_pred EEeCCCc-----ccHHHHHHh-ccCCCce-EEEEeC--CCC
Q 027409 118 VVDCTSK-----DFARVLRFA-RFSNKGA-VLAFKN--AFQ 149 (223)
Q Consensus 118 FIDa~K~-----~Y~~~f~~~-~~l~~Gg-vIV~DN--vl~ 149 (223)
++..--. ....++..+ +.++||| +++.|. ++.
T Consensus 253 ~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~ 293 (374)
T 1qzz_A 253 LLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEG 293 (374)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH---
T ss_pred EEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcC
Confidence 9965433 234667655 5678999 555666 553
No 190
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.91 E-value=8.9e-09 Score=92.69 Aligned_cols=102 Identities=15% Similarity=0.112 Sum_probs=79.3
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCCCCccEE
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGELKGVDFL 117 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L~~fDfV 117 (223)
.+..+|||||||+|. .++.++.. .++.+++.+|+ ++.++.|++++.+. |+. |+++.||..+-++. .||+|
T Consensus 201 ~~~~~vlDvG~G~G~--~~~~l~~~--~p~~~~~~~D~-~~~~~~a~~~~~~~-~l~~~v~~~~~d~~~~~p~--~~D~v 272 (369)
T 3gwz_A 201 SGAATAVDIGGGRGS--LMAAVLDA--FPGLRGTLLER-PPVAEEARELLTGR-GLADRCEILPGDFFETIPD--GADVY 272 (369)
T ss_dssp TTCSEEEEETCTTSH--HHHHHHHH--CTTCEEEEEEC-HHHHHHHHHHHHHT-TCTTTEEEEECCTTTCCCS--SCSEE
T ss_pred ccCcEEEEeCCCccH--HHHHHHHH--CCCCeEEEEcC-HHHHHHHHHhhhhc-CcCCceEEeccCCCCCCCC--CceEE
Confidence 467899999999998 77777765 34679999999 99999999999998 876 99999999854443 79999
Q ss_pred EEeC-----CCcccHHHHHHh-ccCCCceEEEEeC-CCC
Q 027409 118 VVDC-----TSKDFARVLRFA-RFSNKGAVLAFKN-AFQ 149 (223)
Q Consensus 118 FIDa-----~K~~Y~~~f~~~-~~l~~GgvIV~DN-vl~ 149 (223)
|+-. ..+...++++.+ +.++|||.++.-+ ++.
T Consensus 273 ~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~ 311 (369)
T 3gwz_A 273 LIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLID 311 (369)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCC
T ss_pred EhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 9844 334445678765 5678888776544 443
No 191
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.91 E-value=8.9e-09 Score=85.96 Aligned_cols=99 Identities=13% Similarity=0.125 Sum_probs=73.3
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcC-CCCccEEE
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGE-LKGVDFLV 118 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~-L~~fDfVF 118 (223)
.+..+|||||||+|. .+..|+... ..+++.+|+++++++.|++++... ..++++.+|+.+. +- -+.||+|+
T Consensus 92 ~~~~~vLDiG~G~G~--~~~~l~~~~---~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~-~~~~~~fD~v~ 163 (254)
T 1xtp_A 92 HGTSRALDCGAGIGR--ITKNLLTKL---YATTDLLEPVKHMLEEAKRELAGM--PVGKFILASMETA-TLPPNTYDLIV 163 (254)
T ss_dssp CCCSEEEEETCTTTH--HHHHTHHHH---CSEEEEEESCHHHHHHHHHHTTTS--SEEEEEESCGGGC-CCCSSCEEEEE
T ss_pred cCCCEEEEECCCcCH--HHHHHHHhh---cCEEEEEeCCHHHHHHHHHHhccC--CceEEEEccHHHC-CCCCCCeEEEE
Confidence 357899999999998 666666543 458999999999999999988764 2389999999773 32 24799999
Q ss_pred EeCCCcc-----cHHHHHHh-ccCCCceEEEEeC
Q 027409 119 VDCTSKD-----FARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 119 IDa~K~~-----Y~~~f~~~-~~l~~GgvIV~DN 146 (223)
.-..-.. ...++..+ +.|+|||.++.-.
T Consensus 164 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 197 (254)
T 1xtp_A 164 IQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKE 197 (254)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 8765333 34566544 5678888766543
No 192
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.90 E-value=8.2e-09 Score=90.25 Aligned_cols=102 Identities=14% Similarity=0.035 Sum_probs=79.0
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCC-CCccE
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGEL-KGVDF 116 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L-~~fDf 116 (223)
.+..+|||||||+|. .++.++... ++.+++.+|++ +.++.|++++.+. |+. |+++.||+.+. .+ +.||+
T Consensus 164 ~~~~~vlDvG~G~G~--~~~~l~~~~--p~~~~~~~D~~-~~~~~a~~~~~~~-~~~~~v~~~~~d~~~~--~~~~~~D~ 235 (335)
T 2r3s_A 164 IEPLKVLDISASHGL--FGIAVAQHN--PNAEIFGVDWA-SVLEVAKENARIQ-GVASRYHTIAGSAFEV--DYGNDYDL 235 (335)
T ss_dssp CCCSEEEEETCTTCH--HHHHHHHHC--TTCEEEEEECH-HHHHHHHHHHHHH-TCGGGEEEEESCTTTS--CCCSCEEE
T ss_pred CCCCEEEEECCCcCH--HHHHHHHHC--CCCeEEEEecH-HHHHHHHHHHHhc-CCCcceEEEecccccC--CCCCCCcE
Confidence 567899999999998 666776543 46799999999 9999999999998 886 99999999763 23 35999
Q ss_pred EEEeC-----CCcccHHHHHHh-ccCCCce-EEEEeCCCC
Q 027409 117 LVVDC-----TSKDFARVLRFA-RFSNKGA-VLAFKNAFQ 149 (223)
Q Consensus 117 VFIDa-----~K~~Y~~~f~~~-~~l~~Gg-vIV~DNvl~ 149 (223)
|++-. ..++..++++.+ +.++||| +++.|.+..
T Consensus 236 v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 275 (335)
T 2r3s_A 236 VLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPN 275 (335)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCC
T ss_pred EEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCC
Confidence 99933 334456777655 5678999 666666553
No 193
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.90 E-value=9.2e-09 Score=89.44 Aligned_cols=111 Identities=16% Similarity=0.124 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHHh---cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeC-CchHHHHHHHHH-----HhhcCc--
Q 027409 27 SGVAELLSAMAAG---WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVP-DERSRLAYVKAM-----YDVVGW-- 95 (223)
Q Consensus 27 p~~g~fL~~L~~~---~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~-d~e~~~~Ar~~~-----~~a~G~-- 95 (223)
|++-.+...+... ...++|||||||+|+ .+++++.. . .++|+.+|+ +++.++.|++|. +.. |+
T Consensus 62 ~~~~~l~~~l~~~~~~~~~~~vLDlG~G~G~--~~~~~a~~--~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~-~~~~ 135 (281)
T 3bzb_A 62 SGARALADTLCWQPELIAGKTVCELGAGAGL--VSIVAFLA--G-ADQVVATDYPDPEILNSLESNIREHTANSC-SSET 135 (281)
T ss_dssp CHHHHHHHHHHHCGGGTTTCEEEETTCTTSH--HHHHHHHT--T-CSEEEEEECSCHHHHHHHHHHHHTTCC--------
T ss_pred cHHHHHHHHHHhcchhcCCCeEEEecccccH--HHHHHHHc--C-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhc-cccc
Confidence 4444445555443 467899999999998 77777642 1 359999999 999999999999 655 65
Q ss_pred ----eEEEE---ecchHHHhc---CCCCccEEEE-eC--CCcccHHHHHHh-ccCC---C--ceEEE
Q 027409 96 ----VSEVI---VRQAEEVMG---ELKGVDFLVV-DC--TSKDFARVLRFA-RFSN---K--GAVLA 143 (223)
Q Consensus 96 ----~I~li---~GdA~evL~---~L~~fDfVFI-Da--~K~~Y~~~f~~~-~~l~---~--GgvIV 143 (223)
.|+++ .|++.+-+. .-+.||+|+. |. ...++..+++.+ +.++ | ||.++
T Consensus 136 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~ 202 (281)
T 3bzb_A 136 VKRASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVAL 202 (281)
T ss_dssp ---CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEE
T ss_pred CCCCCeEEEEecCCCccHHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEE
Confidence 27777 455443332 1257999987 75 245567788765 5567 8 99543
No 194
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.90 E-value=3.3e-09 Score=86.73 Aligned_cols=102 Identities=12% Similarity=0.018 Sum_probs=75.4
Q ss_pred HHHHHH-HhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcC
Q 027409 32 LLSAMA-AGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGE 110 (223)
Q Consensus 32 fL~~L~-~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~ 110 (223)
.+..++ ......+|||||||.|. .+..++.. +.+++.+|+++++++.|++++ . ++++.+|+.+. +.
T Consensus 33 ~~~~~~~~~~~~~~vLDiGcG~G~--~~~~l~~~----~~~v~~vD~s~~~~~~a~~~~--~----~~~~~~d~~~~-~~ 99 (211)
T 3e23_A 33 TLTKFLGELPAGAKILELGCGAGY--QAEAMLAA----GFDVDATDGSPELAAEASRRL--G----RPVRTMLFHQL-DA 99 (211)
T ss_dssp HHHHHHTTSCTTCEEEESSCTTSH--HHHHHHHT----TCEEEEEESCHHHHHHHHHHH--T----SCCEECCGGGC-CC
T ss_pred HHHHHHHhcCCCCcEEEECCCCCH--HHHHHHHc----CCeEEEECCCHHHHHHHHHhc--C----CceEEeeeccC-CC
Confidence 344443 34457899999999998 67677643 579999999999999999887 2 46778998764 33
Q ss_pred CCCccEEEEeCCCc-----ccHHHHHHh-ccCCCceEEEEeC
Q 027409 111 LKGVDFLVVDCTSK-----DFARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 111 L~~fDfVFIDa~K~-----~Y~~~f~~~-~~l~~GgvIV~DN 146 (223)
-+.||+|+....-. +...++..+ +.|+|||.++...
T Consensus 100 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 141 (211)
T 3e23_A 100 IDAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASY 141 (211)
T ss_dssp CSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 35899999976433 344677654 6679999998863
No 195
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.89 E-value=5.5e-09 Score=92.08 Aligned_cols=101 Identities=15% Similarity=0.108 Sum_probs=78.0
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCCCCccEEE
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGELKGVDFLV 118 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L~~fDfVF 118 (223)
++.+|||||||+|. .++.++... ++.+++.+|+ |+.++.|++++.+. |+. |+++.||..+-++. +||+||
T Consensus 169 ~~~~vlDvG~G~G~--~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~~~~~-~~~~~v~~~~~d~~~~~p~--~~D~v~ 240 (332)
T 3i53_A 169 ALGHVVDVGGGSGG--LLSALLTAH--EDLSGTVLDL-QGPASAAHRRFLDT-GLSGRAQVVVGSFFDPLPA--GAGGYV 240 (332)
T ss_dssp GGSEEEEETCTTSH--HHHHHHHHC--TTCEEEEEEC-HHHHHHHHHHHHHT-TCTTTEEEEECCTTSCCCC--SCSEEE
T ss_pred CCCEEEEeCCChhH--HHHHHHHHC--CCCeEEEecC-HHHHHHHHHhhhhc-CcCcCeEEecCCCCCCCCC--CCcEEE
Confidence 46899999999998 777777543 4678999999 99999999999998 885 99999999854443 799999
Q ss_pred Ee-----CCCcccHHHHHHh-ccCCCceEEEE-eCCCC
Q 027409 119 VD-----CTSKDFARVLRFA-RFSNKGAVLAF-KNAFQ 149 (223)
Q Consensus 119 ID-----a~K~~Y~~~f~~~-~~l~~GgvIV~-DNvl~ 149 (223)
+= -..+...+++..+ +.++|||.++. |.+..
T Consensus 241 ~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 278 (332)
T 3i53_A 241 LSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAG 278 (332)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC
T ss_pred EehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCC
Confidence 84 3334456677755 56688887755 44443
No 196
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.89 E-value=2.2e-09 Score=90.16 Aligned_cols=96 Identities=13% Similarity=0.017 Sum_probs=73.3
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC-CCccEEEE
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL-KGVDFLVV 119 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L-~~fDfVFI 119 (223)
..++|||||||+|. .+..++.. . ..+++.+|+++++++.|++++.. ..++++.+|+.+ ++.. +.||+|+.
T Consensus 44 ~~~~vLD~GcG~G~--~~~~l~~~--~-~~~v~~vD~s~~~~~~a~~~~~~---~~~~~~~~d~~~-~~~~~~~fD~v~~ 114 (253)
T 3g5l_A 44 NQKTVLDLGCGFGW--HCIYAAEH--G-AKKVLGIDLSERMLTEAKRKTTS---PVVCYEQKAIED-IAIEPDAYNVVLS 114 (253)
T ss_dssp TTCEEEEETCTTCH--HHHHHHHT--T-CSEEEEEESCHHHHHHHHHHCCC---TTEEEEECCGGG-CCCCTTCEEEEEE
T ss_pred CCCEEEEECCCCCH--HHHHHHHc--C-CCEEEEEECCHHHHHHHHHhhcc---CCeEEEEcchhh-CCCCCCCeEEEEE
Confidence 67899999999997 67677643 1 23999999999999999988761 128999999976 3422 48999999
Q ss_pred eCCC---cccHHHHHHh-ccCCCceEEEEe
Q 027409 120 DCTS---KDFARVLRFA-RFSNKGAVLAFK 145 (223)
Q Consensus 120 Da~K---~~Y~~~f~~~-~~l~~GgvIV~D 145 (223)
...- .+...+++.+ +.|+|||.+++.
T Consensus 115 ~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 115 SLALHYIASFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp ESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred chhhhhhhhHHHHHHHHHHHcCCCcEEEEE
Confidence 7643 3446677654 667999999986
No 197
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.89 E-value=1.5e-09 Score=97.01 Aligned_cols=109 Identities=17% Similarity=0.125 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHH
Q 027409 28 GVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEV 107 (223)
Q Consensus 28 ~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~ev 107 (223)
.+..++..+ ......+|||+|||+|+ .+++++.. .++++++.+|.++++++.|+++++.. |+.++++.+|+.+.
T Consensus 184 ~~~~ll~~l-~~~~~~~VLDlGcG~G~--~~~~la~~--~~~~~v~~vD~s~~~l~~a~~~~~~~-~~~~~~~~~d~~~~ 257 (343)
T 2pjd_A 184 GSQLLLSTL-TPHTKGKVLDVGCGAGV--LSVAFARH--SPKIRLTLCDVSAPAVEASRATLAAN-GVEGEVFASNVFSE 257 (343)
T ss_dssp HHHHHHHHS-CTTCCSBCCBTTCTTSH--HHHHHHHH--CTTCBCEEEESBHHHHHHHHHHHHHT-TCCCEEEECSTTTT
T ss_pred HHHHHHHhc-CcCCCCeEEEecCccCH--HHHHHHHH--CCCCEEEEEECCHHHHHHHHHHHHHh-CCCCEEEEcccccc
Confidence 344444433 23356799999999998 77777654 24569999999999999999999998 88888899999774
Q ss_pred hcCCCCccEEEEeCCC--------cccHHHHHHh-ccCCCceEEEE
Q 027409 108 MGELKGVDFLVVDCTS--------KDFARVLRFA-RFSNKGAVLAF 144 (223)
Q Consensus 108 L~~L~~fDfVFIDa~K--------~~Y~~~f~~~-~~l~~GgvIV~ 144 (223)
.+ +.||+|+.+.-- .....++..+ +.|+|||.+++
T Consensus 258 ~~--~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i 301 (343)
T 2pjd_A 258 VK--GRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRI 301 (343)
T ss_dssp CC--SCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred cc--CCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEE
Confidence 42 479999997532 2345667654 66788887665
No 198
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.88 E-value=7.2e-09 Score=97.66 Aligned_cols=107 Identities=14% Similarity=0.119 Sum_probs=80.0
Q ss_pred HHHHHHHHHHh---cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecc
Q 027409 29 VAELLSAMAAG---WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQ 103 (223)
Q Consensus 29 ~g~fL~~L~~~---~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~Gd 103 (223)
+..+...++.. .+.++|||||||+|. .++.+|.. ...+|+.+|+++ +++.|++++++. |+. |+++.||
T Consensus 143 t~~~~~~il~~l~~~~~~~VLDiGcGtG~--la~~la~~---~~~~V~gvD~s~-~l~~A~~~~~~~-gl~~~v~~~~~d 215 (480)
T 3b3j_A 143 TGTYQRAILQNHTDFKDKIVLDVGCGSGI--LSFFAAQA---GARKIYAVEAST-MAQHAEVLVKSN-NLTDRIVVIPGK 215 (480)
T ss_dssp HHHHHHHHHHTGGGTTTCEEEEESCSTTH--HHHHHHHT---TCSEEEEEECHH-HHHHHHHHHHHT-TCTTTEEEEESC
T ss_pred HHHHHHHHHHhhhhcCCCEEEEecCcccH--HHHHHHHc---CCCEEEEEEcHH-HHHHHHHHHHHc-CCCCcEEEEECc
Confidence 44445555443 367899999999997 66666542 346999999998 999999999999 985 9999999
Q ss_pred hHHHhcCC-CCccEEEEeCC-----CcccHHHHHHh-ccCCCceEEEE
Q 027409 104 AEEVMGEL-KGVDFLVVDCT-----SKDFARVLRFA-RFSNKGAVLAF 144 (223)
Q Consensus 104 A~evL~~L-~~fDfVFIDa~-----K~~Y~~~f~~~-~~l~~GgvIV~ 144 (223)
+.+. .+ ++||+|+.+.- .+.+.+.+..+ +.|+|||+++.
T Consensus 216 ~~~~--~~~~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 216 VEEV--SLPEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp TTTC--CCSSCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred hhhC--ccCCCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 9873 22 47999998653 23445555544 56799999983
No 199
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.88 E-value=7.1e-09 Score=92.02 Aligned_cols=100 Identities=12% Similarity=0.092 Sum_probs=77.3
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCCCCccEE
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGELKGVDFL 117 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L~~fDfV 117 (223)
.+..+|||||||+|. .++.++... ++.+++.+|+ ++.++.|++++++. |+. |+++.||+.+.++ ..||+|
T Consensus 182 ~~~~~vLDvG~G~G~--~~~~l~~~~--~~~~~~~~D~-~~~~~~a~~~~~~~-~~~~~v~~~~~d~~~~~~--~~~D~v 253 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGG--FAAAIARRA--PHVSATVLEM-AGTVDTARSYLKDE-GLSDRVDVVEGDFFEPLP--RKADAI 253 (360)
T ss_dssp TTCSEEEEETCTTSH--HHHHHHHHC--TTCEEEEEEC-TTHHHHHHHHHHHT-TCTTTEEEEECCTTSCCS--SCEEEE
T ss_pred ccCcEEEEeCCcCcH--HHHHHHHhC--CCCEEEEecC-HHHHHHHHHHHHhc-CCCCceEEEeCCCCCCCC--CCccEE
Confidence 457899999999998 666776543 4678999999 99999999999998 886 9999999986444 259999
Q ss_pred EEeCCCcc-----cHHHHHHh-ccCCCceEE-EEeCC
Q 027409 118 VVDCTSKD-----FARVLRFA-RFSNKGAVL-AFKNA 147 (223)
Q Consensus 118 FIDa~K~~-----Y~~~f~~~-~~l~~GgvI-V~DNv 147 (223)
++..--.+ ...+++.+ +.++|||.+ +.|.+
T Consensus 254 ~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 254 ILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 98654333 24667655 567899955 46666
No 200
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.87 E-value=1.2e-08 Score=88.00 Aligned_cols=102 Identities=12% Similarity=-0.010 Sum_probs=72.5
Q ss_pred hcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHh--cCC-CCcc
Q 027409 39 GWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVM--GEL-KGVD 115 (223)
Q Consensus 39 ~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL--~~L-~~fD 115 (223)
...-.+||++|||+|+ .+..+|... .++|+|+.+|.++.+++...+.-++. -.|+++.|||.+.. ..+ +.||
T Consensus 74 l~~g~~VLDlG~GtG~--~t~~la~~v-~~~G~V~avD~s~~~l~~l~~~a~~r--~nv~~i~~Da~~~~~~~~~~~~~D 148 (232)
T 3id6_C 74 IRKGTKVLYLGAASGT--TISHVSDII-ELNGKAYGVEFSPRVVRELLLVAQRR--PNIFPLLADARFPQSYKSVVENVD 148 (232)
T ss_dssp CCTTCEEEEETCTTSH--HHHHHHHHH-TTTSEEEEEECCHHHHHHHHHHHHHC--TTEEEEECCTTCGGGTTTTCCCEE
T ss_pred CCCCCEEEEEeecCCH--HHHHHHHHh-CCCCEEEEEECcHHHHHHHHHHhhhc--CCeEEEEcccccchhhhccccceE
Confidence 3456799999999998 676777544 44789999999999865444332221 12899999997632 223 4899
Q ss_pred EEEEeCCCcccHHHH-HHhc-cCCCceEEEEe
Q 027409 116 FLVVDCTSKDFARVL-RFAR-FSNKGAVLAFK 145 (223)
Q Consensus 116 fVFIDa~K~~Y~~~f-~~~~-~l~~GgvIV~D 145 (223)
+||.|+....-.+.+ ..+. .|+|||.+++-
T Consensus 149 ~I~~d~a~~~~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 149 VLYVDIAQPDQTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp EEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEecCCChhHHHHHHHHHHHhCCCCeEEEEE
Confidence 999998765444444 4454 78999998865
No 201
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.86 E-value=6.5e-09 Score=88.99 Aligned_cols=99 Identities=10% Similarity=-0.021 Sum_probs=75.2
Q ss_pred HHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCCCCcc
Q 027409 36 MAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGELKGVD 115 (223)
Q Consensus 36 L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L~~fD 115 (223)
.+......+|||||||+|. .+..++. ++++++.+|+++++++.|++++.. ++++.+|+.+ ++--+.||
T Consensus 52 ~l~~~~~~~vLDiGcG~G~--~~~~l~~----~~~~v~gvD~s~~~~~~a~~~~~~-----~~~~~~d~~~-~~~~~~fD 119 (279)
T 3ccf_A 52 LLNPQPGEFILDLGCGTGQ--LTEKIAQ----SGAEVLGTDNAATMIEKARQNYPH-----LHFDVADARN-FRVDKPLD 119 (279)
T ss_dssp HHCCCTTCEEEEETCTTSH--HHHHHHH----TTCEEEEEESCHHHHHHHHHHCTT-----SCEEECCTTT-CCCSSCEE
T ss_pred HhCCCCCCEEEEecCCCCH--HHHHHHh----CCCeEEEEECCHHHHHHHHhhCCC-----CEEEECChhh-CCcCCCcC
Confidence 3445677899999999998 6767764 468999999999999999987622 5889999977 34224799
Q ss_pred EEEEeCCC---cccHHHHHHh-ccCCCceEEEEeC
Q 027409 116 FLVVDCTS---KDFARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 116 fVFIDa~K---~~Y~~~f~~~-~~l~~GgvIV~DN 146 (223)
+|+....- .+...++..+ +.|+|||.+++..
T Consensus 120 ~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~ 154 (279)
T 3ccf_A 120 AVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEF 154 (279)
T ss_dssp EEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEe
Confidence 99987653 2345677644 6779999988753
No 202
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.86 E-value=2.1e-08 Score=89.39 Aligned_cols=102 Identities=9% Similarity=-0.093 Sum_probs=78.9
Q ss_pred hcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCCCCccE
Q 027409 39 GWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGELKGVDF 116 (223)
Q Consensus 39 ~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L~~fDf 116 (223)
..+.++|||||||+|. .+..++... ++.+++.+|+ ++.++.|++++++. |+. |+++.||+.+. .+..+|+
T Consensus 188 ~~~~~~vLDvG~G~G~--~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~~~~~-~~~~~v~~~~~d~~~~--~~~~~D~ 259 (359)
T 1x19_A 188 LDGVKKMIDVGGGIGD--ISAAMLKHF--PELDSTILNL-PGAIDLVNENAAEK-GVADRMRGIAVDIYKE--SYPEADA 259 (359)
T ss_dssp CTTCCEEEEESCTTCH--HHHHHHHHC--TTCEEEEEEC-GGGHHHHHHHHHHT-TCTTTEEEEECCTTTS--CCCCCSE
T ss_pred CCCCCEEEEECCcccH--HHHHHHHHC--CCCeEEEEec-HHHHHHHHHHHHhc-CCCCCEEEEeCccccC--CCCCCCE
Confidence 3467899999999998 777777543 4679999999 99999999999998 886 99999999874 3345699
Q ss_pred EEEeCCCcc-----cHHHHHHh-ccCCCceEE-EEeCCC
Q 027409 117 LVVDCTSKD-----FARVLRFA-RFSNKGAVL-AFKNAF 148 (223)
Q Consensus 117 VFIDa~K~~-----Y~~~f~~~-~~l~~GgvI-V~DNvl 148 (223)
|++-.--.+ ..++++.+ +.++|||.+ |.|.+.
T Consensus 260 v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~ 298 (359)
T 1x19_A 260 VLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVI 298 (359)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECC
T ss_pred EEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 998654333 45567655 567999977 566444
No 203
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.86 E-value=4.7e-09 Score=87.88 Aligned_cols=97 Identities=13% Similarity=-0.045 Sum_probs=73.9
Q ss_pred hcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCCCCccEEE
Q 027409 39 GWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGELKGVDFLV 118 (223)
Q Consensus 39 ~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L~~fDfVF 118 (223)
...+.+|||||||+|. .+..++... ++++++.+|+++++++.|+++.. .++++.+|+.+.. .-+.||+|+
T Consensus 31 ~~~~~~vLdiG~G~G~--~~~~l~~~~--~~~~v~~~D~s~~~~~~a~~~~~-----~~~~~~~d~~~~~-~~~~fD~v~ 100 (259)
T 2p35_A 31 LERVLNGYDLGCGPGN--STELLTDRY--GVNVITGIDSDDDMLEKAADRLP-----NTNFGKADLATWK-PAQKADLLY 100 (259)
T ss_dssp CSCCSSEEEETCTTTH--HHHHHHHHH--CTTSEEEEESCHHHHHHHHHHST-----TSEEEECCTTTCC-CSSCEEEEE
T ss_pred CCCCCEEEEecCcCCH--HHHHHHHhC--CCCEEEEEECCHHHHHHHHHhCC-----CcEEEECChhhcC-ccCCcCEEE
Confidence 4567899999999998 676776543 36789999999999999998822 2689999998743 224799999
Q ss_pred EeCCCc---ccHHHHHHh-ccCCCceEEEEe
Q 027409 119 VDCTSK---DFARVLRFA-RFSNKGAVLAFK 145 (223)
Q Consensus 119 IDa~K~---~Y~~~f~~~-~~l~~GgvIV~D 145 (223)
....-. +...++..+ +.|+|||.+++-
T Consensus 101 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 131 (259)
T 2p35_A 101 ANAVFQWVPDHLAVLSQLMDQLESGGVLAVQ 131 (259)
T ss_dssp EESCGGGSTTHHHHHHHHGGGEEEEEEEEEE
T ss_pred EeCchhhCCCHHHHHHHHHHhcCCCeEEEEE
Confidence 976433 446677655 677999988874
No 204
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.86 E-value=1.5e-08 Score=83.68 Aligned_cols=109 Identities=7% Similarity=0.032 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHh-cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHH
Q 027409 28 GVAELLSAMAAG-WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEE 106 (223)
Q Consensus 28 ~~g~fL~~L~~~-~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~e 106 (223)
....++.++... .+..+|||||||+|. .+..++.. +.+++.+|+++++++.|++++.+ ++++.+|+.+
T Consensus 26 ~~~~~~~~l~~~~~~~~~vLdiG~G~G~--~~~~l~~~----~~~v~~~D~s~~~~~~a~~~~~~-----~~~~~~d~~~ 94 (239)
T 3bxo_A 26 EASDIADLVRSRTPEASSLLDVACGTGT--HLEHFTKE----FGDTAGLELSEDMLTHARKRLPD-----ATLHQGDMRD 94 (239)
T ss_dssp HHHHHHHHHHHHCTTCCEEEEETCTTSH--HHHHHHHH----HSEEEEEESCHHHHHHHHHHCTT-----CEEEECCTTT
T ss_pred HHHHHHHHHHHhcCCCCeEEEecccCCH--HHHHHHHh----CCcEEEEeCCHHHHHHHHHhCCC-----CEEEECCHHH
Confidence 334444555443 467899999999998 66677654 23899999999999999987532 6899999976
Q ss_pred HhcCCCCccEEEEeCC-------CcccHHHHHHh-ccCCCceEEEEeCCC
Q 027409 107 VMGELKGVDFLVVDCT-------SKDFARVLRFA-RFSNKGAVLAFKNAF 148 (223)
Q Consensus 107 vL~~L~~fDfVFIDa~-------K~~Y~~~f~~~-~~l~~GgvIV~DNvl 148 (223)
. +.-+.||+|+.-.+ .++...+++.+ +.++|||.++++...
T Consensus 95 ~-~~~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 143 (239)
T 3bxo_A 95 F-RLGRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWW 143 (239)
T ss_dssp C-CCSSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCC
T ss_pred c-ccCCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecc
Confidence 3 22247999995332 23445677655 667999999998643
No 205
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.86 E-value=1e-08 Score=85.00 Aligned_cols=105 Identities=9% Similarity=-0.066 Sum_probs=76.1
Q ss_pred HHHHHHHh-cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcC
Q 027409 32 LLSAMAAG-WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGE 110 (223)
Q Consensus 32 fL~~L~~~-~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~ 110 (223)
++..+... ....+|||||||+|. .+.+++.. +.+++.+|+++++++.|+++.. ...++++.+|+.+. +-
T Consensus 43 ~~~~l~~~~~~~~~vLDiG~G~G~--~~~~l~~~----~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~-~~ 112 (242)
T 3l8d_A 43 IIPFFEQYVKKEAEVLDVGCGDGY--GTYKLSRT----GYKAVGVDISEVMIQKGKERGE---GPDLSFIKGDLSSL-PF 112 (242)
T ss_dssp HHHHHHHHSCTTCEEEEETCTTSH--HHHHHHHT----TCEEEEEESCHHHHHHHHTTTC---BTTEEEEECBTTBC-SS
T ss_pred HHHHHHHHcCCCCeEEEEcCCCCH--HHHHHHHc----CCeEEEEECCHHHHHHHHhhcc---cCCceEEEcchhcC-CC
Confidence 34444443 367799999999998 66677643 6799999999999999988742 22389999999863 32
Q ss_pred -CCCccEEEEeCCCc---ccHHHHHHh-ccCCCceEEEEeC
Q 027409 111 -LKGVDFLVVDCTSK---DFARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 111 -L~~fDfVFIDa~K~---~Y~~~f~~~-~~l~~GgvIV~DN 146 (223)
-+.||+|+.-..-. +...++..+ +.++|||.++.-.
T Consensus 113 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 153 (242)
T 3l8d_A 113 ENEQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAI 153 (242)
T ss_dssp CTTCEEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCccEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEE
Confidence 24799999876433 345677654 6679999887754
No 206
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.85 E-value=2.2e-09 Score=90.05 Aligned_cols=103 Identities=11% Similarity=0.047 Sum_probs=76.5
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCc------------------------
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGW------------------------ 95 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~------------------------ 95 (223)
.+.++|||||||+|. .++.++. ... .+++.+|.++++++.|+++++.. +.
T Consensus 55 ~~~~~vLDlGcG~G~--~~~~l~~--~~~-~~v~gvD~s~~~l~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (265)
T 2i62_A 55 VKGELLIDIGSGPTI--YQLLSAC--ESF-TEIIVSDYTDQNLWELQKWLKKE-PGAFDWSPVVTYVCDLEGNRMKGPEK 128 (265)
T ss_dssp CCEEEEEEESCTTCC--GGGTTGG--GTE-EEEEEEESCHHHHHHHHHHHTTC-TTCCCCHHHHHHHHHHTTTCSCHHHH
T ss_pred cCCCEEEEECCCccH--HHHHHhh--ccc-CeEEEecCCHHHHHHHHHHHhcC-CccccchhhhhhhhcccccccchHHH
Confidence 456799999999998 5655542 111 48999999999999999998765 41
Q ss_pred ----e--E-EEEecchHHHhc--CC--CCccEEEEeCCCc-------ccHHHHHHh-ccCCCceEEEEeCCC
Q 027409 96 ----V--S-EVIVRQAEEVMG--EL--KGVDFLVVDCTSK-------DFARVLRFA-RFSNKGAVLAFKNAF 148 (223)
Q Consensus 96 ----~--I-~li~GdA~evL~--~L--~~fDfVFIDa~K~-------~Y~~~f~~~-~~l~~GgvIV~DNvl 148 (223)
. | +++.+|+.+..+ .. +.||+|+.-..-. ++..++..+ +.|+|||.++....+
T Consensus 129 ~~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 200 (265)
T 2i62_A 129 EEKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDAL 200 (265)
T ss_dssp HHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred HHHhhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecC
Confidence 1 7 999999987543 22 4799999865433 566777654 677999998886644
No 207
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.84 E-value=5.2e-09 Score=84.72 Aligned_cols=107 Identities=10% Similarity=-0.028 Sum_probs=76.5
Q ss_pred HHHHHHHh-cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcC
Q 027409 32 LLSAMAAG-WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGE 110 (223)
Q Consensus 32 fL~~L~~~-~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~ 110 (223)
+...|.+. ....+|||||||.|. .++.++.. .. .+++.+|+++++++.|+++++.. . .++++.+|+.+. +-
T Consensus 32 ~~~~l~~~~~~~~~vLdiGcG~G~--~~~~l~~~--~~-~~v~~~D~s~~~~~~a~~~~~~~-~-~i~~~~~d~~~~-~~ 103 (215)
T 2pxx_A 32 FRALLEPELRPEDRILVLGCGNSA--LSYELFLG--GF-PNVTSVDYSSVVVAAMQACYAHV-P-QLRWETMDVRKL-DF 103 (215)
T ss_dssp HHHHHGGGCCTTCCEEEETCTTCS--HHHHHHHT--TC-CCEEEEESCHHHHHHHHHHTTTC-T-TCEEEECCTTSC-CS
T ss_pred HHHHHHHhcCCCCeEEEECCCCcH--HHHHHHHc--CC-CcEEEEeCCHHHHHHHHHhcccC-C-CcEEEEcchhcC-CC
Confidence 55555544 456799999999998 67677643 11 28999999999999999998653 1 289999999774 31
Q ss_pred -CCCccEEEEeCC------------------CcccHHHHHHh-ccCCCceEEEEeC
Q 027409 111 -LKGVDFLVVDCT------------------SKDFARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 111 -L~~fDfVFIDa~------------------K~~Y~~~f~~~-~~l~~GgvIV~DN 146 (223)
-+.||+|+.... ..+...+++.+ +.++|||.++.-.
T Consensus 104 ~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 159 (215)
T 2pxx_A 104 PSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMT 159 (215)
T ss_dssp CSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEe
Confidence 147999996532 22446677644 6679999887743
No 208
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.84 E-value=6.2e-09 Score=91.21 Aligned_cols=109 Identities=12% Similarity=-0.086 Sum_probs=74.5
Q ss_pred HHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHH
Q 027409 28 GVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEV 107 (223)
Q Consensus 28 ~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~ev 107 (223)
+..+.+..++......+|||||||+|. .+++||.. +++|+.||.++++++.|+++++.. .+.+++...+. +.
T Consensus 32 ~~~~~il~~l~l~~g~~VLDlGcGtG~--~a~~La~~----g~~V~gvD~S~~ml~~Ar~~~~~~-~v~~~~~~~~~-~~ 103 (261)
T 3iv6_A 32 SDRENDIFLENIVPGSTVAVIGASTRF--LIEKALER----GASVTVFDFSQRMCDDLAEALADR-CVTIDLLDITA-EI 103 (261)
T ss_dssp CHHHHHHHTTTCCTTCEEEEECTTCHH--HHHHHHHT----TCEEEEEESCHHHHHHHHHHTSSS-CCEEEECCTTS-CC
T ss_pred HHHHHHHHhcCCCCcCEEEEEeCcchH--HHHHHHhc----CCEEEEEECCHHHHHHHHHHHHhc-cceeeeeeccc-cc
Confidence 333444444455667899999999998 77788642 579999999999999999998776 44444443332 00
Q ss_pred hcCC-CCccEEEEeCCCcc-----cHHHHHH-hccCCCceEEEEe
Q 027409 108 MGEL-KGVDFLVVDCTSKD-----FARVLRF-ARFSNKGAVLAFK 145 (223)
Q Consensus 108 L~~L-~~fDfVFIDa~K~~-----Y~~~f~~-~~~l~~GgvIV~D 145 (223)
...+ ++||+|+.+..-.+ ....+.. .+.+ |||.++.-
T Consensus 104 ~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS 147 (261)
T 3iv6_A 104 PKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRAS 147 (261)
T ss_dssp CGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred ccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEE
Confidence 1122 47999999975433 3445553 3677 99988764
No 209
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.84 E-value=6.1e-09 Score=88.64 Aligned_cols=109 Identities=14% Similarity=0.074 Sum_probs=79.6
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecc
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQ 103 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~Gd 103 (223)
...+...+.|..++...++++|||||||+|. .++.++. ++++++.+|+++++++.|+++. .++++.+|
T Consensus 17 ~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~--~~~~l~~----~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~d 84 (261)
T 3ege_A 17 VPDIRIVNAIINLLNLPKGSVIADIGAGTGG--YSVALAN----QGLFVYAVEPSIVMRQQAVVHP------QVEWFTGY 84 (261)
T ss_dssp CCCHHHHHHHHHHHCCCTTCEEEEETCTTSH--HHHHHHT----TTCEEEEECSCHHHHHSSCCCT------TEEEECCC
T ss_pred cccHHHHHHHHHHhCCCCCCEEEEEcCcccH--HHHHHHh----CCCEEEEEeCCHHHHHHHHhcc------CCEEEECc
Confidence 3455566666666666788999999999998 7767753 4689999999998877765543 38999999
Q ss_pred hHHHhcCC-CCccEEEEeCCC---cccHHHHHHh-ccCCCce-EEEEeC
Q 027409 104 AEEVMGEL-KGVDFLVVDCTS---KDFARVLRFA-RFSNKGA-VLAFKN 146 (223)
Q Consensus 104 A~evL~~L-~~fDfVFIDa~K---~~Y~~~f~~~-~~l~~Gg-vIV~DN 146 (223)
+.+ ++-- +.||+|+.-..- .+...++..+ +.|+ || +++.+-
T Consensus 85 ~~~-~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~ 131 (261)
T 3ege_A 85 AEN-LALPDKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTF 131 (261)
T ss_dssp TTS-CCSCTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEE
T ss_pred hhh-CCCCCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEc
Confidence 976 4422 479999998754 3446677644 6779 99 555553
No 210
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.84 E-value=1.2e-08 Score=91.30 Aligned_cols=105 Identities=14% Similarity=0.151 Sum_probs=80.0
Q ss_pred HhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhh-cC---ce-EEEEecchHHHhcCC-
Q 027409 38 AGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDV-VG---WV-SEVIVRQAEEVMGEL- 111 (223)
Q Consensus 38 ~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a-~G---~~-I~li~GdA~evL~~L- 111 (223)
..-+||+||-||-|.|. .+=.++ ..++..+|+.+|+|++.++.||++|... .| .. ++++.+||.+.|.+-
T Consensus 80 ~~p~pk~VLIiGgGdG~--~~revl--k~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~ 155 (294)
T 3o4f_A 80 AHGHAKHVLIIGGGDGA--MLREVT--RHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTS 155 (294)
T ss_dssp HSSCCCEEEEESCTTSH--HHHHHH--TCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSS
T ss_pred hCCCCCeEEEECCCchH--HHHHHH--HcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhcc
Confidence 34689999999999884 222232 1234568999999999999999998642 12 22 999999999999876
Q ss_pred CCccEEEEeCCCc------cc-HHHHHHh-ccCCCceEEEEeC
Q 027409 112 KGVDFLVVDCTSK------DF-ARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 112 ~~fDfVFIDa~K~------~Y-~~~f~~~-~~l~~GgvIV~DN 146 (223)
+.||.|++|+--. .| .+||+.+ +.|+|||++++-.
T Consensus 156 ~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 156 QTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp CCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEE
T ss_pred ccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEec
Confidence 4899999997432 23 6788877 5679999999853
No 211
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.84 E-value=2.3e-09 Score=93.37 Aligned_cols=85 Identities=15% Similarity=0.004 Sum_probs=69.1
Q ss_pred HHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCc-------hHHHHHHHHHHhhcCce--EEEE
Q 027409 30 AELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDE-------RSRLAYVKAMYDVVGWV--SEVI 100 (223)
Q Consensus 30 g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~-------e~~~~Ar~~~~~a~G~~--I~li 100 (223)
.++|...+...+..+|||+|||+|. .+++||.. +++|+.+|+++ +.++.|++|.+.. |+. |+++
T Consensus 72 ~~~l~~a~~~~~~~~VLDlgcG~G~--~a~~lA~~----g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~-~~~~ri~~~ 144 (258)
T 2r6z_A 72 GELIAKAVNHTAHPTVWDATAGLGR--DSFVLASL----GLTVTAFEQHPAVACLLSDGIRRALLNPETQ-DTAARINLH 144 (258)
T ss_dssp -CHHHHHTTGGGCCCEEETTCTTCH--HHHHHHHT----TCCEEEEECCHHHHHHHHHHHHHHHHSHHHH-HHHTTEEEE
T ss_pred hHHHHHHhCcCCcCeEEEeeCccCH--HHHHHHHh----CCEEEEEECChhhhHHHHHHHHHHHhHHHhh-CCccCeEEE
Confidence 3444444444455799999999998 78888752 57999999999 9999999999887 774 9999
Q ss_pred ecchHHHhcCC----CCccEEEEeC
Q 027409 101 VRQAEEVMGEL----KGVDFLVVDC 121 (223)
Q Consensus 101 ~GdA~evL~~L----~~fDfVFIDa 121 (223)
.||+.+.++.+ +.||+|++|.
T Consensus 145 ~~d~~~~l~~~~~~~~~fD~V~~dP 169 (258)
T 2r6z_A 145 FGNAAEQMPALVKTQGKPDIVYLDP 169 (258)
T ss_dssp ESCHHHHHHHHHHHHCCCSEEEECC
T ss_pred ECCHHHHHHhhhccCCCccEEEECC
Confidence 99999988755 4799999996
No 212
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.83 E-value=5.1e-09 Score=91.70 Aligned_cols=84 Identities=11% Similarity=-0.009 Sum_probs=68.5
Q ss_pred HHHHHHHHhcCC--CeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcC--------c-e-EE
Q 027409 31 ELLSAMAAGWNA--KLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVG--------W-V-SE 98 (223)
Q Consensus 31 ~fL~~L~~~~~a--k~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G--------~-~-I~ 98 (223)
+.|...+...+. .+||++|||+|. .++++|.. +++||.+|++++.++.++++++++ . + . |+
T Consensus 76 e~l~~al~l~~g~~~~VLDl~~G~G~--dal~lA~~----g~~V~~vE~~~~~~~l~~~~l~~a-~~~~~~~~~l~~~i~ 148 (258)
T 2oyr_A 76 EAVAKAVGIKGDYLPDVVDATAGLGR--DAFVLASV----GCRVRMLERNPVVAALLDDGLARG-YADAEIGGWLQERLQ 148 (258)
T ss_dssp SHHHHHTTCBTTBCCCEEETTCTTCH--HHHHHHHH----TCCEEEEECCHHHHHHHHHHHHHH-HHCTTTHHHHHHHEE
T ss_pred HHHHHHhcccCCCCCEEEEcCCcCCH--HHHHHHHc----CCEEEEEECCHHHHHHHHHHHHHH-HhhHhhhhhhhcCEE
Confidence 334444444455 799999999998 88888753 678999999999999999998765 3 4 3 99
Q ss_pred EEecchHHHhcCC-CCccEEEEeC
Q 027409 99 VIVRQAEEVMGEL-KGVDFLVVDC 121 (223)
Q Consensus 99 li~GdA~evL~~L-~~fDfVFIDa 121 (223)
++.||+.+.|+.+ +.||+||+|-
T Consensus 149 ~~~~D~~~~L~~~~~~fDvV~lDP 172 (258)
T 2oyr_A 149 LIHASSLTALTDITPRPQVVYLDP 172 (258)
T ss_dssp EEESCHHHHSTTCSSCCSEEEECC
T ss_pred EEECCHHHHHHhCcccCCEEEEcC
Confidence 9999999999887 4799999997
No 213
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.83 E-value=1.2e-08 Score=82.02 Aligned_cols=79 Identities=14% Similarity=0.087 Sum_probs=60.4
Q ss_pred CcHHHHHHHHHHHHh--cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEec
Q 027409 25 KESGVAELLSAMAAG--WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVR 102 (223)
Q Consensus 25 i~p~~g~fL~~L~~~--~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~G 102 (223)
-.|++..++.. +.. .+.++|||+|||+|+ .+++++.. . +++.+|+++++++. . . .++++.|
T Consensus 6 P~~~~~~l~~~-l~~~~~~~~~vLD~GcG~G~--~~~~l~~~----~-~v~gvD~s~~~~~~-------~-~-~~~~~~~ 68 (170)
T 3q87_B 6 PGEDTYTLMDA-LEREGLEMKIVLDLGTSTGV--ITEQLRKR----N-TVVSTDLNIRALES-------H-R-GGNLVRA 68 (170)
T ss_dssp CCHHHHHHHHH-HHHHTCCSCEEEEETCTTCH--HHHHHTTT----S-EEEEEESCHHHHHT-------C-S-SSCEEEC
T ss_pred cCccHHHHHHH-HHhhcCCCCeEEEeccCccH--HHHHHHhc----C-cEEEEECCHHHHhc-------c-c-CCeEEEC
Confidence 35667777777 444 678899999999998 77666432 3 99999999998877 2 1 2789999
Q ss_pred chHHHhcCCCCccEEEEeC
Q 027409 103 QAEEVMGELKGVDFLVVDC 121 (223)
Q Consensus 103 dA~evL~~L~~fDfVFIDa 121 (223)
|+.+.++. +.||+|+.+.
T Consensus 69 d~~~~~~~-~~fD~i~~n~ 86 (170)
T 3q87_B 69 DLLCSINQ-ESVDVVVFNP 86 (170)
T ss_dssp STTTTBCG-GGCSEEEECC
T ss_pred Chhhhccc-CCCCEEEECC
Confidence 99885443 5899999975
No 214
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.82 E-value=2.3e-08 Score=87.18 Aligned_cols=100 Identities=12% Similarity=0.065 Sum_probs=75.0
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcC-------c-eEEEEecchHHHh----
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVG-------W-VSEVIVRQAEEVM---- 108 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G-------~-~I~li~GdA~evL---- 108 (223)
++.+|||||||+|. .+..++. ...++++.+|+++++++.|++.+... + . .++++.+|+.+..
T Consensus 34 ~~~~VLDlGcG~G~--~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~ 107 (313)
T 3bgv_A 34 RDITVLDLGCGKGG--DLLKWKK---GRINKLVCTDIADVSVKQCQQRYEDM-KNRRDSEYIFSAEFITADSSKELLIDK 107 (313)
T ss_dssp -CCEEEEETCTTTT--THHHHHH---TTCSEEEEEESCHHHHHHHHHHHHHH-HSSSCC-CCCEEEEEECCTTTSCSTTT
T ss_pred CCCEEEEECCCCcH--HHHHHHh---cCCCEEEEEeCCHHHHHHHHHHHHHh-hhcccccccceEEEEEecccccchhhh
Confidence 67899999999998 5656653 23679999999999999999998864 3 1 3999999998752
Q ss_pred -cC-CCCccEEEEeCCC-------cccHHHHHHh-ccCCCceEEEEeC
Q 027409 109 -GE-LKGVDFLVVDCTS-------KDFARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 109 -~~-L~~fDfVFIDa~K-------~~Y~~~f~~~-~~l~~GgvIV~DN 146 (223)
+. -+.||+|+.-..- .+...+|..+ +.|+|||++++.-
T Consensus 108 ~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (313)
T 3bgv_A 108 FRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTT 155 (313)
T ss_dssp CSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred cccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 21 1379999987533 2234677655 6679999998764
No 215
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.82 E-value=1.6e-08 Score=88.90 Aligned_cols=99 Identities=12% Similarity=0.043 Sum_probs=76.4
Q ss_pred CeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCCCCccEEEEe
Q 027409 43 KLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGELKGVDFLVVD 120 (223)
Q Consensus 43 k~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L~~fDfVFID 120 (223)
++|||||||+|. .+..++... ++.+++.+|+ ++.++.|++++++. |+. |+++.||..+-++ +.||+||+-
T Consensus 169 ~~vlDvG~G~G~--~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~~~~~-~~~~~v~~~~~d~~~~~~--~~~D~v~~~ 240 (334)
T 2ip2_A 169 RSFVDVGGGSGE--LTKAILQAE--PSARGVMLDR-EGSLGVARDNLSSL-LAGERVSLVGGDMLQEVP--SNGDIYLLS 240 (334)
T ss_dssp CEEEEETCTTCH--HHHHHHHHC--TTCEEEEEEC-TTCTHHHHHHTHHH-HHTTSEEEEESCTTTCCC--SSCSEEEEE
T ss_pred CEEEEeCCCchH--HHHHHHHHC--CCCEEEEeCc-HHHHHHHHHHHhhc-CCCCcEEEecCCCCCCCC--CCCCEEEEc
Confidence 899999999998 676776543 4679999999 99999999999988 775 9999999987433 479999987
Q ss_pred CCCccc-----HHHHHHh-ccCCCceEEEE-eCCCC
Q 027409 121 CTSKDF-----ARVLRFA-RFSNKGAVLAF-KNAFQ 149 (223)
Q Consensus 121 a~K~~Y-----~~~f~~~-~~l~~GgvIV~-DNvl~ 149 (223)
.--.++ ..++..+ +.++|||.++. |.++.
T Consensus 241 ~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 276 (334)
T 2ip2_A 241 RIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTIS 276 (334)
T ss_dssp SCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred hhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 654333 4667655 56788886655 44443
No 216
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.82 E-value=1.7e-08 Score=89.27 Aligned_cols=102 Identities=11% Similarity=0.042 Sum_probs=77.9
Q ss_pred CCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCC-CCccEEE
Q 027409 42 AKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGEL-KGVDFLV 118 (223)
Q Consensus 42 ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L-~~fDfVF 118 (223)
+++|||||||+|. .+..++... ++.+++.+|. ++.++.|++++++. ++. |+++.||..+.-+.. ++||+|+
T Consensus 180 ~~~vlDvG~G~G~--~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~~~~~-~~~~~v~~~~~d~~~~~~~~~~~~D~v~ 253 (352)
T 3mcz_A 180 ARTVIDLAGGHGT--YLAQVLRRH--PQLTGQIWDL-PTTRDAARKTIHAH-DLGGRVEFFEKNLLDARNFEGGAADVVM 253 (352)
T ss_dssp CCEEEEETCTTCH--HHHHHHHHC--TTCEEEEEEC-GGGHHHHHHHHHHT-TCGGGEEEEECCTTCGGGGTTCCEEEEE
T ss_pred CCEEEEeCCCcCH--HHHHHHHhC--CCCeEEEEEC-HHHHHHHHHHHHhc-CCCCceEEEeCCcccCcccCCCCccEEE
Confidence 8899999999998 777777543 4689999999 89999999999998 886 999999998753212 4699999
Q ss_pred EeCC-----CcccHHHHHHh-ccCCCceEEEE-eCCCC
Q 027409 119 VDCT-----SKDFARVLRFA-RFSNKGAVLAF-KNAFQ 149 (223)
Q Consensus 119 IDa~-----K~~Y~~~f~~~-~~l~~GgvIV~-DNvl~ 149 (223)
+-.- .++...++..+ +.++|||.++. |.++.
T Consensus 254 ~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 291 (352)
T 3mcz_A 254 LNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMN 291 (352)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCC
T ss_pred EecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 8543 33446677655 56788886655 44543
No 217
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.81 E-value=8e-09 Score=91.20 Aligned_cols=90 Identities=17% Similarity=0.148 Sum_probs=70.5
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEec
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVR 102 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~G 102 (223)
.++|...+.+...+......+|||||||+|+ .+..|+. .+++|+.+|+|+++++.|+++++.. |+. ++++.|
T Consensus 25 l~~~~i~~~i~~~~~~~~~~~VLDiG~G~G~--lt~~La~----~~~~v~~vDi~~~~~~~a~~~~~~~-~~~~v~~~~~ 97 (299)
T 2h1r_A 25 LKNPGILDKIIYAAKIKSSDIVLEIGCGTGN--LTVKLLP----LAKKVITIDIDSRMISEVKKRCLYE-GYNNLEVYEG 97 (299)
T ss_dssp ECCHHHHHHHHHHHCCCTTCEEEEECCTTST--THHHHTT----TSSEEEEECSCHHHHHHHHHHHHHT-TCCCEEC---
T ss_pred ecCHHHHHHHHHhcCCCCcCEEEEEcCcCcH--HHHHHHh----cCCEEEEEECCHHHHHHHHHHHHHc-CCCceEEEEC
Confidence 5677777777766766778899999999998 7767653 2579999999999999999999988 877 999999
Q ss_pred chHHHhcCCCCccEEEEeCC
Q 027409 103 QAEEVMGELKGVDFLVVDCT 122 (223)
Q Consensus 103 dA~evL~~L~~fDfVFIDa~ 122 (223)
|+.+.- +..||.|+.|.-
T Consensus 98 D~~~~~--~~~~D~Vv~n~p 115 (299)
T 2h1r_A 98 DAIKTV--FPKFDVCTANIP 115 (299)
T ss_dssp -CCSSC--CCCCSEEEEECC
T ss_pred chhhCC--cccCCEEEEcCC
Confidence 998742 347999999864
No 218
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.81 E-value=1.9e-08 Score=91.14 Aligned_cols=106 Identities=10% Similarity=0.087 Sum_probs=80.0
Q ss_pred hcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhc----C-c--e-EEEEecchHHHhc-
Q 027409 39 GWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVV----G-W--V-SEVIVRQAEEVMG- 109 (223)
Q Consensus 39 ~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~----G-~--~-I~li~GdA~evL~- 109 (223)
.....+|||||||+|. .++.|+... .++++++.+|+++++++.|++++++.. | + . |+++.||+.+...
T Consensus 81 ~~~~~~VLDlGcG~G~--~~~~la~~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~ 157 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGR--DVYLASKLV-GEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATA 157 (383)
T ss_dssp GGTTCEEEEESCTTSH--HHHHHHHHH-TTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGC
T ss_pred CCCCCEEEEecCccCH--HHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhc
Confidence 4577899999999998 677776543 246899999999999999999987530 2 2 3 9999999987521
Q ss_pred ---CC--CCccEEEEeCCCc---ccHHHHHHh-ccCCCceEEEEeCC
Q 027409 110 ---EL--KGVDFLVVDCTSK---DFARVLRFA-RFSNKGAVLAFKNA 147 (223)
Q Consensus 110 ---~L--~~fDfVFIDa~K~---~Y~~~f~~~-~~l~~GgvIV~DNv 147 (223)
.+ +.||+|+...--. +...++..+ +.|+|||.++.-..
T Consensus 158 ~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~ 204 (383)
T 4fsd_A 158 EPEGVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDV 204 (383)
T ss_dssp BSCCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccCCCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEe
Confidence 22 3799999987432 346777654 67799999888554
No 219
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.79 E-value=4.1e-08 Score=83.49 Aligned_cols=114 Identities=6% Similarity=-0.086 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHh-cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchH
Q 027409 27 SGVAELLSAMAAG-WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAE 105 (223)
Q Consensus 27 p~~g~fL~~L~~~-~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~ 105 (223)
|.--+|....... -.|.+|||+|||+|- .++.++ ...++.+++.+|+|+.+++.|+++++.. |...++...|..
T Consensus 34 p~ld~fY~~~~~~l~~~~~VLDlGCG~Gp--lAl~l~--~~~p~a~~~A~Di~~~~leiar~~~~~~-g~~~~v~~~d~~ 108 (200)
T 3fzg_A 34 ATLNDFYTYVFGNIKHVSSILDFGCGFNP--LALYQW--NENEKIIYHAYDIDRAEIAFLSSIIGKL-KTTIKYRFLNKE 108 (200)
T ss_dssp GGHHHHHHHHHHHSCCCSEEEEETCTTHH--HHHHHH--CSSCCCEEEEECSCHHHHHHHHHHHHHS-CCSSEEEEECCH
T ss_pred HhHHHHHHHHHhhcCCCCeEEEecCCCCH--HHHHHH--hcCCCCEEEEEeCCHHHHHHHHHHHHhc-CCCccEEEeccc
Confidence 6666776665554 569999999999996 555554 3455779999999999999999999998 887333336666
Q ss_pred HHhcCCCCccEEEEeCCCc----ccHHHHHHhccCCCceEEEEeC
Q 027409 106 EVMGELKGVDFLVVDCTSK----DFARVLRFARFSNKGAVLAFKN 146 (223)
Q Consensus 106 evL~~L~~fDfVFIDa~K~----~Y~~~f~~~~~l~~GgvIV~DN 146 (223)
+..+. .+||.|+.=--=. +=...++.+..++|||++|.=.
T Consensus 109 ~~~~~-~~~DvVLa~k~LHlL~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 109 SDVYK-GTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp HHHTT-SEEEEEEEETCHHHHHHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred ccCCC-CCcChhhHhhHHHhhhhhHHHHHHHHHHhCCCCEEEEeC
Confidence 54332 4799998632100 0011224446678899988776
No 220
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.79 E-value=1.1e-08 Score=85.44 Aligned_cols=109 Identities=6% Similarity=-0.143 Sum_probs=77.1
Q ss_pred HHHHHHHHH-hcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHh
Q 027409 30 AELLSAMAA-GWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVM 108 (223)
Q Consensus 30 g~fL~~L~~-~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL 108 (223)
.+.+..+.. .....+|||||||+|+ .+..|+.. +.+++.+|+++++++.|++++.. ..++++.+|+.+.-
T Consensus 44 ~~~~~~~~~~~~~~~~vLD~GcG~G~--~~~~la~~----~~~v~gvD~s~~~~~~a~~~~~~---~~~~~~~~d~~~~~ 114 (245)
T 3ggd_A 44 VVDLPRFELLFNPELPLIDFACGNGT--QTKFLSQF----FPRVIGLDVSKSALEIAAKENTA---ANISYRLLDGLVPE 114 (245)
T ss_dssp HHHHHHHTTTSCTTSCEEEETCTTSH--HHHHHHHH----SSCEEEEESCHHHHHHHHHHSCC---TTEEEEECCTTCHH
T ss_pred HHHHHHHhhccCCCCeEEEEcCCCCH--HHHHHHHh----CCCEEEEECCHHHHHHHHHhCcc---cCceEEECcccccc
Confidence 344444433 3455799999999998 77777754 23899999999999999998732 23899999997632
Q ss_pred cC--C---CCccEEEEeCCCc-----ccHHHHHHh-ccCCCceE-EEEeCC
Q 027409 109 GE--L---KGVDFLVVDCTSK-----DFARVLRFA-RFSNKGAV-LAFKNA 147 (223)
Q Consensus 109 ~~--L---~~fDfVFIDa~K~-----~Y~~~f~~~-~~l~~Ggv-IV~DNv 147 (223)
.. + ..||+|+...--. +...++..+ +.|+|||. +++|..
T Consensus 115 ~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 165 (245)
T 3ggd_A 115 QAAQIHSEIGDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELG 165 (245)
T ss_dssp HHHHHHHHHCSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred cccccccccCccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 21 2 1499999986433 445777755 56799996 666654
No 221
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.77 E-value=1.3e-08 Score=86.38 Aligned_cols=92 Identities=12% Similarity=-0.008 Sum_probs=69.0
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcC-CCCccEEEE
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGE-LKGVDFLVV 119 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~-L~~fDfVFI 119 (223)
.+.+|||||||+|. .+..++.. +.+++.+|+++++++.|+++.. . .++.+|+.+ ++- -+.||+|+.
T Consensus 54 ~~~~vLDiGcG~G~--~~~~l~~~----~~~v~gvD~s~~~l~~a~~~~~-~-----~~~~~d~~~-~~~~~~~fD~v~~ 120 (260)
T 2avn_A 54 NPCRVLDLGGGTGK--WSLFLQER----GFEVVLVDPSKEMLEVAREKGV-K-----NVVEAKAED-LPFPSGAFEAVLA 120 (260)
T ss_dssp SCCEEEEETCTTCH--HHHHHHTT----TCEEEEEESCHHHHHHHHHHTC-S-----CEEECCTTS-CCSCTTCEEEEEE
T ss_pred CCCeEEEeCCCcCH--HHHHHHHc----CCeEEEEeCCHHHHHHHHhhcC-C-----CEEECcHHH-CCCCCCCEEEEEE
Confidence 67899999999998 66666532 5799999999999999998754 2 278899876 332 247999998
Q ss_pred eCCCc----ccHHHHHHh-ccCCCceEEEEe
Q 027409 120 DCTSK----DFARVLRFA-RFSNKGAVLAFK 145 (223)
Q Consensus 120 Da~K~----~Y~~~f~~~-~~l~~GgvIV~D 145 (223)
...-. +...+++.+ +.|+|||.+++.
T Consensus 121 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 151 (260)
T 2avn_A 121 LGDVLSYVENKDKAFSEIRRVLVPDGLLIAT 151 (260)
T ss_dssp CSSHHHHCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred cchhhhccccHHHHHHHHHHHcCCCeEEEEE
Confidence 65322 346667654 677999998864
No 222
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.74 E-value=2.3e-08 Score=84.79 Aligned_cols=108 Identities=10% Similarity=-0.032 Sum_probs=75.9
Q ss_pred CCcHHHHHHHHHHHHh--cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEe
Q 027409 24 IKESGVAELLSAMAAG--WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIV 101 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~--~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~ 101 (223)
...|-...+...+... ....+|||||||.|+ .+..++... ++++++.+|+++++++.|+++..+ ++++.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~--~~~~l~~~~--~~~~v~~vD~s~~~~~~a~~~~~~-----~~~~~ 136 (269)
T 1p91_A 66 HYQPLRDAIVAQLRERLDDKATAVLDIGCGEGY--YTHAFADAL--PEITTFGLDVSKVAIKAAAKRYPQ-----VTFCV 136 (269)
T ss_dssp TTHHHHHHHHHHHHHHSCTTCCEEEEETCTTST--THHHHHHTC--TTSEEEEEESCHHHHHHHHHHCTT-----SEEEE
T ss_pred CcHHHHHHHHHHHHHhcCCCCCEEEEECCCCCH--HHHHHHHhC--CCCeEEEEeCCHHHHHHHHHhCCC-----cEEEE
Confidence 3445455555555554 467899999999998 666776542 467999999999999999886532 58899
Q ss_pred cchHHHhcC-CCCccEEEEeCCCcccHHHHHH-hccCCCceEEEEe
Q 027409 102 RQAEEVMGE-LKGVDFLVVDCTSKDFARVLRF-ARFSNKGAVLAFK 145 (223)
Q Consensus 102 GdA~evL~~-L~~fDfVFIDa~K~~Y~~~f~~-~~~l~~GgvIV~D 145 (223)
+|+.+ ++- -+.||+|+.-... ..++. .+.|+|||.++.-
T Consensus 137 ~d~~~-~~~~~~~fD~v~~~~~~----~~l~~~~~~L~pgG~l~~~ 177 (269)
T 1p91_A 137 ASSHR-LPFSDTSMDAIIRIYAP----CKAEELARVVKPGGWVITA 177 (269)
T ss_dssp CCTTS-CSBCTTCEEEEEEESCC----CCHHHHHHHEEEEEEEEEE
T ss_pred cchhh-CCCCCCceeEEEEeCCh----hhHHHHHHhcCCCcEEEEE
Confidence 99875 332 1479999975443 24543 4667888877653
No 223
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.74 E-value=2.7e-08 Score=85.74 Aligned_cols=103 Identities=15% Similarity=0.054 Sum_probs=71.7
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhh----------------cCc---------
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDV----------------VGW--------- 95 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a----------------~G~--------- 95 (223)
+..+|||||||+|. .++.++ ...+.+|+.+|+++++++.|++++++. .|.
T Consensus 71 ~~~~vLDiGcG~G~--~~~l~~---~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 145 (289)
T 2g72_A 71 SGRTLIDIGSGPTV--YQLLSA---CSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKER 145 (289)
T ss_dssp CCSEEEEETCTTCC--GGGTTG---GGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHH
T ss_pred CCCeEEEECCCcCh--HHHHhh---ccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHH
Confidence 67899999999997 443332 223569999999999999999866531 020
Q ss_pred -----eEEEEecchHHHhc----CC--CCccEEEEeCCC-------cccHHHHHHh-ccCCCceEEEEeCCC
Q 027409 96 -----VSEVIVRQAEEVMG----EL--KGVDFLVVDCTS-------KDFARVLRFA-RFSNKGAVLAFKNAF 148 (223)
Q Consensus 96 -----~I~li~GdA~evL~----~L--~~fDfVFIDa~K-------~~Y~~~f~~~-~~l~~GgvIV~DNvl 148 (223)
.++++.+|+.+.++ .+ +.||+|+.=..- .++..+|..+ +.|+|||.+++...+
T Consensus 146 ~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~ 217 (289)
T 2g72_A 146 QLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGAL 217 (289)
T ss_dssp HHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred HHHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 15778889877443 23 259999987542 2456667644 677999999886533
No 224
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.74 E-value=7.5e-08 Score=90.30 Aligned_cols=108 Identities=12% Similarity=0.050 Sum_probs=76.5
Q ss_pred HHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHH-------hhcCc--e-EEEEecchHH
Q 027409 37 AAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMY-------DVVGW--V-SEVIVRQAEE 106 (223)
Q Consensus 37 ~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~-------~a~G~--~-I~li~GdA~e 106 (223)
+....-.+||+||||+|. .++.+|.. ....+++.||+++++++.|+++.+ .. |+ . |+|+.||+.+
T Consensus 169 l~l~~gd~VLDLGCGtG~--l~l~lA~~--~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~-Gl~~~rVefi~GD~~~ 243 (438)
T 3uwp_A 169 IKMTDDDLFVDLGSGVGQ--VVLQVAAA--TNCKHHYGVEKADIPAKYAETMDREFRKWMKWY-GKKHAEYTLERGDFLS 243 (438)
T ss_dssp HCCCTTCEEEEESCTTSH--HHHHHHHH--CCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHH-TBCCCEEEEEECCTTS
T ss_pred cCCCCCCEEEEeCCCCCH--HHHHHHHH--CCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHh-CCCCCCeEEEECcccC
Confidence 344566799999999997 66666643 223479999999999999998753 45 76 3 9999999977
Q ss_pred Hh-cC-CCCccEEEEeCC--CcccHHHH-HHhccCCCceEEEEeCCCC
Q 027409 107 VM-GE-LKGVDFLVVDCT--SKDFARVL-RFARFSNKGAVLAFKNAFQ 149 (223)
Q Consensus 107 vL-~~-L~~fDfVFIDa~--K~~Y~~~f-~~~~~l~~GgvIV~DNvl~ 149 (223)
.- +. +..||+||+-.- ..+-...| +.++.|+|||.||+-..+.
T Consensus 244 lp~~d~~~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVssE~f~ 291 (438)
T 3uwp_A 244 EEWRERIANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSKPFA 291 (438)
T ss_dssp HHHHHHHHTCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEESSCSS
T ss_pred CccccccCCccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEeeccc
Confidence 32 11 247999998542 12223334 3457789999999987653
No 225
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.73 E-value=1.6e-08 Score=87.76 Aligned_cols=100 Identities=21% Similarity=0.182 Sum_probs=69.7
Q ss_pred HHHHHHHHhcC-CCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhc
Q 027409 31 ELLSAMAAGWN-AKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMG 109 (223)
Q Consensus 31 ~fL~~L~~~~~-ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~ 109 (223)
+++..|..... ..+|||||||+|. .+..|+. .+.+|+.+|+++++++.|+++ . .|+++.|||.+. +
T Consensus 28 ~l~~~l~~~~~~~~~vLDvGcGtG~--~~~~l~~----~~~~v~gvD~s~~ml~~a~~~---~---~v~~~~~~~e~~-~ 94 (257)
T 4hg2_A 28 ALFRWLGEVAPARGDALDCGCGSGQ--ASLGLAE----FFERVHAVDPGEAQIRQALRH---P---RVTYAVAPAEDT-G 94 (257)
T ss_dssp HHHHHHHHHSSCSSEEEEESCTTTT--THHHHHT----TCSEEEEEESCHHHHHTCCCC---T---TEEEEECCTTCC-C
T ss_pred HHHHHHHHhcCCCCCEEEEcCCCCH--HHHHHHH----hCCEEEEEeCcHHhhhhhhhc---C---Cceeehhhhhhh-c
Confidence 34555555543 4689999999998 6767753 357999999999998776531 1 289999999653 3
Q ss_pred C-CCCccEEEEeCCCccc---HHHHHHh-ccCCCceEEEE
Q 027409 110 E-LKGVDFLVVDCTSKDF---ARVLRFA-RFSNKGAVLAF 144 (223)
Q Consensus 110 ~-L~~fDfVFIDa~K~~Y---~~~f~~~-~~l~~GgvIV~ 144 (223)
- -+.||+|+.-..- ++ .+++..+ +.|+|||++++
T Consensus 95 ~~~~sfD~v~~~~~~-h~~~~~~~~~e~~rvLkpgG~l~~ 133 (257)
T 4hg2_A 95 LPPASVDVAIAAQAM-HWFDLDRFWAELRRVARPGAVFAA 133 (257)
T ss_dssp CCSSCEEEEEECSCC-TTCCHHHHHHHHHHHEEEEEEEEE
T ss_pred ccCCcccEEEEeeeh-hHhhHHHHHHHHHHHcCCCCEEEE
Confidence 1 1479999985332 33 5566544 77899998754
No 226
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.71 E-value=1.2e-08 Score=94.86 Aligned_cols=74 Identities=14% Similarity=0.100 Sum_probs=63.0
Q ss_pred CCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhh-cCce-EEEEecchHHHhcCC--CCccEE
Q 027409 42 AKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDV-VGWV-SEVIVRQAEEVMGEL--KGVDFL 117 (223)
Q Consensus 42 ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a-~G~~-I~li~GdA~evL~~L--~~fDfV 117 (223)
-++||++|||+|+ .+++||.. +++|+.+|+|+++++.|++|++.. .|+. |+++.||+.+.|+.+ +.||+|
T Consensus 94 g~~VLDLgcG~G~--~al~LA~~----g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV 167 (410)
T 3ll7_A 94 GTKVVDLTGGLGI--DFIALMSK----ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYI 167 (410)
T ss_dssp TCEEEESSCSSSH--HHHHHHTT----CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEE
T ss_pred CCEEEEeCCCchH--HHHHHHhc----CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEE
Confidence 5899999999998 77777632 579999999999999999999874 1555 999999999987764 489999
Q ss_pred EEeC
Q 027409 118 VVDC 121 (223)
Q Consensus 118 FIDa 121 (223)
|+|-
T Consensus 168 ~lDP 171 (410)
T 3ll7_A 168 YVDP 171 (410)
T ss_dssp EECC
T ss_pred EECC
Confidence 9994
No 227
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.70 E-value=6.4e-08 Score=86.13 Aligned_cols=89 Identities=15% Similarity=0.018 Sum_probs=71.5
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecc
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQ 103 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~Gd 103 (223)
.++|.+.+.+-..+......+|||||||+|+ .|..|+.. +++|++||+|+++++.|+++++.. + .++++.||
T Consensus 33 L~d~~i~~~Iv~~l~~~~~~~VLEIG~G~G~--lT~~La~~----~~~V~aVEid~~li~~a~~~~~~~-~-~v~vi~gD 104 (295)
T 3gru_A 33 LIDKNFVNKAVESANLTKDDVVLEIGLGKGI--LTEELAKN----AKKVYVIEIDKSLEPYANKLKELY-N-NIEIIWGD 104 (295)
T ss_dssp ECCHHHHHHHHHHTTCCTTCEEEEECCTTSH--HHHHHHHH----SSEEEEEESCGGGHHHHHHHHHHC-S-SEEEEESC
T ss_pred cCCHHHHHHHHHhcCCCCcCEEEEECCCchH--HHHHHHhc----CCEEEEEECCHHHHHHHHHHhccC-C-CeEEEECc
Confidence 6788777777666666777899999999998 78788754 479999999999999999999843 2 39999999
Q ss_pred hHHH-hcCCCCccEEEEeC
Q 027409 104 AEEV-MGELKGVDFLVVDC 121 (223)
Q Consensus 104 A~ev-L~~L~~fDfVFIDa 121 (223)
+++. ++. .+||.|+...
T Consensus 105 ~l~~~~~~-~~fD~Iv~Nl 122 (295)
T 3gru_A 105 ALKVDLNK-LDFNKVVANL 122 (295)
T ss_dssp TTTSCGGG-SCCSEEEEEC
T ss_pred hhhCCccc-CCccEEEEeC
Confidence 9874 232 2699999664
No 228
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.69 E-value=1.3e-08 Score=83.08 Aligned_cols=92 Identities=18% Similarity=0.091 Sum_probs=69.1
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCc-EEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC-CCccEEE
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCA-RHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL-KGVDFLV 118 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g-~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L-~~fDfVF 118 (223)
...+|||||||+|. .+..+ +. +++.+|+++++++.|++++ .. ++++.+|+.+ ++-- +.||+|+
T Consensus 36 ~~~~vLdiG~G~G~--~~~~l-------~~~~v~~vD~s~~~~~~a~~~~-~~----~~~~~~d~~~-~~~~~~~fD~v~ 100 (211)
T 2gs9_A 36 PGESLLEVGAGTGY--WLRRL-------PYPQKVGVEPSEAMLAVGRRRA-PE----ATWVRAWGEA-LPFPGESFDVVL 100 (211)
T ss_dssp CCSEEEEETCTTCH--HHHHC-------CCSEEEEECCCHHHHHHHHHHC-TT----SEEECCCTTS-CCSCSSCEEEEE
T ss_pred CCCeEEEECCCCCH--hHHhC-------CCCeEEEEeCCHHHHHHHHHhC-CC----cEEEEccccc-CCCCCCcEEEEE
Confidence 67899999999997 44443 34 8999999999999999887 21 6889999876 3321 4799999
Q ss_pred EeCCCc---ccHHHHHHh-ccCCCceEEEEeCC
Q 027409 119 VDCTSK---DFARVLRFA-RFSNKGAVLAFKNA 147 (223)
Q Consensus 119 IDa~K~---~Y~~~f~~~-~~l~~GgvIV~DNv 147 (223)
....-+ +...++..+ +.++|||.++....
T Consensus 101 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 133 (211)
T 2gs9_A 101 LFTTLEFVEDVERVLLEARRVLRPGGALVVGVL 133 (211)
T ss_dssp EESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EcChhhhcCCHHHHHHHHHHHcCCCCEEEEEec
Confidence 886533 346677654 66799998887643
No 229
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.69 E-value=4.6e-08 Score=77.08 Aligned_cols=96 Identities=13% Similarity=0.014 Sum_probs=72.1
Q ss_pred HhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC-CCccE
Q 027409 38 AGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL-KGVDF 116 (223)
Q Consensus 38 ~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L-~~fDf 116 (223)
...+..+|||||||.|. .+.+++.. .++++.+|.+++.++.|+++ . . .|+++.+| ++-- +.||+
T Consensus 14 ~~~~~~~vLDiG~G~G~--~~~~l~~~----~~~v~~vD~s~~~~~~a~~~---~-~-~v~~~~~d----~~~~~~~~D~ 78 (170)
T 3i9f_A 14 FEGKKGVIVDYGCGNGF--YCKYLLEF----ATKLYCIDINVIALKEVKEK---F-D-SVITLSDP----KEIPDNSVDF 78 (170)
T ss_dssp HSSCCEEEEEETCTTCT--THHHHHTT----EEEEEEECSCHHHHHHHHHH---C-T-TSEEESSG----GGSCTTCEEE
T ss_pred CcCCCCeEEEECCCCCH--HHHHHHhh----cCeEEEEeCCHHHHHHHHHh---C-C-CcEEEeCC----CCCCCCceEE
Confidence 45667799999999998 66677643 24999999999999999998 2 1 27999999 3322 47999
Q ss_pred EEEeCCCc---ccHHHHHHh-ccCCCceEEEEeCCC
Q 027409 117 LVVDCTSK---DFARVLRFA-RFSNKGAVLAFKNAF 148 (223)
Q Consensus 117 VFIDa~K~---~Y~~~f~~~-~~l~~GgvIV~DNvl 148 (223)
|+....-. +...+++.+ +.++|||.++.-+..
T Consensus 79 v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 114 (170)
T 3i9f_A 79 ILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWR 114 (170)
T ss_dssp EEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcC
Confidence 99886544 346677654 667999988876543
No 230
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.69 E-value=3.4e-08 Score=85.91 Aligned_cols=87 Identities=14% Similarity=0.065 Sum_probs=69.6
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecc
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQ 103 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~Gd 103 (223)
.+++.+.+.+-..+......+|||||||+|+ .|..|+.. +++|++||+|+++++.++++++.. + .++++.||
T Consensus 12 L~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~--lt~~La~~----~~~V~avEid~~~~~~~~~~~~~~-~-~v~~i~~D 83 (255)
T 3tqs_A 12 LHDSFVLQKIVSAIHPQKTDTLVEIGPGRGA--LTDYLLTE----CDNLALVEIDRDLVAFLQKKYNQQ-K-NITIYQND 83 (255)
T ss_dssp ECCHHHHHHHHHHHCCCTTCEEEEECCTTTT--THHHHTTT----SSEEEEEECCHHHHHHHHHHHTTC-T-TEEEEESC
T ss_pred ccCHHHHHHHHHhcCCCCcCEEEEEcccccH--HHHHHHHh----CCEEEEEECCHHHHHHHHHHHhhC-C-CcEEEEcc
Confidence 5678888877777777788899999999998 77777532 479999999999999999998753 2 28999999
Q ss_pred hHHH-hcCC---CCccEEEE
Q 027409 104 AEEV-MGEL---KGVDFLVV 119 (223)
Q Consensus 104 A~ev-L~~L---~~fDfVFI 119 (223)
+++. ++++ ++|| |+-
T Consensus 84 ~~~~~~~~~~~~~~~~-vv~ 102 (255)
T 3tqs_A 84 ALQFDFSSVKTDKPLR-VVG 102 (255)
T ss_dssp TTTCCGGGSCCSSCEE-EEE
T ss_pred hHhCCHHHhccCCCeE-EEe
Confidence 9985 5555 3688 443
No 231
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.68 E-value=6.2e-08 Score=89.11 Aligned_cols=108 Identities=19% Similarity=0.162 Sum_probs=78.5
Q ss_pred HHHHHHHH---HhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecch
Q 027409 30 AELLSAMA---AGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQA 104 (223)
Q Consensus 30 g~fL~~L~---~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA 104 (223)
..|-.++. ...+-|.||+||||+|. .+++.|.|. -.+|+.||.++ +++.|+++++.. |++ |+++.||+
T Consensus 69 ~aY~~Ai~~~~~~~~~k~VLDvG~GtGi--Ls~~Aa~aG---A~~V~ave~s~-~~~~a~~~~~~n-~~~~~i~~i~~~~ 141 (376)
T 4hc4_A 69 DAYRLGILRNWAALRGKTVLDVGAGTGI--LSIFCAQAG---ARRVYAVEASA-IWQQAREVVRFN-GLEDRVHVLPGPV 141 (376)
T ss_dssp HHHHHHHHTTHHHHTTCEEEEETCTTSH--HHHHHHHTT---CSEEEEEECST-THHHHHHHHHHT-TCTTTEEEEESCT
T ss_pred HHHHHHHHhCHHhcCCCEEEEeCCCccH--HHHHHHHhC---CCEEEEEeChH-HHHHHHHHHHHc-CCCceEEEEeeee
Confidence 44444443 34567899999999997 776655441 14899999985 899999999998 987 99999999
Q ss_pred HHHhcCC-CCccEEEEe---CC---CcccHHHHHHh-ccCCCceEEEEeC
Q 027409 105 EEVMGEL-KGVDFLVVD---CT---SKDFARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 105 ~evL~~L-~~fDfVFID---a~---K~~Y~~~f~~~-~~l~~GgvIV~DN 146 (223)
.++ .+ ++||+|+-. .. -.....++.+. +.|+|||+++-+-
T Consensus 142 ~~~--~lpe~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP~~ 189 (376)
T 4hc4_A 142 ETV--ELPEQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPAS 189 (376)
T ss_dssp TTC--CCSSCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEESCE
T ss_pred eee--cCCccccEEEeecccccccccchhhhHHHHHHhhCCCCceECCcc
Confidence 874 23 489999863 21 12334455555 5779999998654
No 232
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.66 E-value=1.2e-07 Score=83.87 Aligned_cols=99 Identities=10% Similarity=0.048 Sum_probs=69.3
Q ss_pred CCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-------EEEEecch----H-HHhc
Q 027409 42 AKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-------SEVIVRQA----E-EVMG 109 (223)
Q Consensus 42 ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-------I~li~GdA----~-evL~ 109 (223)
..+||+||||+|. .+..++. ...++|+.||+++++++.|++...+. +.. ++++.+|+ . +.|+
T Consensus 49 ~~~VLDlGCG~G~--~l~~~~~---~~~~~v~GiD~S~~~l~~A~~~~~~~-~~~~~~~~~~~~f~~~d~~~d~~~~~l~ 122 (302)
T 2vdw_A 49 KRKVLAIDFGNGA--DLEKYFY---GEIALLVATDPDADAIARGNERYNKL-NSGIKTKYYKFDYIQETIRSDTFVSSVR 122 (302)
T ss_dssp CCEEEETTCTTTT--THHHHHH---TTCSEEEEEESCHHHHHHHHHHHHHH-CC----CCCEEEEEECCTTSSSHHHHHH
T ss_pred CCeEEEEecCCcH--hHHHHHh---cCCCeEEEEECCHHHHHHHHHHHHhc-cccccccccccchhhhhcccchhhhhhh
Confidence 5799999999995 2323332 22469999999999999999998887 642 56766665 2 2343
Q ss_pred C-C--CCccEEEEeCC------CcccHHHHHHh-ccCCCceEEEEeC
Q 027409 110 E-L--KGVDFLVVDCT------SKDFARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 110 ~-L--~~fDfVFIDa~------K~~Y~~~f~~~-~~l~~GgvIV~DN 146 (223)
. + +.||+|+.-.. .++...++..+ +.|+|||++++.-
T Consensus 123 ~~~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~ 169 (302)
T 2vdw_A 123 EVFYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITT 169 (302)
T ss_dssp TTCCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 2 3 47999985421 12446777755 6789999999864
No 233
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.66 E-value=4.6e-08 Score=75.79 Aligned_cols=94 Identities=12% Similarity=-0.004 Sum_probs=66.1
Q ss_pred hcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHH-----hcC-C-
Q 027409 39 GWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEV-----MGE-L- 111 (223)
Q Consensus 39 ~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~ev-----L~~-L- 111 (223)
.....+|||+|||+|. .+++++... .++++++.+|.++ +.+. . .++++.+|+.+. ++. +
T Consensus 20 ~~~~~~vLd~G~G~G~--~~~~l~~~~-~~~~~v~~~D~~~-~~~~-------~---~~~~~~~d~~~~~~~~~~~~~~~ 85 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGG--WSQYVVTQI-GGKGRIIACDLLP-MDPI-------V---GVDFLQGDFRDELVMKALLERVG 85 (180)
T ss_dssp CCTTCEEEEESCTTCH--HHHHHHHHH-CTTCEEEEEESSC-CCCC-------T---TEEEEESCTTSHHHHHHHHHHHT
T ss_pred CCCCCeEEEeCCCCCH--HHHHHHHHh-CCCCeEEEEECcc-cccc-------C---cEEEEEcccccchhhhhhhccCC
Confidence 4567799999999998 676776543 3458999999999 6422 1 179999999764 211 2
Q ss_pred -CCccEEEEeCCCc---cc-----------HHHHHHh-ccCCCceEEEEeC
Q 027409 112 -KGVDFLVVDCTSK---DF-----------ARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 112 -~~fDfVFIDa~K~---~Y-----------~~~f~~~-~~l~~GgvIV~DN 146 (223)
+.||+|+.|..-. .. ..+++.+ +.++|||.+++-.
T Consensus 86 ~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (180)
T 1ej0_A 86 DSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKV 136 (180)
T ss_dssp TCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 4799999986432 11 4666644 6679999998743
No 234
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.64 E-value=4e-07 Score=79.18 Aligned_cols=114 Identities=10% Similarity=-0.056 Sum_probs=79.2
Q ss_pred HHHHHHHHH----hcCCCeEEEEccCc---chHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEec
Q 027409 30 AELLSAMAA----GWNAKLIVEAWTHG---GPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVR 102 (223)
Q Consensus 30 g~fL~~L~~----~~~ak~ILEIGT~~---Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~G 102 (223)
..|+..+++ ..+.++||+||||+ |. .+..++. ..++++|+.+|.+|++++.|++.+... + .++++.|
T Consensus 62 ~~~~~~~~~~l~~~~~~~~vLDlGcG~pt~G~--~~~~~~~--~~p~~~v~~vD~sp~~l~~Ar~~~~~~-~-~v~~~~~ 135 (274)
T 2qe6_A 62 RKVLVRGVRFLAGEAGISQFLDLGSGLPTVQN--THEVAQS--VNPDARVVYVDIDPMVLTHGRALLAKD-P-NTAVFTA 135 (274)
T ss_dssp HHHHHHHHHHHHTTTCCCEEEEETCCSCCSSC--HHHHHHH--HCTTCEEEEEESSHHHHHHHHHHHTTC-T-TEEEEEC
T ss_pred hHHHHHHHHHHhhccCCCEEEEECCCCCCCCh--HHHHHHH--hCCCCEEEEEECChHHHHHHHHhcCCC-C-CeEEEEe
Confidence 345544433 33568999999999 97 4433332 234689999999999999999998543 2 2899999
Q ss_pred chHHH--h-------cCC--CCccEEEEeCC-----CcccHHHHHHh-ccCCCceEEEEeCCCC
Q 027409 103 QAEEV--M-------GEL--KGVDFLVVDCT-----SKDFARVLRFA-RFSNKGAVLAFKNAFQ 149 (223)
Q Consensus 103 dA~ev--L-------~~L--~~fDfVFIDa~-----K~~Y~~~f~~~-~~l~~GgvIV~DNvl~ 149 (223)
|+.+. + ..+ +.||+|++-.- .+.....|..+ +.|+|||.++......
T Consensus 136 D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 136 DVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp CTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred eCCCchhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 98642 1 123 47999987642 22356677654 6789999988877544
No 235
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.64 E-value=8.1e-08 Score=79.30 Aligned_cols=100 Identities=25% Similarity=0.179 Sum_probs=73.7
Q ss_pred HHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHh
Q 027409 29 VAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVM 108 (223)
Q Consensus 29 ~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL 108 (223)
....+..+.+....++|||||||+|. .+..++. . +.+|.++++++.|+++ . ++++.+|+.+ +
T Consensus 35 ~~~~~~~l~~~~~~~~vLDiG~G~G~--~~~~l~~--~------~~vD~s~~~~~~a~~~---~----~~~~~~d~~~-~ 96 (219)
T 1vlm_A 35 YLSELQAVKCLLPEGRGVEIGVGTGR--FAVPLKI--K------IGVEPSERMAEIARKR---G----VFVLKGTAEN-L 96 (219)
T ss_dssp HHHHHHHHHHHCCSSCEEEETCTTST--THHHHTC--C------EEEESCHHHHHHHHHT---T----CEEEECBTTB-C
T ss_pred HHHHHHHHHHhCCCCcEEEeCCCCCH--HHHHHHH--H------hccCCCHHHHHHHHhc---C----CEEEEccccc-C
Confidence 34455666777778999999999998 5555531 1 9999999999999887 3 6889999865 3
Q ss_pred cCC-CCccEEEEeCCC---cccHHHHHHh-ccCCCceEEEEeC
Q 027409 109 GEL-KGVDFLVVDCTS---KDFARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 109 ~~L-~~fDfVFIDa~K---~~Y~~~f~~~-~~l~~GgvIV~DN 146 (223)
+.- +.||+|+....- .+...+++.+ +.++|||.++...
T Consensus 97 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 139 (219)
T 1vlm_A 97 PLKDESFDFALMVTTICFVDDPERALKEAYRILKKGGYLIVGI 139 (219)
T ss_dssp CSCTTCEEEEEEESCGGGSSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCCeeEEEEcchHhhccCHHHHHHHHHHHcCCCcEEEEEE
Confidence 322 479999988643 2346677655 5679999988764
No 236
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.62 E-value=4.5e-08 Score=90.47 Aligned_cols=102 Identities=11% Similarity=0.092 Sum_probs=75.1
Q ss_pred hcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhh----cCc---e-EEEEecchHHHhcC
Q 027409 39 GWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDV----VGW---V-SEVIVRQAEEVMGE 110 (223)
Q Consensus 39 ~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a----~G~---~-I~li~GdA~evL~~ 110 (223)
..+||+||-||-|.|. ++.-+ .+.+..+|+.+|+||+.++.||++|... +.. . ++++.+||.+.|.+
T Consensus 203 ~~~pkrVLIIGgGdG~---~~rev--lkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~ 277 (381)
T 3c6k_A 203 DYTGKDVLILGGGDGG---ILCEI--VKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKR 277 (381)
T ss_dssp CCTTCEEEEEECTTCH---HHHHH--HTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHH
T ss_pred cCCCCeEEEECCCcHH---HHHHH--HhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHh
Confidence 3478999999999885 32222 2333479999999999999999997532 111 1 89999999999975
Q ss_pred C----CCccEEEEeCCC------------cc-cHHHHHHh-ccCCCceEEEEe
Q 027409 111 L----KGVDFLVVDCTS------------KD-FARVLRFA-RFSNKGAVLAFK 145 (223)
Q Consensus 111 L----~~fDfVFIDa~K------------~~-Y~~~f~~~-~~l~~GgvIV~D 145 (223)
. +.||.|++|+.- .. +.++|+.+ +.|++||+++.-
T Consensus 278 ~~~~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q 330 (381)
T 3c6k_A 278 YAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQ 330 (381)
T ss_dssp HHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred hhhccCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 3 379999999631 11 25677776 467999999963
No 237
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.62 E-value=2.1e-07 Score=81.78 Aligned_cols=88 Identities=16% Similarity=0.101 Sum_probs=69.2
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecc
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQ 103 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~Gd 103 (223)
.+++.+.+-+-..+..... +|||||||+|+ .|..|+.. +++|+.+|+|+++++.+++++... .++++.||
T Consensus 30 L~d~~i~~~Iv~~~~~~~~-~VLEIG~G~G~--lt~~L~~~----~~~V~avEid~~~~~~l~~~~~~~---~v~vi~~D 99 (271)
T 3fut_A 30 LVSEAHLRRIVEAARPFTG-PVFEVGPGLGA--LTRALLEA----GAEVTAIEKDLRLRPVLEETLSGL---PVRLVFQD 99 (271)
T ss_dssp ECCHHHHHHHHHHHCCCCS-CEEEECCTTSH--HHHHHHHT----TCCEEEEESCGGGHHHHHHHTTTS---SEEEEESC
T ss_pred cCCHHHHHHHHHhcCCCCC-eEEEEeCchHH--HHHHHHHc----CCEEEEEECCHHHHHHHHHhcCCC---CEEEEECC
Confidence 6788877777666666655 99999999998 77777753 478999999999999999987632 38999999
Q ss_pred hHHH-hcCCCCccEEEEeC
Q 027409 104 AEEV-MGELKGVDFLVVDC 121 (223)
Q Consensus 104 A~ev-L~~L~~fDfVFIDa 121 (223)
+++. ++++..+|.|+-.-
T Consensus 100 ~l~~~~~~~~~~~~iv~Nl 118 (271)
T 3fut_A 100 ALLYPWEEVPQGSLLVANL 118 (271)
T ss_dssp GGGSCGGGSCTTEEEEEEE
T ss_pred hhhCChhhccCccEEEecC
Confidence 9985 44444688877654
No 238
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.61 E-value=9.4e-08 Score=77.81 Aligned_cols=94 Identities=10% Similarity=0.033 Sum_probs=69.5
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCccEE
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVDFL 117 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fDfV 117 (223)
.+..+|||||||.|. .+.+++. . +.+++.+|++++.++.|++++ .+++.+|+.+....+ +.||+|
T Consensus 31 ~~~~~vLdiG~G~G~--~~~~l~~--~--~~~~~~~D~~~~~~~~~~~~~-------~~~~~~d~~~~~~~~~~~~fD~v 97 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGA--LGAAIKE--N--GTRVSGIEAFPEAAEQAKEKL-------DHVVLGDIETMDMPYEEEQFDCV 97 (230)
T ss_dssp TTCSEEEEETCTTSH--HHHHHHT--T--TCEEEEEESSHHHHHHHHTTS-------SEEEESCTTTCCCCSCTTCEEEE
T ss_pred cCCCcEEEeCCCCCH--HHHHHHh--c--CCeEEEEeCCHHHHHHHHHhC-------CcEEEcchhhcCCCCCCCccCEE
Confidence 478899999999998 6666653 2 479999999999988887643 367889987643333 479999
Q ss_pred EEeCCCcc---cHHHHHHh-ccCCCceEEEEeC
Q 027409 118 VVDCTSKD---FARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 118 FIDa~K~~---Y~~~f~~~-~~l~~GgvIV~DN 146 (223)
+....-.+ ...+++.+ +.++|||.+++..
T Consensus 98 ~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~ 130 (230)
T 3cc8_A 98 IFGDVLEHLFDPWAVIEKVKPYIKQNGVILASI 130 (230)
T ss_dssp EEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEE
T ss_pred EECChhhhcCCHHHHHHHHHHHcCCCCEEEEEe
Confidence 98754333 35666655 5679999988753
No 239
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.59 E-value=1.8e-07 Score=80.97 Aligned_cols=103 Identities=11% Similarity=0.038 Sum_probs=70.4
Q ss_pred CCCeEEEEccCcchHHHHHHHHH--hcCCCCcEE--EEEeCCchHHHHHHHHHHhhcCce---EEEEecchHHHhc----
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAI--AARHTCARH--VCIVPDERSRLAYVKAMYDVVGWV---SEVIVRQAEEVMG---- 109 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~--A~~~~~g~i--~TIE~d~e~~~~Ar~~~~~a~G~~---I~li~GdA~evL~---- 109 (223)
...+|||||||+|. .++.++. +...++.++ +.+|+++++++.|++.+++..|+. +++..+++.+...
T Consensus 52 ~~~~VLDiG~GtG~--~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 129 (292)
T 2aot_A 52 SEIKILSIGGGAGE--IDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLE 129 (292)
T ss_dssp SEEEEEEETCTTSH--HHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHT
T ss_pred CCCeEEEEcCCCCH--HHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcc
Confidence 45699999999996 4432221 222245655 999999999999999987631443 5667888876542
Q ss_pred CC--CCccEEEEeCCCcc---cHHHHHHh-ccCCCceEEEEe
Q 027409 110 EL--KGVDFLVVDCTSKD---FARVLRFA-RFSNKGAVLAFK 145 (223)
Q Consensus 110 ~L--~~fDfVFIDa~K~~---Y~~~f~~~-~~l~~GgvIV~D 145 (223)
.+ +.||+|+.=..-.. -...+..+ +.|+|||.+++-
T Consensus 130 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~ 171 (292)
T 2aot_A 130 KKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLII 171 (292)
T ss_dssp TTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEE
T ss_pred ccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEE
Confidence 12 47999998754333 35566544 677999988864
No 240
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.58 E-value=3.1e-08 Score=84.77 Aligned_cols=101 Identities=10% Similarity=-0.027 Sum_probs=71.3
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCC-cEEEEEeCCchHHHHHHHHHHhhcC-------------------------
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTC-ARHVCIVPDERSRLAYVKAMYDVVG------------------------- 94 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~-g~i~TIE~d~e~~~~Ar~~~~~a~G------------------------- 94 (223)
+.++|||||||+|. .+++++ . .+ .+|+.+|.++.+++.|++++++. .
T Consensus 55 ~g~~vLDiGCG~G~--~~~~~~--~--~~~~~v~g~D~s~~~l~~a~~~~~~~-~~~~d~s~~~~~~~~~~~~~~~~~~~ 127 (263)
T 2a14_A 55 QGDTLIDIGSGPTI--YQVLAA--C--DSFQDITLSDFTDRNREELEKWLKKE-PGAYDWTPAVKFACELEGNSGRWEEK 127 (263)
T ss_dssp CEEEEEESSCTTCC--GGGTTG--G--GTEEEEEEEESCHHHHHHHHHHHHTC-TTCCCCHHHHHHHHHHTTCGGGHHHH
T ss_pred CCceEEEeCCCccH--HHHHHH--H--hhhcceeeccccHHHHHHHHHHHhcC-CCcccchHHHHHHHhcCCCCcchhhH
Confidence 55789999999995 443332 1 23 37999999999999999987542 1
Q ss_pred ---ce--EE-EEecchHHHhc--C--CCCccEEEEeC-------CCcccHHHHHHh-ccCCCceEEEEeCCC
Q 027409 95 ---WV--SE-VIVRQAEEVMG--E--LKGVDFLVVDC-------TSKDFARVLRFA-RFSNKGAVLAFKNAF 148 (223)
Q Consensus 95 ---~~--I~-li~GdA~evL~--~--L~~fDfVFIDa-------~K~~Y~~~f~~~-~~l~~GgvIV~DNvl 148 (223)
+. |+ ++.+|..+..+ . .++||+|+.=- +.+++...+..+ +.|+|||.++....+
T Consensus 128 ~~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~ 199 (263)
T 2a14_A 128 EEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTL 199 (263)
T ss_dssp HHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred HHHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEee
Confidence 11 44 89999887433 2 24799999852 234566777644 677999999987654
No 241
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.57 E-value=2.8e-07 Score=82.06 Aligned_cols=93 Identities=5% Similarity=-0.082 Sum_probs=69.6
Q ss_pred cHHHHHHHHHHHH----hcCCCeEEEEccCcchHHHHHHHHHhcCC---CCcEEEEEeCCchHHHHHHHHHHhhcCceEE
Q 027409 26 ESGVAELLSAMAA----GWNAKLIVEAWTHGGPITTSIGLAIAARH---TCARHVCIVPDERSRLAYVKAMYDVVGWVSE 98 (223)
Q Consensus 26 ~p~~g~fL~~L~~----~~~ak~ILEIGT~~Gys~Stl~la~A~~~---~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~ 98 (223)
++.+..++..++. .....+|||+|||+|. .++.++..... .+.+++.+|+|++.++.|+.++... |+.++
T Consensus 111 P~~i~~~~~~ll~~l~~~~~~~~VlDp~cGsG~--~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~-g~~~~ 187 (344)
T 2f8l_A 111 PDSIGFIVAYLLEKVIQKKKNVSILDPACGTAN--LLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQ-RQKMT 187 (344)
T ss_dssp CHHHHHHHHHHHHHHHTTCSEEEEEETTCTTSH--HHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHH-TCCCE
T ss_pred hHHHHHHHHHHHHHhcCCCCCCEEEeCCCCccH--HHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhC-CCCce
Confidence 4455666555553 2245799999999997 55566544321 1278999999999999999999988 88899
Q ss_pred EEecchHHHhcCCCCccEEEEeCC
Q 027409 99 VIVRQAEEVMGELKGVDFLVVDCT 122 (223)
Q Consensus 99 li~GdA~evL~~L~~fDfVFIDa~ 122 (223)
++.||+++... ...||+|+.+.-
T Consensus 188 i~~~D~l~~~~-~~~fD~Ii~NPP 210 (344)
T 2f8l_A 188 LLHQDGLANLL-VDPVDVVISDLP 210 (344)
T ss_dssp EEESCTTSCCC-CCCEEEEEEECC
T ss_pred EEECCCCCccc-cCCccEEEECCC
Confidence 99999987432 247999999843
No 242
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.55 E-value=1.6e-07 Score=83.69 Aligned_cols=80 Identities=15% Similarity=0.079 Sum_probs=65.4
Q ss_pred hcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHH---hcCC--CC
Q 027409 39 GWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEV---MGEL--KG 113 (223)
Q Consensus 39 ~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~ev---L~~L--~~ 113 (223)
.....+||++|||+|. .+++++... + +++|+.+|+|+++++.|+++++.. |..++++.||+.+. ++.+ ..
T Consensus 24 ~~~g~~vLD~g~G~G~--~s~~la~~~-~-~~~VigvD~d~~al~~A~~~~~~~-g~~v~~v~~d~~~l~~~l~~~g~~~ 98 (301)
T 1m6y_A 24 PEDEKIILDCTVGEGG--HSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEF-SDRVSLFKVSYREADFLLKTLGIEK 98 (301)
T ss_dssp CCTTCEEEETTCTTSH--HHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGG-TTTEEEEECCGGGHHHHHHHTTCSC
T ss_pred CCCCCEEEEEeCCcCH--HHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEECCHHHHHHHHHhcCCCC
Confidence 3455799999999997 777887643 2 689999999999999999999998 83399999998764 3433 47
Q ss_pred ccEEEEeCCC
Q 027409 114 VDFLVVDCTS 123 (223)
Q Consensus 114 fDfVFIDa~K 123 (223)
||.|++|...
T Consensus 99 ~D~Vl~D~gv 108 (301)
T 1m6y_A 99 VDGILMDLGV 108 (301)
T ss_dssp EEEEEEECSC
T ss_pred CCEEEEcCcc
Confidence 9999999853
No 243
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.53 E-value=3.7e-07 Score=73.71 Aligned_cols=92 Identities=13% Similarity=0.076 Sum_probs=63.0
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEecchHHHh----------
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVRQAEEVM---------- 108 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~GdA~evL---------- 108 (223)
....+|||||||+|. .++.++....+.+++|+.+|+++. + ... ++++.||+.+.-
T Consensus 21 ~~~~~vLDlGcG~G~--~~~~l~~~~~~~~~~v~gvD~s~~-----------~-~~~~v~~~~~d~~~~~~~~~~~~~~i 86 (201)
T 2plw_A 21 KKNKIILDIGCYPGS--WCQVILERTKNYKNKIIGIDKKIM-----------D-PIPNVYFIQGEIGKDNMNNIKNINYI 86 (201)
T ss_dssp CTTEEEEEESCTTCH--HHHHHHHHTTTSCEEEEEEESSCC-----------C-CCTTCEEEECCTTTTSSCCC------
T ss_pred CCCCEEEEeCCCCCH--HHHHHHHHcCCCCceEEEEeCCcc-----------C-CCCCceEEEccccchhhhhhcccccc
Confidence 355799999999998 677776543212689999999984 2 233 789999987642
Q ss_pred -------------cCC--CCccEEEEeCCCcc--------cH------HHHH-HhccCCCceEEEEe
Q 027409 109 -------------GEL--KGVDFLVVDCTSKD--------FA------RVLR-FARFSNKGAVLAFK 145 (223)
Q Consensus 109 -------------~~L--~~fDfVFIDa~K~~--------Y~------~~f~-~~~~l~~GgvIV~D 145 (223)
..+ ..||+|+.|..... +. ..+. ..+.|+|||.+++.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 153 (201)
T 2plw_A 87 DNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVK 153 (201)
T ss_dssp -----CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEE
Confidence 002 37999999975322 11 2444 33677999999984
No 244
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.49 E-value=6.3e-07 Score=85.53 Aligned_cols=75 Identities=19% Similarity=0.012 Sum_probs=64.1
Q ss_pred hcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCc-eEEEEecchHHHhcCC--CCcc
Q 027409 39 GWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGW-VSEVIVRQAEEVMGEL--KGVD 115 (223)
Q Consensus 39 ~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~-~I~li~GdA~evL~~L--~~fD 115 (223)
+.+|-+||+||||.|. .+.+||. .|+.||.||.+++.++.||.+.++. |. .|+++.+++.+..... +.||
T Consensus 64 ~~~~~~vLDvGCG~G~--~~~~la~----~ga~V~giD~~~~~i~~a~~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~fD 136 (569)
T 4azs_A 64 LGRPLNVLDLGCAQGF--FSLSLAS----KGATIVGIDFQQENINVCRALAEEN-PDFAAEFRVGRIEEVIAALEEGEFD 136 (569)
T ss_dssp HTSCCEEEEETCTTSH--HHHHHHH----TTCEEEEEESCHHHHHHHHHHHHTS-TTSEEEEEECCHHHHHHHCCTTSCS
T ss_pred cCCCCeEEEECCCCcH--HHHHHHh----CCCEEEEECCCHHHHHHHHHHHHhc-CCCceEEEECCHHHHhhhccCCCcc
Confidence 4578899999999998 7778874 2789999999999999999999988 85 5999999999987654 4799
Q ss_pred EEEEe
Q 027409 116 FLVVD 120 (223)
Q Consensus 116 fVFID 120 (223)
.|+.=
T Consensus 137 ~v~~~ 141 (569)
T 4azs_A 137 LAIGL 141 (569)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 99764
No 245
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.46 E-value=3.9e-07 Score=80.28 Aligned_cols=78 Identities=12% Similarity=-0.030 Sum_probs=63.2
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecc
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQ 103 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~Gd 103 (223)
.+++.+.+.+-..+......+|||||||+|+ .|..|+......+++|+.||+|+++++.|++++ . -.++++.||
T Consensus 25 L~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~--lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~--~--~~v~~i~~D 98 (279)
T 3uzu_A 25 LVDHGVIDAIVAAIRPERGERMVEIGPGLGA--LTGPVIARLATPGSPLHAVELDRDLIGRLEQRF--G--ELLELHAGD 98 (279)
T ss_dssp ECCHHHHHHHHHHHCCCTTCEEEEECCTTST--THHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH--G--GGEEEEESC
T ss_pred cCCHHHHHHHHHhcCCCCcCEEEEEccccHH--HHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc--C--CCcEEEECC
Confidence 6788887777777777778899999999998 777887654322467999999999999999994 2 138999999
Q ss_pred hHHH
Q 027409 104 AEEV 107 (223)
Q Consensus 104 A~ev 107 (223)
+++.
T Consensus 99 ~~~~ 102 (279)
T 3uzu_A 99 ALTF 102 (279)
T ss_dssp GGGC
T ss_pred hhcC
Confidence 9984
No 246
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.45 E-value=2.3e-07 Score=76.49 Aligned_cols=88 Identities=18% Similarity=0.165 Sum_probs=61.0
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEecchHHH---------hc
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVRQAEEV---------MG 109 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~GdA~ev---------L~ 109 (223)
.+..+|||+|||+|. .++.+|. . +++|+.||+++.. ... ++++.||+.+. ++
T Consensus 24 ~~g~~VLDlG~G~G~--~s~~la~--~--~~~V~gvD~~~~~------------~~~~v~~~~~D~~~~~~~~~~~~~~~ 85 (191)
T 3dou_A 24 RKGDAVIEIGSSPGG--WTQVLNS--L--ARKIISIDLQEME------------EIAGVRFIRCDIFKETIFDDIDRALR 85 (191)
T ss_dssp CTTCEEEEESCTTCH--HHHHHTT--T--CSEEEEEESSCCC------------CCTTCEEEECCTTSSSHHHHHHHHHH
T ss_pred CCCCEEEEEeecCCH--HHHHHHH--c--CCcEEEEeccccc------------cCCCeEEEEccccCHHHHHHHHHHhh
Confidence 356899999999997 6666542 2 7899999999862 233 89999998652 11
Q ss_pred --CCCCccEEEEeCCCcc--------------cHHHHHH-hccCCCceEEEEe
Q 027409 110 --ELKGVDFLVVDCTSKD--------------FARVLRF-ARFSNKGAVLAFK 145 (223)
Q Consensus 110 --~L~~fDfVFIDa~K~~--------------Y~~~f~~-~~~l~~GgvIV~D 145 (223)
..++||+|+.|+...- ....++. .+.|+|||.+|+-
T Consensus 86 ~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k 138 (191)
T 3dou_A 86 EEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLK 138 (191)
T ss_dssp HHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEE
Confidence 0037999999985421 1223332 3677999999964
No 247
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.42 E-value=2.2e-07 Score=82.62 Aligned_cols=99 Identities=9% Similarity=-0.033 Sum_probs=69.9
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCCCCccEE
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGELKGVDFL 117 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L~~fDfV 117 (223)
.+..+|||||||+|. .+..++... ++.+++.+|. ++... +++.++. ++. |+++.||+.+-++ .||+|
T Consensus 183 ~~~~~vLDvG~G~G~--~~~~l~~~~--p~~~~~~~D~-~~~~~--~~~~~~~-~~~~~v~~~~~d~~~~~p---~~D~v 251 (348)
T 3lst_A 183 PATGTVADVGGGRGG--FLLTVLREH--PGLQGVLLDR-AEVVA--RHRLDAP-DVAGRWKVVEGDFLREVP---HADVH 251 (348)
T ss_dssp CSSEEEEEETCTTSH--HHHHHHHHC--TTEEEEEEEC-HHHHT--TCCCCCG-GGTTSEEEEECCTTTCCC---CCSEE
T ss_pred cCCceEEEECCccCH--HHHHHHHHC--CCCEEEEecC-HHHhh--ccccccc-CCCCCeEEEecCCCCCCC---CCcEE
Confidence 457899999999998 777777543 4678899999 45444 5555555 665 9999999985555 89999
Q ss_pred EEeCCC-----cccHHHHHHh-ccCCCceEEEE-eCCCC
Q 027409 118 VVDCTS-----KDFARVLRFA-RFSNKGAVLAF-KNAFQ 149 (223)
Q Consensus 118 FIDa~K-----~~Y~~~f~~~-~~l~~GgvIV~-DNvl~ 149 (223)
++-.-- .+...++..+ +.++|||.++. |.++.
T Consensus 252 ~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~ 290 (348)
T 3lst_A 252 VLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVP 290 (348)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBC
T ss_pred EEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 985432 2335677655 66788887755 44443
No 248
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.40 E-value=3.3e-07 Score=81.69 Aligned_cols=110 Identities=9% Similarity=-0.013 Sum_probs=72.5
Q ss_pred cHHHHHHHHHHHHhc---CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEec
Q 027409 26 ESGVAELLSAMAAGW---NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVR 102 (223)
Q Consensus 26 ~p~~g~fL~~L~~~~---~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~G 102 (223)
+...-.+..+|-+.. ..++||+||||+|+ .|.+|+.. ..++|+.+|+++++++.|.++-.+. +.+-..
T Consensus 67 srg~~Kl~~~l~~~~~~~~g~~vLDiGcGTG~--~t~~L~~~---ga~~V~aVDvs~~mL~~a~r~~~rv----~~~~~~ 137 (291)
T 3hp7_A 67 SRGGLKLEKALAVFNLSVEDMITIDIGASTGG--FTDVMLQN---GAKLVYAVDVGTNQLVWKLRQDDRV----RSMEQY 137 (291)
T ss_dssp STTHHHHHHHHHHTTCCCTTCEEEEETCTTSH--HHHHHHHT---TCSEEEEECSSSSCSCHHHHTCTTE----EEECSC
T ss_pred cchHHHHHHHHHhcCCCccccEEEecCCCccH--HHHHHHhC---CCCEEEEEECCHHHHHHHHHhCccc----ceeccc
Confidence 444445555554442 35799999999998 77777642 2369999999999988764432221 222223
Q ss_pred chHHHhc-CCC--CccEEEEeCCCcccHHHHHHh-ccCCCceEEEE
Q 027409 103 QAEEVMG-ELK--GVDFLVVDCTSKDFARVLRFA-RFSNKGAVLAF 144 (223)
Q Consensus 103 dA~evL~-~L~--~fDfVFIDa~K~~Y~~~f~~~-~~l~~GgvIV~ 144 (223)
++...-. .+. .||+|++|..-......|..+ +.|+|||.+|+
T Consensus 138 ni~~l~~~~l~~~~fD~v~~d~sf~sl~~vL~e~~rvLkpGG~lv~ 183 (291)
T 3hp7_A 138 NFRYAEPVDFTEGLPSFASIDVSFISLNLILPALAKILVDGGQVVA 183 (291)
T ss_dssp CGGGCCGGGCTTCCCSEEEECCSSSCGGGTHHHHHHHSCTTCEEEE
T ss_pred CceecchhhCCCCCCCEEEEEeeHhhHHHHHHHHHHHcCcCCEEEE
Confidence 3322111 232 499999999877778888754 78899998877
No 249
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.39 E-value=3.8e-07 Score=77.81 Aligned_cols=111 Identities=12% Similarity=0.041 Sum_probs=70.3
Q ss_pred CCcHHHHHHHHHHHHhc---CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEE
Q 027409 24 IKESGVAELLSAMAAGW---NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVI 100 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~---~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li 100 (223)
-+++..-.+..+|.... ..++|||||||+|+ .+.+|+.. ...+|+.||+++++++.|+++..+. . ..
T Consensus 17 yvsrg~~kL~~~L~~~~~~~~g~~VLDiGcGtG~--~t~~la~~---g~~~V~gvDis~~ml~~a~~~~~~~-~----~~ 86 (232)
T 3opn_A 17 YVSRGGLKLEKALKEFHLEINGKTCLDIGSSTGG--FTDVMLQN---GAKLVYALDVGTNQLAWKIRSDERV-V----VM 86 (232)
T ss_dssp SSSTTHHHHHHHHHHTTCCCTTCEEEEETCTTSH--HHHHHHHT---TCSEEEEECSSCCCCCHHHHTCTTE-E----EE
T ss_pred ccCCcHHHHHHHHHHcCCCCCCCEEEEEccCCCH--HHHHHHhc---CCCEEEEEcCCHHHHHHHHHhCccc-c----cc
Confidence 44544444444444433 34699999999998 77777642 1249999999999999988765543 1 11
Q ss_pred ec-chHHHh-cCCC--CccEEEEeCCCcccHHHHHHh-ccCCCceEEEE
Q 027409 101 VR-QAEEVM-GELK--GVDFLVVDCTSKDFARVLRFA-RFSNKGAVLAF 144 (223)
Q Consensus 101 ~G-dA~evL-~~L~--~fDfVFIDa~K~~Y~~~f~~~-~~l~~GgvIV~ 144 (223)
.. +....- ..+. .||++.+|..-.....+|..+ +.|+|||.+++
T Consensus 87 ~~~~~~~~~~~~~~~~~~d~~~~D~v~~~l~~~l~~i~rvLkpgG~lv~ 135 (232)
T 3opn_A 87 EQFNFRNAVLADFEQGRPSFTSIDVSFISLDLILPPLYEILEKNGEVAA 135 (232)
T ss_dssp CSCCGGGCCGGGCCSCCCSEEEECCSSSCGGGTHHHHHHHSCTTCEEEE
T ss_pred ccceEEEeCHhHcCcCCCCEEEEEEEhhhHHHHHHHHHHhccCCCEEEE
Confidence 11 111111 1222 266666676655667788755 67899998887
No 250
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.39 E-value=1.2e-06 Score=78.49 Aligned_cols=103 Identities=7% Similarity=-0.049 Sum_probs=74.7
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEecchHHHhcCCCCccEEE
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVRQAEEVMGELKGVDFLV 118 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~GdA~evL~~L~~fDfVF 118 (223)
.+.++||+||||.|. .++.++.+. ++.+++-.|. |+.++.|+++++.. +.. |+++.||..+- ....+|+++
T Consensus 178 ~~~~~v~DvGgG~G~--~~~~l~~~~--p~~~~~~~dl-p~v~~~a~~~~~~~-~~~rv~~~~gD~~~~--~~~~~D~~~ 249 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGA--LAKECMSLY--PGCKITVFDI-PEVVWTAKQHFSFQ-EEEQIDFQEGDFFKD--PLPEADLYI 249 (353)
T ss_dssp GGCSEEEEETCTTSH--HHHHHHHHC--SSCEEEEEEC-HHHHHHHHHHSCC---CCSEEEEESCTTTS--CCCCCSEEE
T ss_pred ccCCeEEeeCCCCCH--HHHHHHHhC--CCceeEeccC-HHHHHHHHHhhhhc-ccCceeeecCccccC--CCCCceEEE
Confidence 467899999999998 777777653 4667777776 89999999999877 766 99999998752 235689999
Q ss_pred EeCCC-----cccHHHHHHh-ccCCCce-EEEEeCCCCC
Q 027409 119 VDCTS-----KDFARVLRFA-RFSNKGA-VLAFKNAFQR 150 (223)
Q Consensus 119 IDa~K-----~~Y~~~f~~~-~~l~~Gg-vIV~DNvl~~ 150 (223)
+=.-- ++-.+.|..+ +.++||| ++|.|.++..
T Consensus 250 ~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~ 288 (353)
T 4a6d_A 250 LARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDE 288 (353)
T ss_dssp EESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCT
T ss_pred eeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCC
Confidence 85432 3335667655 4567777 6777777753
No 251
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.35 E-value=4.5e-07 Score=74.16 Aligned_cols=94 Identities=13% Similarity=0.078 Sum_probs=67.6
Q ss_pred HHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHh
Q 027409 29 VAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVM 108 (223)
Q Consensus 29 ~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL 108 (223)
...++..+.......+|||||||+|. .+..+ ..+++.+|.+++ . ++++.+|+.+ +
T Consensus 55 ~~~~~~~l~~~~~~~~vLDiG~G~G~--~~~~l-------~~~v~~~D~s~~-----------~----~~~~~~d~~~-~ 109 (215)
T 2zfu_A 55 VDRIARDLRQRPASLVVADFGCGDCR--LASSI-------RNPVHCFDLASL-----------D----PRVTVCDMAQ-V 109 (215)
T ss_dssp HHHHHHHHHTSCTTSCEEEETCTTCH--HHHHC-------CSCEEEEESSCS-----------S----TTEEESCTTS-C
T ss_pred HHHHHHHHhccCCCCeEEEECCcCCH--HHHHh-------hccEEEEeCCCC-----------C----ceEEEecccc-C
Confidence 44567777666677899999999997 55443 158999999998 2 4778899877 3
Q ss_pred cCC-CCccEEEEeCCC--cccHHHHHHh-ccCCCceEEEEeCC
Q 027409 109 GEL-KGVDFLVVDCTS--KDFARVLRFA-RFSNKGAVLAFKNA 147 (223)
Q Consensus 109 ~~L-~~fDfVFIDa~K--~~Y~~~f~~~-~~l~~GgvIV~DNv 147 (223)
+-- +.||+|+....- .+...+++.+ +.++|||.+++-..
T Consensus 110 ~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~~gG~l~i~~~ 152 (215)
T 2zfu_A 110 PLEDESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEV 152 (215)
T ss_dssp SCCTTCEEEEEEESCCCSSCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCCCCEeEEEEehhccccCHHHHHHHHHHhCCCCeEEEEEEc
Confidence 322 479999987542 3456677654 66799998887543
No 252
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.35 E-value=6.9e-07 Score=76.32 Aligned_cols=76 Identities=13% Similarity=0.048 Sum_probs=59.9
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecc
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQ 103 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~Gd 103 (223)
.+++...+.+-..+......+|||||||+|+ .|..|+.. +++++.+|+|+++++.|+++++.. + .++++.||
T Consensus 13 l~d~~~~~~i~~~~~~~~~~~VLDiG~G~G~--lt~~l~~~----~~~v~~vD~~~~~~~~a~~~~~~~-~-~v~~~~~D 84 (244)
T 1qam_A 13 ITSKHNIDKIMTNIRLNEHDNIFEIGSGKGH--FTLELVQR----CNFVTAIEIDHKLCKTTENKLVDH-D-NFQVLNKD 84 (244)
T ss_dssp CCCHHHHHHHHTTCCCCTTCEEEEECCTTSH--HHHHHHHH----SSEEEEECSCHHHHHHHHHHTTTC-C-SEEEECCC
T ss_pred cCCHHHHHHHHHhCCCCCCCEEEEEeCCchH--HHHHHHHc----CCeEEEEECCHHHHHHHHHhhccC-C-CeEEEECh
Confidence 5566666555554555567899999999998 77777754 379999999999999999998754 2 38999999
Q ss_pred hHHH
Q 027409 104 AEEV 107 (223)
Q Consensus 104 A~ev 107 (223)
+.+.
T Consensus 85 ~~~~ 88 (244)
T 1qam_A 85 ILQF 88 (244)
T ss_dssp GGGC
T ss_pred HHhC
Confidence 9885
No 253
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.33 E-value=1.8e-06 Score=83.65 Aligned_cols=108 Identities=11% Similarity=0.029 Sum_probs=75.4
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhc--------CCCCcEEEEEeCCchHHHHHHHHHHh-------------hc-----
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAA--------RHTCARHVCIVPDERSRLAYVKAMYD-------------VV----- 93 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~--------~~~~g~i~TIE~d~e~~~~Ar~~~~~-------------a~----- 93 (223)
.++-+|+|+|.|+||...++|-+... ....-+++|+|.+|-..+..++.++. .+
T Consensus 57 ~~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~ 136 (689)
T 3pvc_A 57 QQSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLA 136 (689)
T ss_dssp SSEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCS
T ss_pred CCceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCC
Confidence 35679999999999965555543210 11124699999977666555543321 11
Q ss_pred C----------ceEEEEecchHHHhcCC-----CCccEEEEeCCCccc------HHHHHHh-ccCCCceEEEEeCC
Q 027409 94 G----------WVSEVIVRQAEEVMGEL-----KGVDFLVVDCTSKDF------ARVLRFA-RFSNKGAVLAFKNA 147 (223)
Q Consensus 94 G----------~~I~li~GdA~evL~~L-----~~fDfVFIDa~K~~Y------~~~f~~~-~~l~~GgvIV~DNv 147 (223)
| +.++++.|||.+.|+++ ..+|.+|+|+-+..+ .++|..+ +++++||.+.....
T Consensus 137 ~~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~~ 212 (689)
T 3pvc_A 137 GCHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTFTA 212 (689)
T ss_dssp EEEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEESCC
T ss_pred CceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEeccC
Confidence 1 23889999999999987 369999999988887 8888765 56699999887654
No 254
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.32 E-value=1.6e-06 Score=76.94 Aligned_cols=118 Identities=11% Similarity=-0.013 Sum_probs=79.3
Q ss_pred HHHHHH----HHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEecch
Q 027409 30 AELLSA----MAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVRQA 104 (223)
Q Consensus 30 g~fL~~----L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~GdA 104 (223)
-.||.- |+.-.+.++||+||||++..+.+..+|... .++++|+-+|.+|.+++.||+.+... +.. ++++.+|.
T Consensus 63 r~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~-~P~arVv~VD~sp~mLa~Ar~~l~~~-~~~~~~~v~aD~ 140 (277)
T 3giw_A 63 RDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSV-APESRVVYVDNDPIVLTLSQGLLAST-PEGRTAYVEADM 140 (277)
T ss_dssp HHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHH-CTTCEEEEEECCHHHHHTTHHHHCCC-SSSEEEEEECCT
T ss_pred HHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHH-CCCCEEEEEeCChHHHHHHHHHhccC-CCCcEEEEEecc
Confidence 455554 443457899999999973211344555333 34789999999999999999999876 544 99999999
Q ss_pred HHH---hcCC---CCcc-----EEEEeCCCccc------HHHHHH-hccCCCceEEEEeCCCC
Q 027409 105 EEV---MGEL---KGVD-----FLVVDCTSKDF------ARVLRF-ARFSNKGAVLAFKNAFQ 149 (223)
Q Consensus 105 ~ev---L~~L---~~fD-----fVFIDa~K~~Y------~~~f~~-~~~l~~GgvIV~DNvl~ 149 (223)
.+. |..- ..|| .|++-+--..- ..++.. ...|+|||.++......
T Consensus 141 ~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~ 203 (277)
T 3giw_A 141 LDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTA 203 (277)
T ss_dssp TCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECC
T ss_pred cChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccC
Confidence 763 3321 2355 36665532211 346654 46789999999887654
No 255
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.32 E-value=2.3e-06 Score=78.60 Aligned_cols=94 Identities=12% Similarity=0.008 Sum_probs=72.4
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcC--CC---------------------------------
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAAR--HT--------------------------------- 68 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~--~~--------------------------------- 68 (223)
.+.+..++.|-.++...+...||+.+||+|. ..|..|+.+. ++
T Consensus 184 pl~e~lAa~ll~l~~~~~~~~vlDp~CGSGt--~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~ 261 (393)
T 3k0b_A 184 PIKETMAAALVLLTSWHPDRPFYDPVCGSGT--IPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYD 261 (393)
T ss_dssp SCCHHHHHHHHHHSCCCTTSCEEETTCTTSH--HHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTT
T ss_pred CCcHHHHHHHHHHhCCCCCCeEEEcCCCCCH--HHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhccc
Confidence 4566666666666666667899999999997 4444443222 11
Q ss_pred -CcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCCCCccEEEEeC
Q 027409 69 -CARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGELKGVDFLVVDC 121 (223)
Q Consensus 69 -~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L~~fDfVFIDa 121 (223)
..+|+.+|+|+++++.|++|.+.+ |+. |+++.+|+.+.... ..||+|+.|-
T Consensus 262 ~~~~V~GvDid~~al~~Ar~Na~~~-gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NP 315 (393)
T 3k0b_A 262 QPLNIIGGDIDARLIEIAKQNAVEA-GLGDLITFRQLQVADFQTE-DEYGVVVANP 315 (393)
T ss_dssp CCCCEEEEESCHHHHHHHHHHHHHT-TCTTCSEEEECCGGGCCCC-CCSCEEEECC
T ss_pred CCceEEEEECCHHHHHHHHHHHHHc-CCCCceEEEECChHhCCCC-CCCCEEEECC
Confidence 257999999999999999999999 987 99999999985432 4799999994
No 256
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.32 E-value=1.3e-06 Score=76.74 Aligned_cols=106 Identities=14% Similarity=-0.008 Sum_probs=70.8
Q ss_pred CCCeEEEEccCcchHHHHHHH--HHhcCC-C-CcEEEEEeCCchHHHHHHHHHH--------------hhc--------C
Q 027409 41 NAKLIVEAWTHGGPITTSIGL--AIAARH-T-CARHVCIVPDERSRLAYVKAMY--------------DVV--------G 94 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~l--a~A~~~-~-~g~i~TIE~d~e~~~~Ar~~~~--------------~a~--------G 94 (223)
++.+|+++|||+|--+++|++ +..... . +.+|+.+|+|+++++.|+++.. +++ |
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 457999999999964445554 433221 1 3589999999999999998741 100 1
Q ss_pred -c--------eEEEEecchHHH-hcCCCCccEEEEeCC-----CcccHHHHHHh-ccCCCceEEEEeC
Q 027409 95 -W--------VSEVIVRQAEEV-MGELKGVDFLVVDCT-----SKDFARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 95 -~--------~I~li~GdA~ev-L~~L~~fDfVFIDa~-----K~~Y~~~f~~~-~~l~~GgvIV~DN 146 (223)
+ .|+|..+|..+. ++..++||+||.=.- ++...+.+..+ +.|+|||+++.-.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg~ 252 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAGH 252 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEECT
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEEe
Confidence 1 189999999872 221257999998421 12224556544 5679999998743
No 257
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.31 E-value=1.5e-06 Score=69.61 Aligned_cols=93 Identities=9% Similarity=0.010 Sum_probs=63.2
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCC-------CCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEE-ecchHHHh--
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARH-------TCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVI-VRQAEEVM-- 108 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~-------~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li-~GdA~evL-- 108 (223)
....+|||||||+|+ .++.++..... ++++|+.+|+++.. ... ++++ .+|+.+.-
T Consensus 21 ~~~~~vLDlGcG~G~--~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~------------~~~~~~~~~~~d~~~~~~~ 86 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGA--WSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF------------PLEGATFLCPADVTDPRTS 86 (196)
T ss_dssp CTTCEEEEETCCSCH--HHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC------------CCTTCEEECSCCTTSHHHH
T ss_pred CCCCEEEEeCCCCCH--HHHHHHHHhccccccccCCCceEEEEechhcc------------cCCCCeEEEeccCCCHHHH
Confidence 356799999999998 77777765321 12899999999842 233 7888 89865421
Q ss_pred ----cCC--CCccEEEEeCCCcc---c-----------HHHHHH-hccCCCceEEEEeC
Q 027409 109 ----GEL--KGVDFLVVDCTSKD---F-----------ARVLRF-ARFSNKGAVLAFKN 146 (223)
Q Consensus 109 ----~~L--~~fDfVFIDa~K~~---Y-----------~~~f~~-~~~l~~GgvIV~DN 146 (223)
..+ ..||+|+.|..... . ...++. .+.|+|||.+++-.
T Consensus 87 ~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 145 (196)
T 2nyu_A 87 QRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKT 145 (196)
T ss_dssp HHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence 112 37999999864221 1 355653 46779999998753
No 258
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.27 E-value=1.2e-06 Score=78.92 Aligned_cols=82 Identities=16% Similarity=0.092 Sum_probs=60.2
Q ss_pred cHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchH
Q 027409 26 ESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAE 105 (223)
Q Consensus 26 ~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~ 105 (223)
.+...+++..++...+..+|||+|||+|. .+++++... ..+.+|+.+|+|++.++.| . .++++.||+.
T Consensus 24 P~~l~~~~~~~~~~~~~~~vLD~gcGtG~--~~~~~~~~~-~~~~~i~gvDi~~~~~~~a-----~----~~~~~~~D~~ 91 (421)
T 2ih2_A 24 PPEVVDFMVSLAEAPRGGRVLEPACAHGP--FLRAFREAH-GTAYRFVGVEIDPKALDLP-----P----WAEGILADFL 91 (421)
T ss_dssp CHHHHHHHHHHCCCCTTCEEEEETCTTCH--HHHHHHHHH-CSCSEEEEEESCTTTCCCC-----T----TEEEEESCGG
T ss_pred CHHHHHHHHHhhccCCCCEEEECCCCChH--HHHHHHHHh-CCCCeEEEEECCHHHHHhC-----C----CCcEEeCChh
Confidence 45566666665554456799999999997 666665432 2357999999999998777 2 2799999998
Q ss_pred HHhcCCCCccEEEEe
Q 027409 106 EVMGELKGVDFLVVD 120 (223)
Q Consensus 106 evL~~L~~fDfVFID 120 (223)
+..+. +.||+|+.+
T Consensus 92 ~~~~~-~~fD~Ii~N 105 (421)
T 2ih2_A 92 LWEPG-EAFDLILGN 105 (421)
T ss_dssp GCCCS-SCEEEEEEC
T ss_pred hcCcc-CCCCEEEEC
Confidence 75432 479999994
No 259
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.27 E-value=5.3e-06 Score=75.87 Aligned_cols=95 Identities=16% Similarity=0.047 Sum_probs=71.1
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcC--C----------------------------------
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAAR--H---------------------------------- 67 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~--~---------------------------------- 67 (223)
.+.+..++.|-.++...+-..||+.+||+|. ..+..|+.+. +
T Consensus 178 pl~e~lAa~ll~~~~~~~~~~vlDp~CGSGt--~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~ 255 (385)
T 3ldu_A 178 PIRETLAAGLIYLTPWKAGRVLVDPMCGSGT--ILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNE 255 (385)
T ss_dssp CCCHHHHHHHHHTSCCCTTSCEEETTCTTCH--HHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCS
T ss_pred CCcHHHHHHHHHhhCCCCCCeEEEcCCCCCH--HHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhcc
Confidence 3455555555445444556789999999997 5554443321 1
Q ss_pred CCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCCCCccEEEEeCC
Q 027409 68 TCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGELKGVDFLVVDCT 122 (223)
Q Consensus 68 ~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L~~fDfVFIDa~ 122 (223)
...+|+.+|+|+++++.|++|.+.+ |+. |++..+|+.+.... ..||+|+.|--
T Consensus 256 ~~~~V~GvDid~~ai~~Ar~Na~~~-gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPP 310 (385)
T 3ldu_A 256 SKFKIYGYDIDEESIDIARENAEIA-GVDEYIEFNVGDATQFKSE-DEFGFIITNPP 310 (385)
T ss_dssp CCCCEEEEESCHHHHHHHHHHHHHH-TCGGGEEEEECCGGGCCCS-CBSCEEEECCC
T ss_pred CCceEEEEECCHHHHHHHHHHHHHc-CCCCceEEEECChhhcCcC-CCCcEEEECCC
Confidence 2268999999999999999999999 986 99999999985432 47999999864
No 260
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.25 E-value=4.2e-06 Score=73.43 Aligned_cols=107 Identities=7% Similarity=-0.053 Sum_probs=75.5
Q ss_pred HHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcC
Q 027409 31 ELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGE 110 (223)
Q Consensus 31 ~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~ 110 (223)
.|-..+...-.|.+||+||||+|- .++.+ + ++.+++.+|+|+.+.+.+++++... |...++..+|.....+.
T Consensus 95 ~fY~~i~~~~~p~~VLDlGCG~gp--Lal~~----~-~~~~y~a~DId~~~i~~ar~~~~~~-g~~~~~~v~D~~~~~~~ 166 (253)
T 3frh_A 95 TLYDFIFSAETPRRVLDIACGLNP--LALYE----R-GIASVWGCDIHQGLGDVITPFAREK-DWDFTFALQDVLCAPPA 166 (253)
T ss_dssp HHHHHHTSSCCCSEEEEETCTTTH--HHHHH----T-TCSEEEEEESBHHHHHHHHHHHHHT-TCEEEEEECCTTTSCCC
T ss_pred HHHHHHhcCCCCCeEEEecCCccH--HHHHh----c-cCCeEEEEeCCHHHHHHHHHHHHhc-CCCceEEEeecccCCCC
Confidence 344444444679999999999986 44433 2 5789999999999999999999998 97799999998764432
Q ss_pred CCCccEEEEe-C----CCcccHHHHHHhccCCCceEEEEeC
Q 027409 111 LKGVDFLVVD-C----TSKDFARVLRFARFSNKGAVLAFKN 146 (223)
Q Consensus 111 L~~fDfVFID-a----~K~~Y~~~f~~~~~l~~GgvIV~DN 146 (223)
++||.|++= . +..+=...|+.+.-+++++++|+=.
T Consensus 167 -~~~DvvLllk~lh~LE~q~~~~~~~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 167 -EAGDLALIFKLLPLLEREQAGSAMALLQSLNTPRMAVSFP 206 (253)
T ss_dssp -CBCSEEEEESCHHHHHHHSTTHHHHHHHHCBCSEEEEEEE
T ss_pred -CCcchHHHHHHHHHhhhhchhhHHHHHHHhcCCCEEEEcC
Confidence 389999653 1 0111112335555666777777655
No 261
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.22 E-value=1.6e-06 Score=74.75 Aligned_cols=89 Identities=16% Similarity=-0.004 Sum_probs=63.7
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecc
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQ 103 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~Gd 103 (223)
.+++...+-+...+......+|||||||+|. .|..|+. . ..++++.||+|+++++.++++ . ...++++.||
T Consensus 14 l~d~~i~~~iv~~~~~~~~~~VLDiG~G~G~--lt~~L~~--~-~~~~v~avEid~~~~~~~~~~---~-~~~v~~i~~D 84 (249)
T 3ftd_A 14 LVSEGVLKKIAEELNIEEGNTVVEVGGGTGN--LTKVLLQ--H-PLKKLYVIELDREMVENLKSI---G-DERLEVINED 84 (249)
T ss_dssp EECHHHHHHHHHHTTCCTTCEEEEEESCHHH--HHHHHTT--S-CCSEEEEECCCHHHHHHHTTS---C-CTTEEEECSC
T ss_pred cCCHHHHHHHHHhcCCCCcCEEEEEcCchHH--HHHHHHH--c-CCCeEEEEECCHHHHHHHHhc---c-CCCeEEEEcc
Confidence 4566666666555556667899999999997 7777753 2 247999999999999999988 3 3348999999
Q ss_pred hHHH-hcCCCCccEEEEeC
Q 027409 104 AEEV-MGELKGVDFLVVDC 121 (223)
Q Consensus 104 A~ev-L~~L~~fDfVFIDa 121 (223)
+++. ++++.....|+-+-
T Consensus 85 ~~~~~~~~~~~~~~vv~Nl 103 (249)
T 3ftd_A 85 ASKFPFCSLGKELKVVGNL 103 (249)
T ss_dssp TTTCCGGGSCSSEEEEEEC
T ss_pred hhhCChhHccCCcEEEEEC
Confidence 9885 45442222444443
No 262
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.21 E-value=1.2e-06 Score=75.80 Aligned_cols=75 Identities=8% Similarity=-0.087 Sum_probs=55.8
Q ss_pred CcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecch
Q 027409 25 KESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQA 104 (223)
Q Consensus 25 i~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA 104 (223)
++|...+.+-..+....-.+|||||||+|+ .|. ++.+ ..++|+.+|+|+++++.|+++++.. + .++++.||+
T Consensus 5 ~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~--lt~-l~~~---~~~~v~avEid~~~~~~a~~~~~~~-~-~v~~i~~D~ 76 (252)
T 1qyr_A 5 NDQFVIDSIVSAINPQKGQAMVEIGPGLAA--LTE-PVGE---RLDQLTVIELDRDLAARLQTHPFLG-P-KLTIYQQDA 76 (252)
T ss_dssp CCHHHHHHHHHHHCCCTTCCEEEECCTTTT--THH-HHHT---TCSCEEEECCCHHHHHHHHTCTTTG-G-GEEEECSCG
T ss_pred CCHHHHHHHHHhcCCCCcCEEEEECCCCcH--HHH-hhhC---CCCeEEEEECCHHHHHHHHHHhccC-C-ceEEEECch
Confidence 456665555555555566789999999998 666 5421 1234999999999999999988653 2 389999999
Q ss_pred HHH
Q 027409 105 EEV 107 (223)
Q Consensus 105 ~ev 107 (223)
++.
T Consensus 77 ~~~ 79 (252)
T 1qyr_A 77 MTF 79 (252)
T ss_dssp GGC
T ss_pred hhC
Confidence 884
No 263
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.20 E-value=7e-07 Score=80.90 Aligned_cols=104 Identities=17% Similarity=0.091 Sum_probs=70.9
Q ss_pred HHHHHHHHHhc---CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EE-EEecc
Q 027409 30 AELLSAMAAGW---NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SE-VIVRQ 103 (223)
Q Consensus 30 g~fL~~L~~~~---~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~-li~Gd 103 (223)
.++...++... ...+|||||||.|+ .+..|+.. +.+++.+|+++++++.|++. |+. .. +..++
T Consensus 93 ~~~~~~l~~~~~~~~~~~VLDiGcG~G~--~~~~l~~~----g~~v~gvD~s~~~~~~a~~~-----~~~~~~~~~~~~~ 161 (416)
T 4e2x_A 93 AMLARDFLATELTGPDPFIVEIGCNDGI--MLRTIQEA----GVRHLGFEPSSGVAAKAREK-----GIRVRTDFFEKAT 161 (416)
T ss_dssp HHHHHHHHHTTTCSSSCEEEEETCTTTT--THHHHHHT----TCEEEEECCCHHHHHHHHTT-----TCCEECSCCSHHH
T ss_pred HHHHHHHHHHhCCCCCCEEEEecCCCCH--HHHHHHHc----CCcEEEECCCHHHHHHHHHc-----CCCcceeeechhh
Confidence 34444444444 45699999999998 66666542 56999999999999998875 333 22 23344
Q ss_pred hHHHhcC-CCCccEEEEeCCCc---ccHHHHHHh-ccCCCceEEEEe
Q 027409 104 AEEVMGE-LKGVDFLVVDCTSK---DFARVLRFA-RFSNKGAVLAFK 145 (223)
Q Consensus 104 A~evL~~-L~~fDfVFIDa~K~---~Y~~~f~~~-~~l~~GgvIV~D 145 (223)
+ +.++. -+.||+|+.-..-+ +...+|..+ +.|+|||+++..
T Consensus 162 ~-~~l~~~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~ 207 (416)
T 4e2x_A 162 A-DDVRRTEGPANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFE 207 (416)
T ss_dssp H-HHHHHHHCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred H-hhcccCCCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEE
Confidence 4 33432 15899999886543 345667654 677999999986
No 264
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.16 E-value=1.1e-05 Score=73.90 Aligned_cols=93 Identities=14% Similarity=0.042 Sum_probs=71.1
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcC--C----------------------------------
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAAR--H---------------------------------- 67 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~--~---------------------------------- 67 (223)
.+.+..++.|-.++.-.+-..+|+.+||+|. ..|..|+.+. +
T Consensus 177 pl~e~LAaall~l~~~~~~~~llDp~CGSGt--~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~ 254 (384)
T 3ldg_A 177 PIKENMAAAIILLSNWFPDKPFVDPTCGSGT--FCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYD 254 (384)
T ss_dssp CCCHHHHHHHHHHTTCCTTSCEEETTCTTSH--HHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTT
T ss_pred CCcHHHHHHHHHHhCCCCCCeEEEeCCcCCH--HHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhcc
Confidence 4555666666556555666899999999997 4444433222 1
Q ss_pred CCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCCCCccEEEEe
Q 027409 68 TCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGELKGVDFLVVD 120 (223)
Q Consensus 68 ~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L~~fDfVFID 120 (223)
...+|+.+|+|+++++.|++|.+.+ |+. |+++.+|+.+.... ..||+|+.|
T Consensus 255 ~~~~v~GvDid~~al~~Ar~Na~~~-gl~~~I~~~~~D~~~l~~~-~~fD~Iv~N 307 (384)
T 3ldg_A 255 IQLDISGFDFDGRMVEIARKNAREV-GLEDVVKLKQMRLQDFKTN-KINGVLISN 307 (384)
T ss_dssp CCCCEEEEESCHHHHHHHHHHHHHT-TCTTTEEEEECCGGGCCCC-CCSCEEEEC
T ss_pred CCceEEEEECCHHHHHHHHHHHHHc-CCCCceEEEECChHHCCcc-CCcCEEEEC
Confidence 1257999999999999999999999 987 99999999985432 479999999
No 265
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.12 E-value=4.7e-06 Score=74.04 Aligned_cols=118 Identities=8% Similarity=-0.064 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHh-cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHH
Q 027409 28 GVAELLSAMAAG-WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEE 106 (223)
Q Consensus 28 ~~g~fL~~L~~~-~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~e 106 (223)
.--.|...+... -.|.+||+||||.|- .++.++ ...+..+++.+|+|+.+.+.+++|+... |+..++...|-..
T Consensus 118 ~lD~fY~~i~~~i~~p~~VLDLGCG~Gp--LAl~~~--~~~p~a~y~a~DId~~~le~a~~~l~~~-g~~~~~~v~D~~~ 192 (281)
T 3lcv_B 118 HLDEFYRELFRHLPRPNTLRDLACGLNP--LAAPWM--GLPAETVYIASDIDARLVGFVDEALTRL-NVPHRTNVADLLE 192 (281)
T ss_dssp GHHHHHHHHGGGSCCCSEEEETTCTTGG--GCCTTT--TCCTTCEEEEEESBHHHHHHHHHHHHHT-TCCEEEEECCTTT
T ss_pred hHHHHHHHHHhccCCCceeeeeccCccH--HHHHHH--hhCCCCEEEEEeCCHHHHHHHHHHHHhc-CCCceEEEeeecc
Confidence 344555555544 459999999999997 554443 2346789999999999999999999999 9998888888765
Q ss_pred HhcCCCCccEEEEeCC-----CcccHHHHHHhccCCCceEEEEeCC--CCCC
Q 027409 107 VMGELKGVDFLVVDCT-----SKDFARVLRFARFSNKGAVLAFKNA--FQRS 151 (223)
Q Consensus 107 vL~~L~~fDfVFIDa~-----K~~Y~~~f~~~~~l~~GgvIV~DNv--l~~g 151 (223)
..+. .+||++++==- .++=..-|+++.-+++||++|.=.. +.+.
T Consensus 193 ~~p~-~~~DvaL~lkti~~Le~q~kg~g~~ll~aL~~~~vvVSfp~ksl~Gr 243 (281)
T 3lcv_B 193 DRLD-EPADVTLLLKTLPCLETQQRGSGWEVIDIVNSPNIVVTFPTKSLGQR 243 (281)
T ss_dssp SCCC-SCCSEEEETTCHHHHHHHSTTHHHHHHHHSSCSEEEEEEECC-----
T ss_pred cCCC-CCcchHHHHHHHHHhhhhhhHHHHHHHHHhCCCCEEEeccchhhcCC
Confidence 4332 47999976311 1111233456666788888887666 5443
No 266
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.10 E-value=2.9e-06 Score=75.40 Aligned_cols=96 Identities=8% Similarity=-0.022 Sum_probs=68.0
Q ss_pred hcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCCCCccEEE
Q 027409 39 GWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGELKGVDFLV 118 (223)
Q Consensus 39 ~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L~~fDfVF 118 (223)
..+..+|||||||+|. .+..++... ++.+++.+|+ +++++.|+++ . + |+++.||+.+-++ .||+|+
T Consensus 186 ~~~~~~vlDvG~G~G~--~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~---~-~--v~~~~~d~~~~~p---~~D~v~ 251 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGT--TAKIICETF--PKLKCIVFDR-PQVVENLSGS---N-N--LTYVGGDMFTSIP---NADAVL 251 (352)
T ss_dssp HTTCSEEEEETCTTSH--HHHHHHHHC--TTCEEEEEEC-HHHHTTCCCB---T-T--EEEEECCTTTCCC---CCSEEE
T ss_pred cccCceEEEeCCCccH--HHHHHHHHC--CCCeEEEeeC-HHHHhhcccC---C-C--cEEEeccccCCCC---CccEEE
Confidence 3467899999999998 677776543 4679999999 9888777651 2 2 8999999977433 499999
Q ss_pred EeCCCc-----ccHHHHHHh-ccCCC---ceEE-EEeCCC
Q 027409 119 VDCTSK-----DFARVLRFA-RFSNK---GAVL-AFKNAF 148 (223)
Q Consensus 119 IDa~K~-----~Y~~~f~~~-~~l~~---GgvI-V~DNvl 148 (223)
+-.--. ....++..+ +.++| ||.+ |.|.++
T Consensus 252 ~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~ 291 (352)
T 1fp2_A 252 LKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVI 291 (352)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEE
T ss_pred eehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeec
Confidence 854322 233667655 55677 8855 555554
No 267
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.09 E-value=7.1e-07 Score=78.33 Aligned_cols=94 Identities=14% Similarity=0.032 Sum_probs=63.1
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHH-HH--hhcCceEEEE--ecchHHHhcCCCCcc
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKA-MY--DVVGWVSEVI--VRQAEEVMGELKGVD 115 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~-~~--~a~G~~I~li--~GdA~evL~~L~~fD 115 (223)
.-++||++|||+|. .+..+|. . ++|+.||+++ +...|++. .. .. |..|+++ .||+.+ |+ -++||
T Consensus 82 ~g~~VLDlGcGtG~--~s~~la~--~---~~V~gVD~s~-m~~~a~~~~~~~~~~-~~~v~~~~~~~D~~~-l~-~~~fD 150 (276)
T 2wa2_A 82 LKGTVVDLGCGRGS--WSYYAAS--Q---PNVREVKAYT-LGTSGHEKPRLVETF-GWNLITFKSKVDVTK-ME-PFQAD 150 (276)
T ss_dssp CCEEEEEESCTTCH--HHHHHHT--S---TTEEEEEEEC-CCCTTSCCCCCCCCT-TGGGEEEECSCCGGG-CC-CCCCS
T ss_pred CCCEEEEeccCCCH--HHHHHHH--c---CCEEEEECch-hhhhhhhchhhhhhc-CCCeEEEeccCcHhh-CC-CCCcC
Confidence 34689999999997 6666652 2 7899999998 43333322 11 12 3348899 999887 44 24799
Q ss_pred EEEEeCCCcc--------c--HHHHHHh-ccCCCce--EEEEeC
Q 027409 116 FLVVDCTSKD--------F--ARVLRFA-RFSNKGA--VLAFKN 146 (223)
Q Consensus 116 fVFIDa~K~~--------Y--~~~f~~~-~~l~~Gg--vIV~DN 146 (223)
+|+.|.. .. + ...++.+ +.|+||| .++++.
T Consensus 151 ~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~ 193 (276)
T 2wa2_A 151 TVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKV 193 (276)
T ss_dssp EEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEE
T ss_pred EEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEe
Confidence 9999976 11 1 1245544 6679999 877753
No 268
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.08 E-value=8.5e-07 Score=77.31 Aligned_cols=111 Identities=14% Similarity=0.094 Sum_probs=69.8
Q ss_pred CCcHHHHHHHHHHHH--hcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHH-H--HhhcCceEE
Q 027409 24 IKESGVAELLSAMAA--GWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKA-M--YDVVGWVSE 98 (223)
Q Consensus 24 ii~p~~g~fL~~L~~--~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~-~--~~a~G~~I~ 98 (223)
-++...-.+..++-+ ....++||++|||+|. .+..+|. . ++|+.||+++ +...|++. . +.. |..|+
T Consensus 55 ~~sR~a~KL~~i~~~~~~~~g~~VLDlGcGtG~--~s~~la~--~---~~V~gvD~s~-m~~~a~~~~~~~~~~-~~~v~ 125 (265)
T 2oxt_A 55 SVSRGTAKLAWMEERGYVELTGRVVDLGCGRGG--WSYYAAS--R---PHVMDVRAYT-LGVGGHEVPRITESY-GWNIV 125 (265)
T ss_dssp CSSTHHHHHHHHHHHTSCCCCEEEEEESCTTSH--HHHHHHT--S---TTEEEEEEEC-CCCSSCCCCCCCCBT-TGGGE
T ss_pred ccchHHHHHHHHHHcCCCCCCCEEEEeCcCCCH--HHHHHHH--c---CcEEEEECch-hhhhhhhhhhhhhcc-CCCeE
Confidence 345544444444443 2234689999999996 6656542 2 7899999998 43333221 1 122 33478
Q ss_pred EE--ecchHHHhcCCCCccEEEEeCCCcc---c----H---HHHHHh-ccCCCce--EEEEeC
Q 027409 99 VI--VRQAEEVMGELKGVDFLVVDCTSKD---F----A---RVLRFA-RFSNKGA--VLAFKN 146 (223)
Q Consensus 99 li--~GdA~evL~~L~~fDfVFIDa~K~~---Y----~---~~f~~~-~~l~~Gg--vIV~DN 146 (223)
++ .||+.+ |+ -+.||+|+.|.. .. + . ..++.+ +.|+||| .++++-
T Consensus 126 ~~~~~~D~~~-l~-~~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv 185 (265)
T 2oxt_A 126 KFKSRVDIHT-LP-VERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKV 185 (265)
T ss_dssp EEECSCCTTT-SC-CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred EEecccCHhH-CC-CCCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEe
Confidence 99 999887 34 247999999976 21 1 1 255544 6679999 888754
No 269
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.06 E-value=6.4e-06 Score=73.12 Aligned_cols=91 Identities=13% Similarity=0.015 Sum_probs=60.6
Q ss_pred cCCCeEEEEccCcch---HHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEE-EecchHHHhcCCCCcc
Q 027409 40 WNAKLIVEAWTHGGP---ITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEV-IVRQAEEVMGELKGVD 115 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gy---s~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~l-i~GdA~evL~~L~~fD 115 (223)
....+|||+|||.|+ .++ ..++. ..+++++|+.+|++++ + . + +++ +.||+.+. +--+.||
T Consensus 62 ~~g~~VLDLGcGsg~~~GpGs-~~~a~-~~~~~~~V~gvDis~~--------v--~-~--v~~~i~gD~~~~-~~~~~fD 125 (290)
T 2xyq_A 62 PYNMRVIHFGAGSDKGVAPGT-AVLRQ-WLPTGTLLVDSDLNDF--------V--S-D--ADSTLIGDCATV-HTANKWD 125 (290)
T ss_dssp CTTCEEEEESCCCTTSBCHHH-HHHHH-HSCTTCEEEEEESSCC--------B--C-S--SSEEEESCGGGC-CCSSCEE
T ss_pred CCCCEEEEeCCCCCCCCCcHH-HHHHH-HcCCCCEEEEEECCCC--------C--C-C--CEEEEECccccC-CccCccc
Confidence 345699999995521 123 23332 2445789999999998 1 2 2 577 99999873 2115799
Q ss_pred EEEEeCCCc--------------ccHHHHHHh-ccCCCceEEEEeC
Q 027409 116 FLVVDCTSK--------------DFARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 116 fVFIDa~K~--------------~Y~~~f~~~-~~l~~GgvIV~DN 146 (223)
+|+.|.... .+.+.++.+ +.|+|||.+++.-
T Consensus 126 ~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~ 171 (290)
T 2xyq_A 126 LIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKI 171 (290)
T ss_dssp EEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 999986532 133566644 6789999999864
No 270
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.04 E-value=5.7e-06 Score=74.11 Aligned_cols=95 Identities=6% Similarity=-0.035 Sum_probs=67.3
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCCCCccEEEE
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGELKGVDFLVV 119 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L~~fDfVFI 119 (223)
.+..+|||||||+|. .+..++... ++.+++.+|+ +++++.|+++ . + |+++.||+.+-++ .||+|++
T Consensus 208 ~~~~~vLDvG~G~G~--~~~~l~~~~--~~~~~~~~D~-~~~~~~a~~~---~-~--v~~~~~d~~~~~~---~~D~v~~ 273 (372)
T 1fp1_D 208 EGISTLVDVGGGSGR--NLELIISKY--PLIKGINFDL-PQVIENAPPL---S-G--IEHVGGDMFASVP---QGDAMIL 273 (372)
T ss_dssp TTCSEEEEETCTTSH--HHHHHHHHC--TTCEEEEEEC-HHHHTTCCCC---T-T--EEEEECCTTTCCC---CEEEEEE
T ss_pred CCCCEEEEeCCCCcH--HHHHHHHHC--CCCeEEEeCh-HHHHHhhhhc---C-C--CEEEeCCcccCCC---CCCEEEE
Confidence 357899999999998 677777543 4678999999 8888776641 1 1 8999999987333 4999998
Q ss_pred eCCCccc-----HHHHHHh-ccCCCceEEEE-eCCC
Q 027409 120 DCTSKDF-----ARVLRFA-RFSNKGAVLAF-KNAF 148 (223)
Q Consensus 120 Da~K~~Y-----~~~f~~~-~~l~~GgvIV~-DNvl 148 (223)
-.--.+. ..++..+ +.++|||.++. |.++
T Consensus 274 ~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~ 309 (372)
T 1fp1_D 274 KAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFIL 309 (372)
T ss_dssp ESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred ecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEecc
Confidence 6543322 3666654 56788886654 4443
No 271
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=98.04 E-value=4e-05 Score=68.89 Aligned_cols=106 Identities=11% Similarity=-0.013 Sum_probs=68.4
Q ss_pred cCCCeEEEEccCcchHHHHHHH-HHhcCCCCcE--EEEEeCCch---------HHHHHHHHHHhh---cC--ceEEEEec
Q 027409 40 WNAKLIVEAWTHGGPITTSIGL-AIAARHTCAR--HVCIVPDER---------SRLAYVKAMYDV---VG--WVSEVIVR 102 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~l-a~A~~~~~g~--i~TIE~d~e---------~~~~Ar~~~~~a---~G--~~I~li~G 102 (223)
...=+|||+|-|+|+...+.|. +... .+..+ .+++|.++- ..+.+...+... -+ +..++..|
T Consensus 95 ~~~~~IlE~GFGTGLNfl~t~~~~~~~-~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~G 173 (308)
T 3vyw_A 95 RKVIRILDVGFGLGYNLAVALKHLWEV-NPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLG 173 (308)
T ss_dssp CSEEEEEEECCTTSHHHHHHHHHHHHH-CTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEES
T ss_pred CCCcEEEEeCCCccHHHHHHHHHHHHh-CCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEec
Confidence 3445799999999996443332 2222 33455 577886431 233344444432 01 12788999
Q ss_pred chHHHhcCCC--CccEEEEeCC-C----ccc-HHHHHHh-ccCCCceEEEEeC
Q 027409 103 QAEEVMGELK--GVDFLVVDCT-S----KDF-ARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 103 dA~evL~~L~--~fDfVFIDa~-K----~~Y-~~~f~~~-~~l~~GgvIV~DN 146 (223)
||.+.|+++. .||.+|.|+- + +.+ .++|..+ +.++|||++++--
T Consensus 174 Da~~~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laTYt 226 (308)
T 3vyw_A 174 DARKRIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVSYS 226 (308)
T ss_dssp CHHHHGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEESC
T ss_pred hHHHHHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEEEe
Confidence 9999999984 6999999983 2 233 5677655 5679999998743
No 272
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.02 E-value=2.8e-06 Score=75.43 Aligned_cols=109 Identities=15% Similarity=0.062 Sum_probs=69.6
Q ss_pred CcHHHHHHHHHHHH-hcCC-CeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeC----CchHHHHHHHHHHhhcCce-E
Q 027409 25 KESGVAELLSAMAA-GWNA-KLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVP----DERSRLAYVKAMYDVVGWV-S 97 (223)
Q Consensus 25 i~p~~g~fL~~L~~-~~~a-k~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~----d~e~~~~Ar~~~~~a~G~~-I 97 (223)
.+...-.++.++-+ ..+| ++||++|||.|. .|..+|. . |+|+.+|. .+.+.+.+ ..+.. |.. |
T Consensus 64 ~sR~a~KL~~i~~~~~~~~g~~VLDlGcG~G~--~s~~la~--~---~~V~gvD~~~~~~~~~~~~~--~~~~~-~~~~v 133 (305)
T 2p41_A 64 VSRGSAKLRWFVERNLVTPEGKVVDLGCGRGG--WSYYCGG--L---KNVREVKGLTKGGPGHEEPI--PMSTY-GWNLV 133 (305)
T ss_dssp SSTHHHHHHHHHHTTSSCCCEEEEEETCTTSH--HHHHHHT--S---TTEEEEEEECCCSTTSCCCC--CCCST-TGGGE
T ss_pred cccHHHHHHHHHHcCCCCCCCEEEEEcCCCCH--HHHHHHh--c---CCEEEEeccccCchhHHHHH--Hhhhc-CCCCe
Confidence 44444455544443 2243 799999999997 6666653 2 68999998 44332111 11233 445 9
Q ss_pred EEEec-chHHHhcCCCCccEEEEeCCCc--cc----H---HHHHHh-ccCCCceEEEEe
Q 027409 98 EVIVR-QAEEVMGELKGVDFLVVDCTSK--DF----A---RVLRFA-RFSNKGAVLAFK 145 (223)
Q Consensus 98 ~li~G-dA~evL~~L~~fDfVFIDa~K~--~Y----~---~~f~~~-~~l~~GgvIV~D 145 (223)
+++.| |+.+. + ..+||+|+.|+.-. ++ . ..|..+ +.|+|||.++++
T Consensus 134 ~~~~~~D~~~l-~-~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~k 190 (305)
T 2p41_A 134 RLQSGVDVFFI-P-PERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVK 190 (305)
T ss_dssp EEECSCCTTTS-C-CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred EEEeccccccC-C-cCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 99999 88763 2 24799999998642 21 1 345444 678999999985
No 273
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.02 E-value=6.6e-06 Score=73.21 Aligned_cols=96 Identities=6% Similarity=-0.003 Sum_probs=67.3
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCCCCccEEEE
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGELKGVDFLVV 119 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L~~fDfVFI 119 (223)
.+..+|||||||+|. .+..++... ++.+++.+|. ++.++.|++. . + |+++.||..+- +..||+|++
T Consensus 192 ~~~~~vlDvG~G~G~--~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~---~-~--v~~~~~d~~~~---~~~~D~v~~ 257 (358)
T 1zg3_A 192 EGLESLVDVGGGTGG--VTKLIHEIF--PHLKCTVFDQ-PQVVGNLTGN---E-N--LNFVGGDMFKS---IPSADAVLL 257 (358)
T ss_dssp HTCSEEEEETCTTSH--HHHHHHHHC--TTSEEEEEEC-HHHHSSCCCC---S-S--EEEEECCTTTC---CCCCSEEEE
T ss_pred cCCCEEEEECCCcCH--HHHHHHHHC--CCCeEEEecc-HHHHhhcccC---C-C--cEEEeCccCCC---CCCceEEEE
Confidence 467899999999998 677776543 4678999999 7777666541 2 2 89999999873 335999998
Q ss_pred eCCCcc-----cHHHHHHh-ccCCC---ce-EEEEeCCCC
Q 027409 120 DCTSKD-----FARVLRFA-RFSNK---GA-VLAFKNAFQ 149 (223)
Q Consensus 120 Da~K~~-----Y~~~f~~~-~~l~~---Gg-vIV~DNvl~ 149 (223)
-.--.+ ...++..+ +.++| || ++|.|.++.
T Consensus 258 ~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~ 297 (358)
T 1zg3_A 258 KWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISID 297 (358)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEEC
T ss_pred cccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccC
Confidence 643322 34666655 56787 88 555565543
No 274
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.01 E-value=1e-05 Score=72.86 Aligned_cols=96 Identities=8% Similarity=-0.039 Sum_probs=67.1
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCCCCccEEEE
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGELKGVDFLVV 119 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L~~fDfVFI 119 (223)
.+.++|||||||+|. .++.++... ++.+++.+|+ |+.++.|+++ -.|+++.||..+-++ +. |+|++
T Consensus 202 ~~~~~vlDvG~G~G~--~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~------~~v~~~~~d~~~~~p--~~-D~v~~ 267 (368)
T 3reo_A 202 EGLTTIVDVGGGTGA--VASMIVAKY--PSINAINFDL-PHVIQDAPAF------SGVEHLGGDMFDGVP--KG-DAIFI 267 (368)
T ss_dssp TTCSEEEEETCTTSH--HHHHHHHHC--TTCEEEEEEC-HHHHTTCCCC------TTEEEEECCTTTCCC--CC-SEEEE
T ss_pred cCCCEEEEeCCCcCH--HHHHHHHhC--CCCEEEEEeh-HHHHHhhhhc------CCCEEEecCCCCCCC--CC-CEEEE
Confidence 346899999999998 777777543 4678999999 8877666532 128999999987444 24 99998
Q ss_pred eCCCc-----ccHHHHHHh-ccCCCceEE-EEeCCCC
Q 027409 120 DCTSK-----DFARVLRFA-RFSNKGAVL-AFKNAFQ 149 (223)
Q Consensus 120 Da~K~-----~Y~~~f~~~-~~l~~GgvI-V~DNvl~ 149 (223)
-.--. +..+++..+ +.|+|||.+ |.|.++.
T Consensus 268 ~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 304 (368)
T 3reo_A 268 KWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILP 304 (368)
T ss_dssp ESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCC
T ss_pred echhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 65433 334667655 567888855 5555554
No 275
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=97.97 E-value=9.8e-06 Score=74.88 Aligned_cols=123 Identities=9% Similarity=-0.023 Sum_probs=84.9
Q ss_pred CcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCC-----------CCcEEEEEeCCchHHHHHHHHHHhhc
Q 027409 25 KESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARH-----------TCARHVCIVPDERSRLAYVKAMYDVV 93 (223)
Q Consensus 25 i~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~-----------~~g~i~TIE~d~e~~~~Ar~~~~~a~ 93 (223)
.++++.++|.-++......+||+.|||+|. ..+.++..... ....++.+|+|+..++.|+.|+...
T Consensus 155 TP~~v~~~mv~~l~~~~~~~VlDpacGsG~--fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~- 231 (445)
T 2okc_A 155 TPRPLIQAMVDCINPQMGETVCDPACGTGG--FLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLH- 231 (445)
T ss_dssp CCHHHHHHHHHHHCCCTTCCEEETTCTTCH--HHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHT-
T ss_pred CcHHHHHHHHHHhCCCCCCEEeccCCCcch--HHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHh-
Confidence 345567776666655555699999999996 55555433211 2357999999999999999999887
Q ss_pred Cc---eEEEEecchHHHhcCCCCccEEEEeCC------------Ccc--------cHHHHHH-hccCCCceEE---EEeC
Q 027409 94 GW---VSEVIVRQAEEVMGELKGVDFLVVDCT------------SKD--------FARVLRF-ARFSNKGAVL---AFKN 146 (223)
Q Consensus 94 G~---~I~li~GdA~evL~~L~~fDfVFIDa~------------K~~--------Y~~~f~~-~~~l~~GgvI---V~DN 146 (223)
|+ .++++.||++..... ..||+|+.+-- +.. +..+++. ++.|++||.+ +.++
T Consensus 232 g~~~~~~~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~~ 310 (445)
T 2okc_A 232 GIGTDRSPIVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPDN 310 (445)
T ss_dssp TCCSSCCSEEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHH
T ss_pred CCCcCCCCEeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECCc
Confidence 87 488999999874322 47999998621 111 1356664 4667888754 4566
Q ss_pred CCCCC
Q 027409 147 AFQRS 151 (223)
Q Consensus 147 vl~~g 151 (223)
+++++
T Consensus 311 ~L~~~ 315 (445)
T 2okc_A 311 VLFEA 315 (445)
T ss_dssp HHHCS
T ss_pred ccccC
Confidence 77655
No 276
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.96 E-value=2e-05 Score=77.43 Aligned_cols=94 Identities=12% Similarity=0.021 Sum_probs=71.3
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcC--C----------------------------------
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAAR--H---------------------------------- 67 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~--~---------------------------------- 67 (223)
.+.+..++.|-.++.-.....||+.+||+|. ..|..|+.+. +
T Consensus 173 pl~e~LAa~ll~~~~~~~~~~llDP~CGSGt--~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~ 250 (703)
T 3v97_A 173 PIKETLAAAIVMRSGWQPGTPLLDPMCGSGT--LLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARK 250 (703)
T ss_dssp SSCHHHHHHHHHHTTCCTTSCEEETTCTTSH--HHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHhhCCCCCCeEEecCCCCcH--HHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhh
Confidence 4556666666555555566799999999997 4444433221 1
Q ss_pred ----CCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCC-C-CccEEEEe
Q 027409 68 ----TCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGEL-K-GVDFLVVD 120 (223)
Q Consensus 68 ----~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L-~-~fDfVFID 120 (223)
+..+|+.+|+|+++++.|+.|.+.+ |+. |+|..||+.+..+.. . .||+|+.+
T Consensus 251 ~~~~~~~~i~G~Did~~av~~A~~N~~~a-gv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~N 310 (703)
T 3v97_A 251 GLAEYSSHFYGSDSDARVIQRARTNARLA-GIGELITFEVKDVAQLTNPLPKGPYGTVLSN 310 (703)
T ss_dssp HHHHCCCCEEEEESCHHHHHHHHHHHHHT-TCGGGEEEEECCGGGCCCSCTTCCCCEEEEC
T ss_pred ccccCCccEEEEECCHHHHHHHHHHHHHc-CCCCceEEEECChhhCccccccCCCCEEEeC
Confidence 2368999999999999999999999 998 999999999954433 2 79999998
No 277
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=97.90 E-value=1.6e-05 Score=71.53 Aligned_cols=96 Identities=9% Similarity=-0.047 Sum_probs=67.2
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCCCCccEEEE
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGELKGVDFLVV 119 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L~~fDfVFI 119 (223)
.+..+|||||||+|. .+..++.+. ++.+++-+|. |+.++.|+++ -.|+++.||..+-++ +. |+|++
T Consensus 200 ~~~~~vlDvG~G~G~--~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~------~~v~~~~~D~~~~~p--~~-D~v~~ 265 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGA--TVAAIAAHY--PTIKGVNFDL-PHVISEAPQF------PGVTHVGGDMFKEVP--SG-DTILM 265 (364)
T ss_dssp TTCSEEEEETCTTSH--HHHHHHHHC--TTCEEEEEEC-HHHHTTCCCC------TTEEEEECCTTTCCC--CC-SEEEE
T ss_pred cCCCEEEEeCCCCCH--HHHHHHHHC--CCCeEEEecC-HHHHHhhhhc------CCeEEEeCCcCCCCC--CC-CEEEe
Confidence 357899999999998 677777543 4678999999 8776665531 128999999987444 24 99998
Q ss_pred eCCC-----cccHHHHHHh-ccCCCceEE-EEeCCCC
Q 027409 120 DCTS-----KDFARVLRFA-RFSNKGAVL-AFKNAFQ 149 (223)
Q Consensus 120 Da~K-----~~Y~~~f~~~-~~l~~GgvI-V~DNvl~ 149 (223)
-.-- ++...++..+ +.++|||.+ |.|.++.
T Consensus 266 ~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~ 302 (364)
T 3p9c_A 266 KWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILP 302 (364)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred hHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 6543 3345667655 567888855 5555554
No 278
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=97.84 E-value=1.3e-06 Score=74.18 Aligned_cols=88 Identities=11% Similarity=-0.042 Sum_probs=62.7
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecc
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQ 103 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~Gd 103 (223)
.+++...+.+...+......+|||||||+|. .++.++.. +++++.||+|+++++.|+++++ . ...++++.||
T Consensus 12 l~~~~~~~~i~~~~~~~~~~~VLDiG~G~G~--~~~~l~~~----~~~v~~id~~~~~~~~a~~~~~-~-~~~v~~~~~D 83 (245)
T 1yub_A 12 LTSEKVLNQIIKQLNLKETDTVYEIGTGKGH--LTTKLAKI----SKQVTSIELDSHLFNLSSEKLK-L-NTRVTLIHQD 83 (245)
T ss_dssp CCCTTTHHHHHHHCCCCSSEEEEECSCCCSS--CSHHHHHH----SSEEEESSSSCSSSSSSSCTTT-T-CSEEEECCSC
T ss_pred CCCHHHHHHHHHhcCCCCCCEEEEEeCCCCH--HHHHHHHh----CCeEEEEECCHHHHHHHHHHhc-c-CCceEEEECC
Confidence 4455555555444555566799999999998 77777653 3799999999999999998876 2 2239999999
Q ss_pred hHHHhcCC-CCccEEEEe
Q 027409 104 AEEVMGEL-KGVDFLVVD 120 (223)
Q Consensus 104 A~evL~~L-~~fDfVFID 120 (223)
+.+.-... ++| .|+.+
T Consensus 84 ~~~~~~~~~~~f-~vv~n 100 (245)
T 1yub_A 84 ILQFQFPNKQRY-KIVGN 100 (245)
T ss_dssp CTTTTCCCSSEE-EEEEE
T ss_pred hhhcCcccCCCc-EEEEe
Confidence 98752111 357 55554
No 279
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.65 E-value=8.2e-05 Score=72.74 Aligned_cols=100 Identities=15% Similarity=0.162 Sum_probs=70.1
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCC--CcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCC-CCcc
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHT--CARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGEL-KGVD 115 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~--~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L-~~fD 115 (223)
+.+.||.||||.|- -+..++. |+... .-+|+.||.|| ++..|++..++- |+. |+++.||..++ ++ +++|
T Consensus 357 ~~~vVldVGaGrGp-Lv~~al~-A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N-~~~dkVtVI~gd~eev--~LPEKVD 430 (637)
T 4gqb_A 357 NVQVLMVLGAGRGP-LVNASLR-AAKQADRRIKLYAVEKNP-NAVVTLENWQFE-EWGSQVTVVSSDMREW--VAPEKAD 430 (637)
T ss_dssp CEEEEEEESCTTSH-HHHHHHH-HHHHTTCEEEEEEEESCH-HHHHHHHHHHHH-TTGGGEEEEESCTTTC--CCSSCEE
T ss_pred CCcEEEEECCCCcH-HHHHHHH-HHHhcCCCcEEEEEECCH-HHHHHHHHHHhc-cCCCeEEEEeCcceec--cCCcccC
Confidence 44679999999995 3333333 33222 23789999997 688999999988 877 99999999885 33 4899
Q ss_pred EEEEeC-----CCcccHHHHHHh-ccCCCceEEEEeC
Q 027409 116 FLVVDC-----TSKDFARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 116 fVFIDa-----~K~~Y~~~f~~~-~~l~~GgvIV~DN 146 (223)
+|.-.- .-|.-++++.+. +.|+|||+++=+.
T Consensus 431 IIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimiPs~ 467 (637)
T 4gqb_A 431 IIVSELLGSFADNELSPECLDGAQHFLKDDGVSIPGE 467 (637)
T ss_dssp EEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEESCE
T ss_pred EEEEEcCcccccccCCHHHHHHHHHhcCCCcEEcccc
Confidence 997541 122335555554 5679999987443
No 280
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.59 E-value=0.00014 Score=69.28 Aligned_cols=123 Identities=6% Similarity=-0.033 Sum_probs=82.1
Q ss_pred cHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCC----------------CcEEEEEeCCchHHHHHHHHH
Q 027409 26 ESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHT----------------CARHVCIVPDERSRLAYVKAM 89 (223)
Q Consensus 26 ~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~----------------~g~i~TIE~d~e~~~~Ar~~~ 89 (223)
++.+.++|.-++....-.+||+.+||+|. ..+.++...... ...++.+|+|+..++.|+.|+
T Consensus 154 P~~iv~~mv~~l~p~~~~~VlDPaCGSG~--fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl 231 (541)
T 2ar0_A 154 PRPLIKTIIHLLKPQPREVVQDPAAGTAG--FLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNC 231 (541)
T ss_dssp CHHHHHHHHHHHCCCTTCCEEETTCTTTH--HHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhccCCCCeEecCCcccch--HHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHH
Confidence 34466666555544444699999999995 444444332211 137999999999999999999
Q ss_pred HhhcCce------EEEEecchHHHhc-CCCCccEEEEeCC-----------------CcccHHHHHH-hccCCCceE---
Q 027409 90 YDVVGWV------SEVIVRQAEEVMG-ELKGVDFLVVDCT-----------------SKDFARVLRF-ARFSNKGAV--- 141 (223)
Q Consensus 90 ~~a~G~~------I~li~GdA~evL~-~L~~fDfVFIDa~-----------------K~~Y~~~f~~-~~~l~~Ggv--- 141 (223)
.-. |+. ++++.||++..-. ....||+|+.+-- ...+..+++. ++.|++||.
T Consensus 232 ~l~-gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~ 310 (541)
T 2ar0_A 232 LLH-DIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAV 310 (541)
T ss_dssp HTT-TCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEE
T ss_pred HHh-CCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEE
Confidence 877 765 6899999987532 3458999998731 1112356664 466777763
Q ss_pred EEEeCCCCCC
Q 027409 142 LAFKNAFQRS 151 (223)
Q Consensus 142 IV~DNvl~~g 151 (223)
|+.+.+|+++
T Consensus 311 V~p~~~L~~~ 320 (541)
T 2ar0_A 311 VVPDNVLFEG 320 (541)
T ss_dssp EEEHHHHHCC
T ss_pred EecCcceecC
Confidence 4455567655
No 281
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.57 E-value=0.00019 Score=69.13 Aligned_cols=105 Identities=12% Similarity=0.081 Sum_probs=69.6
Q ss_pred CeEEEEccCcchHHHHHHHHHhc----CC--CC--cEEEEEeC---CchHHHHHHH-----------HHHhh----cC--
Q 027409 43 KLIVEAWTHGGPITTSIGLAIAA----RH--TC--ARHVCIVP---DERSRLAYVK-----------AMYDV----VG-- 94 (223)
Q Consensus 43 k~ILEIGT~~Gys~Stl~la~A~----~~--~~--g~i~TIE~---d~e~~~~Ar~-----------~~~~a----~G-- 94 (223)
=+|||+|-|+||...+.|.+... .+ +. =+++++|. +++.+..|-. ..+.. -|
T Consensus 68 ~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 147 (676)
T 3ps9_A 68 FVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCH 147 (676)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEEE
T ss_pred eEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCce
Confidence 48999999999976665554211 11 12 35899999 5554443332 22111 01
Q ss_pred --------ceEEEEecchHHHhcCC-----CCccEEEEeCC-----Cccc-HHHHHHh-ccCCCceEEEEeCC
Q 027409 95 --------WVSEVIVRQAEEVMGEL-----KGVDFLVVDCT-----SKDF-ARVLRFA-RFSNKGAVLAFKNA 147 (223)
Q Consensus 95 --------~~I~li~GdA~evL~~L-----~~fDfVFIDa~-----K~~Y-~~~f~~~-~~l~~GgvIV~DNv 147 (223)
+.+++..|||.+.|+++ ..||.+|+|+- .+.+ .++|..+ +.+++||.+..-..
T Consensus 148 ~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~~ 220 (676)
T 3ps9_A 148 RLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTS 220 (676)
T ss_dssp EEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEESCC
T ss_pred EEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEeccC
Confidence 23789999999999987 36999999983 3444 5666654 56699999987764
No 282
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.54 E-value=0.00021 Score=65.16 Aligned_cols=88 Identities=10% Similarity=-0.019 Sum_probs=65.5
Q ss_pred HHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-------EEEEec
Q 027409 30 AELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-------SEVIVR 102 (223)
Q Consensus 30 g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-------I~li~G 102 (223)
..+-..++....-.+||++-+|-|= =|+.||. ...+|.|+++|+++.++...++|+++. |.. |++...
T Consensus 137 S~l~~~~L~~~pg~~VLD~CAaPGG--KT~~la~--~~~~~~l~A~D~~~~R~~~l~~~l~r~-~~~~~~~~~~v~v~~~ 211 (359)
T 4fzv_A 137 SLLPVLALGLQPGDIVLDLCAAPGG--KTLALLQ--TGCCRNLAANDLSPSRIARLQKILHSY-VPEEIRDGNQVRVTSW 211 (359)
T ss_dssp GHHHHHHHCCCTTEEEEESSCTTCH--HHHHHHH--TTCEEEEEEECSCHHHHHHHHHHHHHH-SCTTTTTSSSEEEECC
T ss_pred HHHHHHHhCCCCCCEEEEecCCccH--HHHHHHH--hcCCCcEEEEcCCHHHHHHHHHHHHHh-hhhhhccCCceEEEeC
Confidence 3333333333344589999777773 6667764 334689999999999999999999998 752 899999
Q ss_pred chHHHhcCC-CCccEEEEeCC
Q 027409 103 QAEEVMGEL-KGVDFLVVDCT 122 (223)
Q Consensus 103 dA~evL~~L-~~fDfVFIDa~ 122 (223)
||...-+.. +.||-|++||-
T Consensus 212 D~~~~~~~~~~~fD~VLlDaP 232 (359)
T 4fzv_A 212 DGRKWGELEGDTYDRVLVDVP 232 (359)
T ss_dssp CGGGHHHHSTTCEEEEEEECC
T ss_pred chhhcchhccccCCEEEECCc
Confidence 998754433 47999999975
No 283
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.44 E-value=0.0001 Score=65.56 Aligned_cols=117 Identities=9% Similarity=-0.007 Sum_probs=81.0
Q ss_pred CcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecch
Q 027409 25 KESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQA 104 (223)
Q Consensus 25 i~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA 104 (223)
..+....+++++-. .++..+|++=.|+| +++..+.+.+.+++-+|.+++..+.-++|++.. -+++++.+|+
T Consensus 76 ~p~~l~~yf~~l~~-~n~~~~LDlfaGSG------aLgiEaLS~~d~~vfvE~~~~a~~~L~~Nl~~~--~~~~V~~~D~ 146 (283)
T 2oo3_A 76 LPSLFLEYISVIKQ-INLNSTLSYYPGSP------YFAINQLRSQDRLYLCELHPTEYNFLLKLPHFN--KKVYVNHTDG 146 (283)
T ss_dssp SCGGGHHHHHHHHH-HSSSSSCCEEECHH------HHHHHHSCTTSEEEEECCSHHHHHHHTTSCCTT--SCEEEECSCH
T ss_pred CcHHHHHHHHHHHH-hcCCCceeEeCCcH------HHHHHHcCCCCeEEEEeCCHHHHHHHHHHhCcC--CcEEEEeCcH
Confidence 34445678887777 46777877744433 233333344579999999999999999999763 2389999999
Q ss_pred HHHhcCC----CCccEEEEeC--C-CcccHHHHHHhc---cCCCceEEE-EeCCCCC
Q 027409 105 EEVMGEL----KGVDFLVVDC--T-SKDFARVLRFAR---FSNKGAVLA-FKNAFQR 150 (223)
Q Consensus 105 ~evL~~L----~~fDfVFIDa--~-K~~Y~~~f~~~~---~l~~GgvIV-~DNvl~~ 150 (223)
.+.|..+ .+||+||||- . |..|.+.++.+. .+.++|+++ =--++.+
T Consensus 147 ~~~L~~l~~~~~~fdLVfiDPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~~~ 203 (283)
T 2oo3_A 147 VSKLNALLPPPEKRGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVNK 203 (283)
T ss_dssp HHHHHHHCSCTTSCEEEEECCCCCSTTHHHHHHHHHHHHHHHCTTSEEEEEEEESSH
T ss_pred HHHHHHhcCCCCCccEEEECCCCCCCcHHHHHHHHHHHhCccCCCeEEEEEEeccch
Confidence 9988754 2699999997 3 578888888662 345555554 4444433
No 284
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.36 E-value=0.00025 Score=70.27 Aligned_cols=101 Identities=11% Similarity=0.056 Sum_probs=67.9
Q ss_pred CCeEEEEccCcchHHHHHHHHHhcCC-----------CCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHH-
Q 027409 42 AKLIVEAWTHGGPITTSIGLAIAARH-----------TCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEV- 107 (223)
Q Consensus 42 ak~ILEIGT~~Gys~Stl~la~A~~~-----------~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~ev- 107 (223)
.+.||+||||+|. -|..++. |+.. ...+|+.||.|+......+...+ - |+. |+++.||..++
T Consensus 410 ~~VVldVGaGtGp-Ls~~al~-A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-N-g~~d~VtVI~gd~eev~ 485 (745)
T 3ua3_A 410 TVVIYLLGGGRGP-IGTKILK-SEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-R-TWKRRVTIIESDMRSLP 485 (745)
T ss_dssp EEEEEEESCTTCH-HHHHHHH-HHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-H-TTTTCSEEEESCGGGHH
T ss_pred CcEEEEECCCCCH-HHHHHHH-HHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-c-CCCCeEEEEeCchhhcc
Confidence 5689999999996 3322222 2211 23599999999865544444433 4 555 99999999986
Q ss_pred hc----CCCCccEEEEeC-----CCcccHHHHHHh-ccCCCceEEEEeC
Q 027409 108 MG----ELKGVDFLVVDC-----TSKDFARVLRFA-RFSNKGAVLAFKN 146 (223)
Q Consensus 108 L~----~L~~fDfVFIDa-----~K~~Y~~~f~~~-~~l~~GgvIV~DN 146 (223)
++ ..++.|+|.--- +-+.++++++.+ +.|+|||+++=+.
T Consensus 486 lp~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~iP~~ 534 (745)
T 3ua3_A 486 GIAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISIPQK 534 (745)
T ss_dssp HHHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEESCE
T ss_pred cccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEECCc
Confidence 42 125799997542 345667888866 5679999987443
No 285
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.36 E-value=0.0016 Score=62.26 Aligned_cols=94 Identities=11% Similarity=-0.059 Sum_probs=71.1
Q ss_pred CCcHHHHHHHHHHHHh----cCCCeEEEEccCcchHHHHHHHHHhcC-CCCcEEEEEeCCchHHHHHHHHHHhhcCc--e
Q 027409 24 IKESGVAELLSAMAAG----WNAKLIVEAWTHGGPITTSIGLAIAAR-HTCARHVCIVPDERSRLAYVKAMYDVVGW--V 96 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~----~~ak~ILEIGT~~Gys~Stl~la~A~~-~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~--~ 96 (223)
--++++.++|.-++.. ....+|++.+||+|- ..+.++.... .....++.+|+|+..+..|+.|+.-. |+ .
T Consensus 200 yTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~--fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~-gi~~~ 276 (542)
T 3lkd_A 200 YTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGS--LLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILH-GVPIE 276 (542)
T ss_dssp CCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTST--TGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHT-TCCGG
T ss_pred cccHHHHHHHHHHHhcccCCCCCCEEeecccchhH--HHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHc-CCCcC
Confidence 3466688888888873 355699999999995 4444443332 23568999999999999999999888 88 4
Q ss_pred -EEEEecchHHHh-cC--CCCccEEEEe
Q 027409 97 -SEVIVRQAEEVM-GE--LKGVDFLVVD 120 (223)
Q Consensus 97 -I~li~GdA~evL-~~--L~~fDfVFID 120 (223)
++++.||+++.- +. ...||+|+-.
T Consensus 277 ~~~I~~gDtL~~d~p~~~~~~fD~IvaN 304 (542)
T 3lkd_A 277 NQFLHNADTLDEDWPTQEPTNFDGVLMN 304 (542)
T ss_dssp GEEEEESCTTTSCSCCSSCCCBSEEEEC
T ss_pred ccceEecceecccccccccccccEEEec
Confidence 899999998751 22 2479999954
No 286
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=97.31 E-value=0.00011 Score=58.21 Aligned_cols=83 Identities=12% Similarity=0.149 Sum_probs=60.1
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhc---CCCCccEE
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMG---ELKGVDFL 117 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~---~L~~fDfV 117 (223)
.-.+||+|||+. +++|.++++++.|++.+... ++++.+|+.+.-. .-+.||+|
T Consensus 12 ~g~~vL~~~~g~--------------------v~vD~s~~ml~~a~~~~~~~----~~~~~~d~~~~~~~~~~~~~fD~V 67 (176)
T 2ld4_A 12 AGQFVAVVWDKS--------------------SPVEALKGLVDKLQALTGNE----GRVSVENIKQLLQSAHKESSFDII 67 (176)
T ss_dssp TTSEEEEEECTT--------------------SCHHHHHHHHHHHHHHTTTT----SEEEEEEGGGGGGGCCCSSCEEEE
T ss_pred CCCEEEEecCCc--------------------eeeeCCHHHHHHHHHhcccC----cEEEEechhcCccccCCCCCEeEE
Confidence 447899998862 23899999999999876443 7999999987533 22479999
Q ss_pred EEeCCC----cccHHHHHHh-ccCCCceEEEEeCC
Q 027409 118 VVDCTS----KDFARVLRFA-RFSNKGAVLAFKNA 147 (223)
Q Consensus 118 FIDa~K----~~Y~~~f~~~-~~l~~GgvIV~DNv 147 (223)
+.-..- .+...+|..+ +.|+|||.+++.+-
T Consensus 68 ~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 102 (176)
T 2ld4_A 68 LSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEP 102 (176)
T ss_dssp EECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EECChhhhcccCHHHHHHHHHHHCCCCEEEEEEcc
Confidence 973221 3457778655 67899999998553
No 287
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.09 E-value=0.00091 Score=59.51 Aligned_cols=78 Identities=15% Similarity=0.097 Sum_probs=61.7
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHH---hcCC--CCc
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEV---MGEL--KGV 114 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~ev---L~~L--~~f 114 (223)
.....+|+.+||.|- -|..++.. +|+|+.+|.||+.++.|++ ++. -.++++.++..++ |.++ +++
T Consensus 21 ~~gg~~VD~T~G~GG--HS~~il~~----~g~VigiD~Dp~Ai~~A~~-L~~---~rv~lv~~~f~~l~~~L~~~g~~~v 90 (285)
T 1wg8_A 21 RPGGVYVDATLGGAG--HARGILER----GGRVIGLDQDPEAVARAKG-LHL---PGLTVVQGNFRHLKRHLAALGVERV 90 (285)
T ss_dssp CTTCEEEETTCTTSH--HHHHHHHT----TCEEEEEESCHHHHHHHHH-TCC---TTEEEEESCGGGHHHHHHHTTCSCE
T ss_pred CCCCEEEEeCCCCcH--HHHHHHHC----CCEEEEEeCCHHHHHHHHh-hcc---CCEEEEECCcchHHHHHHHcCCCCc
Confidence 445789999999985 66677653 7899999999999999999 644 1389999999775 6554 479
Q ss_pred cEEEEeCCCcccH
Q 027409 115 DFLVVDCTSKDFA 127 (223)
Q Consensus 115 DfVFIDa~K~~Y~ 127 (223)
|.|+.|-.-+.+.
T Consensus 91 DgIL~DLGvSS~Q 103 (285)
T 1wg8_A 91 DGILADLGVSSFH 103 (285)
T ss_dssp EEEEEECSCCHHH
T ss_pred CEEEeCCcccccc
Confidence 9999997655554
No 288
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=96.77 E-value=0.0024 Score=51.99 Aligned_cols=82 Identities=11% Similarity=0.004 Sum_probs=57.8
Q ss_pred HHHhcC-CCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC-CC
Q 027409 36 MAAGWN-AKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL-KG 113 (223)
Q Consensus 36 L~~~~~-ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L-~~ 113 (223)
+.+-.+ +.+|||||||.|+ .-+.+||. ..+-.|+.+|++|...+ ++.+|..+-..++ ++
T Consensus 29 I~~~~~~~~rVlEVG~G~g~-~vA~~La~---~~g~~V~atDInp~Av~---------------~v~dDiF~P~~~~Y~~ 89 (153)
T 2k4m_A 29 IIRCSGPGTRVVEVGAGRFL-YVSDYIRK---HSKVDLVLTDIKPSHGG---------------IVRDDITSPRMEIYRG 89 (153)
T ss_dssp HHHHSCSSSEEEEETCTTCC-HHHHHHHH---HSCCEEEEECSSCSSTT---------------EECCCSSSCCHHHHTT
T ss_pred HHhcCCCCCcEEEEccCCCh-HHHHHHHH---hCCCeEEEEECCccccc---------------eEEccCCCCcccccCC
Confidence 344444 5699999999994 14556653 13567999999998544 5667776622222 58
Q ss_pred ccEE-EEeCCCcccHHHHHHhccC
Q 027409 114 VDFL-VVDCTSKDFARVLRFARFS 136 (223)
Q Consensus 114 fDfV-FIDa~K~~Y~~~f~~~~~l 136 (223)
||+| -|-.-.+..+..+++.+..
T Consensus 90 ~DLIYsirPP~El~~~i~~lA~~v 113 (153)
T 2k4m_A 90 AALIYSIRPPAEIHSSLMRVADAV 113 (153)
T ss_dssp EEEEEEESCCTTTHHHHHHHHHHH
T ss_pred cCEEEEcCCCHHHHHHHHHHHHHc
Confidence 9999 8888888888888877554
No 289
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=96.71 E-value=0.0058 Score=61.54 Aligned_cols=95 Identities=6% Similarity=-0.034 Sum_probs=63.9
Q ss_pred CCcHHHHHHHHHHHHhc------CCCeEEEEccCcchHHHHHHHHHhcC-CCCcEEEEEeCCchHHHHH--HHHHHhh--
Q 027409 24 IKESGVAELLSAMAAGW------NAKLIVEAWTHGGPITTSIGLAIAAR-HTCARHVCIVPDERSRLAY--VKAMYDV-- 92 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~------~ak~ILEIGT~~Gys~Stl~la~A~~-~~~g~i~TIE~d~e~~~~A--r~~~~~a-- 92 (223)
-.++++++++..++... ...+|||.|||+|- ..++++.... ....+++.+|+|+..++.| +.|+...
T Consensus 298 YTP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~--FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~L 375 (878)
T 3s1s_A 298 PTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGN--LLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQL 375 (878)
T ss_dssp SCCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSH--HHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTT
T ss_pred cCCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccH--HHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhh
Confidence 45677888888884321 35699999999996 4545554332 1236799999999999999 7776542
Q ss_pred -cCce-EEEEecchHHHhc-CCCCccEEEEe
Q 027409 93 -VGWV-SEVIVRQAEEVMG-ELKGVDFLVVD 120 (223)
Q Consensus 93 -~G~~-I~li~GdA~evL~-~L~~fDfVFID 120 (223)
.|.. +.+..+|.++.-. ....||+|+-+
T Consensus 376 lhGi~~~~I~~dD~L~~~~~~~~kFDVVIgN 406 (878)
T 3s1s_A 376 VSSNNAPTITGEDVCSLNPEDFANVSVVVMN 406 (878)
T ss_dssp CBTTBCCEEECCCGGGCCGGGGTTEEEEEEC
T ss_pred hcCCCcceEEecchhcccccccCCCCEEEEC
Confidence 1444 4667677665211 22579999875
No 290
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.62 E-value=0.0053 Score=55.86 Aligned_cols=77 Identities=5% Similarity=-0.116 Sum_probs=55.2
Q ss_pred CCcHHHHHHHHHHHHhcC------CCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceE
Q 027409 24 IKESGVAELLSAMAAGWN------AKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVS 97 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~------ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I 97 (223)
++++.+.+=+--.+...+ -..|||||.|.|. .|-.|+.... ..+|+.||+|+.....-++.+ .. + .+
T Consensus 35 L~d~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~--LT~~Ll~~~~--~~~vvavE~D~~l~~~L~~~~-~~-~-~l 107 (353)
T 1i4w_A 35 LWNPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGI--QSAIFYNKYC--PRQYSLLEKRSSLYKFLNAKF-EG-S-PL 107 (353)
T ss_dssp BCCHHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCH--HHHHHHHHHC--CSEEEEECCCHHHHHHHHHHT-TT-S-SC
T ss_pred cCCHHHHHHHHHhccCCcccCcCCCCEEEEECCCCCH--HHHHHHhhCC--CCEEEEEecCHHHHHHHHHhc-cC-C-CE
Confidence 677776655555554432 3679999999997 7777775322 358999999999887776665 22 2 38
Q ss_pred EEEecchHHH
Q 027409 98 EVIVRQAEEV 107 (223)
Q Consensus 98 ~li~GdA~ev 107 (223)
+++.|||+++
T Consensus 108 ~ii~~D~l~~ 117 (353)
T 1i4w_A 108 QILKRDPYDW 117 (353)
T ss_dssp EEECSCTTCH
T ss_pred EEEECCccch
Confidence 9999999754
No 291
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=96.61 E-value=0.0017 Score=62.08 Aligned_cols=93 Identities=8% Similarity=-0.071 Sum_probs=65.1
Q ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCC-------------CCcEEEEEeCCchHHHHHHHHHH
Q 027409 24 IKESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARH-------------TCARHVCIVPDERSRLAYVKAMY 90 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~-------------~~g~i~TIE~d~e~~~~Ar~~~~ 90 (223)
--++++.++|.-++... +.+||+.+||+|- ..+..+..... ....++.+|+|+..+..|+.|+.
T Consensus 228 yTP~~Vv~lmv~ll~p~-~~~VlDPaCGSG~--fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~ 304 (544)
T 3khk_A 228 YTPKSIVTLIVEMLEPY-KGRVYDPAMGSGG--FFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMV 304 (544)
T ss_dssp CCCHHHHHHHHHHHCCC-SEEEEESSCTTCH--HHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHH
T ss_pred eCCHHHHHHHHHHHhcC-CCeEeCcccCcCc--HHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHH
Confidence 34566777777776543 3489999999994 33332211110 03579999999999999999999
Q ss_pred hhcCce--EEEEecchHHHhcCC-CCccEEEEe
Q 027409 91 DVVGWV--SEVIVRQAEEVMGEL-KGVDFLVVD 120 (223)
Q Consensus 91 ~a~G~~--I~li~GdA~evL~~L-~~fDfVFID 120 (223)
-. |+. |.++.||++..-... ..||+|+..
T Consensus 305 l~-gi~~~i~i~~gDtL~~~~~~~~~fD~Iv~N 336 (544)
T 3khk_A 305 IR-GIDFNFGKKNADSFLDDQHPDLRADFVMTN 336 (544)
T ss_dssp HT-TCCCBCCSSSCCTTTSCSCTTCCEEEEEEC
T ss_pred Hh-CCCcccceeccchhcCcccccccccEEEEC
Confidence 88 887 555999988642221 479999975
No 292
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.09 E-value=0.019 Score=49.92 Aligned_cols=47 Identities=13% Similarity=0.099 Sum_probs=37.5
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhh
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDV 92 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a 92 (223)
..-..||+.+||+|. .+++.+ ..+.+++.||+++++++.|+++++++
T Consensus 234 ~~~~~vlD~f~GsGt--~~~~a~----~~g~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 234 FVGDVVLDPFAGTGT--TLIAAA----RWGRRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp CTTCEEEETTCTTTH--HHHHHH----HTTCEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCH--HHHHHH----HcCCeEEEEeCCHHHHHHHHHHHHHh
Confidence 345689999999985 443432 13568999999999999999999987
No 293
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=95.84 E-value=0.014 Score=53.51 Aligned_cols=52 Identities=15% Similarity=0.098 Sum_probs=42.7
Q ss_pred HhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHh
Q 027409 38 AGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYD 91 (223)
Q Consensus 38 ~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~ 91 (223)
...+...+++||+.+|+ ++++++....++.++|+++|++|+.++..++|++.
T Consensus 223 ~l~~~~~viDvGAn~G~--~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 223 RFSDSEKMVDCGASIGE--SLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CCCSSCEEEEETCTTSH--HHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred ccCCCCEEEECCCCcCH--HHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 34577899999999998 77777633334448999999999999999999987
No 294
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.53 E-value=0.016 Score=46.45 Aligned_cols=93 Identities=13% Similarity=0.119 Sum_probs=57.0
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcC-C--CCc
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGE-L--KGV 114 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~-L--~~f 114 (223)
..-++||.+|.+.|.+..++.++.+ .+.+|+.+++++++.+.+++ . |.. ++....+..+.+.+ . ..+
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~---~G~~V~~~~~~~~~~~~~~~----~-g~~~~~d~~~~~~~~~~~~~~~~~~~ 108 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKM---IGARIYTTAGSDAKREMLSR----L-GVEYVGDSRSVDFADEILELTDGYGV 108 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHH---HTCEEEEEESSHHHHHHHHT----T-CCSEEEETTCSTHHHHHHHHTTTCCE
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHH---cCCEEEEEeCCHHHHHHHHH----c-CCCEEeeCCcHHHHHHHHHHhCCCCC
Confidence 3457899999665643344444432 36799999999887766543 4 654 33333444444433 2 269
Q ss_pred cEEEEeCCCcccHHHHH-HhccCCCceEEEE
Q 027409 115 DFLVVDCTSKDFARVLR-FARFSNKGAVLAF 144 (223)
Q Consensus 115 DfVFIDa~K~~Y~~~f~-~~~~l~~GgvIV~ 144 (223)
|.|| |+.- ...++ .++.+++||.+|.
T Consensus 109 D~vi-~~~g---~~~~~~~~~~l~~~G~~v~ 135 (198)
T 1pqw_A 109 DVVL-NSLA---GEAIQRGVQILAPGGRFIE 135 (198)
T ss_dssp EEEE-ECCC---THHHHHHHHTEEEEEEEEE
T ss_pred eEEE-ECCc---hHHHHHHHHHhccCCEEEE
Confidence 9988 4442 24555 4466788998875
No 295
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=95.14 E-value=0.059 Score=47.99 Aligned_cols=101 Identities=16% Similarity=0.159 Sum_probs=66.9
Q ss_pred HHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCc-EEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcC---
Q 027409 37 AAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCA-RHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGE--- 110 (223)
Q Consensus 37 ~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g-~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~--- 110 (223)
++...-++||=+|+| |.+..++.+|.+. +. +|+.++.++++.+.|++ . |.. +.....|..+.+.+
T Consensus 178 ~~~~~g~~VlV~GaG-~vG~~aiqlak~~---Ga~~Vi~~~~~~~~~~~a~~----l-Ga~~vi~~~~~~~~~~i~~~~~ 248 (370)
T 4ej6_A 178 SGIKAGSTVAILGGG-VIGLLTVQLARLA---GATTVILSTRQATKRRLAEE----V-GATATVDPSAGDVVEAIAGPVG 248 (370)
T ss_dssp HTCCTTCEEEEECCS-HHHHHHHHHHHHT---TCSEEEEECSCHHHHHHHHH----H-TCSEEECTTSSCHHHHHHSTTS
T ss_pred cCCCCCCEEEEECCC-HHHHHHHHHHHHc---CCCEEEEECCCHHHHHHHHH----c-CCCEEECCCCcCHHHHHHhhhh
Confidence 344456789999974 6655666776643 55 89999999998887765 4 655 44445666676665
Q ss_pred C--CCccEEEEeCCCcccHHHHH-HhccCCCceEEEEeCCCC
Q 027409 111 L--KGVDFLVVDCTSKDFARVLR-FARFSNKGAVLAFKNAFQ 149 (223)
Q Consensus 111 L--~~fDfVFIDa~K~~Y~~~f~-~~~~l~~GgvIV~DNvl~ 149 (223)
+ +.+|+|| |+.- ....++ .+..+++||.+|.=....
T Consensus 249 ~~~gg~Dvvi-d~~G--~~~~~~~~~~~l~~~G~vv~~G~~~ 287 (370)
T 4ej6_A 249 LVPGGVDVVI-ECAG--VAETVKQSTRLAKAGGTVVILGVLP 287 (370)
T ss_dssp SSTTCEEEEE-ECSC--CHHHHHHHHHHEEEEEEEEECSCCC
T ss_pred ccCCCCCEEE-ECCC--CHHHHHHHHHHhccCCEEEEEeccC
Confidence 4 3799886 5542 234454 446678889888754443
No 296
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=94.85 E-value=0.14 Score=45.41 Aligned_cols=94 Identities=18% Similarity=0.075 Sum_probs=59.1
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCCCCccEEE
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGELKGVDFLV 118 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L~~fDfVF 118 (223)
.-++||=+|.+.|.+..++.+|.+. +.+|+.++ ++++.+.++ +. |.. +.....+..+.+.+...+|+||
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~~---Ga~Vi~~~-~~~~~~~~~----~l-Ga~~v~~~~~~~~~~~~~~~~g~D~vi 253 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKAW---DAHVTAVC-SQDASELVR----KL-GADDVIDYKSGSVEEQLKSLKPFDFIL 253 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEE-CGGGHHHHH----HT-TCSEEEETTSSCHHHHHHTSCCBSEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhC---CCEEEEEe-ChHHHHHHH----Hc-CCCEEEECCchHHHHHHhhcCCCCEEE
Confidence 3468999996556654666666542 57888888 567665553 45 655 3333345555555556799875
Q ss_pred EeCCCcccHHHHHHhccCCCceEEEE
Q 027409 119 VDCTSKDFARVLRFARFSNKGAVLAF 144 (223)
Q Consensus 119 IDa~K~~Y~~~f~~~~~l~~GgvIV~ 144 (223)
|+.-..+..+-..+..+++||.+|.
T Consensus 254 -d~~g~~~~~~~~~~~~l~~~G~iv~ 278 (375)
T 2vn8_A 254 -DNVGGSTETWAPDFLKKWSGATYVT 278 (375)
T ss_dssp -ESSCTTHHHHGGGGBCSSSCCEEEE
T ss_pred -ECCCChhhhhHHHHHhhcCCcEEEE
Confidence 6654443322235577788998875
No 297
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=94.69 E-value=0.064 Score=46.81 Aligned_cols=96 Identities=13% Similarity=0.086 Sum_probs=62.6
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCC-CCccE
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGEL-KGVDF 116 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L-~~fDf 116 (223)
..-++||-+|++ |.+..++.+|++. +.+|+.++.++++.+.+++ . |.. +.....|..+.+.+. +.+|.
T Consensus 165 ~~g~~VlV~GaG-~vG~~a~qla~~~---Ga~Vi~~~~~~~~~~~~~~----l-Ga~~~i~~~~~~~~~~~~~~~g~~d~ 235 (340)
T 3s2e_A 165 RPGQWVVISGIG-GLGHVAVQYARAM---GLRVAAVDIDDAKLNLARR----L-GAEVAVNARDTDPAAWLQKEIGGAHG 235 (340)
T ss_dssp CTTSEEEEECCS-TTHHHHHHHHHHT---TCEEEEEESCHHHHHHHHH----T-TCSEEEETTTSCHHHHHHHHHSSEEE
T ss_pred CCCCEEEEECCC-HHHHHHHHHHHHC---CCeEEEEeCCHHHHHHHHH----c-CCCEEEeCCCcCHHHHHHHhCCCCCE
Confidence 345789999974 5544676777643 6799999999998887754 4 655 433344555544432 47999
Q ss_pred EEEeCCCcccHHHHH-HhccCCCceEEEEeCC
Q 027409 117 LVVDCTSKDFARVLR-FARFSNKGAVLAFKNA 147 (223)
Q Consensus 117 VFIDa~K~~Y~~~f~-~~~~l~~GgvIV~DNv 147 (223)
||..+.. ...++ .+..+++||.++.=-.
T Consensus 236 vid~~g~---~~~~~~~~~~l~~~G~iv~~G~ 264 (340)
T 3s2e_A 236 VLVTAVS---PKAFSQAIGMVRRGGTIALNGL 264 (340)
T ss_dssp EEESSCC---HHHHHHHHHHEEEEEEEEECSC
T ss_pred EEEeCCC---HHHHHHHHHHhccCCEEEEeCC
Confidence 9766542 34454 4456688888876443
No 298
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=94.67 E-value=0.029 Score=49.12 Aligned_cols=97 Identities=10% Similarity=0.008 Sum_probs=63.2
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCC---CCc
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGEL---KGV 114 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L---~~f 114 (223)
..-++||-+|++.|.+..++.+|.+. +++|+.++.++++.+.+++ . |.. +.....+..+.+.++ ..+
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~---Ga~Vi~~~~~~~~~~~~~~----l-ga~~~~~~~~~~~~~~~~~~~~~~g~ 214 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQIL---NFRLIAVTRNNKHTEELLR----L-GAAYVIDTSTAPLYETVMELTNGIGA 214 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHH---TCEEEEEESSSTTHHHHHH----H-TCSEEEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHc---CCEEEEEeCCHHHHHHHHh----C-CCcEEEeCCcccHHHHHHHHhCCCCC
Confidence 34579999998866544666666543 6799999999999888876 3 544 333334555545443 269
Q ss_pred cEEEEeCCCcccHHHHHHhccCCCceEEEEeCC
Q 027409 115 DFLVVDCTSKDFARVLRFARFSNKGAVLAFKNA 147 (223)
Q Consensus 115 DfVFIDa~K~~Y~~~f~~~~~l~~GgvIV~DNv 147 (223)
|+|| |+.-.. ...+.+..+++||.+|.=-.
T Consensus 215 Dvvi-d~~g~~--~~~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 215 DAAI-DSIGGP--DGNELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp EEEE-ESSCHH--HHHHHHHTEEEEEEEEECCC
T ss_pred cEEE-ECCCCh--hHHHHHHHhcCCCEEEEEee
Confidence 9876 554332 23445566788998887544
No 299
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=94.65 E-value=0.047 Score=49.01 Aligned_cols=95 Identities=14% Similarity=0.058 Sum_probs=60.3
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCc-EEEEEeCCchHHHHHHHHHHhhcCce-EEEEecch-HHHhcCC--C-C
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCA-RHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVRQA-EEVMGEL--K-G 113 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g-~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~GdA-~evL~~L--~-~ 113 (223)
..-++||-+|+ .|.+..++.+|++. +. +|+.++.++++.+.|+ +. |.. |.....|. .+.+.++ + .
T Consensus 184 ~~g~~VlV~Ga-G~vG~~aiqlak~~---Ga~~Vi~~~~~~~~~~~a~----~l-Ga~~i~~~~~~~~~~~~~~~~~g~g 254 (398)
T 2dph_A 184 KPGSHVYIAGA-GPVGRCAAAGARLL---GAACVIVGDQNPERLKLLS----DA-GFETIDLRNSAPLRDQIDQILGKPE 254 (398)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHH---TCSEEEEEESCHHHHHHHH----TT-TCEEEETTSSSCHHHHHHHHHSSSC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHc---CCCEEEEEcCCHHHHHHHH----Hc-CCcEEcCCCcchHHHHHHHHhCCCC
Confidence 34478999997 45544666777653 55 8999999999887765 34 664 33333443 4545443 2 6
Q ss_pred ccEEEEeCCCccc------------HHHHH-HhccCCCceEEEE
Q 027409 114 VDFLVVDCTSKDF------------ARVLR-FARFSNKGAVLAF 144 (223)
Q Consensus 114 fDfVFIDa~K~~Y------------~~~f~-~~~~l~~GgvIV~ 144 (223)
||+|| |+.-..+ ...++ .++.+++||.++.
T Consensus 255 ~Dvvi-d~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~ 297 (398)
T 2dph_A 255 VDCGV-DAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGI 297 (398)
T ss_dssp EEEEE-ECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEEC
T ss_pred CCEEE-ECCCCccccccccccccccHHHHHHHHHHHhcCCEEEE
Confidence 99986 6544332 23454 4566788888774
No 300
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=94.36 E-value=0.079 Score=46.60 Aligned_cols=98 Identities=9% Similarity=0.077 Sum_probs=59.4
Q ss_pred CeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEe---cchHHHhcCC-----C
Q 027409 43 KLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIV---RQAEEVMGEL-----K 112 (223)
Q Consensus 43 k~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~---GdA~evL~~L-----~ 112 (223)
++||=+|.+.|.+..++.+|++. +.+++++..+++..+..++..++. |.. +.... .|..+.+.++ .
T Consensus 169 ~~VlV~Ga~G~vG~~aiqlak~~---Ga~vi~~~~~~~~~~~~~~~~~~l-Ga~~vi~~~~~~~~~~~~~i~~~t~~~~~ 244 (364)
T 1gu7_A 169 DWFIQNGGTSAVGKYASQIGKLL---NFNSISVIRDRPNLDEVVASLKEL-GATQVITEDQNNSREFGPTIKEWIKQSGG 244 (364)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHH---TCEEEEEECCCTTHHHHHHHHHHH-TCSEEEEHHHHHCGGGHHHHHHHHHHHTC
T ss_pred cEEEECCCCcHHHHHHHHHHHHC---CCEEEEEecCccccHHHHHHHHhc-CCeEEEecCccchHHHHHHHHHHhhccCC
Confidence 78999998667655777777653 678777776665433333444566 765 32221 3334444432 2
Q ss_pred CccEEEEeCCCcccHHHHHHhccCCCceEEEEeCC
Q 027409 113 GVDFLVVDCTSKDFARVLRFARFSNKGAVLAFKNA 147 (223)
Q Consensus 113 ~fDfVFIDa~K~~Y~~~f~~~~~l~~GgvIV~DNv 147 (223)
.+|+|| |+.-.. .....+..+++||.+|.=..
T Consensus 245 g~Dvvi-d~~G~~--~~~~~~~~l~~~G~~v~~g~ 276 (364)
T 1gu7_A 245 EAKLAL-NCVGGK--SSTGIARKLNNNGLMLTYGG 276 (364)
T ss_dssp CEEEEE-ESSCHH--HHHHHHHTSCTTCEEEECCC
T ss_pred CceEEE-ECCCch--hHHHHHHHhccCCEEEEecC
Confidence 699886 665332 23456677888998876443
No 301
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=94.31 E-value=0.17 Score=43.61 Aligned_cols=91 Identities=16% Similarity=0.077 Sum_probs=59.2
Q ss_pred eEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCccEEEEeC
Q 027409 44 LIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVDFLVVDC 121 (223)
Q Consensus 44 ~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fDfVFIDa 121 (223)
+||=+|.+.|.+..++.+|++. +.+|+.++.++++.+.+++ . |.. .++.-+..+.+..+ ..+|.| +|+
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~---Ga~Vi~~~~~~~~~~~~~~----l-Ga~-~vi~~~~~~~~~~~~~~~~d~v-~d~ 218 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKL---GYQVAAVSGRESTHGYLKS----L-GAN-RILSRDEFAESRPLEKQLWAGA-IDT 218 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT---TCCEEEEESCGGGHHHHHH----H-TCS-EEEEGGGSSCCCSSCCCCEEEE-EES
T ss_pred eEEEECCCcHHHHHHHHHHHHc---CCEEEEEeCCHHHHHHHHh----c-CCC-EEEecCCHHHHHhhcCCCccEE-EEC
Confidence 5999998666655777777643 6789999999999888875 4 654 12222211124444 379976 577
Q ss_pred CCcccHHHHH-HhccCCCceEEEEeCC
Q 027409 122 TSKDFARVLR-FARFSNKGAVLAFKNA 147 (223)
Q Consensus 122 ~K~~Y~~~f~-~~~~l~~GgvIV~DNv 147 (223)
.-.. .++ .+..+++||.+|.=..
T Consensus 219 ~g~~---~~~~~~~~l~~~G~iv~~G~ 242 (324)
T 3nx4_A 219 VGDK---VLAKVLAQMNYGGCVAACGL 242 (324)
T ss_dssp SCHH---HHHHHHHTEEEEEEEEECCC
T ss_pred CCcH---HHHHHHHHHhcCCEEEEEec
Confidence 5432 555 5567788998886443
No 302
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=94.30 E-value=0.036 Score=48.77 Aligned_cols=98 Identities=12% Similarity=-0.040 Sum_probs=62.2
Q ss_pred hcCCCeEEEEccCcchHHHHHHHHHhcCCCCc-EEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCC-C--
Q 027409 39 GWNAKLIVEAWTHGGPITTSIGLAIAARHTCA-RHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGEL-K-- 112 (223)
Q Consensus 39 ~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g-~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L-~-- 112 (223)
...-.+||-+|+| |.+..++.+|++ .+. +|+.++.++++.+.|++ . |.. +.....|..+.+.++ +
T Consensus 164 ~~~g~~VlV~GaG-~vG~~a~qla~~---~Ga~~Vi~~~~~~~~~~~~~~----l-Ga~~vi~~~~~~~~~~v~~~t~g~ 234 (352)
T 3fpc_A 164 IKLGDTVCVIGIG-PVGLMSVAGANH---LGAGRIFAVGSRKHCCDIALE----Y-GATDIINYKNGDIVEQILKATDGK 234 (352)
T ss_dssp CCTTCCEEEECCS-HHHHHHHHHHHT---TTCSSEEEECCCHHHHHHHHH----H-TCCEEECGGGSCHHHHHHHHTTTC
T ss_pred CCCCCEEEEECCC-HHHHHHHHHHHH---cCCcEEEEECCCHHHHHHHHH----h-CCceEEcCCCcCHHHHHHHHcCCC
Confidence 3456789999964 554466666654 255 79999999998887765 3 554 333345556655544 2
Q ss_pred CccEEEEeCCCcccHHHHH-HhccCCCceEEEEeCCC
Q 027409 113 GVDFLVVDCTSKDFARVLR-FARFSNKGAVLAFKNAF 148 (223)
Q Consensus 113 ~fDfVFIDa~K~~Y~~~f~-~~~~l~~GgvIV~DNvl 148 (223)
.+|+|| |+.-. ...++ .++.+++||.++.=...
T Consensus 235 g~D~v~-d~~g~--~~~~~~~~~~l~~~G~~v~~G~~ 268 (352)
T 3fpc_A 235 GVDKVV-IAGGD--VHTFAQAVKMIKPGSDIGNVNYL 268 (352)
T ss_dssp CEEEEE-ECSSC--TTHHHHHHHHEEEEEEEEECCCC
T ss_pred CCCEEE-ECCCC--hHHHHHHHHHHhcCCEEEEeccc
Confidence 699987 65432 23343 44566788888765543
No 303
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=94.20 E-value=0.087 Score=45.17 Aligned_cols=90 Identities=14% Similarity=0.128 Sum_probs=57.3
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecch-HHHhcCCCCccEEEE
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQA-EEVMGELKGVDFLVV 119 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA-~evL~~L~~fDfVFI 119 (223)
.-++||-+|.+.|.+..++.+|.+ .+.+|+.++.++++.+.+++ . |.. .++.-+. .+....+..+|.||-
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~---~Ga~Vi~~~~~~~~~~~~~~----~-ga~-~~~~~~~~~~~~~~~~~~d~vid 195 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARA---MGLRVLAAASRPEKLALPLA----L-GAE-EAATYAEVPERAKAWGGLDLVLE 195 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHH---TTCEEEEEESSGGGSHHHHH----T-TCS-EEEEGGGHHHHHHHTTSEEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHh----c-CCC-EEEECCcchhHHHHhcCceEEEE
Confidence 457899999866654466666654 26799999999998887754 4 654 1222111 222223367999987
Q ss_pred eCCCcccHHHHH-HhccCCCceEEEE
Q 027409 120 DCTSKDFARVLR-FARFSNKGAVLAF 144 (223)
Q Consensus 120 Da~K~~Y~~~f~-~~~~l~~GgvIV~ 144 (223)
+... .++ .+..+++||.++.
T Consensus 196 -~g~~----~~~~~~~~l~~~G~~v~ 216 (302)
T 1iz0_A 196 -VRGK----EVEESLGLLAHGGRLVY 216 (302)
T ss_dssp -CSCT----THHHHHTTEEEEEEEEE
T ss_pred -CCHH----HHHHHHHhhccCCEEEE
Confidence 6542 344 4466678888775
No 304
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=94.15 E-value=0.056 Score=49.25 Aligned_cols=77 Identities=12% Similarity=-0.002 Sum_probs=56.9
Q ss_pred CeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHH---hcCC--C-CccE
Q 027409 43 KLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEV---MGEL--K-GVDF 116 (223)
Q Consensus 43 k~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~ev---L~~L--~-~fDf 116 (223)
..+|+..+|.|- -|.+++.. ..++|+|+.+|+||+.++.|+ .+ . +-.++++.|+-.++ |+.+ . ++|.
T Consensus 59 giyVD~TlG~GG--HS~~iL~~-lg~~GrVig~D~Dp~Al~~A~-rL--~-~~Rv~lv~~nF~~l~~~L~~~g~~~~vDg 131 (347)
T 3tka_A 59 GIYIDGTFGRGG--HSRLILSQ-LGEEGRLLAIDRDPQAIAVAK-TI--D-DPRFSIIHGPFSALGEYVAERDLIGKIDG 131 (347)
T ss_dssp CEEEESCCTTSH--HHHHHHTT-CCTTCEEEEEESCHHHHHHHT-TC--C-CTTEEEEESCGGGHHHHHHHTTCTTCEEE
T ss_pred CEEEEeCcCCCH--HHHHHHHh-CCCCCEEEEEECCHHHHHHHH-hh--c-CCcEEEEeCCHHHHHHHHHhcCCCCcccE
Confidence 578998888774 67677654 356799999999999999885 33 2 32399999987664 4443 2 5999
Q ss_pred EEEeCCCccc
Q 027409 117 LVVDCTSKDF 126 (223)
Q Consensus 117 VFIDa~K~~Y 126 (223)
|+.|-.-+.+
T Consensus 132 ILfDLGVSS~ 141 (347)
T 3tka_A 132 ILLDLGVSSP 141 (347)
T ss_dssp EEEECSCCHH
T ss_pred EEECCccCHH
Confidence 9999875544
No 305
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=94.03 E-value=0.12 Score=45.94 Aligned_cols=96 Identities=19% Similarity=0.114 Sum_probs=61.9
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCc-EEEEEeCCchHHHHHHHHHHhhcCce--EEEE--ecchHHHhcCC--CC
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCA-RHVCIVPDERSRLAYVKAMYDVVGWV--SEVI--VRQAEEVMGEL--KG 113 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g-~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li--~GdA~evL~~L--~~ 113 (223)
.-.+||=+|++ |.+..++.+|++. +. +|+.++.++++.+.|+ +. |.. |... ..+..+.+.++ +.
T Consensus 193 ~g~~VlV~GaG-~vG~~a~q~a~~~---Ga~~Vi~~~~~~~~~~~a~----~l-Ga~~vi~~~~~~~~~~~~i~~~~~gg 263 (378)
T 3uko_A 193 PGSNVAIFGLG-TVGLAVAEGAKTA---GASRIIGIDIDSKKYETAK----KF-GVNEFVNPKDHDKPIQEVIVDLTDGG 263 (378)
T ss_dssp TTCCEEEECCS-HHHHHHHHHHHHH---TCSCEEEECSCTTHHHHHH----TT-TCCEEECGGGCSSCHHHHHHHHTTSC
T ss_pred CCCEEEEECCC-HHHHHHHHHHHHc---CCCeEEEEcCCHHHHHHHH----Hc-CCcEEEccccCchhHHHHHHHhcCCC
Confidence 45789999973 5555666776653 44 7999999999988775 44 665 3322 23445555544 37
Q ss_pred ccEEEEeCCCcccHHHHH-HhccCCCc-eEEEEeCCC
Q 027409 114 VDFLVVDCTSKDFARVLR-FARFSNKG-AVLAFKNAF 148 (223)
Q Consensus 114 fDfVFIDa~K~~Y~~~f~-~~~~l~~G-gvIV~DNvl 148 (223)
+|.|| |+.- ....++ .++.+++| |.++.=.+.
T Consensus 264 ~D~vi-d~~g--~~~~~~~~~~~l~~g~G~iv~~G~~ 297 (378)
T 3uko_A 264 VDYSF-ECIG--NVSVMRAALECCHKGWGTSVIVGVA 297 (378)
T ss_dssp BSEEE-ECSC--CHHHHHHHHHTBCTTTCEEEECSCC
T ss_pred CCEEE-ECCC--CHHHHHHHHHHhhccCCEEEEEccc
Confidence 99986 5542 344565 55777885 887764443
No 306
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=94.01 E-value=0.053 Score=47.21 Aligned_cols=95 Identities=13% Similarity=0.028 Sum_probs=60.8
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCC---CCc
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGEL---KGV 114 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L---~~f 114 (223)
..-++||-+|.+.|.+..++.+|.+ .+.+|+.++.++++.+.+++ . |.. +.....+..+.+.++ ..+
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~---~Ga~Vi~~~~~~~~~~~~~~----~-ga~~~~~~~~~~~~~~~~~~~~~~g~ 218 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKM---KGAHTIAVASTDEKLKIAKE----Y-GAEYLINASKEDILRQVLKFTNGKGV 218 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHH---TTCEEEEEESSHHHHHHHHH----T-TCSEEEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHH----c-CCcEEEeCCCchHHHHHHHHhCCCCc
Confidence 3457899999665654455566544 36799999999998877755 4 544 333334555555443 269
Q ss_pred cEEEEeCCCcccHHHHH-HhccCCCceEEEEeC
Q 027409 115 DFLVVDCTSKDFARVLR-FARFSNKGAVLAFKN 146 (223)
Q Consensus 115 DfVFIDa~K~~Y~~~f~-~~~~l~~GgvIV~DN 146 (223)
|+|| |+.-. ..++ .+..+++||.+|.=.
T Consensus 219 D~vi-d~~g~---~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 219 DASF-DSVGK---DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp EEEE-ECCGG---GGHHHHHHHEEEEEEEEECC
T ss_pred eEEE-ECCCh---HHHHHHHHHhccCCEEEEEc
Confidence 9876 44433 3444 445668888888643
No 307
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=93.97 E-value=0.098 Score=46.67 Aligned_cols=97 Identities=11% Similarity=0.150 Sum_probs=66.7
Q ss_pred CCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcC-CC--CccEEE
Q 027409 42 AKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGE-LK--GVDFLV 118 (223)
Q Consensus 42 ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~-L~--~fDfVF 118 (223)
+.++||+-||+|- .++.+..+... --.+..+|+|+...+..+.|+... .++.||..++... +. .+|+++
T Consensus 2 ~~~v~dLFaG~Gg--~~~g~~~~G~~-~~~v~~~E~d~~a~~~~~~N~~~~-----~~~~~Di~~~~~~~~~~~~~D~l~ 73 (343)
T 1g55_A 2 PLRVLELYSGVGG--MHHALRESCIP-AQVVAAIDVNTVANEVYKYNFPHT-----QLLAKTIEGITLEEFDRLSFDMIL 73 (343)
T ss_dssp CEEEEEETCTTCH--HHHHHHHHTCS-EEEEEEECCCHHHHHHHHHHCTTS-----CEECSCGGGCCHHHHHHHCCSEEE
T ss_pred CCeEEEeCcCccH--HHHHHHHCCCC-ceEEEEEeCCHHHHHHHHHhcccc-----ccccCCHHHccHhHcCcCCcCEEE
Confidence 4579999999995 66666654210 026899999999999999998765 4678888876532 32 699999
Q ss_pred EeCC----------C-------cccHHHHHHhccCC--CceEEEEeCC
Q 027409 119 VDCT----------S-------KDFARVLRFARFSN--KGAVLAFKNA 147 (223)
Q Consensus 119 IDa~----------K-------~~Y~~~f~~~~~l~--~GgvIV~DNv 147 (223)
.+-- + ..+.++++.+..++ |--+ +..||
T Consensus 74 ~gpPCq~fS~ag~~~g~~d~r~~l~~~~~~~i~~~~~~P~~~-~~ENV 120 (343)
T 1g55_A 74 MSPPCQPFTRIGRQGDMTDSRTNSFLHILDILPRLQKLPKYI-LLENV 120 (343)
T ss_dssp ECCC------------------CHHHHHHHHGGGCSSCCSEE-EEEEE
T ss_pred EcCCCcchhhcCCcCCccCccchHHHHHHHHHHHhcCCCCEE-EEeCC
Confidence 9843 1 23455666666555 7654 55666
No 308
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=93.94 E-value=0.38 Score=42.27 Aligned_cols=96 Identities=9% Similarity=-0.017 Sum_probs=59.1
Q ss_pred hcCCCeEEEEccCcchHHHHHHHHHhcCCCCc-EEEEEeCCchHHHHHHHHHHhhcCce--EEEE---ecchHHHhcCC-
Q 027409 39 GWNAKLIVEAWTHGGPITTSIGLAIAARHTCA-RHVCIVPDERSRLAYVKAMYDVVGWV--SEVI---VRQAEEVMGEL- 111 (223)
Q Consensus 39 ~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g-~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li---~GdA~evL~~L- 111 (223)
...-.+||-+|+| |.+..++.+|.+. +. +|+.++.++++.+.|++ . |.. +... ..+..+.+.++
T Consensus 169 ~~~g~~VlV~GaG-~vG~~aiqlak~~---Ga~~Vi~~~~~~~~~~~a~~----l-Ga~~vi~~~~~~~~~~~~~i~~~~ 239 (356)
T 1pl8_A 169 VTLGHKVLVCGAG-PIGMVTLLVAKAM---GAAQVVVTDLSATRLSKAKE----I-GADLVLQISKESPQEIARKVEGQL 239 (356)
T ss_dssp CCTTCEEEEECCS-HHHHHHHHHHHHT---TCSEEEEEESCHHHHHHHHH----T-TCSEEEECSSCCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCC-HHHHHHHHHHHHc---CCCEEEEECCCHHHHHHHHH----h-CCCEEEcCcccccchHHHHHHHHh
Confidence 3445789999964 5544666776542 55 89999999998887754 4 654 3322 12223333322
Q ss_pred -CCccEEEEeCCCcccHHHHH-HhccCCCceEEEEeC
Q 027409 112 -KGVDFLVVDCTSKDFARVLR-FARFSNKGAVLAFKN 146 (223)
Q Consensus 112 -~~fDfVFIDa~K~~Y~~~f~-~~~~l~~GgvIV~DN 146 (223)
..+|+|| |+.- ....++ .++.+++||.++.=.
T Consensus 240 ~~g~D~vi-d~~g--~~~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 240 GCKPEVTI-ECTG--AEASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp TSCCSEEE-ECSC--CHHHHHHHHHHSCTTCEEEECS
T ss_pred CCCCCEEE-ECCC--ChHHHHHHHHHhcCCCEEEEEe
Confidence 4799986 5542 233444 456778899887643
No 309
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=93.90 E-value=0.11 Score=44.87 Aligned_cols=92 Identities=11% Similarity=-0.036 Sum_probs=55.5
Q ss_pred CeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCC--CCccEEE
Q 027409 43 KLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGEL--KGVDFLV 118 (223)
Q Consensus 43 k~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L--~~fDfVF 118 (223)
.+||-+|.+.|.+..++.+|.+. +.+|+.++.++++.+.+++ . |.. +.....+ .+.+..+ ..+|+||
T Consensus 151 ~~VlV~Ga~G~vG~~~~q~a~~~---Ga~vi~~~~~~~~~~~~~~----l-Ga~~~i~~~~~~-~~~~~~~~~~~~d~vi 221 (328)
T 1xa0_A 151 GPVLVTGATGGVGSLAVSMLAKR---GYTVEASTGKAAEHDYLRV----L-GAKEVLAREDVM-AERIRPLDKQRWAAAV 221 (328)
T ss_dssp CCEEESSTTSHHHHHHHHHHHHT---TCCEEEEESCTTCHHHHHH----T-TCSEEEECC----------CCSCCEEEEE
T ss_pred ceEEEecCCCHHHHHHHHHHHHC---CCEEEEEECCHHHHHHHHH----c-CCcEEEecCCcH-HHHHHHhcCCcccEEE
Confidence 37999998667655666776543 5789999999998887764 4 654 3322221 2334444 3699875
Q ss_pred EeCCCcccHHHHH-HhccCCCceEEEEeCC
Q 027409 119 VDCTSKDFARVLR-FARFSNKGAVLAFKNA 147 (223)
Q Consensus 119 IDa~K~~Y~~~f~-~~~~l~~GgvIV~DNv 147 (223)
|+.-.. .++ .+..+++||.++.=..
T Consensus 222 -d~~g~~---~~~~~~~~l~~~G~~v~~G~ 247 (328)
T 1xa0_A 222 -DPVGGR---TLATVLSRMRYGGAVAVSGL 247 (328)
T ss_dssp -ECSTTT---THHHHHHTEEEEEEEEECSC
T ss_pred -ECCcHH---HHHHHHHhhccCCEEEEEee
Confidence 665432 343 5566788898876443
No 310
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=93.82 E-value=0.15 Score=45.42 Aligned_cols=97 Identities=14% Similarity=0.062 Sum_probs=60.7
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCc-EEEEEeCCchHHHHHHHHHHhhcCce-EEEEecc-hHHHhcCC---CC
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCA-RHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVRQ-AEEVMGEL---KG 113 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g-~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~Gd-A~evL~~L---~~ 113 (223)
..-++||-+|+ .|.+..++.+|++. ++ +|+.++.++++.+.|++ . |.. |.....+ ..+.+.++ ..
T Consensus 184 ~~g~~VlV~Ga-G~vG~~aiqlAk~~---Ga~~Vi~~~~~~~~~~~a~~----l-Ga~~i~~~~~~~~~~~v~~~t~g~g 254 (398)
T 1kol_A 184 GPGSTVYVAGA-GPVGLAAAASARLL---GAAVVIVGDLNPARLAHAKA----Q-GFEIADLSLDTPLHEQIAALLGEPE 254 (398)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHT---TCSEEEEEESCHHHHHHHHH----T-TCEEEETTSSSCHHHHHHHHHSSSC
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHC---CCCeEEEEcCCHHHHHHHHH----c-CCcEEccCCcchHHHHHHHHhCCCC
Confidence 34578999996 46555666777653 55 79999999998888764 4 765 3322223 34444443 26
Q ss_pred ccEEEEeCCCccc-------------HHHHH-HhccCCCceEEEEeC
Q 027409 114 VDFLVVDCTSKDF-------------ARVLR-FARFSNKGAVLAFKN 146 (223)
Q Consensus 114 fDfVFIDa~K~~Y-------------~~~f~-~~~~l~~GgvIV~DN 146 (223)
+|+|| |+.-... ...++ .++.+++||.++.=-
T Consensus 255 ~Dvvi-d~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 255 VDCAV-DAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp EEEEE-ECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred CCEEE-ECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence 99886 6543321 23454 456678889887643
No 311
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=93.79 E-value=0.15 Score=45.77 Aligned_cols=98 Identities=14% Similarity=0.086 Sum_probs=62.6
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCc-EEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCC---CCc
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCA-RHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGEL---KGV 114 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g-~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L---~~f 114 (223)
.-.+||=+|+ .|.+..++.+|++. +. +|+.++.++++.+.|++ . |.. +.....|..+.+.++ ..+
T Consensus 213 ~g~~VlV~Ga-G~vG~~aiqlak~~---Ga~~Vi~~~~~~~~~~~~~~----l-Ga~~vi~~~~~~~~~~i~~~t~g~g~ 283 (404)
T 3ip1_A 213 PGDNVVILGG-GPIGLAAVAILKHA---GASKVILSEPSEVRRNLAKE----L-GADHVIDPTKENFVEAVLDYTNGLGA 283 (404)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHT---TCSEEEEECSCHHHHHHHHH----H-TCSEEECTTTSCHHHHHHHHTTTCCC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHc---CCCEEEEECCCHHHHHHHHH----c-CCCEEEcCCCCCHHHHHHHHhCCCCC
Confidence 4468999997 46655666776543 55 89999999999888865 3 544 333334555555554 269
Q ss_pred cEEEEeCCCc---ccHHHHHHh-ccCCCceEEEEeCCC
Q 027409 115 DFLVVDCTSK---DFARVLRFA-RFSNKGAVLAFKNAF 148 (223)
Q Consensus 115 DfVFIDa~K~---~Y~~~f~~~-~~l~~GgvIV~DNvl 148 (223)
|+|| |+.-. .+...++.+ +.+++||.++.=-..
T Consensus 284 D~vi-d~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~ 320 (404)
T 3ip1_A 284 KLFL-EATGVPQLVWPQIEEVIWRARGINATVAIVARA 320 (404)
T ss_dssp SEEE-ECSSCHHHHHHHHHHHHHHCSCCCCEEEECSCC
T ss_pred CEEE-ECCCCcHHHHHHHHHHHHhccCCCcEEEEeCCC
Confidence 9887 55433 233444444 455888988875443
No 312
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=93.56 E-value=0.32 Score=44.62 Aligned_cols=86 Identities=9% Similarity=-0.024 Sum_probs=58.3
Q ss_pred CCcHHHHHHHHHHHHh----------cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhc
Q 027409 24 IKESGVAELLSAMAAG----------WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVV 93 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~----------~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~ 93 (223)
..+..+=.+..++... ..=.++|++|++.|- .|-.++. .+|+|+.||+.+-. . .+.
T Consensus 184 ~pSRa~lKL~Ea~~~F~~~~~~~~~l~~G~~vlDLGAaPGG--WT~~l~~----rg~~V~aVD~~~l~-~----~l~--- 249 (375)
T 4auk_A 184 APSRSTLKLEEAFHVFIPADEWDERLANGMWAVDLGACPGG--WTYQLVK----RNMWVYSVDNGPMA-Q----SLM--- 249 (375)
T ss_dssp SSCTTHHHHHHHHHHHSCGGGHHHHSCTTCEEEEETCTTCH--HHHHHHH----TTCEEEEECSSCCC-H----HHH---
T ss_pred CCCHHHHHHHHHHHhccchhhhhccCCCCCEEEEeCcCCCH--HHHHHHH----CCCEEEEEEhhhcC-h----hhc---
Confidence 5566665655555442 345689999999995 5534432 37899999986421 1 111
Q ss_pred Cce-EEEEecchHHHhcCCCCccEEEEeCCC
Q 027409 94 GWV-SEVIVRQAEEVMGELKGVDFLVVDCTS 123 (223)
Q Consensus 94 G~~-I~li~GdA~evL~~L~~fDfVFIDa~K 123 (223)
... |+++.+||.+..+.-.+||.|+.|-.-
T Consensus 250 ~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~~ 280 (375)
T 4auk_A 250 DTGQVTWLREDGFKFRPTRSNISWMVCDMVE 280 (375)
T ss_dssp TTTCEEEECSCTTTCCCCSSCEEEEEECCSS
T ss_pred cCCCeEEEeCccccccCCCCCcCEEEEcCCC
Confidence 223 899999999876654589999999864
No 313
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=93.55 E-value=0.099 Score=45.38 Aligned_cols=95 Identities=13% Similarity=0.011 Sum_probs=61.0
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCC---CCcc
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGEL---KGVD 115 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L---~~fD 115 (223)
.-++||=+|.+.|.+..++.+|.+. +.+|+.++.++++.+.+++ . |.. ++....+..+.+.++ ..+|
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~---Ga~Vi~~~~~~~~~~~~~~----~-Ga~~~~~~~~~~~~~~~~~~~~~~g~D 211 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKAL---GAKLIGTVSSPEKAAHAKA----L-GAWETIDYSHEDVAKRVLELTDGKKCP 211 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHH---TCEEEEEESSHHHHHHHHH----H-TCSEEEETTTSCHHHHHHHHTTTCCEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHH----c-CCCEEEeCCCccHHHHHHHHhCCCCce
Confidence 4578999995556544555665542 6799999999998887764 4 544 333344555555443 2699
Q ss_pred EEEEeCCCcccHHHHH-HhccCCCceEEEEeCC
Q 027409 116 FLVVDCTSKDFARVLR-FARFSNKGAVLAFKNA 147 (223)
Q Consensus 116 fVFIDa~K~~Y~~~f~-~~~~l~~GgvIV~DNv 147 (223)
+|| |+.-. ..++ .+..+++||.+|.=..
T Consensus 212 vvi-d~~g~---~~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 212 VVY-DGVGQ---DTWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp EEE-ESSCG---GGHHHHHTTEEEEEEEEECCC
T ss_pred EEE-ECCCh---HHHHHHHHHhcCCCEEEEEec
Confidence 876 55433 3444 5567788898887543
No 314
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=93.54 E-value=0.13 Score=45.48 Aligned_cols=95 Identities=11% Similarity=0.070 Sum_probs=60.3
Q ss_pred hcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCC--CCc
Q 027409 39 GWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGEL--KGV 114 (223)
Q Consensus 39 ~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L--~~f 114 (223)
...-++||-+|.+.|.+..++.+|.+ .+.+|+.++.++++.+.+++ . |.. +.....+..+.+.++ ..+
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~---~Ga~Vi~~~~~~~~~~~~~~----~-Ga~~~~~~~~~~~~~~~~~~~~~g~ 232 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKK---AKCHVIGTCSSDEKSAFLKS----L-GCDRPINYKTEPVGTVLKQEYPEGV 232 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHH---TTCEEEEEESSHHHHHHHHH----T-TCSEEEETTTSCHHHHHHHHCTTCE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHh---CCCEEEEEECCHHHHHHHHH----c-CCcEEEecCChhHHHHHHHhcCCCC
Confidence 34557999999555654466666654 26799999999988887765 4 654 322233444444433 369
Q ss_pred cEEEEeCCCcccHHHHH-HhccCCCceEEEEe
Q 027409 115 DFLVVDCTSKDFARVLR-FARFSNKGAVLAFK 145 (223)
Q Consensus 115 DfVFIDa~K~~Y~~~f~-~~~~l~~GgvIV~D 145 (223)
|+|| |+.-. ..++ .++.+++||.+|.=
T Consensus 233 D~vi-d~~g~---~~~~~~~~~l~~~G~iv~~ 260 (362)
T 2c0c_A 233 DVVY-ESVGG---AMFDLAVDALATKGRLIVI 260 (362)
T ss_dssp EEEE-ECSCT---HHHHHHHHHEEEEEEEEEC
T ss_pred CEEE-ECCCH---HHHHHHHHHHhcCCEEEEE
Confidence 9986 55433 3554 45666788887753
No 315
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=93.53 E-value=0.16 Score=44.95 Aligned_cols=96 Identities=15% Similarity=0.019 Sum_probs=61.2
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCc-EEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCC--CCcc
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCA-RHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGEL--KGVD 115 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g-~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L--~~fD 115 (223)
.-++||-+|++ |.+..++.+|++. ++ +|+.++.++++.+.|++ . |.. +.....|..+.+.++ +.+|
T Consensus 190 ~g~~VlV~GaG-~vG~~a~qlak~~---Ga~~Vi~~~~~~~~~~~a~~----l-Ga~~vi~~~~~~~~~~~~~~~~gg~D 260 (371)
T 1f8f_A 190 PASSFVTWGAG-AVGLSALLAAKVC---GASIIIAVDIVESRLELAKQ----L-GATHVINSKTQDPVAAIKEITDGGVN 260 (371)
T ss_dssp TTCEEEEESCS-HHHHHHHHHHHHH---TCSEEEEEESCHHHHHHHHH----H-TCSEEEETTTSCHHHHHHHHTTSCEE
T ss_pred CCCEEEEECCC-HHHHHHHHHHHHc---CCCeEEEECCCHHHHHHHHH----c-CCCEEecCCccCHHHHHHHhcCCCCc
Confidence 34789999964 5444666776653 55 79999999998888764 3 544 333334555555443 2699
Q ss_pred EEEEeCCCcccHHHHH-HhccCCCceEEEEeCCC
Q 027409 116 FLVVDCTSKDFARVLR-FARFSNKGAVLAFKNAF 148 (223)
Q Consensus 116 fVFIDa~K~~Y~~~f~-~~~~l~~GgvIV~DNvl 148 (223)
+|| |+.- ....++ .++.+++||.++.=...
T Consensus 261 ~vi-d~~g--~~~~~~~~~~~l~~~G~iv~~G~~ 291 (371)
T 1f8f_A 261 FAL-ESTG--SPEILKQGVDALGILGKIAVVGAP 291 (371)
T ss_dssp EEE-ECSC--CHHHHHHHHHTEEEEEEEEECCCC
T ss_pred EEE-ECCC--CHHHHHHHHHHHhcCCEEEEeCCC
Confidence 886 5542 234554 45677888988864443
No 316
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=93.50 E-value=0.48 Score=41.07 Aligned_cols=96 Identities=10% Similarity=-0.064 Sum_probs=63.2
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCC-C--Ccc
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGEL-K--GVD 115 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L-~--~fD 115 (223)
.-.+||=+|++.+ ...++.+|.. ..+.+|+.++.++++.+.+++ . |.. |.....|..+.+.++ + .+|
T Consensus 163 ~g~~VlV~GaG~~-g~~a~~~a~~--~~g~~Vi~~~~~~~r~~~~~~----~-Ga~~~i~~~~~~~~~~v~~~t~g~g~d 234 (348)
T 4eez_A 163 PGDWQVIFGAGGL-GNLAIQYAKN--VFGAKVIAVDINQDKLNLAKK----I-GADVTINSGDVNPVDEIKKITGGLGVQ 234 (348)
T ss_dssp TTCEEEEECCSHH-HHHHHHHHHH--TSCCEEEEEESCHHHHHHHHH----T-TCSEEEEC-CCCHHHHHHHHTTSSCEE
T ss_pred CCCEEEEEcCCCc-cHHHHHHHHH--hCCCEEEEEECcHHHhhhhhh----c-CCeEEEeCCCCCHHHHhhhhcCCCCce
Confidence 3468999998643 3444444433 236799999999998776664 3 544 666777877766654 2 688
Q ss_pred EEEEeCCCcccHHHHH-HhccCCCceEEEEeCC
Q 027409 116 FLVVDCTSKDFARVLR-FARFSNKGAVLAFKNA 147 (223)
Q Consensus 116 fVFIDa~K~~Y~~~f~-~~~~l~~GgvIV~DNv 147 (223)
.+|.++.- ...++ .+..+++||.++.=-+
T Consensus 235 ~~~~~~~~---~~~~~~~~~~l~~~G~~v~~g~ 264 (348)
T 4eez_A 235 SAIVCAVA---RIAFEQAVASLKPMGKMVAVAV 264 (348)
T ss_dssp EEEECCSC---HHHHHHHHHTEEEEEEEEECCC
T ss_pred EEEEeccC---cchhheeheeecCCceEEEEec
Confidence 88888753 33444 4567788888876543
No 317
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=93.37 E-value=0.026 Score=48.13 Aligned_cols=49 Identities=12% Similarity=0.146 Sum_probs=34.1
Q ss_pred EEEEecchHHHhcCCC--CccEEEEeCC--Cc-----------ccHHHH----HHh-ccCCCceEEEEe
Q 027409 97 SEVIVRQAEEVMGELK--GVDFLVVDCT--SK-----------DFARVL----RFA-RFSNKGAVLAFK 145 (223)
Q Consensus 97 I~li~GdA~evL~~L~--~fDfVFIDa~--K~-----------~Y~~~f----~~~-~~l~~GgvIV~D 145 (223)
.+++.||+++.|+.+. .||+||+|-- .. .|..++ +.+ +.|++||+|++-
T Consensus 5 ~~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~ 73 (260)
T 1g60_A 5 NKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIF 73 (260)
T ss_dssp SSEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CeEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 4689999999998873 7999999962 11 222233 322 567899988765
No 318
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=93.36 E-value=0.094 Score=45.60 Aligned_cols=94 Identities=20% Similarity=0.134 Sum_probs=58.2
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCC---CCc
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGEL---KGV 114 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L---~~f 114 (223)
..-++||-+|.+.|.+..++.+|.+ .+.+|+.++.++++.+.+++ . |.. +.....+..+.+.++ ..+
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~---~G~~Vi~~~~~~~~~~~~~~----~-g~~~~~d~~~~~~~~~i~~~~~~~~~ 215 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARH---LGATVIGTVSTEEKAETARK----L-GCHHTINYSTQDFAEVVREITGGKGV 215 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHH---TTCEEEEEESSHHHHHHHHH----H-TCSEEEETTTSCHHHHHHHHHTTCCE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHH----c-CCCEEEECCCHHHHHHHHHHhCCCCC
Confidence 3457899999655653355555543 36799999999988887765 3 443 333334444444432 369
Q ss_pred cEEEEeCCCcccHHHHH-HhccCCCceEEEEe
Q 027409 115 DFLVVDCTSKDFARVLR-FARFSNKGAVLAFK 145 (223)
Q Consensus 115 DfVFIDa~K~~Y~~~f~-~~~~l~~GgvIV~D 145 (223)
|.|| |+.-. ..++ .+..+++||.+|.=
T Consensus 216 d~vi-~~~g~---~~~~~~~~~l~~~G~iv~~ 243 (333)
T 1wly_A 216 DVVY-DSIGK---DTLQKSLDCLRPRGMCAAY 243 (333)
T ss_dssp EEEE-ECSCT---TTHHHHHHTEEEEEEEEEC
T ss_pred eEEE-ECCcH---HHHHHHHHhhccCCEEEEE
Confidence 9887 55433 3444 44666788887753
No 319
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.31 E-value=0.2 Score=38.23 Aligned_cols=91 Identities=14% Similarity=0.084 Sum_probs=57.6
Q ss_pred CeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchH--HHhcCC--CCccEEE
Q 027409 43 KLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAE--EVMGEL--KGVDFLV 118 (223)
Q Consensus 43 k~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~--evL~~L--~~fDfVF 118 (223)
.+|+=+|+ |..+..++- .....+-.++-+|.|++..+.+++ . |. .++.||+. ++|.+. ...|.|+
T Consensus 8 ~~viIiG~--G~~G~~la~--~L~~~g~~v~vid~~~~~~~~~~~----~-g~--~~i~gd~~~~~~l~~a~i~~ad~vi 76 (140)
T 3fwz_A 8 NHALLVGY--GRVGSLLGE--KLLASDIPLVVIETSRTRVDELRE----R-GV--RAVLGNAANEEIMQLAHLECAKWLI 76 (140)
T ss_dssp SCEEEECC--SHHHHHHHH--HHHHTTCCEEEEESCHHHHHHHHH----T-TC--EEEESCTTSHHHHHHTTGGGCSEEE
T ss_pred CCEEEECc--CHHHHHHHH--HHHHCCCCEEEEECCHHHHHHHHH----c-CC--CEEECCCCCHHHHHhcCcccCCEEE
Confidence 57888887 554455443 333345689999999998776653 4 54 67889985 466654 5799998
Q ss_pred EeCCCcccHH-HHHHhccCCCceEEEE
Q 027409 119 VDCTSKDFAR-VLRFARFSNKGAVLAF 144 (223)
Q Consensus 119 IDa~K~~Y~~-~f~~~~~l~~GgvIV~ 144 (223)
+-.....-.. ....++.+.++.-||+
T Consensus 77 ~~~~~~~~n~~~~~~a~~~~~~~~iia 103 (140)
T 3fwz_A 77 LTIPNGYEAGEIVASARAKNPDIEIIA 103 (140)
T ss_dssp ECCSCHHHHHHHHHHHHHHCSSSEEEE
T ss_pred EECCChHHHHHHHHHHHHHCCCCeEEE
Confidence 8765443322 2234455555555554
No 320
>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A
Probab=93.29 E-value=0.49 Score=43.79 Aligned_cols=82 Identities=18% Similarity=0.070 Sum_probs=52.4
Q ss_pred hcCCCeEEEEccCcchH-HHHHHHHHhcCCCCcEEEEE--eCCch----------HHHHHHHHHHhhcCceEEEEecchH
Q 027409 39 GWNAKLIVEAWTHGGPI-TTSIGLAIAARHTCARHVCI--VPDER----------SRLAYVKAMYDVVGWVSEVIVRQAE 105 (223)
Q Consensus 39 ~~~ak~ILEIGT~~Gys-~Stl~la~A~~~~~g~i~TI--E~d~e----------~~~~Ar~~~~~a~G~~I~li~GdA~ 105 (223)
..+||++|=+|.+.||+ ++++++|.+ .++.++-+ +..+. ......+.++++ |.....+.+|+.
T Consensus 47 ~~~pK~vLVtGaSsGiGlA~AialAf~---~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~-G~~a~~i~~Dv~ 122 (401)
T 4ggo_A 47 AKAPKNVLVLGCSNGYGLASRITAAFG---YGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKRE-GLYSVTIDGDAF 122 (401)
T ss_dssp SCCCCEEEEESCSSHHHHHHHHHHHHH---HCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHH-TCCEEEEESCTT
T ss_pred cCCCCEEEEECCCCcHHHHHHHHHHhh---CCCCEEEEecCCcccccccccccchhHHHHHHHHHHc-CCCceeEeCCCC
Confidence 35899999999999985 233444422 14554444 43322 234556677888 888888899985
Q ss_pred H----------HhcCCCCccEEEEeCCCc
Q 027409 106 E----------VMGELKGVDFLVVDCTSK 124 (223)
Q Consensus 106 e----------vL~~L~~fDfVFIDa~K~ 124 (223)
+ +..+++++|++.--++..
T Consensus 123 d~e~i~~vi~~i~~~~G~IDiLVhS~A~~ 151 (401)
T 4ggo_A 123 SDEIKAQVIEEAKKKGIKFDLIVYSLASP 151 (401)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEEecccc
Confidence 2 223446789888777643
No 321
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=93.28 E-value=0.28 Score=43.64 Aligned_cols=92 Identities=22% Similarity=0.217 Sum_probs=57.1
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC-CCccEEE
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL-KGVDFLV 118 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L-~~fDfVF 118 (223)
..-.+||-+|++ |.+..++.+|.+. +.+|+.++.++++.+.|++ . |.. .++.-...+.+.++ ..+|+||
T Consensus 193 ~~g~~VlV~GaG-~vG~~aiqlak~~---Ga~Vi~~~~~~~~~~~a~~----l-Ga~-~vi~~~~~~~~~~~~~g~Dvvi 262 (369)
T 1uuf_A 193 GPGKKVGVVGIG-GLGHMGIKLAHAM---GAHVVAFTTSEAKREAAKA----L-GAD-EVVNSRNADEMAAHLKSFDFIL 262 (369)
T ss_dssp CTTCEEEEECCS-HHHHHHHHHHHHT---TCEEEEEESSGGGHHHHHH----H-TCS-EEEETTCHHHHHTTTTCEEEEE
T ss_pred CCCCEEEEECCC-HHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHH----c-CCc-EEeccccHHHHHHhhcCCCEEE
Confidence 344789999974 5544666676542 6789999999999888875 4 654 22222222333443 5799886
Q ss_pred EeCCCcccHHHHH-HhccCCCceEEEE
Q 027409 119 VDCTSKDFARVLR-FARFSNKGAVLAF 144 (223)
Q Consensus 119 IDa~K~~Y~~~f~-~~~~l~~GgvIV~ 144 (223)
|+.-.. ..++ .++.+++||.+|.
T Consensus 263 -d~~g~~--~~~~~~~~~l~~~G~iv~ 286 (369)
T 1uuf_A 263 -NTVAAP--HNLDDFTTLLKRDGTMTL 286 (369)
T ss_dssp -ECCSSC--CCHHHHHTTEEEEEEEEE
T ss_pred -ECCCCH--HHHHHHHHHhccCCEEEE
Confidence 554322 1233 4466678888775
No 322
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=93.26 E-value=0.45 Score=41.19 Aligned_cols=105 Identities=12% Similarity=0.055 Sum_probs=67.8
Q ss_pred HHHhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCC--
Q 027409 36 MAAGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGEL-- 111 (223)
Q Consensus 36 L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L-- 111 (223)
.+....-++||=+|+| |.+..++.+|++.. ..++++++.++++.+.|++ . |.. +.....|..+.+..+
T Consensus 155 ~~~~~~g~~VlV~GaG-~vG~~aiq~ak~~G--~~~vi~~~~~~~k~~~a~~----l-Ga~~~i~~~~~~~~~~~~~~~~ 226 (346)
T 4a2c_A 155 LAQGCENKNVIIIGAG-TIGLLAIQCAVALG--AKSVTAIDISSEKLALAKS----F-GAMQTFNSSEMSAPQMQSVLRE 226 (346)
T ss_dssp HTTCCTTSEEEEECCS-HHHHHHHHHHHHTT--CSEEEEEESCHHHHHHHHH----T-TCSEEEETTTSCHHHHHHHHGG
T ss_pred HhccCCCCEEEEECCC-CcchHHHHHHHHcC--CcEEEEEechHHHHHHHHH----c-CCeEEEeCCCCCHHHHHHhhcc
Confidence 3444566889999975 55556666665531 2468999999998887764 4 665 555556666655544
Q ss_pred -CCccEEEEeCCCcccHHHHH-HhccCCCceEEEEeCCCCCC
Q 027409 112 -KGVDFLVVDCTSKDFARVLR-FARFSNKGAVLAFKNAFQRS 151 (223)
Q Consensus 112 -~~fDfVFIDa~K~~Y~~~f~-~~~~l~~GgvIV~DNvl~~g 151 (223)
..+|.||--.. ....++ .+..+++||.++.--....+
T Consensus 227 ~~g~d~v~d~~G---~~~~~~~~~~~l~~~G~~v~~g~~~~~ 265 (346)
T 4a2c_A 227 LRFNQLILETAG---VPQTVELAVEIAGPHAQLALVGTLHQD 265 (346)
T ss_dssp GCSSEEEEECSC---SHHHHHHHHHHCCTTCEEEECCCCSSC
T ss_pred cCCccccccccc---ccchhhhhhheecCCeEEEEEeccCCC
Confidence 46887664443 334555 44677889998876665443
No 323
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=93.25 E-value=0.13 Score=44.68 Aligned_cols=97 Identities=15% Similarity=0.081 Sum_probs=61.3
Q ss_pred HhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCC--CC
Q 027409 38 AGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGEL--KG 113 (223)
Q Consensus 38 ~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L--~~ 113 (223)
+...-++||-+|++.|.+..++.+|.+ .+.+|+.++.++++.+.+. ++. |.. +.....+..+.+.++ ..
T Consensus 146 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~---~Ga~Vi~~~~~~~~~~~~~---~~~-g~~~~~~~~~~~~~~~~~~~~~~~ 218 (336)
T 4b7c_A 146 QPKNGETVVISGAAGAVGSVAGQIARL---KGCRVVGIAGGAEKCRFLV---EEL-GFDGAIDYKNEDLAAGLKRECPKG 218 (336)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHH---TTCEEEEEESSHHHHHHHH---HTT-CCSEEEETTTSCHHHHHHHHCTTC
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHH---HHc-CCCEEEECCCHHHHHHHHHhcCCC
Confidence 344567899999876654455555543 3679999999998877662 234 554 333334555545443 36
Q ss_pred ccEEEEeCCCcccHHHHH-HhccCCCceEEEEe
Q 027409 114 VDFLVVDCTSKDFARVLR-FARFSNKGAVLAFK 145 (223)
Q Consensus 114 fDfVFIDa~K~~Y~~~f~-~~~~l~~GgvIV~D 145 (223)
+|+|| |+.-. ..++ .+..+++||.+|.=
T Consensus 219 ~d~vi-~~~g~---~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 219 IDVFF-DNVGG---EILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp EEEEE-ESSCH---HHHHHHHTTEEEEEEEEEC
T ss_pred ceEEE-ECCCc---chHHHHHHHHhhCCEEEEE
Confidence 99876 44432 3555 45677888988863
No 324
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=93.19 E-value=0.25 Score=43.66 Aligned_cols=93 Identities=19% Similarity=0.142 Sum_probs=59.1
Q ss_pred CCeEEEEccCcchHHHHHHHHHhcCCCCc-EEEEEeCCchHHHHHHHHHHhhcCce--EEEEe--cchHHHhcCC--CCc
Q 027409 42 AKLIVEAWTHGGPITTSIGLAIAARHTCA-RHVCIVPDERSRLAYVKAMYDVVGWV--SEVIV--RQAEEVMGEL--KGV 114 (223)
Q Consensus 42 ak~ILEIGT~~Gys~Stl~la~A~~~~~g-~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~--GdA~evL~~L--~~f 114 (223)
-++||-+|+ .|.+..++.+|++. +. +|+.++.++++.+.|++ . |.. ++... .+..+.+.++ +.+
T Consensus 196 g~~VlV~Ga-G~vG~~aiqlak~~---Ga~~Vi~~~~~~~~~~~a~~----l-Ga~~vi~~~~~~~~~~~~v~~~~~~g~ 266 (376)
T 1e3i_A 196 GSTCAVFGL-GCVGLSAIIGCKIA---GASRIIAIDINGEKFPKAKA----L-GATDCLNPRELDKPVQDVITELTAGGV 266 (376)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHT---TCSEEEEECSCGGGHHHHHH----T-TCSEEECGGGCSSCHHHHHHHHHTSCB
T ss_pred CCEEEEECC-CHHHHHHHHHHHHc---CCCeEEEEcCCHHHHHHHHH----h-CCcEEEccccccchHHHHHHHHhCCCc
Confidence 468999996 36555666776543 55 89999999999887764 4 654 22221 2344545443 379
Q ss_pred cEEEEeCCCcccHHHHH-HhccCCCc-eEEEEeC
Q 027409 115 DFLVVDCTSKDFARVLR-FARFSNKG-AVLAFKN 146 (223)
Q Consensus 115 DfVFIDa~K~~Y~~~f~-~~~~l~~G-gvIV~DN 146 (223)
|+|| |+.- ....++ .++.+++| |.+|.=.
T Consensus 267 Dvvi-d~~G--~~~~~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 267 DYSL-DCAG--TAQTLKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp SEEE-ESSC--CHHHHHHHHHTBCTTTCEEEECC
T ss_pred cEEE-ECCC--CHHHHHHHHHHhhcCCCEEEEEC
Confidence 9886 6542 234554 45777888 8877533
No 325
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=93.14 E-value=0.18 Score=44.37 Aligned_cols=93 Identities=17% Similarity=0.072 Sum_probs=57.5
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEec-chHHHhcCCCCccE
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVR-QAEEVMGELKGVDF 116 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~G-dA~evL~~L~~fDf 116 (223)
..-++||-+|+ .|.+..++.+|++. +.+|+.++.++++.+.|++ . |.. +..... +..+.+. ..+|+
T Consensus 178 ~~g~~VlV~Ga-G~vG~~~~qlak~~---Ga~Vi~~~~~~~~~~~~~~----l-Ga~~v~~~~~~~~~~~~~~--~~~D~ 246 (360)
T 1piw_A 178 GPGKKVGIVGL-GGIGSMGTLISKAM---GAETYVISRSSRKREDAMK----M-GADHYIATLEEGDWGEKYF--DTFDL 246 (360)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHH---TCEEEEEESSSTTHHHHHH----H-TCSEEEEGGGTSCHHHHSC--SCEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHC---CCEEEEEcCCHHHHHHHHH----c-CCCEEEcCcCchHHHHHhh--cCCCE
Confidence 34579999998 46544666776553 6789999999999888775 4 544 222222 3344333 47999
Q ss_pred EEEeCCCcccHHHHH-HhccCCCceEEEE
Q 027409 117 LVVDCTSKDFARVLR-FARFSNKGAVLAF 144 (223)
Q Consensus 117 VFIDa~K~~Y~~~f~-~~~~l~~GgvIV~ 144 (223)
|| |+.-......++ .+..+++||.++.
T Consensus 247 vi-d~~g~~~~~~~~~~~~~l~~~G~iv~ 274 (360)
T 1piw_A 247 IV-VCASSLTDIDFNIMPKAMKVGGRIVS 274 (360)
T ss_dssp EE-ECCSCSTTCCTTTGGGGEEEEEEEEE
T ss_pred EE-ECCCCCcHHHHHHHHHHhcCCCEEEE
Confidence 86 554320012233 3455677888775
No 326
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=93.11 E-value=0.21 Score=43.23 Aligned_cols=94 Identities=11% Similarity=0.035 Sum_probs=57.4
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEe-cchHHHhcCC--CCc
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIV-RQAEEVMGEL--KGV 114 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~-GdA~evL~~L--~~f 114 (223)
..-++||-.|++.|.+..++.++.+ .+.+|+.+++++++.+.++ +. |.. ++... .+..+.+.++ +.+
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~---~G~~V~~~~~~~~~~~~~~----~~-g~~~~~d~~~~~~~~~~~~~~~~~~~ 215 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKL---KGCKVVGAAGSDEKIAYLK----QI-GFDAAFNYKTVNSLEEALKKASPDGY 215 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHH---TTCEEEEEESSHHHHHHHH----HT-TCSEEEETTSCSCHHHHHHHHCTTCE
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHH----hc-CCcEEEecCCHHHHHHHHHHHhCCCC
Confidence 3457899999866653344444432 3679999999988877663 33 543 33222 3444444432 369
Q ss_pred cEEEEeCCCcccHHHHH-HhccCCCceEEEEe
Q 027409 115 DFLVVDCTSKDFARVLR-FARFSNKGAVLAFK 145 (223)
Q Consensus 115 DfVFIDa~K~~Y~~~f~-~~~~l~~GgvIV~D 145 (223)
|.+|--+. . ..++ .+..+++||.++.=
T Consensus 216 d~vi~~~g-~---~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 216 DCYFDNVG-G---EFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp EEEEESSC-H---HHHHHHHTTEEEEEEEEEC
T ss_pred eEEEECCC-h---HHHHHHHHHHhcCCEEEEE
Confidence 98865444 2 2354 45667888988753
No 327
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=93.09 E-value=0.14 Score=44.98 Aligned_cols=93 Identities=17% Similarity=0.103 Sum_probs=59.2
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCC-C--Cc
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGEL-K--GV 114 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L-~--~f 114 (223)
..-++||-+|.+.|.+..++.+|.+ .+.+|+.++.++++.+.+++ . |.. +... .+..+.+.++ + .+
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~---~Ga~Vi~~~~~~~~~~~~~~----~-ga~~v~~~~-~~~~~~v~~~~~~~g~ 228 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKG---MGAKVIAVVNRTAATEFVKS----V-GADIVLPLE-EGWAKAVREATGGAGV 228 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHH---TTCEEEEEESSGGGHHHHHH----H-TCSEEEESS-TTHHHHHHHHTTTSCE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHH---cCCEEEEEeCCHHHHHHHHh----c-CCcEEecCc-hhHHHHHHHHhCCCCc
Confidence 3457899999866654466666654 36799999999999887776 3 544 3333 4445555443 2 69
Q ss_pred cEEEEeCCCcccHHHHH-HhccCCCceEEEEe
Q 027409 115 DFLVVDCTSKDFARVLR-FARFSNKGAVLAFK 145 (223)
Q Consensus 115 DfVFIDa~K~~Y~~~f~-~~~~l~~GgvIV~D 145 (223)
|+||--+... .++ .+..+++||.+|.=
T Consensus 229 Dvvid~~g~~----~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 229 DMVVDPIGGP----AFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp EEEEESCC------CHHHHHHTEEEEEEEEEC
T ss_pred eEEEECCchh----HHHHHHHhhcCCCEEEEE
Confidence 9886444332 343 45666788887753
No 328
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=93.05 E-value=0.25 Score=43.60 Aligned_cols=95 Identities=18% Similarity=0.092 Sum_probs=60.4
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCc-EEEEEeCCchHHHHHHHHHHhhcCce--EEEEe--cchHHHhcCC--CC
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCA-RHVCIVPDERSRLAYVKAMYDVVGWV--SEVIV--RQAEEVMGEL--KG 113 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g-~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~--GdA~evL~~L--~~ 113 (223)
.-++||-+|++ |.+..++.+|++. ++ +|+.++.++++.+.|++ . |.. ++... .+..+.+.++ +.
T Consensus 191 ~g~~VlV~GaG-~vG~~aiqlak~~---Ga~~Vi~~~~~~~~~~~a~~----l-Ga~~vi~~~~~~~~~~~~i~~~t~gg 261 (373)
T 1p0f_A 191 PGSTCAVFGLG-GVGFSAIVGCKAA---GASRIIGVGTHKDKFPKAIE----L-GATECLNPKDYDKPIYEVICEKTNGG 261 (373)
T ss_dssp TTCEEEEECCS-HHHHHHHHHHHHH---TCSEEEEECSCGGGHHHHHH----T-TCSEEECGGGCSSCHHHHHHHHTTSC
T ss_pred CCCEEEEECCC-HHHHHHHHHHHHc---CCCeEEEECCCHHHHHHHHH----c-CCcEEEecccccchHHHHHHHHhCCC
Confidence 34789999963 6555666777653 55 89999999999888764 4 654 22221 2344545443 37
Q ss_pred ccEEEEeCCCcccHHHHH-HhccCCCc-eEEEEeCC
Q 027409 114 VDFLVVDCTSKDFARVLR-FARFSNKG-AVLAFKNA 147 (223)
Q Consensus 114 fDfVFIDa~K~~Y~~~f~-~~~~l~~G-gvIV~DNv 147 (223)
+|+|| |+.- ....++ .+..+++| |.+|.=..
T Consensus 262 ~Dvvi-d~~g--~~~~~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 262 VDYAV-ECAG--RIETMMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp BSEEE-ECSC--CHHHHHHHHHTBCTTTCEEEECCC
T ss_pred CCEEE-ECCC--CHHHHHHHHHHHhcCCCEEEEEcc
Confidence 99886 5542 234454 45777888 88875443
No 329
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=93.04 E-value=0.26 Score=44.07 Aligned_cols=99 Identities=11% Similarity=-0.017 Sum_probs=56.4
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCCCCccEEEE
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGELKGVDFLVV 119 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L~~fDfVFI 119 (223)
.++++||=+|+| |.+..++.++ ..-+.+|+-+++++++.+.+++.+... +..+.-+..+.-..+..+|+| |
T Consensus 165 l~~~~VlViGaG-gvG~~aa~~a---~~~Ga~V~v~dr~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~DvV-I 235 (361)
T 1pjc_A 165 VKPGKVVILGGG-VVGTEAAKMA---VGLGAQVQIFDINVERLSYLETLFGSR----VELLYSNSAEIETAVAEADLL-I 235 (361)
T ss_dssp BCCCEEEEECCS-HHHHHHHHHH---HHTTCEEEEEESCHHHHHHHHHHHGGG----SEEEECCHHHHHHHHHTCSEE-E
T ss_pred CCCCEEEEECCC-HHHHHHHHHH---HhCCCEEEEEeCCHHHHHHHHHhhCce----eEeeeCCHHHHHHHHcCCCEE-E
Confidence 567999999984 5422222332 223569999999999988888776543 333332222221222369988 5
Q ss_pred eCCCcc---cHHH-H-HHhccCCCceEEEEeCCC
Q 027409 120 DCTSKD---FARV-L-RFARFSNKGAVLAFKNAF 148 (223)
Q Consensus 120 Da~K~~---Y~~~-f-~~~~~l~~GgvIV~DNvl 148 (223)
++.... .+.+ . +.+..+++||+|+ |=..
T Consensus 236 ~~~~~~~~~~~~li~~~~~~~~~~g~~iv-dv~~ 268 (361)
T 1pjc_A 236 GAVLVPGRRAPILVPASLVEQMRTGSVIV-DVAV 268 (361)
T ss_dssp ECCCCTTSSCCCCBCHHHHTTSCTTCEEE-ETTC
T ss_pred ECCCcCCCCCCeecCHHHHhhCCCCCEEE-EEec
Confidence 564221 1121 2 2445668888665 4433
No 330
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=92.97 E-value=0.16 Score=44.72 Aligned_cols=95 Identities=18% Similarity=0.079 Sum_probs=59.7
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCC--CCcc
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGEL--KGVD 115 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L--~~fD 115 (223)
..-++||-+|.+.|.+..++.+|.+ .+.+|+.++.++++.+.+++ . |.. +.....+..+.+.++ ..+|
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~---~Ga~Vi~~~~~~~~~~~~~~----l-Ga~~~~~~~~~~~~~~~~~~~~~g~D 237 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARA---FGAEVYATAGSTGKCEACER----L-GAKRGINYRSEDFAAVIKAETGQGVD 237 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHH---TTCEEEEEESSHHHHHHHHH----H-TCSEEEETTTSCHHHHHHHHHSSCEE
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHH---cCCEEEEEeCCHHHHHHHHh----c-CCCEEEeCCchHHHHHHHHHhCCCce
Confidence 3457899996555654455556543 36799999999998888765 4 544 333344555555443 3799
Q ss_pred EEEEeCCCcccHHHHH-HhccCCCceEEEEeC
Q 027409 116 FLVVDCTSKDFARVLR-FARFSNKGAVLAFKN 146 (223)
Q Consensus 116 fVFIDa~K~~Y~~~f~-~~~~l~~GgvIV~DN 146 (223)
+|| |+.-.. .++ .+..+++||.++.=.
T Consensus 238 vvi-d~~g~~---~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 238 IIL-DMIGAA---YFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp EEE-ESCCGG---GHHHHHHTEEEEEEEEECC
T ss_pred EEE-ECCCHH---HHHHHHHHhccCCEEEEEE
Confidence 776 554332 343 456667788877543
No 331
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=92.87 E-value=0.12 Score=44.68 Aligned_cols=93 Identities=13% Similarity=0.009 Sum_probs=57.7
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCC---CCcc
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGEL---KGVD 115 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L---~~fD 115 (223)
.-++||-+|.+.|.+..++.+|.+ .+.+|+.++.++++.+.+++ . |.. +.....+..+.+.++ ..+|
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~---~G~~V~~~~~~~~~~~~~~~----~-g~~~~~~~~~~~~~~~~~~~~~~~~~D 211 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKA---LGAKLIGTVGTAQKAQSALK----A-GAWQVINYREEDLVERLKEITGGKKVR 211 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHH---HTCEEEEEESSHHHHHHHHH----H-TCSEEEETTTSCHHHHHHHHTTTCCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH---cCCEEEEEeCCHHHHHHHHH----c-CCCEEEECCCccHHHHHHHHhCCCCce
Confidence 457899999665654355555543 36799999999988887765 3 443 332233444444332 2699
Q ss_pred EEEEeCCCcccHHHHH-HhccCCCceEEEEe
Q 027409 116 FLVVDCTSKDFARVLR-FARFSNKGAVLAFK 145 (223)
Q Consensus 116 fVFIDa~K~~Y~~~f~-~~~~l~~GgvIV~D 145 (223)
.||--+. ...++ .+..+++||.+|.=
T Consensus 212 ~vi~~~g----~~~~~~~~~~l~~~G~iv~~ 238 (327)
T 1qor_A 212 VVYDSVG----RDTWERSLDCLQRRGLMVSF 238 (327)
T ss_dssp EEEECSC----GGGHHHHHHTEEEEEEEEEC
T ss_pred EEEECCc----hHHHHHHHHHhcCCCEEEEE
Confidence 9875554 33454 44566788887753
No 332
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=92.81 E-value=0.92 Score=40.05 Aligned_cols=91 Identities=11% Similarity=0.064 Sum_probs=58.6
Q ss_pred CeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCCC--CccEEE
Q 027409 43 KLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGELK--GVDFLV 118 (223)
Q Consensus 43 k~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L~--~fDfVF 118 (223)
++||=+|.+.|.+..++.+|++. .+.+|+.++.++++.+.+++ . |.. +.. ..|..+.+.++. .+|.||
T Consensus 173 ~~VlV~Ga~G~vG~~a~qlak~~--~g~~Vi~~~~~~~~~~~~~~----l-Gad~vi~~-~~~~~~~v~~~~~~g~Dvvi 244 (363)
T 4dvj_A 173 PAILIVGGAGGVGSIAVQIARQR--TDLTVIATASRPETQEWVKS----L-GAHHVIDH-SKPLAAEVAALGLGAPAFVF 244 (363)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHH--CCSEEEEECSSHHHHHHHHH----T-TCSEEECT-TSCHHHHHHTTCSCCEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHh--cCCEEEEEeCCHHHHHHHHH----c-CCCEEEeC-CCCHHHHHHHhcCCCceEEE
Confidence 47999995546555666776542 25799999999998888764 4 655 222 234555566653 799775
Q ss_pred EeCCCcccHHHHH-HhccCCCceEEEE
Q 027409 119 VDCTSKDFARVLR-FARFSNKGAVLAF 144 (223)
Q Consensus 119 IDa~K~~Y~~~f~-~~~~l~~GgvIV~ 144 (223)
|+.- -...++ .+..+++||.+|.
T Consensus 245 -d~~g--~~~~~~~~~~~l~~~G~iv~ 268 (363)
T 4dvj_A 245 -STTH--TDKHAAEIADLIAPQGRFCL 268 (363)
T ss_dssp -ECSC--HHHHHHHHHHHSCTTCEEEE
T ss_pred -ECCC--chhhHHHHHHHhcCCCEEEE
Confidence 5532 223454 4466778888775
No 333
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=92.76 E-value=0.17 Score=43.80 Aligned_cols=91 Identities=15% Similarity=0.097 Sum_probs=57.4
Q ss_pred eEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecch--HHHhcCC--CCccEEEE
Q 027409 44 LIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQA--EEVMGEL--KGVDFLVV 119 (223)
Q Consensus 44 ~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA--~evL~~L--~~fDfVFI 119 (223)
+||=+|.+.|.+..++.+|.+. +.+++.++.++++.+.+++ . |.. .++.-+- .+.+..+ ..+|+||
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~---Ga~vi~~~~~~~~~~~~~~----l-Ga~-~v~~~~~~~~~~~~~~~~~~~d~vi- 222 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKR---GYDVVASTGNREAADYLKQ----L-GAS-EVISREDVYDGTLKALSKQQWQGAV- 222 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHH---TCCEEEEESSSSTHHHHHH----H-TCS-EEEEHHHHCSSCCCSSCCCCEEEEE-
T ss_pred eEEEECCCCHHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHH----c-CCc-EEEECCCchHHHHHHhhcCCccEEE-
Confidence 8999998667655666776553 5689999999998887764 4 554 1221111 1223333 2699875
Q ss_pred eCCCcccHHHHH-HhccCCCceEEEEeCC
Q 027409 120 DCTSKDFARVLR-FARFSNKGAVLAFKNA 147 (223)
Q Consensus 120 Da~K~~Y~~~f~-~~~~l~~GgvIV~DNv 147 (223)
|+.-. . .++ .++.+++||.++.=..
T Consensus 223 d~~g~--~-~~~~~~~~l~~~G~iv~~G~ 248 (330)
T 1tt7_A 223 DPVGG--K-QLASLLSKIQYGGSVAVSGL 248 (330)
T ss_dssp ESCCT--H-HHHHHHTTEEEEEEEEECCC
T ss_pred ECCcH--H-HHHHHHHhhcCCCEEEEEec
Confidence 66543 2 444 5577788998876443
No 334
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=92.74 E-value=0.65 Score=33.95 Aligned_cols=64 Identities=13% Similarity=0.046 Sum_probs=49.8
Q ss_pred CcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCCC--CccEEEEeCCCcc----cHHHHHHhc
Q 027409 69 CARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGELK--GVDFLVVDCTSKD----FARVLRFAR 134 (223)
Q Consensus 69 ~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L~--~fDfVFIDa~K~~----Y~~~f~~~~ 134 (223)
..+|.-+|.|+...+.-+..+++. |+.+. ...++.+.+..+. ++|+||+|..-.. -.++++.++
T Consensus 6 ~~~ilivdd~~~~~~~l~~~L~~~-g~~v~-~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~~~g~~~~~~l~ 75 (136)
T 3kto_A 6 HPIIYLVDHQKDARAALSKLLSPL-DVTIQ-CFASAESFMRQQISDDAIGMIIEAHLEDKKDSGIELLETLV 75 (136)
T ss_dssp -CEEEEECSCHHHHHHHHHHHTTS-SSEEE-EESSHHHHTTSCCCTTEEEEEEETTGGGBTTHHHHHHHHHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHHC-CcEEE-EeCCHHHHHHHHhccCCCEEEEeCcCCCCCccHHHHHHHHH
Confidence 358999999999999999999998 99855 6778888888773 7999999987544 234444444
No 335
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=92.63 E-value=0.88 Score=39.73 Aligned_cols=96 Identities=17% Similarity=0.080 Sum_probs=59.2
Q ss_pred hcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEe-cchHHHhcCC----
Q 027409 39 GWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIV-RQAEEVMGEL---- 111 (223)
Q Consensus 39 ~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~-GdA~evL~~L---- 111 (223)
...-++||-+|+ .|.+..++.+|.+. +.+|+.++.++++.+.+++ . |.. +.... .+..+.+.++
T Consensus 166 ~~~g~~VlV~Ga-G~vG~~a~qla~~~---Ga~Vi~~~~~~~~~~~~~~----l-Ga~~~~~~~~~~~~~~~i~~~~~~~ 236 (352)
T 1e3j_A 166 VQLGTTVLVIGA-GPIGLVSVLAAKAY---GAFVVCTARSPRRLEVAKN----C-GADVTLVVDPAKEEESSIIERIRSA 236 (352)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHT---TCEEEEEESCHHHHHHHHH----T-TCSEEEECCTTTSCHHHHHHHHHHH
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHc---CCEEEEEcCCHHHHHHHHH----h-CCCEEEcCcccccHHHHHHHHhccc
Confidence 345578999996 35544666666542 6789999999998887763 4 655 33331 3333333321
Q ss_pred --CCccEEEEeCCCcccHHHHH-HhccCCCceEEEEeC
Q 027409 112 --KGVDFLVVDCTSKDFARVLR-FARFSNKGAVLAFKN 146 (223)
Q Consensus 112 --~~fDfVFIDa~K~~Y~~~f~-~~~~l~~GgvIV~DN 146 (223)
..+|+|| |+.-. ...++ .++.+++||.+|.=.
T Consensus 237 ~g~g~D~vi-d~~g~--~~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 237 IGDLPNVTI-DCSGN--EKCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp SSSCCSEEE-ECSCC--HHHHHHHHHHSCTTCEEEECS
T ss_pred cCCCCCEEE-ECCCC--HHHHHHHHHHHhcCCEEEEEe
Confidence 3699986 55422 33444 456678888887643
No 336
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=92.61 E-value=0.21 Score=45.14 Aligned_cols=90 Identities=13% Similarity=0.078 Sum_probs=57.5
Q ss_pred CeEEEEcc------CcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCCCCccE
Q 027409 43 KLIVEAWT------HGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGELKGVDF 116 (223)
Q Consensus 43 k~ILEIGT------~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L~~fDf 116 (223)
.+||++|. +-| | |.+.-..+.+|.|+.+|++|-.. .+ + .++.||..++.. -.+||+
T Consensus 111 mrVLDLGA~s~kg~APG---S--~VLr~~~p~g~~VVavDL~~~~s--------da-~---~~IqGD~~~~~~-~~k~DL 172 (344)
T 3r24_A 111 MRVIHFGAGSDKGVAPG---T--AVLRQWLPTGTLLVDSDLNDFVS--------DA-D---STLIGDCATVHT-ANKWDL 172 (344)
T ss_dssp CEEEEESCCCTTSBCHH---H--HHHHHHSCTTCEEEEEESSCCBC--------SS-S---EEEESCGGGEEE-SSCEEE
T ss_pred CEEEeCCCCCCCCCCCc---H--HHHHHhCCCCcEEEEeeCccccc--------CC-C---eEEEcccccccc-CCCCCE
Confidence 58999995 655 4 22222245567999999987531 22 2 349999766333 258999
Q ss_pred EEEeCCCccc----------HHHHHH----h-ccCCCceEEEEeCCCCCC
Q 027409 117 LVVDCTSKDF----------ARVLRF----A-RFSNKGAVLAFKNAFQRS 151 (223)
Q Consensus 117 VFIDa~K~~Y----------~~~f~~----~-~~l~~GgvIV~DNvl~~g 151 (223)
|+-|.++.-- ..++++ + ..|++||-+++- +|.++
T Consensus 173 VISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVK-VFQGs 221 (344)
T 3r24_A 173 IISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVK-ITEHS 221 (344)
T ss_dssp EEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEE-ECSSS
T ss_pred EEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEE-EecCC
Confidence 9999654321 224443 3 457999999998 44443
No 337
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=92.53 E-value=0.33 Score=42.45 Aligned_cols=95 Identities=11% Similarity=0.061 Sum_probs=57.9
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEE-ecchHHHhcCC--CCcc
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVI-VRQAEEVMGEL--KGVD 115 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li-~GdA~evL~~L--~~fD 115 (223)
.-++||-+|++.|.+..++.+|.+ .+.+|+.+++++++.+.+++ . |.. +++. ..+..+.+.++ ..+|
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~---~Ga~V~~~~~~~~~~~~~~~----~-g~~~~~d~~~~~~~~~~~~~~~~~~~D 240 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKA---MGYRVLGIDGGEGKEELFRS----I-GGEVFIDFTKEKDIVGAVLKATDGGAH 240 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHH---TTCEEEEEECSTTHHHHHHH----T-TCCEEEETTTCSCHHHHHHHHHTSCEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHH---CCCcEEEEcCCHHHHHHHHH----c-CCceEEecCccHhHHHHHHHHhCCCCC
Confidence 347899999865543344455433 36799999999988776654 4 554 3322 23334444432 2699
Q ss_pred EEEEeCCCcccHHHHH-HhccCCCceEEEEeC
Q 027409 116 FLVVDCTSKDFARVLR-FARFSNKGAVLAFKN 146 (223)
Q Consensus 116 fVFIDa~K~~Y~~~f~-~~~~l~~GgvIV~DN 146 (223)
.||.-+. ....++ .++.+++||.||.=.
T Consensus 241 ~vi~~~g---~~~~~~~~~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 241 GVINVSV---SEAAIEASTRYVRANGTTVLVG 269 (347)
T ss_dssp EEEECSS---CHHHHHHHTTSEEEEEEEEECC
T ss_pred EEEECCC---cHHHHHHHHHHHhcCCEEEEEe
Confidence 8875443 234555 446668888887543
No 338
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=92.45 E-value=0.39 Score=43.49 Aligned_cols=92 Identities=11% Similarity=0.047 Sum_probs=64.5
Q ss_pred eEEEEccCcchHHHHHHHHHhcCCCCcE-EEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcC--------CCCc
Q 027409 44 LIVEAWTHGGPITTSIGLAIAARHTCAR-HVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGE--------LKGV 114 (223)
Q Consensus 44 ~ILEIGT~~Gys~Stl~la~A~~~~~g~-i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~--------L~~f 114 (223)
++|++=||+|- .++.+..| |.+ +..+|+|+...+..+.|+... .++.||..++..+ ...+
T Consensus 4 ~vidLFsG~GG--lslG~~~a----G~~~v~avE~d~~a~~t~~~N~~~~-----~~~~~DI~~~~~~~~~~~~~~~~~~ 72 (376)
T 3g7u_A 4 NVIDLFSGVGG--LSLGAARA----GFDVKMAVEIDQHAINTHAINFPRS-----LHVQEDVSLLNAEIIKGFFKNDMPI 72 (376)
T ss_dssp EEEEETCTTSH--HHHHHHHH----TCEEEEEECSCHHHHHHHHHHCTTS-----EEECCCGGGCCHHHHHHHHCSCCCC
T ss_pred eEEEEccCcCH--HHHHHHHC----CCcEEEEEeCCHHHHHHHHHhCCCC-----ceEecChhhcCHHHHHhhcccCCCe
Confidence 78999999885 66666554 344 679999999888888887655 6778888765321 1479
Q ss_pred cEEEEeCC----------------CcccHHHHHHhccCCCceEEEEeCC
Q 027409 115 DFLVVDCT----------------SKDFARVLRFARFSNKGAVLAFKNA 147 (223)
Q Consensus 115 DfVFIDa~----------------K~~Y~~~f~~~~~l~~GgvIV~DNv 147 (223)
|+|+.+.- ...+.+|++.+..++|- ++|..||
T Consensus 73 D~i~ggpPCQ~fS~ag~~~~~d~r~~L~~~~~~~v~~~~P~-~~v~ENV 120 (376)
T 3g7u_A 73 DGIIGGPPCQGFSSIGKGNPDDSRNQLYMHFYRLVSELQPL-FFLAENV 120 (376)
T ss_dssp CEEEECCCCCTTC-------CHHHHHHHHHHHHHHHHHCCS-EEEEEEC
T ss_pred eEEEecCCCCCcccccCCCCCCchHHHHHHHHHHHHHhCCC-EEEEecc
Confidence 99999853 12455666666555664 6677776
No 339
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=92.40 E-value=0.4 Score=41.90 Aligned_cols=93 Identities=15% Similarity=0.075 Sum_probs=58.1
Q ss_pred CeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCC---CCccEE
Q 027409 43 KLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGEL---KGVDFL 117 (223)
Q Consensus 43 k~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L---~~fDfV 117 (223)
+.||=.|-+.|.+..++.+|.+. +.+|+.++.++++.+.+++ . |.. +.....|..+.+.++ ..+|+|
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~---Ga~Vi~~~~~~~~~~~~~~----~-Ga~~~~~~~~~~~~~~v~~~~~~~g~D~v 237 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEE---GFRPIVTVRRDEQIALLKD----I-GAAHVLNEKAPDFEATLREVMKAEQPRIF 237 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHH---TCEEEEEESCGGGHHHHHH----H-TCSEEEETTSTTHHHHHHHHHHHHCCCEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHH----c-CCCEEEECCcHHHHHHHHHHhcCCCCcEE
Confidence 56665544445544555666543 6799999999999888864 4 554 443344555555554 269987
Q ss_pred EEeCCCcccHHHHHHhccCCCceEEEEeC
Q 027409 118 VVDCTSKDFARVLRFARFSNKGAVLAFKN 146 (223)
Q Consensus 118 FIDa~K~~Y~~~f~~~~~l~~GgvIV~DN 146 (223)
| |+.-... .-..+..+++||.+|.=.
T Consensus 238 i-d~~g~~~--~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 238 L-DAVTGPL--ASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp E-ESSCHHH--HHHHHHHSCTTCEEEECC
T ss_pred E-ECCCChh--HHHHHhhhcCCCEEEEEe
Confidence 5 6553322 223556778888887643
No 340
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=92.37 E-value=0.88 Score=40.25 Aligned_cols=95 Identities=6% Similarity=-0.007 Sum_probs=59.9
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCC--CCcc
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGEL--KGVD 115 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L--~~fD 115 (223)
..-++||=+|.+.|.+..++.+|.+. +.+++.+- ++++.+.|++ . |.. +.....|..+.+.++ +.+|
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~---Ga~Vi~~~-~~~~~~~~~~----l-Ga~~vi~~~~~~~~~~v~~~t~g~~d 233 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLS---GYIPIATC-SPHNFDLAKS----R-GAEEVFDYRAPNLAQTIRTYTKNNLR 233 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHT---TCEEEEEE-CGGGHHHHHH----T-TCSEEEETTSTTHHHHHHHHTTTCCC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHC---CCEEEEEe-CHHHHHHHHH----c-CCcEEEECCCchHHHHHHHHccCCcc
Confidence 34578999998656555677777653 56887774 7887776653 4 665 444455666666554 3699
Q ss_pred EEEEeCCCcccHHHHH-HhccC-CCceEEEEeC
Q 027409 116 FLVVDCTSKDFARVLR-FARFS-NKGAVLAFKN 146 (223)
Q Consensus 116 fVFIDa~K~~Y~~~f~-~~~~l-~~GgvIV~DN 146 (223)
+|| |+--. ...++ .+..+ ++||.+|.=.
T Consensus 234 ~v~-d~~g~--~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 234 YAL-DCITN--VESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp EEE-ESSCS--HHHHHHHHHHSCTTCEEEEESS
T ss_pred EEE-ECCCc--hHHHHHHHHHhhcCCCEEEEEe
Confidence 986 55422 23444 34556 6888887644
No 341
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=92.26 E-value=0.11 Score=45.86 Aligned_cols=48 Identities=2% Similarity=0.180 Sum_probs=34.4
Q ss_pred EEEEecchHHHhcCCC--CccEEEEeCC--Cc-----------cc----HHHHHHh-ccCCCceEEEE
Q 027409 97 SEVIVRQAEEVMGELK--GVDFLVVDCT--SK-----------DF----ARVLRFA-RFSNKGAVLAF 144 (223)
Q Consensus 97 I~li~GdA~evL~~L~--~fDfVFIDa~--K~-----------~Y----~~~f~~~-~~l~~GgvIV~ 144 (223)
.+++.||+++.|+.+. .||+||+|-- .. .| .+.+..+ ++|++||.|++
T Consensus 15 ~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i 82 (323)
T 1boo_A 15 GSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVV 82 (323)
T ss_dssp EEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEE
Confidence 8999999999998873 7999999942 11 12 2333333 56789998776
No 342
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=92.17 E-value=0.66 Score=40.67 Aligned_cols=98 Identities=14% Similarity=-0.038 Sum_probs=62.4
Q ss_pred HhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcE-EEEEeCCchHHHHHHHHHHhhcCceEEEEe-----cchHHHhcCC
Q 027409 38 AGWNAKLIVEAWTHGGPITTSIGLAIAARHTCAR-HVCIVPDERSRLAYVKAMYDVVGWVSEVIV-----RQAEEVMGEL 111 (223)
Q Consensus 38 ~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~-i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~-----GdA~evL~~L 111 (223)
+...-++||=+|+ .|.+..++.+|++. +.+ |+.++.++++.+.|++. ... -+.... .|..+.+.++
T Consensus 176 ~~~~g~~VlV~Ga-G~vG~~aiqlak~~---Ga~~Vi~~~~~~~~~~~a~~l-~~~---~~~~~~~~~~~~~~~~~v~~~ 247 (363)
T 3m6i_A 176 GVRLGDPVLICGA-GPIGLITMLCAKAA---GACPLVITDIDEGRLKFAKEI-CPE---VVTHKVERLSAEESAKKIVES 247 (363)
T ss_dssp TCCTTCCEEEECC-SHHHHHHHHHHHHT---TCCSEEEEESCHHHHHHHHHH-CTT---CEEEECCSCCHHHHHHHHHHH
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHc---CCCEEEEECCCHHHHHHHHHh-chh---cccccccccchHHHHHHHHHH
Confidence 3445578999997 46655677777653 555 99999999999999987 422 133331 3334444433
Q ss_pred ---CCccEEEEeCCCcccHHHHH-HhccCCCceEEEEeC
Q 027409 112 ---KGVDFLVVDCTSKDFARVLR-FARFSNKGAVLAFKN 146 (223)
Q Consensus 112 ---~~fDfVFIDa~K~~Y~~~f~-~~~~l~~GgvIV~DN 146 (223)
..+|+|| |+.- -...++ .++.+++||.++.=-
T Consensus 248 t~g~g~Dvvi-d~~g--~~~~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 248 FGGIEPAVAL-ECTG--VESSIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp TSSCCCSEEE-ECSC--CHHHHHHHHHHSCTTCEEEECC
T ss_pred hCCCCCCEEE-ECCC--ChHHHHHHHHHhcCCCEEEEEc
Confidence 2699887 5432 223444 456778889888643
No 343
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=92.05 E-value=0.56 Score=41.35 Aligned_cols=95 Identities=17% Similarity=0.105 Sum_probs=59.6
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCc-EEEEEeCCchHHHHHHHHHHhhcCce--EEEEe--cchHHHhcCC--CC
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCA-RHVCIVPDERSRLAYVKAMYDVVGWV--SEVIV--RQAEEVMGEL--KG 113 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g-~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~--GdA~evL~~L--~~ 113 (223)
.-++||-+|+ .|.+..++.+|++. +. +|+.++.++++.+.|++ . |.. +.... .+..+.+.++ +.
T Consensus 192 ~g~~VlV~Ga-G~vG~~a~qla~~~---Ga~~Vi~~~~~~~~~~~~~~----l-Ga~~vi~~~~~~~~~~~~~~~~~~~g 262 (374)
T 1cdo_A 192 PGSTCAVFGL-GAVGLAAVMGCHSA---GAKRIIAVDLNPDKFEKAKV----F-GATDFVNPNDHSEPISQVLSKMTNGG 262 (374)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHT---TCSEEEEECSCGGGHHHHHH----T-TCCEEECGGGCSSCHHHHHHHHHTSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHc---CCCEEEEEcCCHHHHHHHHH----h-CCceEEeccccchhHHHHHHHHhCCC
Confidence 3468999996 46545666776542 55 89999999999888764 4 654 22211 2344444433 37
Q ss_pred ccEEEEeCCCcccHHHHH-HhccCCCc-eEEEEeCC
Q 027409 114 VDFLVVDCTSKDFARVLR-FARFSNKG-AVLAFKNA 147 (223)
Q Consensus 114 fDfVFIDa~K~~Y~~~f~-~~~~l~~G-gvIV~DNv 147 (223)
+|+|| |+.- ....++ .++.+++| |.+|.=..
T Consensus 263 ~D~vi-d~~g--~~~~~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 263 VDFSL-ECVG--NVGVMRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp BSEEE-ECSC--CHHHHHHHHHTBCTTTCEEEECSC
T ss_pred CCEEE-ECCC--CHHHHHHHHHHhhcCCcEEEEEcC
Confidence 99886 5542 234454 45777888 88876443
No 344
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=91.98 E-value=0.35 Score=42.19 Aligned_cols=92 Identities=15% Similarity=0.081 Sum_probs=57.3
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCC---CCcc
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGEL---KGVD 115 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L---~~fD 115 (223)
.-++||-+|.+.|.+..++.+|.+ .+.+|+.++.++++.+.+++ . |.. ++....+..+.+.++ ..+|
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~---~G~~Vi~~~~~~~~~~~~~~----~-ga~~~~d~~~~~~~~~~~~~~~~~~~d 237 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKL---FGARVIATAGSEDKLRRAKA----L-GADETVNYTHPDWPKEVRRLTGGKGAD 237 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHH---TTCEEEEEESSHHHHHHHHH----H-TCSEEEETTSTTHHHHHHHHTTTTCEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHh----c-CCCEEEcCCcccHHHHHHHHhCCCCce
Confidence 447899999865654455566543 36799999999998888764 4 544 333233444444432 2699
Q ss_pred EEEEeCCCcccHHHHH-HhccCCCceEEEE
Q 027409 116 FLVVDCTSKDFARVLR-FARFSNKGAVLAF 144 (223)
Q Consensus 116 fVFIDa~K~~Y~~~f~-~~~~l~~GgvIV~ 144 (223)
.||--+. .. .++ .+..+++||.+|.
T Consensus 238 ~vi~~~g-~~---~~~~~~~~l~~~G~~v~ 263 (343)
T 2eih_A 238 KVVDHTG-AL---YFEGVIKATANGGRIAI 263 (343)
T ss_dssp EEEESSC-SS---SHHHHHHHEEEEEEEEE
T ss_pred EEEECCC-HH---HHHHHHHhhccCCEEEE
Confidence 9875555 32 333 3455577887775
No 345
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=91.89 E-value=0.054 Score=47.90 Aligned_cols=116 Identities=15% Similarity=0.130 Sum_probs=64.0
Q ss_pred CCcHHHHHHHHHHHHh--cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEE
Q 027409 24 IKESGVAELLSAMAAG--WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVI 100 (223)
Q Consensus 24 ii~p~~g~fL~~L~~~--~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li 100 (223)
-.+...-.++.+.-+. ....+||++|||.|- .+-..+ ....-+.++.+++..+....++. .... |.. +.+
T Consensus 55 YrSRaA~KL~ei~ek~~l~~~~~VLDLGaAPGG--WSQvAa--~~~~~~~v~g~dVGvDl~~~pi~-~~~~-g~~ii~~- 127 (277)
T 3evf_A 55 AVSRGTAKLRWFHERGYVKLEGRVIDLGCGRGG--WCYYAA--AQKEVSGVKGFTLGRDGHEKPMN-VQSL-GWNIITF- 127 (277)
T ss_dssp CSSTHHHHHHHHHHTTSSCCCEEEEEETCTTCH--HHHHHH--TSTTEEEEEEECCCCTTCCCCCC-CCBT-TGGGEEE-
T ss_pred ccccHHHHHHHHHHhCCCCCCCEEEEecCCCCH--HHHHHH--HhcCCCcceeEEEeccCcccccc-cCcC-CCCeEEE-
Confidence 4566677777766662 245689999999993 332221 12222456666665332110111 1222 445 444
Q ss_pred ecchHHHhcCC--CCccEEEEeCCCc-------ccH--HHHHHh-ccCCCc-eEEEEeCCCC
Q 027409 101 VRQAEEVMGEL--KGVDFLVVDCTSK-------DFA--RVLRFA-RFSNKG-AVLAFKNAFQ 149 (223)
Q Consensus 101 ~GdA~evL~~L--~~fDfVFIDa~K~-------~Y~--~~f~~~-~~l~~G-gvIV~DNvl~ 149 (223)
.+++ ++. .+ .+||+|+.|.... ++. .+++.+ +.|+|| |..|+ -+|.
T Consensus 128 ~~~~-dv~-~l~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~-KVf~ 186 (277)
T 3evf_A 128 KDKT-DIH-RLEPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCV-KVLA 186 (277)
T ss_dssp ECSC-CTT-TSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEE-EESC
T ss_pred eccc-eeh-hcCCCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEE-EecC
Confidence 4554 322 23 3799999998554 211 223333 567999 99999 5666
No 346
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=91.85 E-value=0.41 Score=41.91 Aligned_cols=91 Identities=18% Similarity=0.141 Sum_probs=57.2
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEecchHHHhcCC---CCcc
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVRQAEEVMGEL---KGVD 115 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~GdA~evL~~L---~~fD 115 (223)
..-++||-+|.+.|.+..++.+|.+ .+.+|+.+ .++++.+.+++ . |.. |. ...+..+.+.++ ..+|
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~---~Ga~Vi~~-~~~~~~~~~~~----l-Ga~~i~-~~~~~~~~~~~~~~~~g~D 218 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALA---RGARVFAT-ARGSDLEYVRD----L-GATPID-ASREPEDYAAEHTAGQGFD 218 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHH---TTCEEEEE-ECHHHHHHHHH----H-TSEEEE-TTSCHHHHHHHHHTTSCEE
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHH---CCCEEEEE-eCHHHHHHHHH----c-CCCEec-cCCCHHHHHHHHhcCCCce
Confidence 3457899999655654466666654 36789988 88887766654 4 655 44 334445555443 2699
Q ss_pred EEEEeCCCcccHHHHH-HhccCCCceEEEE
Q 027409 116 FLVVDCTSKDFARVLR-FARFSNKGAVLAF 144 (223)
Q Consensus 116 fVFIDa~K~~Y~~~f~-~~~~l~~GgvIV~ 144 (223)
.|| |+.-. +.++ .+..+++||.+|.
T Consensus 219 ~vi-d~~g~---~~~~~~~~~l~~~G~iv~ 244 (343)
T 3gaz_A 219 LVY-DTLGG---PVLDASFSAVKRFGHVVS 244 (343)
T ss_dssp EEE-ESSCT---HHHHHHHHHEEEEEEEEE
T ss_pred EEE-ECCCc---HHHHHHHHHHhcCCeEEE
Confidence 775 55433 3444 4566777888775
No 347
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=91.85 E-value=0.78 Score=32.94 Aligned_cols=65 Identities=11% Similarity=0.100 Sum_probs=47.3
Q ss_pred CcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCccEEEEeCCCc--ccHHHHHHhcc
Q 027409 69 CARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVDFLVVDCTSK--DFARVLRFARF 135 (223)
Q Consensus 69 ~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fDfVFIDa~K~--~Y~~~f~~~~~ 135 (223)
+.+|.-+|.|+...+.-++.+++. |+.+. ...++.+.+..+ .++|+|++|..-. .-.++++.++.
T Consensus 7 ~~~ilivdd~~~~~~~l~~~L~~~-g~~v~-~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~ 75 (130)
T 3eod_A 7 GKQILIVEDEQVFRSLLDSWFSSL-GATTV-LAADGVDALELLGGFTPDLMICDIAMPRMNGLKLLEHIRN 75 (130)
T ss_dssp TCEEEEECSCHHHHHHHHHHHHHT-TCEEE-EESCHHHHHHHHTTCCCSEEEECCC-----CHHHHHHHHH
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhC-CceEE-EeCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHh
Confidence 468999999999999999999998 99844 356776666654 3799999998633 33455555543
No 348
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=91.83 E-value=0.15 Score=45.18 Aligned_cols=49 Identities=16% Similarity=0.206 Sum_probs=35.7
Q ss_pred EEEE-ecchHHHhcCCC--CccEEEEeCC----------CcccHHHH----HH-hccCCCceEEEEe
Q 027409 97 SEVI-VRQAEEVMGELK--GVDFLVVDCT----------SKDFARVL----RF-ARFSNKGAVLAFK 145 (223)
Q Consensus 97 I~li-~GdA~evL~~L~--~fDfVFIDa~----------K~~Y~~~f----~~-~~~l~~GgvIV~D 145 (223)
.+++ .||+++.|+.|. .||+||+|-- .+.|..++ .. .++|++||+|++-
T Consensus 39 ~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~ 105 (319)
T 1eg2_A 39 RHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIF 105 (319)
T ss_dssp EEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 7888 999999999884 7999999962 13354333 32 2567899988764
No 349
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=91.67 E-value=0.26 Score=43.87 Aligned_cols=93 Identities=15% Similarity=0.145 Sum_probs=57.4
Q ss_pred CCeEEEEccCcchHHHHHHHHHhcCCCC-cEEEEEeCCchHHHHHHHHHHhhcCce--EEEE---ecchHHHhcCC--C-
Q 027409 42 AKLIVEAWTHGGPITTSIGLAIAARHTC-ARHVCIVPDERSRLAYVKAMYDVVGWV--SEVI---VRQAEEVMGEL--K- 112 (223)
Q Consensus 42 ak~ILEIGT~~Gys~Stl~la~A~~~~~-g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li---~GdA~evL~~L--~- 112 (223)
-++||-+| +.|.+..++.+|.+. + .+|+.++.++++.+.+++ . |.. +... ..|..+.+.++ +
T Consensus 196 g~~VlV~G-aG~vG~~aiqlak~~---Ga~~Vi~~~~~~~~~~~~~~----l-Ga~~vi~~~~~~~~~~~~~v~~~~~g~ 266 (380)
T 1vj0_A 196 GKTVVIQG-AGPLGLFGVVIARSL---GAENVIVIAGSPNRLKLAEE----I-GADLTLNRRETSVEERRKAIMDITHGR 266 (380)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHT---TBSEEEEEESCHHHHHHHHH----T-TCSEEEETTTSCHHHHHHHHHHHTTTS
T ss_pred CCEEEEEC-cCHHHHHHHHHHHHc---CCceEEEEcCCHHHHHHHHH----c-CCcEEEeccccCcchHHHHHHHHhCCC
Confidence 36899999 556655666776542 5 499999999998887763 4 654 2222 22333444433 2
Q ss_pred CccEEEEeCCCcccHHHHH-HhccCCCceEEEEeC
Q 027409 113 GVDFLVVDCTSKDFARVLR-FARFSNKGAVLAFKN 146 (223)
Q Consensus 113 ~fDfVFIDa~K~~Y~~~f~-~~~~l~~GgvIV~DN 146 (223)
.+|+|| |+.- ....++ .++.+++||.+|.=.
T Consensus 267 g~Dvvi-d~~g--~~~~~~~~~~~l~~~G~iv~~G 298 (380)
T 1vj0_A 267 GADFIL-EATG--DSRALLEGSELLRRGGFYSVAG 298 (380)
T ss_dssp CEEEEE-ECSS--CTTHHHHHHHHEEEEEEEEECC
T ss_pred CCcEEE-ECCC--CHHHHHHHHHHHhcCCEEEEEe
Confidence 699986 5542 122343 445567888887543
No 350
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=91.65 E-value=0.91 Score=38.37 Aligned_cols=80 Identities=13% Similarity=0.064 Sum_probs=57.2
Q ss_pred hcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHH------Hhc---
Q 027409 39 GWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEE------VMG--- 109 (223)
Q Consensus 39 ~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~e------vL~--- 109 (223)
+...|.+|=.|.+.| ++.+++...+. .+.+|+.++++++..+.+.+.++.. |..+.++..|..+ .+.
T Consensus 21 m~~~k~~lVTGas~G-IG~aia~~la~--~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~ 96 (279)
T 3sju_A 21 MSRPQTAFVTGVSSG-IGLAVARTLAA--RGIAVYGCARDAKNVSAAVDGLRAA-GHDVDGSSCDVTSTDEVHAAVAAAV 96 (279)
T ss_dssp ----CEEEEESTTSH-HHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHTT-TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCH-HHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEECCCCCHHHHHHHHHHHH
Confidence 346789999999877 45666555443 4789999999999999988888887 7778888888632 122
Q ss_pred -CCCCccEEEEeCC
Q 027409 110 -ELKGVDFLVVDCT 122 (223)
Q Consensus 110 -~L~~fDfVFIDa~ 122 (223)
++++.|.++.-|.
T Consensus 97 ~~~g~id~lv~nAg 110 (279)
T 3sju_A 97 ERFGPIGILVNSAG 110 (279)
T ss_dssp HHHCSCCEEEECCC
T ss_pred HHcCCCcEEEECCC
Confidence 2247999998775
No 351
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=91.59 E-value=1.2 Score=31.93 Aligned_cols=65 Identities=17% Similarity=0.141 Sum_probs=48.8
Q ss_pred CcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCccEEEEeCCCcc--cHHHHHHhcc
Q 027409 69 CARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVDFLVVDCTSKD--FARVLRFARF 135 (223)
Q Consensus 69 ~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fDfVFIDa~K~~--Y~~~f~~~~~ 135 (223)
.-+|.-+|.|+...+.-+..+++. |+.+. ...++.+.+..+ .++|+|++|..-.. -.++++.++.
T Consensus 6 ~~~ilivdd~~~~~~~l~~~L~~~-g~~v~-~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~ 74 (132)
T 3lte_A 6 SKRILVVDDDQAMAAAIERVLKRD-HWQVE-IAHNGFDAGIKLSTFEPAIMTLDLSMPKLDGLDVIRSLRQ 74 (132)
T ss_dssp -CEEEEECSCHHHHHHHHHHHHHT-TCEEE-EESSHHHHHHHHHHTCCSEEEEESCBTTBCHHHHHHHHHT
T ss_pred CccEEEEECCHHHHHHHHHHHHHC-CcEEE-EeCCHHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHh
Confidence 458999999999999999999998 99854 566777766655 47999999986433 3455555543
No 352
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=91.54 E-value=0.7 Score=33.75 Aligned_cols=51 Identities=18% Similarity=0.212 Sum_probs=41.4
Q ss_pred CcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCccEEEEeC
Q 027409 69 CARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVDFLVVDC 121 (223)
Q Consensus 69 ~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fDfVFIDa 121 (223)
.-+|.-+|.|+...+.-+..+++. |+.+. ...++.+.+..+ ..+|+||+|.
T Consensus 4 ~~~iLivdd~~~~~~~l~~~L~~~-g~~v~-~~~~~~~a~~~l~~~~~dlvi~d~ 56 (142)
T 2qxy_A 4 TPTVMVVDESRITFLAVKNALEKD-GFNVI-WAKNEQEAFTFLRREKIDLVFVDV 56 (142)
T ss_dssp CCEEEEECSCHHHHHHHHHHHGGG-TCEEE-EESSHHHHHHHHTTSCCSEEEEEC
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhC-CCEEE-EECCHHHHHHHHhccCCCEEEEeC
Confidence 358999999999999999999998 99855 556666665544 3799999998
No 353
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=91.41 E-value=0.78 Score=34.23 Aligned_cols=65 Identities=11% Similarity=0.102 Sum_probs=48.9
Q ss_pred CCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCccEEEEeCCCcc--cHHHHHHhc
Q 027409 68 TCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVDFLVVDCTSKD--FARVLRFAR 134 (223)
Q Consensus 68 ~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fDfVFIDa~K~~--Y~~~f~~~~ 134 (223)
...+|.-+|.|+...+.-+..+++. |+.|. ...++.+.+..+ ..||+||+|..-.. -.++++.++
T Consensus 13 ~~~~ILivdd~~~~~~~l~~~L~~~-g~~v~-~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~ 81 (153)
T 3hv2_A 13 RRPEILLVDSQEVILQRLQQLLSPL-PYTLH-FARDATQALQLLASREVDLVISAAHLPQMDGPTLLARIH 81 (153)
T ss_dssp SCCEEEEECSCHHHHHHHHHHHTTS-SCEEE-EESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHhccc-CcEEE-EECCHHHHHHHHHcCCCCEEEEeCCCCcCcHHHHHHHHH
Confidence 3468999999999999999999998 98754 556777666655 37999999986433 345555554
No 354
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=91.40 E-value=0.33 Score=41.74 Aligned_cols=87 Identities=7% Similarity=-0.085 Sum_probs=53.9
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCCCCccEEEEe
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGELKGVDFLVVD 120 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L~~fDfVFID 120 (223)
.-++||=+|. .|.+..++.+|++. +.+|+.++ ++++.+.+++ . |.. .++. | .+.+ -..+|+|| |
T Consensus 142 ~g~~VlV~Ga-G~vG~~a~qlak~~---Ga~Vi~~~-~~~~~~~~~~----l-Ga~-~v~~-d-~~~v--~~g~Dvv~-d 205 (315)
T 3goh_A 142 KQREVLIVGF-GAVNNLLTQMLNNA---GYVVDLVS-ASLSQALAAK----R-GVR-HLYR-E-PSQV--TQKYFAIF-D 205 (315)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHH---TCEEEEEC-SSCCHHHHHH----H-TEE-EEES-S-GGGC--CSCEEEEE-C
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHc---CCEEEEEE-ChhhHHHHHH----c-CCC-EEEc-C-HHHh--CCCccEEE-E
Confidence 4578999999 56655777777653 67999999 8888888765 4 665 2222 5 3333 14799876 6
Q ss_pred CCCcccHHHHHHhccCCCceEEEEe
Q 027409 121 CTSKDFARVLRFARFSNKGAVLAFK 145 (223)
Q Consensus 121 a~K~~Y~~~f~~~~~l~~GgvIV~D 145 (223)
+.-... .-..+..+++||.+|.=
T Consensus 206 ~~g~~~--~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 206 AVNSQN--AAALVPSLKANGHIICI 228 (315)
T ss_dssp C---------TTGGGEEEEEEEEEE
T ss_pred CCCchh--HHHHHHHhcCCCEEEEE
Confidence 644332 22345667888877653
No 355
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=91.32 E-value=0.23 Score=38.48 Aligned_cols=71 Identities=15% Similarity=0.146 Sum_probs=50.8
Q ss_pred HhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCccEEEEeCCCccc--HHHHHHhc
Q 027409 63 IAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVDFLVVDCTSKDF--ARVLRFAR 134 (223)
Q Consensus 63 ~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fDfVFIDa~K~~Y--~~~f~~~~ 134 (223)
.+.+..+-||.-+|-|+...+..+..+++. |+.+.....|+.+.+..+ .+||+|++|-.=..- .++.+.++
T Consensus 6 e~~m~k~~rILiVDD~~~~r~~l~~~L~~~-G~~~v~~a~~g~~al~~~~~~~~DlillD~~MP~mdG~el~~~ir 80 (134)
T 3to5_A 6 EAILNKNMKILIVDDFSTMRRIVKNLLRDL-GFNNTQEADDGLTALPMLKKGDFDFVVTDWNMPGMQGIDLLKNIR 80 (134)
T ss_dssp ---CCTTCCEEEECSCHHHHHHHHHHHHHT-TCCCEEEESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHH
T ss_pred HHHhCCCCEEEEEeCCHHHHHHHHHHHHHc-CCcEEEEECCHHHHHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHH
Confidence 445655678999999999999999999999 997333456777766655 379999999863332 44555554
No 356
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=91.22 E-value=0.25 Score=43.48 Aligned_cols=92 Identities=11% Similarity=0.023 Sum_probs=55.4
Q ss_pred CeEEEEccCcchHHHH-HHHH-HhcCCCCcE-EEEEeCCch---HHHHHHHHHHhhcCce-EEEEecchHHHhcCC-CCc
Q 027409 43 KLIVEAWTHGGPITTS-IGLA-IAARHTCAR-HVCIVPDER---SRLAYVKAMYDVVGWV-SEVIVRQAEEVMGEL-KGV 114 (223)
Q Consensus 43 k~ILEIGT~~Gys~St-l~la-~A~~~~~g~-i~TIE~d~e---~~~~Ar~~~~~a~G~~-I~li~GdA~evL~~L-~~f 114 (223)
++||=+|. .|.+..+ +.+| ++ .+.+ |+.++.+++ +.+.+++ . |.. +.....|..+ +.++ +.+
T Consensus 174 ~~VlV~Ga-G~vG~~a~iqla~k~---~Ga~~Vi~~~~~~~~~~~~~~~~~----l-Ga~~v~~~~~~~~~-i~~~~gg~ 243 (357)
T 2b5w_A 174 SSAFVLGN-GSLGLLTLAMLKVDD---KGYENLYCLGRRDRPDPTIDIIEE----L-DATYVDSRQTPVED-VPDVYEQM 243 (357)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHCT---TCCCEEEEEECCCSSCHHHHHHHH----T-TCEEEETTTSCGGG-HHHHSCCE
T ss_pred CEEEEECC-CHHHHHHHHHHHHHH---cCCcEEEEEeCCcccHHHHHHHHH----c-CCcccCCCccCHHH-HHHhCCCC
Confidence 89999997 4554445 5554 33 3565 999999998 8777753 4 665 4111223333 3322 269
Q ss_pred cEEEEeCCCcccHHHHH-HhccCCCceEEEEeCC
Q 027409 115 DFLVVDCTSKDFARVLR-FARFSNKGAVLAFKNA 147 (223)
Q Consensus 115 DfVFIDa~K~~Y~~~f~-~~~~l~~GgvIV~DNv 147 (223)
|+|| |+.-. ...++ .++.+++||.+|.=..
T Consensus 244 Dvvi-d~~g~--~~~~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 244 DFIY-EATGF--PKHAIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp EEEE-ECSCC--HHHHHHHHHHEEEEEEEEECCC
T ss_pred CEEE-ECCCC--hHHHHHHHHHHhcCCEEEEEeC
Confidence 9986 66432 23444 4566688888876433
No 357
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=91.18 E-value=1.3 Score=32.00 Aligned_cols=65 Identities=17% Similarity=0.100 Sum_probs=47.4
Q ss_pred CcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC---CCccEEEEeCCCc--ccHHHHHHhcc
Q 027409 69 CARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL---KGVDFLVVDCTSK--DFARVLRFARF 135 (223)
Q Consensus 69 ~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L---~~fDfVFIDa~K~--~Y~~~f~~~~~ 135 (223)
.-+|.-+|.|+...+.-++.+++. |+.+.. ..++.+.+..+ .++|+||+|..-. .-.++++.++.
T Consensus 7 ~~~ilivdd~~~~~~~l~~~L~~~-g~~v~~-~~~~~~a~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~ 76 (136)
T 3hdv_A 7 RPLVLVVDDNAVNREALILYLKSR-GIDAVG-ADGAEEARLYLHYQKRIGLMITDLRMQPESGLDLIRTIRA 76 (136)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHT-TCCEEE-ESSHHHHHHHHHHCTTEEEEEECSCCSSSCHHHHHHHHHT
T ss_pred CCeEEEECCCHHHHHHHHHHHHHc-CceEEE-eCCHHHHHHHHHhCCCCcEEEEeccCCCCCHHHHHHHHHh
Confidence 468999999999999999999998 998443 45555555444 3499999998633 33555665543
No 358
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=91.18 E-value=0.57 Score=33.78 Aligned_cols=65 Identities=11% Similarity=0.035 Sum_probs=46.2
Q ss_pred EEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCccEEEEeCCCc--ccHHHHHHhccC
Q 027409 71 RHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVDFLVVDCTSK--DFARVLRFARFS 136 (223)
Q Consensus 71 ~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fDfVFIDa~K~--~Y~~~f~~~~~l 136 (223)
+|.-+|.|+...+.-+..+++. |+.+.....++.+.+..+ ..+|+|++|..-. +-.++++.++..
T Consensus 3 ~ilivdd~~~~~~~l~~~L~~~-g~~v~~~~~~~~~a~~~~~~~~~dlii~d~~l~~~~g~~~~~~l~~~ 71 (134)
T 3f6c_A 3 NAIIIDDHPLAIAAIRNLLIKN-DIEILAELTEGGSAVQRVETLKPDIVIIDVDIPGVNGIQVLETLRKR 71 (134)
T ss_dssp EEEEECCCHHHHHHHHHHHHHT-TEEEEEEESSSTTHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHT
T ss_pred EEEEEcCCHHHHHHHHHHHhhC-CcEEEEEcCCHHHHHHHHHhcCCCEEEEecCCCCCChHHHHHHHHhc
Confidence 6888999999999999999998 977543445555544444 3799999998643 335556655433
No 359
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=91.18 E-value=0.86 Score=40.10 Aligned_cols=78 Identities=14% Similarity=0.098 Sum_probs=47.4
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhh--cCceEEEEecchHHHhcCCCCccEEE
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDV--VGWVSEVIVRQAEEVMGELKGVDFLV 118 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a--~G~~I~li~GdA~evL~~L~~fDfVF 118 (223)
++.+|.=||+ |+.++++++..+....-+.|+-+|+|+++++.-..-+.+. +...+++..+| .+ .+..-|+|+
T Consensus 6 ~~~KI~IiGa--G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~-~~---a~~~aDvVi 79 (318)
T 1y6j_A 6 SRSKVAIIGA--GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD-YS---DVKDCDVIV 79 (318)
T ss_dssp -CCCEEEECC--SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C-GG---GGTTCSEEE
T ss_pred CCCEEEEECC--CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECC-HH---HhCCCCEEE
Confidence 4678999997 7778888777666544468999999988766423334443 12126666554 22 345799999
Q ss_pred EeCCCc
Q 027409 119 VDCTSK 124 (223)
Q Consensus 119 IDa~K~ 124 (223)
+=+...
T Consensus 80 i~~g~p 85 (318)
T 1y6j_A 80 VTAGAN 85 (318)
T ss_dssp ECCCC-
T ss_pred EcCCCC
Confidence 987543
No 360
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=91.07 E-value=0.72 Score=40.67 Aligned_cols=94 Identities=18% Similarity=0.120 Sum_probs=58.6
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCc-EEEEEeCCchHHHHHHHHHHhhcCce--EEEEe--cchHHHhcCC--CC
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCA-RHVCIVPDERSRLAYVKAMYDVVGWV--SEVIV--RQAEEVMGEL--KG 113 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g-~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~--GdA~evL~~L--~~ 113 (223)
.-++||-+|+ .|.+..++.+|.+. +. +|+.++.++++.+.|++ . |.. ++... .+..+.+.++ +.
T Consensus 191 ~g~~VlV~Ga-G~vG~~a~qla~~~---Ga~~Vi~~~~~~~~~~~~~~----l-Ga~~vi~~~~~~~~~~~~~~~~~~~g 261 (374)
T 2jhf_A 191 QGSTCAVFGL-GGVGLSVIMGCKAA---GAARIIGVDINKDKFAKAKE----V-GATECVNPQDYKKPIQEVLTEMSNGG 261 (374)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHT---TCSEEEEECSCGGGHHHHHH----T-TCSEEECGGGCSSCHHHHHHHHTTSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHc---CCCeEEEEcCCHHHHHHHHH----h-CCceEecccccchhHHHHHHHHhCCC
Confidence 3478999996 46544666666542 55 89999999999887753 4 654 22221 2344445443 37
Q ss_pred ccEEEEeCCCcccHHHHH-HhccCCCc-eEEEEeC
Q 027409 114 VDFLVVDCTSKDFARVLR-FARFSNKG-AVLAFKN 146 (223)
Q Consensus 114 fDfVFIDa~K~~Y~~~f~-~~~~l~~G-gvIV~DN 146 (223)
+|+|| |+.-. ...++ .++.+++| |.+|.=.
T Consensus 262 ~D~vi-d~~g~--~~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 262 VDFSF-EVIGR--LDTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp BSEEE-ECSCC--HHHHHHHHHHBCTTTCEEEECS
T ss_pred CcEEE-ECCCC--HHHHHHHHHHhhcCCcEEEEec
Confidence 99886 65422 33454 45667888 8877543
No 361
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=91.02 E-value=0.82 Score=35.01 Aligned_cols=96 Identities=7% Similarity=0.001 Sum_probs=56.3
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCc-hHHHHHHHHHHhhcCceEEEEecchH--HHhcC--CCCcc
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDE-RSRLAYVKAMYDVVGWVSEVIVRQAE--EVMGE--LKGVD 115 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~-e~~~~Ar~~~~~a~G~~I~li~GdA~--evL~~--L~~fD 115 (223)
..++|+=+|+ |..++.++-. ....+-.++-||.++ ++.+..++.+.. | ++++.||+. +.|.+ ++..|
T Consensus 2 ~~~~vlI~G~--G~vG~~la~~--L~~~g~~V~vid~~~~~~~~~~~~~~~~--~--~~~i~gd~~~~~~l~~a~i~~ad 73 (153)
T 1id1_A 2 RKDHFIVCGH--SILAINTILQ--LNQRGQNVTVISNLPEDDIKQLEQRLGD--N--ADVIPGDSNDSSVLKKAGIDRCR 73 (153)
T ss_dssp CCSCEEEECC--SHHHHHHHHH--HHHTTCCEEEEECCCHHHHHHHHHHHCT--T--CEEEESCTTSHHHHHHHTTTTCS
T ss_pred CCCcEEEECC--CHHHHHHHHH--HHHCCCCEEEEECCChHHHHHHHHhhcC--C--CeEEEcCCCCHHHHHHcChhhCC
Confidence 3467888886 6655655433 323355799999984 555444443322 3 578899986 45653 56899
Q ss_pred EEEEeCCCcccHHHH-HHhccCCCceEEEE
Q 027409 116 FLVVDCTSKDFARVL-RFARFSNKGAVLAF 144 (223)
Q Consensus 116 fVFIDa~K~~Y~~~f-~~~~~l~~GgvIV~ 144 (223)
.|++-.....--... ..++.+.+..-|++
T Consensus 74 ~vi~~~~~d~~n~~~~~~a~~~~~~~~ii~ 103 (153)
T 1id1_A 74 AILALSDNDADNAFVVLSAKDMSSDVKTVL 103 (153)
T ss_dssp EEEECSSCHHHHHHHHHHHHHHTSSSCEEE
T ss_pred EEEEecCChHHHHHHHHHHHHHCCCCEEEE
Confidence 999877544322222 23444434334443
No 362
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=90.98 E-value=0.35 Score=42.61 Aligned_cols=93 Identities=12% Similarity=0.069 Sum_probs=57.1
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCC---CCc
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGEL---KGV 114 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L---~~f 114 (223)
..-++||-+|.+.|.+..++.+|.+ .+.+|+.++.++++.+.++ +. |.. ++....+..+.+.++ ..+
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~---~Ga~Vi~~~~~~~~~~~~~----~~-ga~~~~d~~~~~~~~~~~~~~~~~~~ 240 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARA---YGLKILGTAGTEEGQKIVL----QN-GAHEVFNHREVNYIDKIKKYVGEKGI 240 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHH---TTCEEEEEESSHHHHHHHH----HT-TCSEEEETTSTTHHHHHHHHHCTTCE
T ss_pred CCcCEEEEECCCChHHHHHHHHHHH---CCCEEEEEeCChhHHHHHH----Hc-CCCEEEeCCCchHHHHHHHHcCCCCc
Confidence 3457899999876654455555543 3679999999998877664 34 544 333333444444432 269
Q ss_pred cEEEEeCCCcccHHHHH-HhccCCCceEEEE
Q 027409 115 DFLVVDCTSKDFARVLR-FARFSNKGAVLAF 144 (223)
Q Consensus 115 DfVFIDa~K~~Y~~~f~-~~~~l~~GgvIV~ 144 (223)
|.|| |+.-. ..++ .+..+++||.+|.
T Consensus 241 D~vi-~~~G~---~~~~~~~~~l~~~G~iv~ 267 (351)
T 1yb5_A 241 DIII-EMLAN---VNLSKDLSLLSHGGRVIV 267 (351)
T ss_dssp EEEE-ESCHH---HHHHHHHHHEEEEEEEEE
T ss_pred EEEE-ECCCh---HHHHHHHHhccCCCEEEE
Confidence 9886 55432 2343 4566778887775
No 363
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=90.94 E-value=0.33 Score=42.73 Aligned_cols=94 Identities=11% Similarity=0.004 Sum_probs=57.0
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCC---CCcc
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGEL---KGVD 115 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L---~~fD 115 (223)
.-++||-+|.+.|.+..++.+|.+ .+.+|+.+++++++.+.+++ . |.. +.....+..+.+.++ ..+|
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~---~Ga~Vi~~~~~~~~~~~~~~----~-g~~~~~~~~~~~~~~~~~~~~~~~~~d 233 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRM---AGAIPLVTAGSQKKLQMAEK----L-GAAAGFNYKKEDFSEATLKFTKGAGVN 233 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHH---TTCEEEEEESCHHHHHHHHH----H-TCSEEEETTTSCHHHHHHHHTTTSCEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHH---cCCEEEEEeCCHHHHHHHHH----c-CCcEEEecCChHHHHHHHHHhcCCCce
Confidence 447899999665654345455543 36799999999998877743 3 443 333333444444432 2699
Q ss_pred EEEEeCCCcccHHHHH-HhccCCCceEEEEeC
Q 027409 116 FLVVDCTSKDFARVLR-FARFSNKGAVLAFKN 146 (223)
Q Consensus 116 fVFIDa~K~~Y~~~f~-~~~~l~~GgvIV~DN 146 (223)
.||-=+... .++ .+..+++||.+|.=.
T Consensus 234 ~vi~~~G~~----~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 234 LILDCIGGS----YWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp EEEESSCGG----GHHHHHHHEEEEEEEEECC
T ss_pred EEEECCCch----HHHHHHHhccCCCEEEEEe
Confidence 886444332 333 445667888887643
No 364
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=90.92 E-value=0.6 Score=40.68 Aligned_cols=94 Identities=13% Similarity=0.005 Sum_probs=57.8
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCC-CCccE
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGEL-KGVDF 116 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L-~~fDf 116 (223)
..-++||-+|.+ |.+..++.+|.+ .+.+|+.+++++++.+.+++ . |.. ++....|..+.+.++ ..+|+
T Consensus 163 ~~g~~VlV~GaG-~vG~~~~~~a~~---~Ga~Vi~~~~~~~~~~~~~~----l-Ga~~~~d~~~~~~~~~~~~~~~~~d~ 233 (339)
T 1rjw_A 163 KPGEWVAIYGIG-GLGHVAVQYAKA---MGLNVVAVDIGDEKLELAKE----L-GADLVVNPLKEDAAKFMKEKVGGVHA 233 (339)
T ss_dssp CTTCEEEEECCS-TTHHHHHHHHHH---TTCEEEEECSCHHHHHHHHH----T-TCSEEECTTTSCHHHHHHHHHSSEEE
T ss_pred CCCCEEEEECCC-HHHHHHHHHHHH---cCCEEEEEeCCHHHHHHHHH----C-CCCEEecCCCccHHHHHHHHhCCCCE
Confidence 345789999984 554456666654 36799999999998887764 4 654 222223433433332 47998
Q ss_pred EEEeCCCcccHHHHH-HhccCCCceEEEEe
Q 027409 117 LVVDCTSKDFARVLR-FARFSNKGAVLAFK 145 (223)
Q Consensus 117 VFIDa~K~~Y~~~f~-~~~~l~~GgvIV~D 145 (223)
|| |+.- ....++ .+..+++||.++.=
T Consensus 234 vi-d~~g--~~~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 234 AV-VTAV--SKPAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp EE-ESSC--CHHHHHHHHHHEEEEEEEEEC
T ss_pred EE-ECCC--CHHHHHHHHHHhhcCCEEEEe
Confidence 86 4432 223454 44566778877753
No 365
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=90.88 E-value=0.66 Score=33.77 Aligned_cols=64 Identities=9% Similarity=0.052 Sum_probs=48.8
Q ss_pred CcEEEEEeCCchHHHHHHHHHHhhcC-ceEEEEecchHHHhcCC--CCccEEEEeCCCcc--cHHHHHHhc
Q 027409 69 CARHVCIVPDERSRLAYVKAMYDVVG-WVSEVIVRQAEEVMGEL--KGVDFLVVDCTSKD--FARVLRFAR 134 (223)
Q Consensus 69 ~g~i~TIE~d~e~~~~Ar~~~~~a~G-~~I~li~GdA~evL~~L--~~fDfVFIDa~K~~--Y~~~f~~~~ 134 (223)
..+|.-+|.|+...+.-+..+++. | +.+. ...++.+.+..+ .++|+|++|..-.. -.++++.++
T Consensus 14 ~~~ilivdd~~~~~~~l~~~L~~~-g~~~v~-~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~ 82 (135)
T 3snk_A 14 RKQVALFSSDPNFKRDVATRLDAL-AIYDVR-VSETDDFLKGPPADTRPGIVILDLGGGDLLGKPGIVEAR 82 (135)
T ss_dssp CEEEEEECSCHHHHHHHHHHHHHT-SSEEEE-EECGGGGGGCCCTTCCCSEEEEEEETTGGGGSTTHHHHH
T ss_pred CcEEEEEcCCHHHHHHHHHHHhhc-CCeEEE-EeccHHHHHHHHhccCCCEEEEeCCCCCchHHHHHHHHH
Confidence 458999999999999999999998 9 8755 667788888776 37999999975332 233444443
No 366
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=90.88 E-value=0.33 Score=36.54 Aligned_cols=69 Identities=6% Similarity=0.090 Sum_probs=47.7
Q ss_pred CeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHH--HhcCC--CCccEEE
Q 027409 43 KLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEE--VMGEL--KGVDFLV 118 (223)
Q Consensus 43 k~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~e--vL~~L--~~fDfVF 118 (223)
++|+=+|+ |+.++.++.... ..+-.++-+|.|++..+.+++ . | ++++.||+.+ .|.++ ..+|+|+
T Consensus 7 ~~v~I~G~--G~iG~~la~~L~--~~g~~V~~id~~~~~~~~~~~----~-~--~~~~~gd~~~~~~l~~~~~~~~d~vi 75 (141)
T 3llv_A 7 YEYIVIGS--EAAGVGLVRELT--AAGKKVLAVDKSKEKIELLED----E-G--FDAVIADPTDESFYRSLDLEGVSAVL 75 (141)
T ss_dssp CSEEEECC--SHHHHHHHHHHH--HTTCCEEEEESCHHHHHHHHH----T-T--CEEEECCTTCHHHHHHSCCTTCSEEE
T ss_pred CEEEEECC--CHHHHHHHHHHH--HCCCeEEEEECCHHHHHHHHH----C-C--CcEEECCCCCHHHHHhCCcccCCEEE
Confidence 57898987 565666554433 335679999999987766553 3 4 4678899853 56543 5799998
Q ss_pred EeCC
Q 027409 119 VDCT 122 (223)
Q Consensus 119 IDa~ 122 (223)
+=..
T Consensus 76 ~~~~ 79 (141)
T 3llv_A 76 ITGS 79 (141)
T ss_dssp ECCS
T ss_pred EecC
Confidence 8665
No 367
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=90.80 E-value=0.17 Score=40.08 Aligned_cols=91 Identities=14% Similarity=0.058 Sum_probs=48.4
Q ss_pred cchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchH---HHhcCC-CCccEEEEeCCCcccH
Q 027409 52 GGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAE---EVMGEL-KGVDFLVVDCTSKDFA 127 (223)
Q Consensus 52 ~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~---evL~~L-~~fDfVFIDa~K~~Y~ 127 (223)
.|=++.++.||.+....+-++.-||.|++... ...+... ...+.++..+.. +.|..+ +.||+|+||+......
T Consensus 13 ~GKTt~a~~la~~la~~g~~vlliD~D~~~~~--~~~~~~~-~~~~~~~~~~~~~l~~~l~~l~~~yD~viiD~~~~~~~ 89 (206)
T 4dzz_A 13 SGKTTAVINIATALSRSGYNIAVVDTDPQMSL--TNWSKAG-KAAFDVFTAASEKDVYGIRKDLADYDFAIVDGAGSLSV 89 (206)
T ss_dssp SSHHHHHHHHHHHHHHTTCCEEEEECCTTCHH--HHHHTTS-CCSSEEEECCSHHHHHTHHHHTTTSSEEEEECCSSSSH
T ss_pred ccHHHHHHHHHHHHHHCCCeEEEEECCCCCCH--HHHHhcC-CCCCcEEecCcHHHHHHHHHhcCCCCEEEEECCCCCCH
Confidence 34333344444444444568999999987432 2333322 212556555432 233333 3799999999877754
Q ss_pred HHHHHhccCCCceEEEEeC
Q 027409 128 RVLRFARFSNKGAVLAFKN 146 (223)
Q Consensus 128 ~~f~~~~~l~~GgvIV~DN 146 (223)
.....+.. ...-+++++.
T Consensus 90 ~~~~~l~~-ad~viiv~~~ 107 (206)
T 4dzz_A 90 ITSAAVMV-SDLVIIPVTP 107 (206)
T ss_dssp HHHHHHHH-CSEEEEEECS
T ss_pred HHHHHHHH-CCEEEEEecC
Confidence 33333322 3334555544
No 368
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=90.78 E-value=0.83 Score=40.17 Aligned_cols=95 Identities=20% Similarity=0.173 Sum_probs=59.7
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCc-EEEEEeCCchHHHHHHHHHHhhcCce--EEEEe--cchHHHhcCC--CC
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCA-RHVCIVPDERSRLAYVKAMYDVVGWV--SEVIV--RQAEEVMGEL--KG 113 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g-~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~--GdA~evL~~L--~~ 113 (223)
.-++||-+|+ .|.+..++.+|++. +. +|+.++.++++.+.|++ . |.. +.... .+..+.+.++ +.
T Consensus 190 ~g~~VlV~Ga-G~vG~~avqla~~~---Ga~~Vi~~~~~~~~~~~~~~----l-Ga~~vi~~~~~~~~~~~~v~~~~~~g 260 (373)
T 2fzw_A 190 PGSVCAVFGL-GGVGLAVIMGCKVA---GASRIIGVDINKDKFARAKE----F-GATECINPQDFSKPIQEVLIEMTDGG 260 (373)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHH---TCSEEEEECSCGGGHHHHHH----H-TCSEEECGGGCSSCHHHHHHHHTTSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHc---CCCeEEEEcCCHHHHHHHHH----c-CCceEeccccccccHHHHHHHHhCCC
Confidence 3468999996 46555666776653 55 89999999999888764 4 554 22211 2344445443 37
Q ss_pred ccEEEEeCCCcccHHHHH-HhccCCCc-eEEEEeCC
Q 027409 114 VDFLVVDCTSKDFARVLR-FARFSNKG-AVLAFKNA 147 (223)
Q Consensus 114 fDfVFIDa~K~~Y~~~f~-~~~~l~~G-gvIV~DNv 147 (223)
+|+|| |+.- -...++ .++.+++| |.+|.=..
T Consensus 261 ~D~vi-d~~g--~~~~~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 261 VDYSF-ECIG--NVKVMRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp BSEEE-ECSC--CHHHHHHHHHTBCTTTCEEEECSC
T ss_pred CCEEE-ECCC--cHHHHHHHHHhhccCCcEEEEEec
Confidence 99886 6542 233454 45777888 88875443
No 369
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=90.74 E-value=1.6 Score=31.66 Aligned_cols=65 Identities=12% Similarity=0.059 Sum_probs=47.9
Q ss_pred CCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCccEEEEeCCCcc--cHHHHHHhc
Q 027409 68 TCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVDFLVVDCTSKD--FARVLRFAR 134 (223)
Q Consensus 68 ~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fDfVFIDa~K~~--Y~~~f~~~~ 134 (223)
...+|.-+|.|+...+.-+..+++. |+.|. ...++.+.+..+ ..+|+|++|..-.. -.++++.++
T Consensus 6 ~~~~iLivdd~~~~~~~l~~~L~~~-g~~v~-~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~ 74 (142)
T 3cg4_A 6 HKGDVMIVDDDAHVRIAVKTILSDA-GFHII-SADSGGQCIDLLKKGFSGVVLLDIMMPGMDGWDTIRAIL 74 (142)
T ss_dssp CCCEEEEECSCHHHHHHHHHHHHHT-TCEEE-EESSHHHHHHHHHTCCCEEEEEESCCSSSCHHHHHHHHH
T ss_pred CCCeEEEEcCCHHHHHHHHHHHHHC-CeEEE-EeCCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHH
Confidence 3568999999999999999999998 98854 456666655544 36999999987443 345555554
No 370
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=90.73 E-value=0.41 Score=41.51 Aligned_cols=94 Identities=11% Similarity=0.005 Sum_probs=57.4
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEe-cchHHHhcCC--CCc
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIV-RQAEEVMGEL--KGV 114 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~-GdA~evL~~L--~~f 114 (223)
..-++||-+|++.|.+..++.+|.+ .+.+|+.++.++++.+.+++ +. |.. ++... .+..+.+.++ ..+
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~---~G~~V~~~~~~~~~~~~~~~---~~-g~~~~~d~~~~~~~~~~~~~~~~~~~ 226 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKM---MGCYVVGSAGSKEKVDLLKT---KF-GFDDAFNYKEESDLTAALKRCFPNGI 226 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHH---TTCEEEEEESSHHHHHHHHH---TS-CCSEEEETTSCSCSHHHHHHHCTTCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHH---Hc-CCceEEecCCHHHHHHHHHHHhCCCC
Confidence 3457899999865654345455543 36799999999988777653 34 554 32222 1333444332 369
Q ss_pred cEEEEeCCCcccHHHHH-HhccCCCceEEEE
Q 027409 115 DFLVVDCTSKDFARVLR-FARFSNKGAVLAF 144 (223)
Q Consensus 115 DfVFIDa~K~~Y~~~f~-~~~~l~~GgvIV~ 144 (223)
|.|| |+.-. ..++ .+..+++||.+|.
T Consensus 227 d~vi-~~~g~---~~~~~~~~~l~~~G~~v~ 253 (345)
T 2j3h_A 227 DIYF-ENVGG---KMLDAVLVNMNMHGRIAV 253 (345)
T ss_dssp EEEE-ESSCH---HHHHHHHTTEEEEEEEEE
T ss_pred cEEE-ECCCH---HHHHHHHHHHhcCCEEEE
Confidence 9886 44432 2454 4567788898875
No 371
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=90.71 E-value=0.46 Score=41.55 Aligned_cols=92 Identities=14% Similarity=0.092 Sum_probs=56.9
Q ss_pred CeEEEEccCcchHHHHHHHHHhcCCCCc-EEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCC--CCccEE
Q 027409 43 KLIVEAWTHGGPITTSIGLAIAARHTCA-RHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGEL--KGVDFL 117 (223)
Q Consensus 43 k~ILEIGT~~Gys~Stl~la~A~~~~~g-~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L--~~fDfV 117 (223)
++||=.|.+.|.+..++.+|.+ .+. +|+.++.++++.+.+++. . |.. +.....+..+.+.++ +.+|.|
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~---~Ga~~Vi~~~~~~~~~~~~~~~---~-g~~~~~d~~~~~~~~~~~~~~~~~~d~v 234 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHF---LGCSRVVGICGTHEKCILLTSE---L-GFDAAINYKKDNVAEQLRESCPAGVDVY 234 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHH---TTCSEEEEEESCHHHHHHHHHT---S-CCSEEEETTTSCHHHHHHHHCTTCEEEE
T ss_pred cEEEEECCCcHHHHHHHHHHHH---CCCCeEEEEeCCHHHHHHHHHH---c-CCceEEecCchHHHHHHHHhcCCCCCEE
Confidence 7999999876754444455433 366 999999998877766542 3 544 333233444444332 269988
Q ss_pred EEeCCCcccHHHHH-HhccCCCceEEEEe
Q 027409 118 VVDCTSKDFARVLR-FARFSNKGAVLAFK 145 (223)
Q Consensus 118 FIDa~K~~Y~~~f~-~~~~l~~GgvIV~D 145 (223)
|--+. . ..++ .+..+++||.+|.=
T Consensus 235 i~~~G-~---~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 235 FDNVG-G---NISDTVISQMNENSHIILC 259 (357)
T ss_dssp EESCC-H---HHHHHHHHTEEEEEEEEEC
T ss_pred EECCC-H---HHHHHHHHHhccCcEEEEE
Confidence 64443 2 4555 45677888988753
No 372
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=90.68 E-value=2.4 Score=30.68 Aligned_cols=67 Identities=10% Similarity=0.064 Sum_probs=49.1
Q ss_pred CCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC---CCccEEEEeCCCcc--cHHHHHHhccC
Q 027409 68 TCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL---KGVDFLVVDCTSKD--FARVLRFARFS 136 (223)
Q Consensus 68 ~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L---~~fDfVFIDa~K~~--Y~~~f~~~~~l 136 (223)
+..+|.-+|.|+...+.-+..++.. |+.+. ...++.+.+..+ ..+|+|++|..-.. -.++++.++..
T Consensus 14 ~~~~ilivdd~~~~~~~l~~~L~~~-g~~v~-~~~~~~~al~~l~~~~~~dlvilD~~l~~~~g~~~~~~l~~~ 85 (138)
T 2b4a_A 14 QPFRVTLVEDEPSHATLIQYHLNQL-GAEVT-VHPSGSAFFQHRSQLSTCDLLIVSDQLVDLSIFSLLDIVKEQ 85 (138)
T ss_dssp CCCEEEEECSCHHHHHHHHHHHHHT-TCEEE-EESSHHHHHHTGGGGGSCSEEEEETTCTTSCHHHHHHHHTTS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHHc-CCEEE-EeCCHHHHHHHHHhCCCCCEEEEeCCCCCCCHHHHHHHHHhh
Confidence 4578999999999999999999998 98754 456666666554 36999999986543 34555555433
No 373
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=90.67 E-value=1.2 Score=33.08 Aligned_cols=65 Identities=8% Similarity=0.019 Sum_probs=48.2
Q ss_pred CcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCccEEEEeCCCcc--cHHHHHHhcc
Q 027409 69 CARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVDFLVVDCTSKD--FARVLRFARF 135 (223)
Q Consensus 69 ~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fDfVFIDa~K~~--Y~~~f~~~~~ 135 (223)
.-+|.-+|.|+...+.-+..++.. |+.+. ...++.+.+..+ ..+|+|++|..-.. -.+++..++.
T Consensus 7 ~~~iLivdd~~~~~~~l~~~L~~~-g~~v~-~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~ 75 (154)
T 2rjn_A 7 NYTVMLVDDEQPILNSLKRLIKRL-GCNII-TFTSPLDALEALKGTSVQLVISDMRMPEMGGEVFLEQVAK 75 (154)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHTT-TCEEE-EESCHHHHHHHHTTSCCSEEEEESSCSSSCHHHHHHHHHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHHc-CCeEE-EeCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHH
Confidence 458999999999999999999998 98855 556666666544 36999999986443 3455555543
No 374
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=90.58 E-value=1.5 Score=32.51 Aligned_cols=63 Identities=16% Similarity=0.099 Sum_probs=48.6
Q ss_pred cEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCccEEEEeCCCcc--cHHHHHHhc
Q 027409 70 ARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVDFLVVDCTSKD--FARVLRFAR 134 (223)
Q Consensus 70 g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fDfVFIDa~K~~--Y~~~f~~~~ 134 (223)
.+|.-+|.|+...+.-+..+++. |+.+. ...++.+.+..+ ..+|+|++|..-.. -.++++.++
T Consensus 4 ~~ILivdd~~~~~~~l~~~L~~~-g~~v~-~~~~~~~a~~~l~~~~~dliild~~l~~~~g~~~~~~l~ 70 (155)
T 1qkk_A 4 PSVFLIDDDRDLRKAMQQTLELA-GFTVS-SFASATEALAGLSADFAGIVISDIRMPGMDGLALFRKIL 70 (155)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHT-TCEEE-EESCHHHHHHTCCTTCCSEEEEESCCSSSCHHHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHHHHHc-CcEEE-EECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHH
Confidence 57899999999999999999998 99855 567778877776 37999999986443 344555554
No 375
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=90.58 E-value=1.1 Score=31.88 Aligned_cols=63 Identities=10% Similarity=0.208 Sum_probs=47.2
Q ss_pred cEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCccEEEEeCCCc--ccHHHHHHhc
Q 027409 70 ARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVDFLVVDCTSK--DFARVLRFAR 134 (223)
Q Consensus 70 g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fDfVFIDa~K~--~Y~~~f~~~~ 134 (223)
-+|.-+|.|+...+.-++.+++. |+.+. ...++.+.+..+ ..+|+||+|..-. +-.++++.++
T Consensus 4 ~~ilivdd~~~~~~~l~~~L~~~-g~~v~-~~~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~ 70 (127)
T 3i42_A 4 QQALIVEDYQAAAETFKELLEML-GFQAD-YVMSGTDALHAMSTRGYDAVFIDLNLPDTSGLALVKQLR 70 (127)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHT-TEEEE-EESSHHHHHHHHHHSCCSEEEEESBCSSSBHHHHHHHHH
T ss_pred ceEEEEcCCHHHHHHHHHHHHHc-CCCEE-EECCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHH
Confidence 47899999999999999999998 99744 346676666655 4799999998633 3345566554
No 376
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=90.47 E-value=1.1 Score=39.46 Aligned_cols=95 Identities=14% Similarity=0.089 Sum_probs=58.9
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEe-cchHHHhcCC---CCc
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIV-RQAEEVMGEL---KGV 114 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~-GdA~evL~~L---~~f 114 (223)
.-++||-+|+ .|.+..++.+|.+ .+.+|+.++.++++.+.+++ . |.. +. .. .|..+.+.++ ..+
T Consensus 189 ~g~~VlV~G~-G~vG~~a~qla~~---~Ga~Vi~~~~~~~~~~~~~~----l-Ga~~vi~-~~~~~~~~~v~~~~~g~g~ 258 (363)
T 3uog_A 189 AGDRVVVQGT-GGVALFGLQIAKA---TGAEVIVTSSSREKLDRAFA----L-GADHGIN-RLEEDWVERVYALTGDRGA 258 (363)
T ss_dssp TTCEEEEESS-BHHHHHHHHHHHH---TTCEEEEEESCHHHHHHHHH----H-TCSEEEE-TTTSCHHHHHHHHHTTCCE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHH---cCCEEEEEecCchhHHHHHH----c-CCCEEEc-CCcccHHHHHHHHhCCCCc
Confidence 4479999994 4665566666654 36799999999998887755 4 554 33 11 3444545443 279
Q ss_pred cEEEEeCCCcccHHHHHHhccCCCceEEEEeCCC
Q 027409 115 DFLVVDCTSKDFARVLRFARFSNKGAVLAFKNAF 148 (223)
Q Consensus 115 DfVFIDa~K~~Y~~~f~~~~~l~~GgvIV~DNvl 148 (223)
|+||-=+....+. ..+..+++||.++.=...
T Consensus 259 D~vid~~g~~~~~---~~~~~l~~~G~iv~~G~~ 289 (363)
T 3uog_A 259 DHILEIAGGAGLG---QSLKAVAPDGRISVIGVL 289 (363)
T ss_dssp EEEEEETTSSCHH---HHHHHEEEEEEEEEECCC
T ss_pred eEEEECCChHHHH---HHHHHhhcCCEEEEEecC
Confidence 9887544432222 244556778887754443
No 377
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=90.47 E-value=0.4 Score=41.90 Aligned_cols=92 Identities=12% Similarity=0.010 Sum_probs=57.5
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCC--CCccE
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGEL--KGVDF 116 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L--~~fDf 116 (223)
.-++||=+|.+.|.+..++.+|.+ .+.+|+.++.++++.+.+++ . |.. +.. ..+..+.+.++ ..+|+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~---~Ga~Vi~~~~~~~~~~~~~~----l-Ga~~vi~~-~~~~~~~~~~~~~~g~Dv 220 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKA---YGLRVITTASRNETIEWTKK----M-GADIVLNH-KESLLNQFKTQGIELVDY 220 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHH---TTCEEEEECCSHHHHHHHHH----H-TCSEEECT-TSCHHHHHHHHTCCCEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHH---cCCEEEEEeCCHHHHHHHHh----c-CCcEEEEC-CccHHHHHHHhCCCCccE
Confidence 457899996554654456566653 36799999999998888876 4 544 222 12444444443 36997
Q ss_pred EEEeCCCcccHHHHH-HhccCCCceEEEE
Q 027409 117 LVVDCTSKDFARVLR-FARFSNKGAVLAF 144 (223)
Q Consensus 117 VFIDa~K~~Y~~~f~-~~~~l~~GgvIV~ 144 (223)
|| |+.- -...++ .+..+++||.+|.
T Consensus 221 v~-d~~g--~~~~~~~~~~~l~~~G~iv~ 246 (346)
T 3fbg_A 221 VF-CTFN--TDMYYDDMIQLVKPRGHIAT 246 (346)
T ss_dssp EE-ESSC--HHHHHHHHHHHEEEEEEEEE
T ss_pred EE-ECCC--chHHHHHHHHHhccCCEEEE
Confidence 76 5542 234454 4466688898874
No 378
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=90.45 E-value=0.52 Score=35.45 Aligned_cols=64 Identities=16% Similarity=0.212 Sum_probs=47.7
Q ss_pred CcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCccEEEEeCCCc--ccHHHHHHhc
Q 027409 69 CARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVDFLVVDCTSK--DFARVLRFAR 134 (223)
Q Consensus 69 ~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fDfVFIDa~K~--~Y~~~f~~~~ 134 (223)
..+|.-+|.|+...+.-++.+++. |+.|. ...++.+.+..+ .+||+||+|..-. +-.++++.++
T Consensus 7 ~~~ILivdd~~~~~~~l~~~L~~~-g~~v~-~~~~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~lr 74 (154)
T 3gt7_A 7 AGEILIVEDSPTQAEHLKHILEET-GYQTE-HVRNGREAVRFLSLTRPDLIISDVLMPEMDGYALCRWLK 74 (154)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHTT-TCEEE-EESSHHHHHHHHTTCCCSEEEEESCCSSSCHHHHHHHHH
T ss_pred CCcEEEEeCCHHHHHHHHHHHHHC-CCEEE-EeCCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHH
Confidence 468999999999999999999998 98853 446666665544 3799999998633 3345555553
No 379
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=90.43 E-value=0.46 Score=41.49 Aligned_cols=97 Identities=18% Similarity=0.121 Sum_probs=58.8
Q ss_pred hcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCC---CC
Q 027409 39 GWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGEL---KG 113 (223)
Q Consensus 39 ~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L---~~ 113 (223)
...-++||-+|.+.|.+..++.+|.+. .+.+|+.++.++++.+.+++ . |.. +.....+..+.+.++ +.
T Consensus 168 ~~~g~~vlV~Gagg~iG~~~~~~a~~~--~Ga~Vi~~~~~~~~~~~~~~----~-g~~~~~~~~~~~~~~~~~~~~~~~~ 240 (347)
T 1jvb_A 168 LDPTKTLLVVGAGGGLGTMAVQIAKAV--SGATIIGVDVREEAVEAAKR----A-GADYVINASMQDPLAEIRRITESKG 240 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHH--TCCEEEEEESSHHHHHHHHH----H-TCSEEEETTTSCHHHHHHHHTTTSC
T ss_pred CCCCCEEEEECCCccHHHHHHHHHHHc--CCCeEEEEcCCHHHHHHHHH----h-CCCEEecCCCccHHHHHHHHhcCCC
Confidence 334578999999856543555555432 15789999999998887754 3 544 332223333333322 36
Q ss_pred ccEEEEeCCCcccHHHHH-HhccCCCceEEEEe
Q 027409 114 VDFLVVDCTSKDFARVLR-FARFSNKGAVLAFK 145 (223)
Q Consensus 114 fDfVFIDa~K~~Y~~~f~-~~~~l~~GgvIV~D 145 (223)
+|.||--+.. ...++ .+..+++||.+|.=
T Consensus 241 ~d~vi~~~g~---~~~~~~~~~~l~~~G~iv~~ 270 (347)
T 1jvb_A 241 VDAVIDLNNS---EKTLSVYPKALAKQGKYVMV 270 (347)
T ss_dssp EEEEEESCCC---HHHHTTGGGGEEEEEEEEEC
T ss_pred ceEEEECCCC---HHHHHHHHHHHhcCCEEEEE
Confidence 9988744432 33555 45667888988763
No 380
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=90.39 E-value=0.7 Score=33.49 Aligned_cols=63 Identities=6% Similarity=-0.077 Sum_probs=46.8
Q ss_pred cEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCccEEEEeCCCc-------ccHHHHHHhc
Q 027409 70 ARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVDFLVVDCTSK-------DFARVLRFAR 134 (223)
Q Consensus 70 g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fDfVFIDa~K~-------~Y~~~f~~~~ 134 (223)
-+|.-+|.|+...+.-+..+++. |+.+. ...++.+.+..+ ..+|+|++|..-. .-.++++.++
T Consensus 4 ~~ilivdd~~~~~~~l~~~L~~~-g~~v~-~~~~~~~a~~~l~~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~ 75 (140)
T 2qr3_A 4 GTIIIVDDNKGVLTAVQLLLKNH-FSKVI-TLSSPVSLSTVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIK 75 (140)
T ss_dssp CEEEEECSCHHHHHHHHHHHTTT-SSEEE-EECCHHHHHHHHHHSCEEEEEEETTTTC-----CCHHHHHHHHH
T ss_pred ceEEEEeCCHHHHHHHHHHHHhC-CcEEE-EeCCHHHHHHHHHcCCCCEEEEeCCcCCCCCCCccHHHHHHHHH
Confidence 47899999999999999999998 98854 456666666554 3799999998643 3345555554
No 381
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=90.37 E-value=1.8 Score=31.40 Aligned_cols=64 Identities=13% Similarity=0.007 Sum_probs=49.1
Q ss_pred CcEEEEEeCCchHHHHHHHHHHh-hcCceEEEEecchHHHhcCC---CCccEEEEeCCCc---ccHHHHHHhc
Q 027409 69 CARHVCIVPDERSRLAYVKAMYD-VVGWVSEVIVRQAEEVMGEL---KGVDFLVVDCTSK---DFARVLRFAR 134 (223)
Q Consensus 69 ~g~i~TIE~d~e~~~~Ar~~~~~-a~G~~I~li~GdA~evL~~L---~~fDfVFIDa~K~---~Y~~~f~~~~ 134 (223)
..+|.-+|.|+...+.-+..+++ . |+.+. ...++.+.+..+ ..+|+|++|..-. +-.++++.++
T Consensus 4 ~~~ilivdd~~~~~~~l~~~L~~~~-~~~v~-~~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~ 74 (140)
T 3lua_A 4 DGTVLLIDYFEYEREKTKIIFDNIG-EYDFI-EVENLKKFYSIFKDLDSITLIIMDIAFPVEKEGLEVLSAIR 74 (140)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHHC-CCEEE-EECSHHHHHTTTTTCCCCSEEEECSCSSSHHHHHHHHHHHH
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhcc-CccEE-EECCHHHHHHHHhcCCCCcEEEEeCCCCCCCcHHHHHHHHH
Confidence 45899999999999999999999 7 88855 677888877765 3699999998754 2344455443
No 382
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=90.35 E-value=0.77 Score=33.25 Aligned_cols=66 Identities=11% Similarity=-0.008 Sum_probs=49.4
Q ss_pred CCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCccEEEEeCCCc---ccHHHHHHhc
Q 027409 68 TCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVDFLVVDCTSK---DFARVLRFAR 134 (223)
Q Consensus 68 ~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fDfVFIDa~K~---~Y~~~f~~~~ 134 (223)
..-+|.-+|.|+...+.-+..+++. |+.+.....++.+.+..+ ..+|+||+|..-. .-.++++.++
T Consensus 8 ~~~~iLivdd~~~~~~~l~~~L~~~-g~~v~~~~~~~~~a~~~~~~~~~dlii~d~~~~~~~~g~~~~~~l~ 78 (140)
T 3cg0_A 8 DLPGVLIVEDGRLAAATLRIQLESL-GYDVLGVFDNGEEAVRCAPDLRPDIALVDIMLCGALDGVETAARLA 78 (140)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHHHCCSEEEEESSCCSSSCHHHHHHHHH
T ss_pred CCceEEEEECCHHHHHHHHHHHHHC-CCeeEEEECCHHHHHHHHHhCCCCEEEEecCCCCCCCHHHHHHHHH
Confidence 3468999999999999999999998 998655567777766655 3799999997642 3445555553
No 383
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=90.29 E-value=1 Score=39.89 Aligned_cols=93 Identities=15% Similarity=0.112 Sum_probs=65.8
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCc-EEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcC-CCCccEEE
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCA-RHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGE-LKGVDFLV 118 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g-~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~-L~~fDfVF 118 (223)
+..++|++-||+|- .++.+..+ |. .+..+|+|+...+..+.|+... . .||..++..+ +..+|+|+
T Consensus 10 ~~~~~~dLFaG~Gg--~~~g~~~a----G~~~v~~~e~d~~a~~t~~~N~~~~-~------~~Di~~~~~~~~~~~D~l~ 76 (327)
T 2c7p_A 10 TGLRFIDLFAGLGG--FRLALESC----GAECVYSNEWDKYAQEVYEMNFGEK-P------EGDITQVNEKTIPDHDILC 76 (327)
T ss_dssp TTCEEEEETCTTTH--HHHHHHHT----TCEEEEEECCCHHHHHHHHHHHSCC-C------BSCGGGSCGGGSCCCSEEE
T ss_pred CCCcEEEECCCcCH--HHHHHHHC----CCeEEEEEeCCHHHHHHHHHHcCCC-C------cCCHHHcCHhhCCCCCEEE
Confidence 34689999999984 66666543 33 4778999999999999998766 2 5888886653 45799999
Q ss_pred Ee--------C-------CC--cccHHHHHHhccCCCceEEEEeCC
Q 027409 119 VD--------C-------TS--KDFARVLRFARFSNKGAVLAFKNA 147 (223)
Q Consensus 119 ID--------a-------~K--~~Y~~~f~~~~~l~~GgvIV~DNv 147 (223)
.+ | +. ..+.+|++.+..++|- +++..||
T Consensus 77 ~gpPCQ~fS~ag~~~g~~d~r~~L~~~~~r~i~~~~P~-~~~~ENV 121 (327)
T 2c7p_A 77 AGFPCQAFSISGKQKGFEDSRGTLFFDIARIVREKKPK-VVFMENV 121 (327)
T ss_dssp EECCCTTTCTTSCCCGGGSTTSCHHHHHHHHHHHHCCS-EEEEEEE
T ss_pred ECCCCCCcchhcccCCCcchhhHHHHHHHHHHHhccCc-EEEEeCc
Confidence 87 1 11 1345566666555664 6777887
No 384
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=90.22 E-value=2.2 Score=36.99 Aligned_cols=97 Identities=16% Similarity=0.166 Sum_probs=55.5
Q ss_pred eEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhc--CceEEEEecchHHHhcCCCCccEEEEeC
Q 027409 44 LIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVV--GWVSEVIVRQAEEVMGELKGVDFLVVDC 121 (223)
Q Consensus 44 ~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~--G~~I~li~GdA~evL~~L~~fDfVFIDa 121 (223)
+|.=||+ |+.+++++...+.....+.|+-+|+|+++.+.....+.+.. ...+++..+|. + .+..-|+|++=+
T Consensus 2 kI~VIGa--G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~-~---a~~~aDvVIi~~ 75 (304)
T 2v6b_A 2 KVGVVGT--GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGGH-S---ELADAQVVILTA 75 (304)
T ss_dssp EEEEECC--SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEECG-G---GGTTCSEEEECC
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECCH-H---HhCCCCEEEEcC
Confidence 5777887 56678877766654333489999999887664333343330 11244444442 3 345789999987
Q ss_pred CCccc----------------HHHHHHhccCCCceEEE-EeC
Q 027409 122 TSKDF----------------ARVLRFARFSNKGAVLA-FKN 146 (223)
Q Consensus 122 ~K~~Y----------------~~~f~~~~~l~~GgvIV-~DN 146 (223)
...+. .++++.+....|+++|+ +-|
T Consensus 76 ~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tN 117 (304)
T 2v6b_A 76 GANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSN 117 (304)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHCSSSEEEECSS
T ss_pred CCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecC
Confidence 43221 44445444445777654 444
No 385
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=90.17 E-value=1.7 Score=31.50 Aligned_cols=64 Identities=17% Similarity=0.135 Sum_probs=48.2
Q ss_pred CcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCccEEEEeCCCc--ccHHHHHHhc
Q 027409 69 CARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVDFLVVDCTSK--DFARVLRFAR 134 (223)
Q Consensus 69 ~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fDfVFIDa~K~--~Y~~~f~~~~ 134 (223)
.-+|.-+|.|+...+.-+..+++. |+.+ ....++.+.+..+ .+||+|++|..-. +-.++++.++
T Consensus 6 ~~~iLivdd~~~~~~~l~~~l~~~-g~~v-~~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~ 73 (140)
T 3grc_A 6 RPRILICEDDPDIARLLNLMLEKG-GFDS-DMVHSAAQALEQVARRPYAAMTVDLNLPDQDGVSLIRALR 73 (140)
T ss_dssp CSEEEEECSCHHHHHHHHHHHHHT-TCEE-EEECSHHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHH
T ss_pred CCCEEEEcCCHHHHHHHHHHHHHC-CCeE-EEECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHH
Confidence 468999999999999999999998 9985 3456777766655 4799999998633 3345555554
No 386
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=90.16 E-value=0.33 Score=42.39 Aligned_cols=93 Identities=16% Similarity=0.133 Sum_probs=58.3
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCc-EEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCC---CCc
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCA-RHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGEL---KGV 114 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g-~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L---~~f 114 (223)
.-++||-+|. .|.+..++.+|.+. +. +|+.++.++++.+.+++ . |.. +.....+..+.+.++ ..+
T Consensus 167 ~g~~VlV~Ga-G~vG~~~~q~a~~~---Ga~~Vi~~~~~~~~~~~~~~----~-Ga~~~~~~~~~~~~~~v~~~~~g~g~ 237 (348)
T 2d8a_A 167 SGKSVLITGA-GPLGLLGIAVAKAS---GAYPVIVSEPSDFRRELAKK----V-GADYVINPFEEDVVKEVMDITDGNGV 237 (348)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHT---TCCSEEEECSCHHHHHHHHH----H-TCSEEECTTTSCHHHHHHHHTTTSCE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHc---CCCEEEEECCCHHHHHHHHH----h-CCCEEECCCCcCHHHHHHHHcCCCCC
Confidence 3478999998 46555666666542 55 89999999998887764 4 544 222233445555443 269
Q ss_pred cEEEEeCCCcccHHHHH-HhccCCCceEEEEe
Q 027409 115 DFLVVDCTSKDFARVLR-FARFSNKGAVLAFK 145 (223)
Q Consensus 115 DfVFIDa~K~~Y~~~f~-~~~~l~~GgvIV~D 145 (223)
|+|| |+.- ....++ .++.+++||.+|.=
T Consensus 238 D~vi-d~~g--~~~~~~~~~~~l~~~G~iv~~ 266 (348)
T 2d8a_A 238 DVFL-EFSG--APKALEQGLQAVTPAGRVSLL 266 (348)
T ss_dssp EEEE-ECSC--CHHHHHHHHHHEEEEEEEEEC
T ss_pred CEEE-ECCC--CHHHHHHHHHHHhcCCEEEEE
Confidence 9986 5542 234454 44566788887753
No 387
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=90.08 E-value=2.5 Score=35.16 Aligned_cols=79 Identities=14% Similarity=0.076 Sum_probs=58.9
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHH------Hh----c
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEE------VM----G 109 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~e------vL----~ 109 (223)
..-|.+|=.|.+.|. +.+++...+. .+.+|+.++++++..+...+.+... |..+.++.+|..+ .+ .
T Consensus 9 l~~k~vlVTGas~gI-G~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~ 84 (264)
T 3ucx_A 9 LTDKVVVISGVGPAL-GTTLARRCAE--QGADLVLAARTVERLEDVAKQVTDT-GRRALSVGTDITDDAQVAHLVDETMK 84 (264)
T ss_dssp TTTCEEEEESCCTTH-HHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCcEEEEECCCcHH-HHHHHHHHHH--CcCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 456899999998774 5666655543 4779999999999999998888887 7778888887532 12 2
Q ss_pred CCCCccEEEEeCC
Q 027409 110 ELKGVDFLVVDCT 122 (223)
Q Consensus 110 ~L~~fDfVFIDa~ 122 (223)
++++.|.++.-|.
T Consensus 85 ~~g~id~lv~nAg 97 (264)
T 3ucx_A 85 AYGRVDVVINNAF 97 (264)
T ss_dssp HTSCCSEEEECCC
T ss_pred HcCCCcEEEECCC
Confidence 2357999998873
No 388
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=90.04 E-value=0.72 Score=34.75 Aligned_cols=63 Identities=11% Similarity=0.037 Sum_probs=47.6
Q ss_pred EEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--C--CccEEEEeCCCc--ccHHHHHHhc
Q 027409 71 RHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--K--GVDFLVVDCTSK--DFARVLRFAR 134 (223)
Q Consensus 71 ~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~--~fDfVFIDa~K~--~Y~~~f~~~~ 134 (223)
+|.-+|.|+...+.-+..+++. |+.+.....++.+.+..+ . .+|+||+|..-. +-.++++.++
T Consensus 38 ~Ilivdd~~~~~~~l~~~L~~~-g~~v~~~~~~~~~al~~l~~~~~~~dliilD~~l~~~~g~~~~~~lr 106 (157)
T 3hzh_A 38 NVLIVDDSVFTVKQLTQIFTSE-GFNIIDTAADGEEAVIKYKNHYPNIDIVTLXITMPKMDGITCLSNIM 106 (157)
T ss_dssp EEEEECSCHHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHGGGCCEEEECSSCSSSCHHHHHHHHH
T ss_pred EEEEEeCCHHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHHhcCCCCCEEEEeccCCCccHHHHHHHHH
Confidence 7999999999999999999998 998543667777666654 2 699999998633 3345555554
No 389
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=89.97 E-value=0.65 Score=36.52 Aligned_cols=91 Identities=15% Similarity=0.048 Sum_probs=55.7
Q ss_pred CeEEEEccCcchHHHHHHHHHhcCCC-CcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchH--HHhcC---CCCccE
Q 027409 43 KLIVEAWTHGGPITTSIGLAIAARHT-CARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAE--EVMGE---LKGVDF 116 (223)
Q Consensus 43 k~ILEIGT~~Gys~Stl~la~A~~~~-~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~--evL~~---L~~fDf 116 (223)
.+|+=+|+ |..+..++ ...... +-.|+-+|.|++..+.++ +. |. +++.||+. +.|.+ +..+|+
T Consensus 40 ~~v~IiG~--G~~G~~~a--~~L~~~~g~~V~vid~~~~~~~~~~----~~-g~--~~~~gd~~~~~~l~~~~~~~~ad~ 108 (183)
T 3c85_A 40 AQVLILGM--GRIGTGAY--DELRARYGKISLGIEIREEAAQQHR----SE-GR--NVISGDATDPDFWERILDTGHVKL 108 (183)
T ss_dssp CSEEEECC--SHHHHHHH--HHHHHHHCSCEEEEESCHHHHHHHH----HT-TC--CEEECCTTCHHHHHTBCSCCCCCE
T ss_pred CcEEEECC--CHHHHHHH--HHHHhccCCeEEEEECCHHHHHHHH----HC-CC--CEEEcCCCCHHHHHhccCCCCCCE
Confidence 47998986 55445443 333333 457999999998766544 34 54 56778874 45654 457999
Q ss_pred EEEeCCCcc-cHHHHHHhccCCCceEEEE
Q 027409 117 LVVDCTSKD-FARVLRFARFSNKGAVLAF 144 (223)
Q Consensus 117 VFIDa~K~~-Y~~~f~~~~~l~~GgvIV~ 144 (223)
|++=..... .......++.+.+...|++
T Consensus 109 vi~~~~~~~~~~~~~~~~~~~~~~~~ii~ 137 (183)
T 3c85_A 109 VLLAMPHHQGNQTALEQLQRRNYKGQIAA 137 (183)
T ss_dssp EEECCSSHHHHHHHHHHHHHTTCCSEEEE
T ss_pred EEEeCCChHHHHHHHHHHHHHCCCCEEEE
Confidence 998543222 2233345566665666665
No 390
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=89.96 E-value=1.5 Score=37.43 Aligned_cols=78 Identities=13% Similarity=0.087 Sum_probs=58.3
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHH----------HhcC
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEE----------VMGE 110 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~e----------vL~~ 110 (223)
+=|.+|=-|.+.|. +.+++.+.|. .+++|+.++++++..+...+.++.. |.++..+..|..+ ++.+
T Consensus 6 ~gKvalVTGas~GI-G~aiA~~la~--~Ga~Vv~~~~~~~~~~~~~~~i~~~-g~~~~~~~~Dvt~~~~v~~~~~~~~~~ 81 (254)
T 4fn4_A 6 KNKVVIVTGAGSGI-GRAIAKKFAL--NDSIVVAVELLEDRLNQIVQELRGM-GKEVLGVKADVSKKKDVEEFVRRTFET 81 (254)
T ss_dssp TTCEEEEETTTSHH-HHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHH-HHHHHHHHHH--cCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 45778888888884 5666665553 4789999999999999999999988 8777777777531 2223
Q ss_pred CCCccEEEEeCC
Q 027409 111 LKGVDFLVVDCT 122 (223)
Q Consensus 111 L~~fDfVFIDa~ 122 (223)
+++.|.++.-|.
T Consensus 82 ~G~iDiLVNNAG 93 (254)
T 4fn4_A 82 YSRIDVLCNNAG 93 (254)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCc
Confidence 357999887764
No 391
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=89.96 E-value=0.36 Score=44.06 Aligned_cols=95 Identities=14% Similarity=0.168 Sum_probs=59.1
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecch-------------
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQA------------- 104 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA------------- 104 (223)
..-++||=+|.+.|.+..++.+|.+. +.+++.++.++++.+.+++ . |.. |.....|.
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~---Ga~vi~~~~~~~~~~~~~~----l-Ga~~vi~~~~~d~~~~~~~~~~~~~~ 298 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAG---GANPICVVSSPQKAEICRA----M-GAEAIIDRNAEGYRFWKDENTQDPKE 298 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT---TCEEEEEESSHHHHHHHHH----H-TCCEEEETTTTTCCSEEETTEECHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHc---CCeEEEEECCHHHHHHHHh----h-CCcEEEecCcCcccccccccccchHH
Confidence 34568999998667655666776542 6788888899988887754 4 554 22211111
Q ss_pred ----HHHhcCC---CCccEEEEeCCCcccHHHHH-HhccCCCceEEEEeC
Q 027409 105 ----EEVMGEL---KGVDFLVVDCTSKDFARVLR-FARFSNKGAVLAFKN 146 (223)
Q Consensus 105 ----~evL~~L---~~fDfVFIDa~K~~Y~~~f~-~~~~l~~GgvIV~DN 146 (223)
.+.+.++ ..+|+|| |+.-. ..++ .+..+++||.+|.=-
T Consensus 299 ~~~~~~~i~~~t~g~g~Dvvi-d~~G~---~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 299 WKRFGKRIRELTGGEDIDIVF-EHPGR---ETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp HHHHHHHHHHHHTSCCEEEEE-ECSCH---HHHHHHHHHEEEEEEEEESC
T ss_pred HHHHHHHHHHHhCCCCCcEEE-EcCCc---hhHHHHHHHhhCCcEEEEEe
Confidence 1334333 3799775 66533 3454 456678889888643
No 392
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=89.89 E-value=2.5 Score=30.07 Aligned_cols=63 Identities=11% Similarity=0.114 Sum_probs=46.5
Q ss_pred cEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCccEEEEeCCCccc--HHHHHHhc
Q 027409 70 ARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVDFLVVDCTSKDF--ARVLRFAR 134 (223)
Q Consensus 70 g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fDfVFIDa~K~~Y--~~~f~~~~ 134 (223)
.+|.-+|.|+...+.-+..+++. |+.+. ...++.+.+..+ .++|+|++|..-... .++++.++
T Consensus 3 ~~ilivdd~~~~~~~l~~~L~~~-g~~v~-~~~~~~~al~~~~~~~~dlii~D~~~p~~~g~~~~~~lr 69 (120)
T 3f6p_A 3 KKILVVDDEKPIADILEFNLRKE-GYEVH-CAHDGNEAVEMVEELQPDLILLDIMLPNKDGVEVCREVR 69 (120)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHT-TCEEE-EESSHHHHHHHHHTTCCSEEEEETTSTTTHHHHHHHHHH
T ss_pred CeEEEEECCHHHHHHHHHHHHhC-CEEEE-EeCCHHHHHHHHhhCCCCEEEEeCCCCCCCHHHHHHHHH
Confidence 47899999999999999999998 99854 356777766654 379999999874443 33444443
No 393
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=89.78 E-value=3.8 Score=35.18 Aligned_cols=94 Identities=7% Similarity=0.017 Sum_probs=59.3
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceE---------E--EEecchHHHhc
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVS---------E--VIVRQAEEVMG 109 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I---------~--li~GdA~evL~ 109 (223)
+..+|.=||+| ..++.++...+. .+-.|+-++++++..+..++.. |+.+ . ....|..+.+
T Consensus 3 ~~mki~iiG~G--~~G~~~a~~L~~--~g~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~- 73 (359)
T 1bg6_A 3 ESKTYAVLGLG--NGGHAFAAYLAL--KGQSVLAWDIDAQRIKEIQDRG----AIIAEGPGLAGTAHPDLLTSDIGLAV- 73 (359)
T ss_dssp -CCEEEEECCS--HHHHHHHHHHHH--TTCEEEEECSCHHHHHHHHHHT----SEEEESSSCCEEECCSEEESCHHHHH-
T ss_pred CcCeEEEECCC--HHHHHHHHHHHh--CCCEEEEEeCCHHHHHHHHhcC----CeEEeccccccccccceecCCHHHHH-
Confidence 34689999984 555665544332 2457999999988776655432 2111 1 1234444444
Q ss_pred CCCCccEEEEeCCCcccHHHHHHhcc-CCCceEEEEe
Q 027409 110 ELKGVDFLVVDCTSKDFARVLRFARF-SNKGAVLAFK 145 (223)
Q Consensus 110 ~L~~fDfVFIDa~K~~Y~~~f~~~~~-l~~GgvIV~D 145 (223)
..+|+||+=....+..+.++.+.+ +++|.+||..
T Consensus 74 --~~~D~vi~~v~~~~~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 74 --KDADVILIVVPAIHHASIAANIASYISEGQLIILN 108 (359)
T ss_dssp --TTCSEEEECSCGGGHHHHHHHHGGGCCTTCEEEES
T ss_pred --hcCCEEEEeCCchHHHHHHHHHHHhCCCCCEEEEc
Confidence 369999997766666777776654 5888888776
No 394
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=89.75 E-value=1.5 Score=32.50 Aligned_cols=69 Identities=19% Similarity=0.013 Sum_probs=49.8
Q ss_pred CCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEecchHHHhcCC--CCccEEEEeCCCc--ccHHHHHHhccC
Q 027409 67 HTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVRQAEEVMGEL--KGVDFLVVDCTSK--DFARVLRFARFS 136 (223)
Q Consensus 67 ~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~GdA~evL~~L--~~fDfVFIDa~K~--~Y~~~f~~~~~l 136 (223)
.+..+|.-+|.|+...+.-+..+++. |.. +-....++.+.+..+ ..+|+||+|..-. +-.++++.++..
T Consensus 13 ~~~~~iLivdd~~~~~~~l~~~L~~~-~~~~~v~~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~ 86 (152)
T 3eul_A 13 PEKVRVVVGDDHPLFREGVVRALSLS-GSVNVVGEADDGAAALELIKAHLPDVALLDYRMPGMDGAQVAAAVRSY 86 (152)
T ss_dssp -CCEEEEEECSSHHHHHHHHHHHHHH-SSEEEEEEESSHHHHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHT
T ss_pred CceEEEEEEcCCHHHHHHHHHHHhhC-CCeEEEEEeCCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhc
Confidence 34578999999999999999999998 854 333567777766655 3799999997633 335556655433
No 395
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=89.67 E-value=1.1 Score=39.25 Aligned_cols=97 Identities=12% Similarity=0.139 Sum_probs=54.3
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcE-EEEEeCCchHHHHHHHHHHhhcCceEEEEecch--HHHhcCC----C
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCAR-HVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQA--EEVMGEL----K 112 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~-i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA--~evL~~L----~ 112 (223)
..-++||=+|.+.|.+..++.+|++. +++ |++++.+++. +.-++..++. |.. .++..+. .+.+.++ .
T Consensus 166 ~~g~~VlV~Ga~G~vG~~aiqlak~~---Ga~vi~~~~~~~~~-~~~~~~~~~l-Ga~-~vi~~~~~~~~~~~~~~~~~~ 239 (357)
T 1zsy_A 166 QPGDSVIQNASNSGVGQAVIQIAAAL---GLRTINVVRDRPDI-QKLSDRLKSL-GAE-HVITEEELRRPEMKNFFKDMP 239 (357)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHH---TCEEEEEECCCSCH-HHHHHHHHHT-TCS-EEEEHHHHHSGGGGGTTSSSC
T ss_pred CCCCEEEEeCCcCHHHHHHHHHHHHc---CCEEEEEecCccch-HHHHHHHHhc-CCc-EEEecCcchHHHHHHHHhCCC
Confidence 34478999998666655777777653 454 5666665542 2222334455 765 2222211 1222222 2
Q ss_pred CccEEEEeCCCcccHHHHHHhccCCCceEEEEe
Q 027409 113 GVDFLVVDCTSKDFARVLRFARFSNKGAVLAFK 145 (223)
Q Consensus 113 ~fDfVFIDa~K~~Y~~~f~~~~~l~~GgvIV~D 145 (223)
.+|+|| |+.-.. .....+..+++||.+|.=
T Consensus 240 ~~Dvvi-d~~g~~--~~~~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 240 QPRLAL-NCVGGK--SSTELLRQLARGGTMVTY 269 (357)
T ss_dssp CCSEEE-ESSCHH--HHHHHHTTSCTTCEEEEC
T ss_pred CceEEE-ECCCcH--HHHHHHHhhCCCCEEEEE
Confidence 499775 775432 234566778889988764
No 396
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=89.62 E-value=3.5 Score=35.28 Aligned_cols=77 Identities=14% Similarity=0.125 Sum_probs=43.4
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCc--eEEEEecchHHHhcCCCCccEEE
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGW--VSEVIVRQAEEVMGELKGVDFLV 118 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~--~I~li~GdA~evL~~L~~fDfVF 118 (223)
++.+|.=||+ |..+++++...+.....+.|+-+|+++++.+.....+.+...+ .+++...+-.+. +...|+||
T Consensus 6 ~~mkI~IiGa--G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~aD~Vi 80 (319)
T 1lld_A 6 KPTKLAVIGA--GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEI---CRDADMVV 80 (319)
T ss_dssp -CCEEEEECC--SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGG---GTTCSEEE
T ss_pred CCCEEEEECC--CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCHHH---hCCCCEEE
Confidence 4568999998 5556776665544322238999999987765222222221011 234444411232 35799999
Q ss_pred EeCC
Q 027409 119 VDCT 122 (223)
Q Consensus 119 IDa~ 122 (223)
+=..
T Consensus 81 i~v~ 84 (319)
T 1lld_A 81 ITAG 84 (319)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 9774
No 397
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=89.48 E-value=1.3 Score=30.96 Aligned_cols=62 Identities=15% Similarity=0.206 Sum_probs=45.9
Q ss_pred EEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCccEEEEeCCCcc--cHHHHHHhc
Q 027409 71 RHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVDFLVVDCTSKD--FARVLRFAR 134 (223)
Q Consensus 71 ~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fDfVFIDa~K~~--Y~~~f~~~~ 134 (223)
+|.-+|.++...+.-+..+++. |+.+. ...++.+.+..+ ..+|+||+|..-.. -.++++.++
T Consensus 3 ~ilivdd~~~~~~~l~~~l~~~-~~~v~-~~~~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~ 68 (116)
T 3a10_A 3 RILVVDDEPNIRELLKEELQEE-GYEID-TAENGEEALKKFFSGNYDLVILDIEMPGISGLEVAGEIR 68 (116)
T ss_dssp EEEEECSCHHHHHHHHHHHHHT-TCEEE-EESSHHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHH
T ss_pred EEEEEeCCHHHHHHHHHHHHHC-CCEEE-EeCCHHHHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHH
Confidence 6788999999999999999998 98855 566776666554 37999999986443 234455554
No 398
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=89.39 E-value=0.71 Score=33.22 Aligned_cols=63 Identities=11% Similarity=0.024 Sum_probs=46.6
Q ss_pred cEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCccEEEEeCCCcc--cHHHHHHhc
Q 027409 70 ARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVDFLVVDCTSKD--FARVLRFAR 134 (223)
Q Consensus 70 g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fDfVFIDa~K~~--Y~~~f~~~~ 134 (223)
.+|.-+|.|+...+.-+..+++. |+.+. ...++.+.+..+ ..+|+|++|..-.. =.++++.++
T Consensus 3 ~~ILivdd~~~~~~~l~~~l~~~-g~~v~-~~~~~~~al~~l~~~~~dlvllD~~~p~~~g~~~~~~l~ 69 (122)
T 3gl9_A 3 KKVLLVDDSAVLRKIVSFNLKKE-GYEVI-EAENGQIALEKLSEFTPDLIVLXIMMPVMDGFTVLKKLQ 69 (122)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHT-TCEEE-EESSHHHHHHHHTTBCCSEEEECSCCSSSCHHHHHHHHH
T ss_pred ceEEEEeCCHHHHHHHHHHHHHC-CcEEE-EeCCHHHHHHHHHhcCCCEEEEeccCCCCcHHHHHHHHH
Confidence 37889999999999999999998 99854 557777766654 37999999986333 234555443
No 399
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=89.37 E-value=0.83 Score=35.13 Aligned_cols=96 Identities=16% Similarity=0.073 Sum_probs=55.7
Q ss_pred hcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchH--HHhcC--CCCc
Q 027409 39 GWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAE--EVMGE--LKGV 114 (223)
Q Consensus 39 ~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~--evL~~--L~~f 114 (223)
....++|+=+|+ |..++.++.. ....+.+|+-+|++++..+.+++ +. |. .++.||+. +.|.. +..+
T Consensus 16 ~~~~~~v~IiG~--G~iG~~la~~--L~~~g~~V~vid~~~~~~~~~~~---~~-g~--~~~~~d~~~~~~l~~~~~~~a 85 (155)
T 2g1u_A 16 KQKSKYIVIFGC--GRLGSLIANL--ASSSGHSVVVVDKNEYAFHRLNS---EF-SG--FTVVGDAAEFETLKECGMEKA 85 (155)
T ss_dssp -CCCCEEEEECC--SHHHHHHHHH--HHHTTCEEEEEESCGGGGGGSCT---TC-CS--EEEESCTTSHHHHHTTTGGGC
T ss_pred ccCCCcEEEECC--CHHHHHHHHH--HHhCCCeEEEEECCHHHHHHHHh---cC-CC--cEEEecCCCHHHHHHcCcccC
Confidence 345678999996 5645554433 33345689999999987654331 33 44 46668763 45554 3579
Q ss_pred cEEEEeCCCcccHHHH-HHhccCCCceEEEE
Q 027409 115 DFLVVDCTSKDFARVL-RFARFSNKGAVLAF 144 (223)
Q Consensus 115 DfVFIDa~K~~Y~~~f-~~~~~l~~GgvIV~ 144 (223)
|+||+=.......... ..++.+.+...|++
T Consensus 86 d~Vi~~~~~~~~~~~~~~~~~~~~~~~~iv~ 116 (155)
T 2g1u_A 86 DMVFAFTNDDSTNFFISMNARYMFNVENVIA 116 (155)
T ss_dssp SEEEECSSCHHHHHHHHHHHHHTSCCSEEEE
T ss_pred CEEEEEeCCcHHHHHHHHHHHHHCCCCeEEE
Confidence 9998866543333332 23444444444544
No 400
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=89.32 E-value=2.4 Score=37.06 Aligned_cols=92 Identities=11% Similarity=0.096 Sum_probs=58.7
Q ss_pred CeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHH-HhcCCCCccEEEEeC
Q 027409 43 KLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEE-VMGELKGVDFLVVDC 121 (223)
Q Consensus 43 k~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~e-vL~~L~~fDfVFIDa 121 (223)
++|.=||+ |..+.+++.+........+|+-+|++++..+.++ +. |.. .-...+..+ .+ ...|+||+=.
T Consensus 34 ~kI~IIG~--G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~----~~-G~~-~~~~~~~~~~~~---~~aDvVilav 102 (314)
T 3ggo_A 34 QNVLIVGV--GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV----DL-GII-DEGTTSIAKVED---FSPDFVMLSS 102 (314)
T ss_dssp SEEEEESC--SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH----HT-TSC-SEEESCTTGGGG---GCCSEEEECS
T ss_pred CEEEEEee--CHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHH----HC-CCc-chhcCCHHHHhh---ccCCEEEEeC
Confidence 78999997 4566776655443322238999999998877664 34 552 112234333 33 3689999976
Q ss_pred CCcccHHHHHHhcc-CCCceEEEEeC
Q 027409 122 TSKDFARVLRFARF-SNKGAVLAFKN 146 (223)
Q Consensus 122 ~K~~Y~~~f~~~~~-l~~GgvIV~DN 146 (223)
-.....++++.+.+ +++|.+| +|.
T Consensus 103 p~~~~~~vl~~l~~~l~~~~iv-~d~ 127 (314)
T 3ggo_A 103 PVRTFREIAKKLSYILSEDATV-TDQ 127 (314)
T ss_dssp CGGGHHHHHHHHHHHSCTTCEE-EEC
T ss_pred CHHHHHHHHHHHhhccCCCcEE-EEC
Confidence 66666777776644 5777755 565
No 401
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=89.25 E-value=0.88 Score=39.53 Aligned_cols=97 Identities=15% Similarity=0.088 Sum_probs=61.5
Q ss_pred hcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCC-C--C
Q 027409 39 GWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGEL-K--G 113 (223)
Q Consensus 39 ~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L-~--~ 113 (223)
...-.+||=+|+ .|.+..++.+|++. .+.+|+.++.++++.+.|++ . |.. +.. ..+..+.+.++ + .
T Consensus 169 ~~~g~~vlv~Ga-G~vG~~a~qla~~~--g~~~Vi~~~~~~~~~~~~~~----l-Ga~~~i~~-~~~~~~~v~~~t~g~g 239 (345)
T 3jv7_A 169 LGPGSTAVVIGV-GGLGHVGIQILRAV--SAARVIAVDLDDDRLALARE----V-GADAAVKS-GAGAADAIRELTGGQG 239 (345)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHH--CCCEEEEEESCHHHHHHHHH----T-TCSEEEEC-STTHHHHHHHHHGGGC
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHc--CCCEEEEEcCCHHHHHHHHH----c-CCCEEEcC-CCcHHHHHHHHhCCCC
Confidence 345578999997 46555677777654 24689999999998887764 4 655 332 22445555544 2 7
Q ss_pred ccEEEEeCCCcccHHHHH-HhccCCCceEEEEeCC
Q 027409 114 VDFLVVDCTSKDFARVLR-FARFSNKGAVLAFKNA 147 (223)
Q Consensus 114 fDfVFIDa~K~~Y~~~f~-~~~~l~~GgvIV~DNv 147 (223)
+|+|| |+.-. ...++ .+..+++||.++.=..
T Consensus 240 ~d~v~-d~~G~--~~~~~~~~~~l~~~G~iv~~G~ 271 (345)
T 3jv7_A 240 ATAVF-DFVGA--QSTIDTAQQVVAVDGHISVVGI 271 (345)
T ss_dssp EEEEE-ESSCC--HHHHHHHHHHEEEEEEEEECSC
T ss_pred CeEEE-ECCCC--HHHHHHHHHHHhcCCEEEEECC
Confidence 99876 54322 33454 4456677888876443
No 402
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=89.24 E-value=1.1 Score=32.87 Aligned_cols=64 Identities=9% Similarity=0.024 Sum_probs=49.1
Q ss_pred CcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCccEEEEeCCCc--ccHHHHHHhc
Q 027409 69 CARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVDFLVVDCTSK--DFARVLRFAR 134 (223)
Q Consensus 69 ~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fDfVFIDa~K~--~Y~~~f~~~~ 134 (223)
..+|.-+|.|+...+.-+..+++. |+.|. ...++.+.+..+ ..+|+||+|..-. .-.++++.++
T Consensus 8 ~~~iLivd~~~~~~~~l~~~L~~~-g~~v~-~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~ 75 (147)
T 2zay_A 8 WWRIMLVDTQLPALAASISALSQE-GFDII-QCGNAIEAVPVAVKTHPHLIITEANMPKISGMDLFNSLK 75 (147)
T ss_dssp CEEEEEECTTGGGGHHHHHHHHHH-TEEEE-EESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHH
T ss_pred CceEEEEeCCHHHHHHHHHHHHHc-CCeEE-EeCCHHHHHHHHHcCCCCEEEEcCCCCCCCHHHHHHHHH
Confidence 468999999999999999999998 99855 567777766655 3799999998643 3345555554
No 403
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=89.18 E-value=3.3 Score=37.07 Aligned_cols=76 Identities=9% Similarity=0.082 Sum_probs=49.3
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce---EEEEecchHHHhcCCCCccEE
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV---SEVIVRQAEEVMGELKGVDFL 117 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~---I~li~GdA~evL~~L~~fDfV 117 (223)
+.++|.=||++ |+.+++++.+.+.......|+.+|+++++.+.-...+.+. ... +++ .+|-.+.+. .-|+|
T Consensus 7 ~~~KV~ViGaa-G~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~-~~~~~~i~~-t~d~~~al~---dADvV 80 (343)
T 3fi9_A 7 TEEKLTIVGAA-GMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHC-GFEGLNLTF-TSDIKEALT---DAKYI 80 (343)
T ss_dssp CSSEEEEETTT-SHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHH-CCTTCCCEE-ESCHHHHHT---TEEEE
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhC-cCCCCceEE-cCCHHHHhC---CCCEE
Confidence 45689999985 4456777655554433347999999998776555556665 322 443 345445454 68999
Q ss_pred EEeCC
Q 027409 118 VVDCT 122 (223)
Q Consensus 118 FIDa~ 122 (223)
|+=|.
T Consensus 81 vitaG 85 (343)
T 3fi9_A 81 VSSGG 85 (343)
T ss_dssp EECCC
T ss_pred EEccC
Confidence 99875
No 404
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=89.18 E-value=3.6 Score=36.48 Aligned_cols=77 Identities=12% Similarity=0.065 Sum_probs=51.9
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcC---ceEEEEecchHHHhcCCCCccE
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVG---WVSEVIVRQAEEVMGELKGVDF 116 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G---~~I~li~GdA~evL~~L~~fDf 116 (223)
.++.+|.=||+ |+.+++++.+.+..+--+.|+.+|+++++.+.-...+.+.+. ..+++..+|. + .+..-|+
T Consensus 3 ~~~~kI~ViGa--G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~-~---a~~~aDv 76 (326)
T 3pqe_A 3 KHVNKVALIGA--GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTY-E---DCKDADI 76 (326)
T ss_dssp CSCCEEEEECC--SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECG-G---GGTTCSE
T ss_pred CCCCEEEEECC--CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcH-H---HhCCCCE
Confidence 35678999995 677888877666543335899999999877654444554311 2266666664 2 2457899
Q ss_pred EEEeCC
Q 027409 117 LVVDCT 122 (223)
Q Consensus 117 VFIDa~ 122 (223)
|||=+.
T Consensus 77 Vvi~ag 82 (326)
T 3pqe_A 77 VCICAG 82 (326)
T ss_dssp EEECCS
T ss_pred EEEecc
Confidence 999874
No 405
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=89.14 E-value=1.4 Score=31.82 Aligned_cols=63 Identities=16% Similarity=0.100 Sum_probs=47.1
Q ss_pred cEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCccEEEEeCCCcc--cHHHHHHhc
Q 027409 70 ARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVDFLVVDCTSKD--FARVLRFAR 134 (223)
Q Consensus 70 g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fDfVFIDa~K~~--Y~~~f~~~~ 134 (223)
.+|.-+|.|+...+.-+..++.. |+.+. ...++.+.+..+ ..+|+|++|..-.. -.++++.++
T Consensus 4 ~~Ilivdd~~~~~~~l~~~L~~~-g~~v~-~~~~~~~al~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~ 70 (132)
T 3crn_A 4 KRILIVDDDTAILDSTKQILEFE-GYEVE-IAATAGEGLAKIENEFFNLALFXIKLPDMEGTELLEKAH 70 (132)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHT-TCEEE-EESSHHHHHHHHHHSCCSEEEECSBCSSSBHHHHHHHHH
T ss_pred cEEEEEeCCHHHHHHHHHHHHHC-CceEE-EeCCHHHHHHHHhcCCCCEEEEecCCCCCchHHHHHHHH
Confidence 47899999999999999999998 98855 567777766654 37999999976432 344555554
No 406
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=89.12 E-value=2.2 Score=37.08 Aligned_cols=93 Identities=14% Similarity=0.133 Sum_probs=59.0
Q ss_pred HhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCCCCccEE
Q 027409 38 AGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGELKGVDFL 117 (223)
Q Consensus 38 ~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L~~fDfV 117 (223)
+...-++||-+|++ |.+..++.+|++. +.+|+.++.++++.+.|++ . |.. .++ .+. +.+.+ .+|+|
T Consensus 173 ~~~~g~~VlV~GaG-~vG~~a~qla~~~---Ga~Vi~~~~~~~~~~~~~~----l-Ga~-~v~-~~~-~~~~~--~~D~v 238 (348)
T 3two_A 173 KVTKGTKVGVAGFG-GLGSMAVKYAVAM---GAEVSVFARNEHKKQDALS----M-GVK-HFY-TDP-KQCKE--ELDFI 238 (348)
T ss_dssp TCCTTCEEEEESCS-HHHHHHHHHHHHT---TCEEEEECSSSTTHHHHHH----T-TCS-EEE-SSG-GGCCS--CEEEE
T ss_pred CCCCCCEEEEECCc-HHHHHHHHHHHHC---CCeEEEEeCCHHHHHHHHh----c-CCC-eec-CCH-HHHhc--CCCEE
Confidence 34456789999974 5544666676543 6799999999999887764 4 665 222 343 23333 79988
Q ss_pred EEeCCCcccHHHHH-HhccCCCceEEEEeCC
Q 027409 118 VVDCTSKDFARVLR-FARFSNKGAVLAFKNA 147 (223)
Q Consensus 118 FIDa~K~~Y~~~f~-~~~~l~~GgvIV~DNv 147 (223)
| |+.-.. ..++ .+..+++||.++.=..
T Consensus 239 i-d~~g~~--~~~~~~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 239 I-STIPTH--YDLKDYLKLLTYNGDLALVGL 266 (348)
T ss_dssp E-ECCCSC--CCHHHHHTTEEEEEEEEECCC
T ss_pred E-ECCCcH--HHHHHHHHHHhcCCEEEEECC
Confidence 7 554332 1233 4466688888886433
No 407
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=89.07 E-value=1 Score=38.06 Aligned_cols=49 Identities=10% Similarity=0.049 Sum_probs=35.4
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCc
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGW 95 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~ 95 (223)
..-..||+..||.|. .+++ | ...+-+.+.+|++++..+.|+++++.. ++
T Consensus 211 ~~~~~vlD~f~GsGt--t~~~-a---~~~gr~~ig~e~~~~~~~~~~~r~~~~-~~ 259 (260)
T 1g60_A 211 NPNDLVLDCFMGSGT--TAIV-A---KKLGRNFIGCDMNAEYVNQANFVLNQL-EI 259 (260)
T ss_dssp CTTCEEEESSCTTCH--HHHH-H---HHTTCEEEEEESCHHHHHHHHHHHHC----
T ss_pred CCCCEEEECCCCCCH--HHHH-H---HHcCCeEEEEeCCHHHHHHHHHHHHhc-cC
Confidence 345689999999884 3322 2 123568999999999999999999987 54
No 408
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=89.06 E-value=1.8 Score=31.56 Aligned_cols=66 Identities=9% Similarity=0.035 Sum_probs=48.5
Q ss_pred CcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEecchHHHhcCC--CCccEEEEeCCCcc--cHHHHHHhcc
Q 027409 69 CARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVRQAEEVMGEL--KGVDFLVVDCTSKD--FARVLRFARF 135 (223)
Q Consensus 69 ~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~GdA~evL~~L--~~fDfVFIDa~K~~--Y~~~f~~~~~ 135 (223)
.-+|.-+|.|+...+.-+..+++. |.. .-....++.+.+..+ .++|+||+|..-.. -.++++.++.
T Consensus 5 ~~~ILivdd~~~~~~~l~~~L~~~-~~~~~v~~~~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~ 75 (144)
T 3kht_A 5 SKRVLVVEDNPDDIALIRRVLDRK-DIHCQLEFVDNGAKALYQVQQAKYDLIILDIGLPIANGFEVMSAVRK 75 (144)
T ss_dssp CEEEEEECCCHHHHHHHHHHHHHT-TCCEEEEEESSHHHHHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHS
T ss_pred CCEEEEEeCCHHHHHHHHHHHHhc-CCCeeEEEECCHHHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHh
Confidence 358999999999999999999998 887 334556666666554 37999999986433 3455555543
No 409
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=88.94 E-value=4.1 Score=35.54 Aligned_cols=80 Identities=11% Similarity=0.086 Sum_probs=50.9
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhh---cCceEEEEecchHHHhcCCCCccE
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDV---VGWVSEVIVRQAEEVMGELKGVDF 116 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a---~G~~I~li~GdA~evL~~L~~fDf 116 (223)
.++++|.=||+ |..+++++++.+.....+.|+-+|+|+++.+.-..-+.++ .+..+++..++. + .+..-|+
T Consensus 4 ~~~~kI~IIGa--G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~-~---al~~aDv 77 (316)
T 1ldn_A 4 NGGARVVVIGA--GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY-D---DCRDADL 77 (316)
T ss_dssp TTSCEEEEECC--SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG-G---GTTTCSE
T ss_pred CCCCEEEEECc--CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcH-H---HhCCCCE
Confidence 35678999997 5567888777655443468999999998655422334433 111355555442 2 3557999
Q ss_pred EEEeCCCcc
Q 027409 117 LVVDCTSKD 125 (223)
Q Consensus 117 VFIDa~K~~ 125 (223)
|++=+...+
T Consensus 78 Viia~~~~~ 86 (316)
T 1ldn_A 78 VVICAGANQ 86 (316)
T ss_dssp EEECCSCCC
T ss_pred EEEcCCCCC
Confidence 999865443
No 410
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=88.92 E-value=0.89 Score=42.97 Aligned_cols=93 Identities=8% Similarity=0.004 Sum_probs=66.4
Q ss_pred CcHHHHHHHHHHHHhcCCCeEEEEccCcchHHHHHHHHHhcCCC-----------CcEEEEEeCCchHHHHHHHHHHhhc
Q 027409 25 KESGVAELLSAMAAGWNAKLIVEAWTHGGPITTSIGLAIAARHT-----------CARHVCIVPDERSRLAYVKAMYDVV 93 (223)
Q Consensus 25 i~p~~g~fL~~L~~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~-----------~g~i~TIE~d~e~~~~Ar~~~~~a~ 93 (223)
-++++.+|+.-++.-..-.+|++-.||+|- .-+..+...... ...++.+|+|+..+..|+-|+.-.
T Consensus 201 TP~~Vv~lmv~l~~p~~~~~I~DPacGsGg--fL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lh- 277 (530)
T 3ufb_A 201 TPRPVVRFMVEVMDPQLGESVLDPACGTGG--FLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLH- 277 (530)
T ss_dssp CCHHHHHHHHHHHCCCTTCCEEETTCTTTH--HHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHH-
T ss_pred CcHHHHHHHHHhhccCCCCEEEeCCCCcch--HHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhc-
Confidence 355688888887776666799999999984 222222111111 246999999999999999998877
Q ss_pred Cce-EEEEecchHHH-hcCC---CCccEEEEe
Q 027409 94 GWV-SEVIVRQAEEV-MGEL---KGVDFLVVD 120 (223)
Q Consensus 94 G~~-I~li~GdA~ev-L~~L---~~fDfVFID 120 (223)
|.. -.+..||++.. +... ..||+|+-.
T Consensus 278 g~~~~~I~~~dtL~~~~~~~~~~~~fD~Il~N 309 (530)
T 3ufb_A 278 GLEYPRIDPENSLRFPLREMGDKDRVDVILTN 309 (530)
T ss_dssp TCSCCEEECSCTTCSCGGGCCGGGCBSEEEEC
T ss_pred CCccccccccccccCchhhhcccccceEEEec
Confidence 877 78889998752 2222 369999975
No 411
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=88.80 E-value=0.59 Score=42.05 Aligned_cols=95 Identities=12% Similarity=-0.014 Sum_probs=52.8
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcC-CCCccEEE
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGE-LKGVDFLV 118 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~-L~~fDfVF 118 (223)
...++|+=||+| -.+..++. .+..-+.+|+.+|+++++.+.+++.+ |..+.....+..+ +.+ +...|+|+
T Consensus 166 l~g~~V~ViG~G--~iG~~~a~--~a~~~Ga~V~~~d~~~~~l~~~~~~~----g~~~~~~~~~~~~-l~~~l~~aDvVi 236 (377)
T 2vhw_A 166 VEPADVVVIGAG--TAGYNAAR--IANGMGATVTVLDINIDKLRQLDAEF----CGRIHTRYSSAYE-LEGAVKRADLVI 236 (377)
T ss_dssp BCCCEEEEECCS--HHHHHHHH--HHHHTTCEEEEEESCHHHHHHHHHHT----TTSSEEEECCHHH-HHHHHHHCSEEE
T ss_pred CCCCEEEEECCC--HHHHHHHH--HHHhCCCEEEEEeCCHHHHHHHHHhc----CCeeEeccCCHHH-HHHHHcCCCEEE
Confidence 568999999984 33444332 22234679999999998877766433 3332222222211 222 24689988
Q ss_pred EeCC-Cc-ccHHH-H-HHhccCCCceEEE
Q 027409 119 VDCT-SK-DFARV-L-RFARFSNKGAVLA 143 (223)
Q Consensus 119 IDa~-K~-~Y~~~-f-~~~~~l~~GgvIV 143 (223)
.=+- .. ..+.+ . +.+..+++||+||
T Consensus 237 ~~~~~p~~~t~~li~~~~l~~mk~g~~iV 265 (377)
T 2vhw_A 237 GAVLVPGAKAPKLVSNSLVAHMKPGAVLV 265 (377)
T ss_dssp ECCCCTTSCCCCCBCHHHHTTSCTTCEEE
T ss_pred ECCCcCCCCCcceecHHHHhcCCCCcEEE
Confidence 7321 11 12222 2 2445668888876
No 412
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=88.78 E-value=1.3 Score=31.44 Aligned_cols=68 Identities=15% Similarity=0.079 Sum_probs=43.1
Q ss_pred CeEEEEccCcchHHHHHHHHHhcCCCC-cEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchH--HHhcC-CCCccEEE
Q 027409 43 KLIVEAWTHGGPITTSIGLAIAARHTC-ARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAE--EVMGE-LKGVDFLV 118 (223)
Q Consensus 43 k~ILEIGT~~Gys~Stl~la~A~~~~~-g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~--evL~~-L~~fDfVF 118 (223)
++|+=+|+ |+.++.++..... .+ -+|+.++++++..+..+ .. |. +++.+|.. +.+.+ +..+|.||
T Consensus 6 ~~v~I~G~--G~iG~~~~~~l~~--~g~~~v~~~~r~~~~~~~~~----~~-~~--~~~~~d~~~~~~~~~~~~~~d~vi 74 (118)
T 3ic5_A 6 WNICVVGA--GKIGQMIAALLKT--SSNYSVTVADHDLAALAVLN----RM-GV--ATKQVDAKDEAGLAKALGGFDAVI 74 (118)
T ss_dssp EEEEEECC--SHHHHHHHHHHHH--CSSEEEEEEESCHHHHHHHH----TT-TC--EEEECCTTCHHHHHHHTTTCSEEE
T ss_pred CeEEEECC--CHHHHHHHHHHHh--CCCceEEEEeCCHHHHHHHH----hC-CC--cEEEecCCCHHHHHHHHcCCCEEE
Confidence 58999998 6666665544332 34 57999999998766554 34 44 44555543 23332 46799988
Q ss_pred EeC
Q 027409 119 VDC 121 (223)
Q Consensus 119 IDa 121 (223)
.=+
T Consensus 75 ~~~ 77 (118)
T 3ic5_A 75 SAA 77 (118)
T ss_dssp ECS
T ss_pred ECC
Confidence 655
No 413
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=88.68 E-value=0.86 Score=39.67 Aligned_cols=94 Identities=12% Similarity=0.095 Sum_probs=58.3
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEe----cchHHHhcCCCCccE
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIV----RQAEEVMGELKGVDF 116 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~----GdA~evL~~L~~fDf 116 (223)
.-++||-+|. .|.+..++.+|++.. ++.+|+.++.++++.+.+++ . |.. .++. .|..+.+..-..+|+
T Consensus 170 ~g~~VlV~Ga-G~vG~~aiqlak~~~-~Ga~Vi~~~~~~~~~~~~~~----l-Ga~-~vi~~~~~~~~~~~~~~g~g~D~ 241 (344)
T 2h6e_A 170 AEPVVIVNGI-GGLAVYTIQILKALM-KNITIVGISRSKKHRDFALE----L-GAD-YVSEMKDAESLINKLTDGLGASI 241 (344)
T ss_dssp SSCEEEEECC-SHHHHHHHHHHHHHC-TTCEEEEECSCHHHHHHHHH----H-TCS-EEECHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHhc-CCCEEEEEeCCHHHHHHHHH----h-CCC-EEeccccchHHHHHhhcCCCccE
Confidence 5589999998 466556667776531 25789999999998887765 4 543 2222 222223332127998
Q ss_pred EEEeCCCcccHHHHH-HhccCCCceEEEEe
Q 027409 117 LVVDCTSKDFARVLR-FARFSNKGAVLAFK 145 (223)
Q Consensus 117 VFIDa~K~~Y~~~f~-~~~~l~~GgvIV~D 145 (223)
|| |+.-. ...++ .+..+++||.+|.=
T Consensus 242 vi-d~~g~--~~~~~~~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 242 AI-DLVGT--EETTYNLGKLLAQEGAIILV 268 (344)
T ss_dssp EE-ESSCC--HHHHHHHHHHEEEEEEEEEC
T ss_pred EE-ECCCC--hHHHHHHHHHhhcCCEEEEe
Confidence 86 55422 33444 44666788888763
No 414
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=88.68 E-value=3.2 Score=30.22 Aligned_cols=91 Identities=12% Similarity=0.130 Sum_probs=53.6
Q ss_pred CeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchH--HHhcC--CCCccEEE
Q 027409 43 KLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAE--EVMGE--LKGVDFLV 118 (223)
Q Consensus 43 k~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~--evL~~--L~~fDfVF 118 (223)
.+|+=+|+ |..++.++.... ..+-.|+-+|++++..+..++ +. | ++++.||+. +.+.. +..+|+||
T Consensus 5 m~i~IiG~--G~iG~~~a~~L~--~~g~~v~~~d~~~~~~~~~~~---~~-~--~~~~~~d~~~~~~l~~~~~~~~d~vi 74 (140)
T 1lss_A 5 MYIIIAGI--GRVGYTLAKSLS--EKGHDIVLIDIDKDICKKASA---EI-D--ALVINGDCTKIKTLEDAGIEDADMYI 74 (140)
T ss_dssp CEEEEECC--SHHHHHHHHHHH--HTTCEEEEEESCHHHHHHHHH---HC-S--SEEEESCTTSHHHHHHTTTTTCSEEE
T ss_pred CEEEEECC--CHHHHHHHHHHH--hCCCeEEEEECCHHHHHHHHH---hc-C--cEEEEcCCCCHHHHHHcCcccCCEEE
Confidence 47888886 665555544332 335689999999886654432 23 4 356778763 34432 46799999
Q ss_pred EeCCCcccHHHH-HHhccCCCceEEE
Q 027409 119 VDCTSKDFARVL-RFARFSNKGAVLA 143 (223)
Q Consensus 119 IDa~K~~Y~~~f-~~~~~l~~GgvIV 143 (223)
+=.........+ ..++.++++-+|+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~ii~ 100 (140)
T 1lss_A 75 AVTGKEEVNLMSSLLAKSYGINKTIA 100 (140)
T ss_dssp ECCSCHHHHHHHHHHHHHTTCCCEEE
T ss_pred EeeCCchHHHHHHHHHHHcCCCEEEE
Confidence 876443332222 3444455555554
No 415
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=88.62 E-value=2.1 Score=36.01 Aligned_cols=79 Identities=15% Similarity=0.149 Sum_probs=56.5
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHH----------Hhc
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEE----------VMG 109 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~e----------vL~ 109 (223)
.+-|.||=.|.+.| ++.+++...+. .+.+|+.++++++..+...+.++.. |..+.++.+|..+ +..
T Consensus 20 l~~k~vlVTGas~g-IG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~ 95 (277)
T 2rhc_B 20 QDSEVALVTGATSG-IGLEIARRLGK--EGLRVFVCARGEEGLRTTLKELREA-GVEADGRTCDVRSVPEIEALVAAVVE 95 (277)
T ss_dssp TTSCEEEEETCSSH-HHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCH-HHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEECCCCCHHHHHHHHHHHHH
Confidence 34588999998866 45666555443 4678999999999888877778776 7667788887532 122
Q ss_pred CCCCccEEEEeCC
Q 027409 110 ELKGVDFLVVDCT 122 (223)
Q Consensus 110 ~L~~fDfVFIDa~ 122 (223)
.++++|.++.-|.
T Consensus 96 ~~g~iD~lv~~Ag 108 (277)
T 2rhc_B 96 RYGPVDVLVNNAG 108 (277)
T ss_dssp HTCSCSEEEECCC
T ss_pred HhCCCCEEEECCC
Confidence 2357999988775
No 416
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=88.58 E-value=1.3 Score=31.09 Aligned_cols=73 Identities=7% Similarity=0.088 Sum_probs=51.8
Q ss_pred cEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCccEEEEeCCCc---ccHHHHHHhccC---CCceE
Q 027409 70 ARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVDFLVVDCTSK---DFARVLRFARFS---NKGAV 141 (223)
Q Consensus 70 g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fDfVFIDa~K~---~Y~~~f~~~~~l---~~Ggv 141 (223)
-+|.-+|.|+...+.-+..+++. |+.+. ...++.+.+..+ ..+|+|++|..-. .-.++++.++.. +.--+
T Consensus 6 ~~ilivdd~~~~~~~l~~~L~~~-g~~v~-~~~~~~~a~~~~~~~~~dlvi~d~~~~~~~~g~~~~~~l~~~~~~~~~~i 83 (127)
T 2gkg_A 6 KKILIVESDTALSATLRSALEGR-GFTVD-ETTDGKGSVEQIRRDRPDLVVLAVDLSAGQNGYLICGKLKKDDDLKNVPI 83 (127)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHH-TCEEE-EECCHHHHHHHHHHHCCSEEEEESBCGGGCBHHHHHHHHHHSTTTTTSCE
T ss_pred CeEEEEeCCHHHHHHHHHHHHhc-CceEE-EecCHHHHHHHHHhcCCCEEEEeCCCCCCCCHHHHHHHHhcCccccCCCE
Confidence 47999999999999999999998 99854 556666666554 3799999998644 334556655422 33345
Q ss_pred EEE
Q 027409 142 LAF 144 (223)
Q Consensus 142 IV~ 144 (223)
|+.
T Consensus 84 i~~ 86 (127)
T 2gkg_A 84 VII 86 (127)
T ss_dssp EEE
T ss_pred EEE
Confidence 555
No 417
>3cwq_A Para family chromosome partitioning protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: ADP; 2.47A {Synechocystis SP}
Probab=88.50 E-value=0.96 Score=36.73 Aligned_cols=68 Identities=13% Similarity=0.035 Sum_probs=41.0
Q ss_pred CcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCCCCccEEEEeCCCc
Q 027409 51 HGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGELKGVDFLVVDCTSK 124 (223)
Q Consensus 51 ~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L~~fDfVFIDa~K~ 124 (223)
|.|=++.++.||.+....+ ++.-||.|++. -+...+... .+..+++.++.++.+. +.||+|+||+...
T Consensus 11 GvGKTT~a~~LA~~la~~g-~VlliD~D~q~--~~~~~~~~~-~l~~~vi~~~~l~~l~--~~yD~viiD~p~~ 78 (209)
T 3cwq_A 11 GVGKTTTAVHLSAYLALQG-ETLLIDGDPNR--SATGWGKRG-SLPFKVVDERQAAKYA--PKYQNIVIDTQAR 78 (209)
T ss_dssp TSSHHHHHHHHHHHHHTTS-CEEEEEECTTC--HHHHHHHHS-CCSSEEEEGGGHHHHG--GGCSEEEEEEECC
T ss_pred CCcHHHHHHHHHHHHHhcC-CEEEEECCCCC--CHHHHhcCC-CCCcceeCHHHHHHhh--hcCCEEEEeCCCC
Confidence 3444444555555444556 99999999874 222333322 2223566666555543 4799999999776
No 418
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=88.25 E-value=3.1 Score=29.89 Aligned_cols=66 Identities=11% Similarity=-0.036 Sum_probs=47.9
Q ss_pred CcEEEEEeCCchHHHHHHHHHHh-hcCceEEEEecchHHHhcCC--CCccEEEEeCCCc--ccHHHHHHhcc
Q 027409 69 CARHVCIVPDERSRLAYVKAMYD-VVGWVSEVIVRQAEEVMGEL--KGVDFLVVDCTSK--DFARVLRFARF 135 (223)
Q Consensus 69 ~g~i~TIE~d~e~~~~Ar~~~~~-a~G~~I~li~GdA~evL~~L--~~fDfVFIDa~K~--~Y~~~f~~~~~ 135 (223)
.-+|.-+|.|+...+.-+..+++ . |+.+-....++.+.+..+ ..+|+||+|..-. .-.++++.++.
T Consensus 8 ~~~iLivdd~~~~~~~l~~~L~~~~-~~~~v~~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~ 78 (143)
T 3cnb_A 8 DFSILIIEDDKEFADMLTQFLENLF-PYAKIKIAYNPFDAGDLLHTVKPDVVMLDLMMVGMDGFSICHRIKS 78 (143)
T ss_dssp -CEEEEECSCHHHHHHHHHHHHHHC-TTCEEEEECSHHHHHHHHHHTCCSEEEEETTCTTSCHHHHHHHHHT
T ss_pred CceEEEEECCHHHHHHHHHHHHhcc-CccEEEEECCHHHHHHHHHhcCCCEEEEecccCCCcHHHHHHHHHh
Confidence 46899999999999999999998 7 888333456666666554 3799999998643 33455665543
No 419
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=88.19 E-value=2.2 Score=31.16 Aligned_cols=64 Identities=11% Similarity=0.095 Sum_probs=47.1
Q ss_pred CcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC---CCccEEEEeCCC---cccHHHHHHhc
Q 027409 69 CARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL---KGVDFLVVDCTS---KDFARVLRFAR 134 (223)
Q Consensus 69 ~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L---~~fDfVFIDa~K---~~Y~~~f~~~~ 134 (223)
+-+|.-+|.|+...+.-+..+++. |+.+. ...++.+.+..+ ..+|+||+|..- ..-.++++.++
T Consensus 5 ~~~ilivdd~~~~~~~l~~~L~~~-g~~v~-~~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~ 74 (140)
T 3h5i_A 5 DKKILIVEDSKFQAKTIANILNKY-GYTVE-IALTGEAAVEKVSGGWYPDLILMDIELGEGMDGVQTALAIQ 74 (140)
T ss_dssp -CEEEEECSCHHHHHHHHHHHHHT-TCEEE-EESSHHHHHHHHHTTCCCSEEEEESSCSSSCCHHHHHHHHH
T ss_pred CcEEEEEeCCHHHHHHHHHHHHHc-CCEEE-EecChHHHHHHHhcCCCCCEEEEeccCCCCCCHHHHHHHHH
Confidence 358999999999999999999998 99854 455666555543 379999999864 34455665554
No 420
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=88.19 E-value=1.5 Score=30.76 Aligned_cols=64 Identities=11% Similarity=0.088 Sum_probs=46.6
Q ss_pred cEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCccEEEEeCCCcc--cHHHHHHhc
Q 027409 70 ARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVDFLVVDCTSKD--FARVLRFAR 134 (223)
Q Consensus 70 g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fDfVFIDa~K~~--Y~~~f~~~~ 134 (223)
.+|.-+|.++...+.-+..++.. |+.+.....++.+.+..+ ..+|+||+|..-.. -.++++.++
T Consensus 3 ~~ilivdd~~~~~~~l~~~l~~~-g~~vv~~~~~~~~a~~~~~~~~~dlil~D~~l~~~~g~~~~~~l~ 70 (120)
T 1tmy_A 3 KRVLIVDDAAFMRMMLKDIITKA-GYEVAGEATNGREAVEKYKELKPDIVTMDITMPEMNGIDAIKEIM 70 (120)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHCCSEEEEECSCGGGCHHHHHHHHH
T ss_pred ceEEEEcCcHHHHHHHHHHHhhc-CcEEEEEECCHHHHHHHHHhcCCCEEEEeCCCCCCcHHHHHHHHH
Confidence 47888999999999999999988 987444566776666554 37999999986432 234555543
No 421
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=88.12 E-value=3.2 Score=29.49 Aligned_cols=74 Identities=14% Similarity=0.005 Sum_probs=50.5
Q ss_pred CcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCccEEEEeCCCc--ccHHHHHHhccC-CCceEEE
Q 027409 69 CARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVDFLVVDCTSK--DFARVLRFARFS-NKGAVLA 143 (223)
Q Consensus 69 ~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fDfVFIDa~K~--~Y~~~f~~~~~l-~~GgvIV 143 (223)
+.+|.-+|.|+...+.-+..++.. |+.+. ...++.+.+..+ ..+|+|++|..-. .-.++++.++.. +.--+|+
T Consensus 3 ~~~ilivdd~~~~~~~l~~~l~~~-~~~v~-~~~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~ 80 (126)
T 1dbw_A 3 DYTVHIVDDEEPVRKSLAFMLTMN-GFAVK-MHQSAEAFLAFAPDVRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIV 80 (126)
T ss_dssp CCEEEEEESSHHHHHHHHHHHHHT-TCEEE-EESCHHHHHHHGGGCCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEE
T ss_pred CCEEEEEcCCHHHHHHHHHHHHhC-CcEEE-EeCCHHHHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEE
Confidence 357999999999999999999998 98854 456666666544 3699999998643 234455555433 2223444
Q ss_pred E
Q 027409 144 F 144 (223)
Q Consensus 144 ~ 144 (223)
.
T Consensus 81 ~ 81 (126)
T 1dbw_A 81 I 81 (126)
T ss_dssp E
T ss_pred E
Confidence 3
No 422
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=87.99 E-value=0.89 Score=40.55 Aligned_cols=95 Identities=11% Similarity=0.036 Sum_probs=52.5
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcC-CCCccEEE
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGE-LKGVDFLV 118 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~-L~~fDfVF 118 (223)
.++++|+=+|+| + .+..++. .+...+.+|+.+|+++++.+.+++. . |..+.....+..+ +.+ +..+|+|+
T Consensus 164 l~~~~V~ViGaG-~-iG~~~a~--~l~~~Ga~V~~~d~~~~~~~~~~~~---~-g~~~~~~~~~~~~-l~~~~~~~DvVi 234 (369)
T 2eez_A 164 VAPASVVILGGG-T-VGTNAAK--IALGMGAQVTILDVNHKRLQYLDDV---F-GGRVITLTATEAN-IKKSVQHADLLI 234 (369)
T ss_dssp BCCCEEEEECCS-H-HHHHHHH--HHHHTTCEEEEEESCHHHHHHHHHH---T-TTSEEEEECCHHH-HHHHHHHCSEEE
T ss_pred CCCCEEEEECCC-H-HHHHHHH--HHHhCCCEEEEEECCHHHHHHHHHh---c-CceEEEecCCHHH-HHHHHhCCCEEE
Confidence 567999999983 4 3443332 2233467999999999877766543 3 4333333333222 222 24689995
Q ss_pred EeCCCcc---cHHH-H-HHhccCCCceEEEE
Q 027409 119 VDCTSKD---FARV-L-RFARFSNKGAVLAF 144 (223)
Q Consensus 119 IDa~K~~---Y~~~-f-~~~~~l~~GgvIV~ 144 (223)
. +.... -+.+ . +.+..+++||+||.
T Consensus 235 ~-~~g~~~~~~~~li~~~~l~~mk~gg~iV~ 264 (369)
T 2eez_A 235 G-AVLVPGAKAPKLVTRDMLSLMKEGAVIVD 264 (369)
T ss_dssp E-CCC-------CCSCHHHHTTSCTTCEEEE
T ss_pred E-CCCCCccccchhHHHHHHHhhcCCCEEEE
Confidence 5 54321 1111 2 24455688888764
No 423
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=87.93 E-value=0.93 Score=31.21 Aligned_cols=63 Identities=6% Similarity=0.113 Sum_probs=46.5
Q ss_pred cEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCccEEEEeCCCc--ccHHHHHHhc
Q 027409 70 ARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVDFLVVDCTSK--DFARVLRFAR 134 (223)
Q Consensus 70 g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fDfVFIDa~K~--~Y~~~f~~~~ 134 (223)
.+|.-+|.|+...+.-+..++.. |+.+. ...++.+.+..+ ..+|+|++|..-. .-.++++.++
T Consensus 2 ~~iliv~~~~~~~~~l~~~l~~~-g~~v~-~~~~~~~~~~~l~~~~~dlii~d~~~~~~~~~~~~~~l~ 68 (119)
T 2j48_A 2 GHILLLEEEDEAATVVCEMLTAA-GFKVI-WLVDGSTALDQLDLLQPIVILMAWPPPDQSCLLLLQHLR 68 (119)
T ss_dssp CEEEEECCCHHHHHHHHHHHHHT-TCEEE-EESCHHHHHHHHHHHCCSEEEEECSTTCCTHHHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHHHHhC-CcEEE-EecCHHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHH
Confidence 47888999999999999999998 99854 356666666555 3799999998643 3345555553
No 424
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=87.92 E-value=2.7 Score=34.19 Aligned_cols=78 Identities=21% Similarity=0.252 Sum_probs=57.7
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHH--H----h----cC
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEE--V----M----GE 110 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~e--v----L----~~ 110 (223)
+-|.+|=.|.+.| .+++++...+. .+.+|+.++++++..+...+.+++. |..++++..|..+ . + ..
T Consensus 4 ~~k~vlITGas~g-IG~~~a~~l~~--~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (247)
T 3lyl_A 4 NEKVALVTGASRG-IGFEVAHALAS--KGATVVGTATSQASAEKFENSMKEK-GFKARGLVLNISDIESIQNFFAEIKAE 79 (247)
T ss_dssp TTCEEEESSCSSH-HHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 4578898898866 45666555443 4789999999999999888888887 7778888888642 1 1 22
Q ss_pred CCCccEEEEeCC
Q 027409 111 LKGVDFLVVDCT 122 (223)
Q Consensus 111 L~~fDfVFIDa~ 122 (223)
.+++|.++.-|.
T Consensus 80 ~~~id~li~~Ag 91 (247)
T 3lyl_A 80 NLAIDILVNNAG 91 (247)
T ss_dssp TCCCSEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 347899998875
No 425
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=87.90 E-value=2.2 Score=31.10 Aligned_cols=74 Identities=12% Similarity=0.146 Sum_probs=51.2
Q ss_pred CcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCccEEEEeCCCcc--cHHHHHHhccCCCceEEEE
Q 027409 69 CARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVDFLVVDCTSKD--FARVLRFARFSNKGAVLAF 144 (223)
Q Consensus 69 ~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fDfVFIDa~K~~--Y~~~f~~~~~l~~GgvIV~ 144 (223)
..+|.-+|.++...+.-+..++.. |+.+. ...++.+.+..+ ..+|+|++|..-.. -.++++.++....--+|+.
T Consensus 4 ~~~Ilivdd~~~~~~~l~~~L~~~-g~~v~-~~~~~~~al~~~~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~l 81 (136)
T 2qzj_A 4 QTKILIIDGDKDNCQKLKGFLEEK-GISID-LAYNCEEAIGKIFSNKYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYM 81 (136)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHTT-TCEEE-EESSHHHHHHHHHHCCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHHHC-CCEEE-EECCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEEE
Confidence 458999999999999999999988 98854 567777766554 37999999986432 3445555543322334444
No 426
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=87.84 E-value=0.57 Score=40.43 Aligned_cols=25 Identities=24% Similarity=0.356 Sum_probs=22.5
Q ss_pred EEEEecchHHHhcCCC--CccEEEEeC
Q 027409 97 SEVIVRQAEEVMGELK--GVDFLVVDC 121 (223)
Q Consensus 97 I~li~GdA~evL~~L~--~fDfVFIDa 121 (223)
++++.||++++|+.+. .||+||.|-
T Consensus 22 ~~i~~gD~~~~l~~l~~~s~DlIvtdP 48 (297)
T 2zig_A 22 HRLHVGDAREVLASFPEASVHLVVTSP 48 (297)
T ss_dssp EEEEESCHHHHHTTSCTTCEEEEEECC
T ss_pred CEEEECcHHHHHhhCCCCceeEEEECC
Confidence 7999999999999883 799999994
No 427
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=87.77 E-value=1.4 Score=32.61 Aligned_cols=65 Identities=20% Similarity=0.153 Sum_probs=47.5
Q ss_pred CcEEEEEeCCchHHHHHHHHHHh-hcCceEEEEecchHHHhcCC--CCccEEEEeCCCc--ccHHHHHHhc
Q 027409 69 CARHVCIVPDERSRLAYVKAMYD-VVGWVSEVIVRQAEEVMGEL--KGVDFLVVDCTSK--DFARVLRFAR 134 (223)
Q Consensus 69 ~g~i~TIE~d~e~~~~Ar~~~~~-a~G~~I~li~GdA~evL~~L--~~fDfVFIDa~K~--~Y~~~f~~~~ 134 (223)
.-+|.-+|.|+...+.-+..+++ . |+.+.....++.+.+..+ ..+|+|++|..-. .-.++++.++
T Consensus 5 ~~~ILivdd~~~~~~~l~~~L~~~~-~~~v~~~~~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~ 74 (153)
T 3cz5_A 5 TARIMLVDDHPIVREGYRRLIERRP-GYAVVAEAADAGEAYRLYRETTPDIVVMDLTLPGPGGIEATRHIR 74 (153)
T ss_dssp CEEEEEECSCHHHHHHHHHHHTTST-TEEEEEEESSHHHHHHHHHTTCCSEEEECSCCSSSCHHHHHHHHH
T ss_pred ccEEEEECCcHHHHHHHHHHHhhCC-CcEEEEEeCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHH
Confidence 35799999999999999999988 6 877544567776666544 3699999998644 3345555554
No 428
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=87.72 E-value=1.8 Score=30.67 Aligned_cols=63 Identities=8% Similarity=0.134 Sum_probs=46.8
Q ss_pred cEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCccEEEEeCCCcc--cHHHHHHhc
Q 027409 70 ARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVDFLVVDCTSKD--FARVLRFAR 134 (223)
Q Consensus 70 g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fDfVFIDa~K~~--Y~~~f~~~~ 134 (223)
.+|.-+|.|+...+.-+..++.. |+.+. ...++.+.+..+ ..+|+|++|..-.. -.++++.++
T Consensus 4 ~~ilivdd~~~~~~~l~~~l~~~-~~~v~-~~~~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~ 70 (124)
T 1srr_A 4 EKILIVDDQSGIRILLNEVFNKE-GYQTF-QAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMK 70 (124)
T ss_dssp CEEEEECSCHHHHHHHHHHHHTT-TCEEE-EESSHHHHHHHHHHHCCSEEEEESCCTTCCHHHHHHHHH
T ss_pred ceEEEEeCCHHHHHHHHHHHHHC-CcEEE-EeCCHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHH
Confidence 47899999999999999999998 98854 566766666654 37999999986443 244555554
No 429
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=87.64 E-value=2 Score=35.59 Aligned_cols=78 Identities=17% Similarity=0.124 Sum_probs=57.2
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHH------HhcC----
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEE------VMGE---- 110 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~e------vL~~---- 110 (223)
+-|.+|=.|.+.| ++.+++...+. .+.+|+.++++++..+...+.++.. |-.+.++.+|..+ .+.+
T Consensus 11 ~~k~vlVTGas~g-IG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 86 (256)
T 3gaf_A 11 NDAVAIVTGAAAG-IGRAIAGTFAK--AGASVVVTDLKSEGAEAVAAAIRQA-GGKAIGLECNVTDEQHREAVIKAALDQ 86 (256)
T ss_dssp TTCEEEECSCSSH-HHHHHHHHHHH--HTCEEEEEESSHHHHHHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4578999998877 45666555443 3778999999999999988888887 7668888887642 1222
Q ss_pred CCCccEEEEeCC
Q 027409 111 LKGVDFLVVDCT 122 (223)
Q Consensus 111 L~~fDfVFIDa~ 122 (223)
+++.|.++.-|.
T Consensus 87 ~g~id~lv~nAg 98 (256)
T 3gaf_A 87 FGKITVLVNNAG 98 (256)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 247999998775
No 430
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=87.58 E-value=2.2 Score=30.16 Aligned_cols=63 Identities=10% Similarity=0.121 Sum_probs=47.2
Q ss_pred cEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCCC--CccEEEEeCCCcc--cHHHHHHhc
Q 027409 70 ARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGELK--GVDFLVVDCTSKD--FARVLRFAR 134 (223)
Q Consensus 70 g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L~--~fDfVFIDa~K~~--Y~~~f~~~~ 134 (223)
.+|.-+|.++...+.-+..++.. |+.+. ...++.+.+..+. .+|+|++|..-.. -.+++..++
T Consensus 3 ~~ilivdd~~~~~~~l~~~l~~~-g~~v~-~~~~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~ 69 (127)
T 2jba_A 3 RRILVVEDEAPIREMVCFVLEQN-GFQPV-EAEDYDSAVNQLNEPWPDLILLAWMLPGGSGIQFIKHLR 69 (127)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHT-TCEEE-EECSHHHHHTTCSSSCCSEEEEESEETTEEHHHHHHHHH
T ss_pred cEEEEEcCCHHHHHHHHHHHHHC-CceEE-EeCCHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHH
Confidence 36888999999999999999998 98854 4677777777663 6999999985432 244555554
No 431
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=87.54 E-value=0.18 Score=44.68 Aligned_cols=115 Identities=17% Similarity=0.145 Sum_probs=65.9
Q ss_pred CcHHHHHHHHHHHHh--cCCCeEEEEccCcchHHHHHHHHHhcCC-CCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEE
Q 027409 25 KESGVAELLSAMAAG--WNAKLIVEAWTHGGPITTSIGLAIAARH-TCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVI 100 (223)
Q Consensus 25 i~p~~g~fL~~L~~~--~~ak~ILEIGT~~Gys~Stl~la~A~~~-~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li 100 (223)
.+...-.++.+.-+- ....+||++|||.|- |.-.|+.. .-..++.+++.......+.. ++.. |.. +.+.
T Consensus 72 rSRAAfKL~ei~eK~~Lk~~~~VLDLGaAPGG-----WsQvAa~~~gv~sV~GvdvG~d~~~~pi~-~~~~-g~~ii~~~ 144 (282)
T 3gcz_A 72 VSRGSAKLRWMEERGYVKPTGIVVDLGCGRGG-----WSYYAASLKNVKKVMAFTLGVQGHEKPIM-RTTL-GWNLIRFK 144 (282)
T ss_dssp SSTHHHHHHHHHHTTSCCCCEEEEEETCTTCH-----HHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCBT-TGGGEEEE
T ss_pred ecHHHHHHHHHHHhcCCCCCCEEEEeCCCCCH-----HHHHHHHhcCCCeeeeEEeccCccccccc-cccC-CCceEEee
Confidence 556666666655543 355699999999994 33323322 23467888886543332321 1223 555 6666
Q ss_pred ec-chHHHhcCCCCccEEEEeCCCc-------ccH--HHHHHh-ccCCCc--eEEEEeCCCC
Q 027409 101 VR-QAEEVMGELKGVDFLVVDCTSK-------DFA--RVLRFA-RFSNKG--AVLAFKNAFQ 149 (223)
Q Consensus 101 ~G-dA~evL~~L~~fDfVFIDa~K~-------~Y~--~~f~~~-~~l~~G--gvIV~DNvl~ 149 (223)
.+ |..+ ++. .++|+|+-|.+.. +|. .+++.+ ..|+|| |..|+ -+|.
T Consensus 145 ~~~dv~~-l~~-~~~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~-KvF~ 203 (282)
T 3gcz_A 145 DKTDVFN-MEV-IPGDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCI-KVLC 203 (282)
T ss_dssp CSCCGGG-SCC-CCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEE-EESC
T ss_pred CCcchhh-cCC-CCcCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEE-EEec
Confidence 55 3221 211 4899999998755 222 234433 456888 99888 4555
No 432
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=87.49 E-value=4.1 Score=29.48 Aligned_cols=76 Identities=8% Similarity=-0.049 Sum_probs=50.0
Q ss_pred CcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCccEEEEeCCCc--ccHHHHHHhccCCCce-EEE
Q 027409 69 CARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVDFLVVDCTSK--DFARVLRFARFSNKGA-VLA 143 (223)
Q Consensus 69 ~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fDfVFIDa~K~--~Y~~~f~~~~~l~~Gg-vIV 143 (223)
.-+|.-+|.|+...+.-+..+++..|+.+--...++.+.+..+ ..+|+|++|..-. .-.++++.++...+.. +|+
T Consensus 9 ~~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~al~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ 88 (143)
T 2qv0_A 9 KMKVIIVEDEFLAQQELSWLINTHSQMEIVGSFDDGLDVLKFLQHNKVDAIFLDINIPSLDGVLLAQNISQFAHKPFIVF 88 (143)
T ss_dssp -CEEEEECSCHHHHHHHHHHHHHHSCCEEEEEESCHHHHHHHHHHCCCSEEEECSSCSSSCHHHHHHHHTTSTTCCEEEE
T ss_pred ceEEEEEcCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCEEEEecCCCCCCHHHHHHHHHccCCCceEEE
Confidence 3589999999999999999998752555333456776666554 3799999998643 3345556565443443 443
Q ss_pred E
Q 027409 144 F 144 (223)
Q Consensus 144 ~ 144 (223)
.
T Consensus 89 ~ 89 (143)
T 2qv0_A 89 I 89 (143)
T ss_dssp E
T ss_pred E
Confidence 3
No 433
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=87.46 E-value=2.6 Score=36.15 Aligned_cols=94 Identities=12% Similarity=0.034 Sum_probs=54.7
Q ss_pred HhcCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCCCCcc
Q 027409 38 AGWNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGELKGVD 115 (223)
Q Consensus 38 ~~~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L~~fD 115 (223)
+...-++||=+|-+.|.+..++.+|.+. +.+++.+.. +++.+.+ ++. |.. +.....| .....+..+|
T Consensus 149 ~~~~g~~vlV~Ga~G~vG~~a~q~a~~~---Ga~vi~~~~-~~~~~~~----~~l-Ga~~~i~~~~~~--~~~~~~~g~D 217 (321)
T 3tqh_A 149 EVKQGDVVLIHAGAGGVGHLAIQLAKQK---GTTVITTAS-KRNHAFL----KAL-GAEQCINYHEED--FLLAISTPVD 217 (321)
T ss_dssp TCCTTCEEEESSTTSHHHHHHHHHHHHT---TCEEEEEEC-HHHHHHH----HHH-TCSEEEETTTSC--HHHHCCSCEE
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHc---CCEEEEEec-cchHHHH----HHc-CCCEEEeCCCcc--hhhhhccCCC
Confidence 3445578998874446555666776543 678888874 4444444 445 765 3322223 1333346799
Q ss_pred EEEEeCCCcccHHHHHHhccCCCceEEEEe
Q 027409 116 FLVVDCTSKDFARVLRFARFSNKGAVLAFK 145 (223)
Q Consensus 116 fVFIDa~K~~Y~~~f~~~~~l~~GgvIV~D 145 (223)
+|| |+--.. ..-..++.+++||.++.=
T Consensus 218 ~v~-d~~g~~--~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 218 AVI-DLVGGD--VGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp EEE-ESSCHH--HHHHHGGGEEEEEEEEEC
T ss_pred EEE-ECCCcH--HHHHHHHhccCCCEEEEe
Confidence 776 554332 223355777889988853
No 434
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=87.15 E-value=2.4 Score=35.75 Aligned_cols=93 Identities=19% Similarity=0.206 Sum_probs=57.4
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCCCCccEEEE
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGELKGVDFLVV 119 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L~~fDfVFI 119 (223)
++..+|.=||+ |..+++++...+....+-.|+..|++++..+.+++ . |.... ...+..+.+ ...|+||+
T Consensus 4 M~~~~I~iIG~--G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~----~-g~~~~-~~~~~~~~~---~~aDvVil 72 (290)
T 3b1f_A 4 MEEKTIYIAGL--GLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALE----R-GIVDE-ATADFKVFA---ALADVIIL 72 (290)
T ss_dssp GCCCEEEEECC--SHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHH----T-TSCSE-EESCTTTTG---GGCSEEEE
T ss_pred cccceEEEEee--CHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHH----c-CCccc-ccCCHHHhh---cCCCEEEE
Confidence 34578999997 45566665554432224579999999887765543 4 55211 122322222 46899999
Q ss_pred eCCCcccHHHHHHhc-c-CCCceEEE
Q 027409 120 DCTSKDFARVLRFAR-F-SNKGAVLA 143 (223)
Q Consensus 120 Da~K~~Y~~~f~~~~-~-l~~GgvIV 143 (223)
=.-.....++++.+. . +++|.+|+
T Consensus 73 avp~~~~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 73 AVPIKKTIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp CSCHHHHHHHHHHHHTSCCCTTCEEE
T ss_pred cCCHHHHHHHHHHHHhcCCCCCCEEE
Confidence 876666677777654 4 67777666
No 435
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=87.12 E-value=2.2 Score=30.34 Aligned_cols=65 Identities=20% Similarity=0.186 Sum_probs=46.9
Q ss_pred CcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--C-CccEEEEeCCCc---ccHHHHHHhcc
Q 027409 69 CARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--K-GVDFLVVDCTSK---DFARVLRFARF 135 (223)
Q Consensus 69 ~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~-~fDfVFIDa~K~---~Y~~~f~~~~~ 135 (223)
.-+|.-+|.|+...+.-+..++.. |+.+.. ..++.+.+..+ . .+|+|++|..-. .-.++++.++.
T Consensus 5 ~~~ilivdd~~~~~~~l~~~L~~~-g~~v~~-~~~~~~a~~~l~~~~~~dlvi~d~~l~~~~~g~~~~~~l~~ 75 (132)
T 2rdm_A 5 AVTILLADDEAILLLDFESTLTDA-GFLVTA-VSSGAKAIEMLKSGAAIDGVVTDIRFCQPPDGWQVARVARE 75 (132)
T ss_dssp SCEEEEECSSHHHHHHHHHHHHHT-TCEEEE-ESSHHHHHHHHHTTCCCCEEEEESCCSSSSCHHHHHHHHHH
T ss_pred CceEEEEcCcHHHHHHHHHHHHHc-CCEEEE-ECCHHHHHHHHHcCCCCCEEEEeeeCCCCCCHHHHHHHHHh
Confidence 357999999999999999999988 998543 56666655443 3 799999998643 33455665543
No 436
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=87.11 E-value=1.4 Score=39.76 Aligned_cols=95 Identities=12% Similarity=0.092 Sum_probs=57.7
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecch-------------
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQA------------- 104 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA------------- 104 (223)
..-++||=+|.+.|.+..++.+|.+ .+.+++.++.++++.+.+++ . |.. +.....|.
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~---~Ga~vi~~~~~~~~~~~~~~----l-Ga~~~i~~~~~~~~~~~~~~~~~~~~ 290 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKN---GGGIPVAVVSSAQKEAAVRA----L-GCDLVINRAELGITDDIADDPRRVVE 290 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHH---TTCEEEEEESSHHHHHHHHH----T-TCCCEEEHHHHTCCTTGGGCHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHH---cCCEEEEEeCCHHHHHHHHh----c-CCCEEEecccccccccccccccccch
Confidence 3457899999866665466666654 36788888899988887753 4 654 22211110
Q ss_pred -----HHHhcCC--CCccEEEEeCCCcccHHHHH-HhccCCCceEEEEeC
Q 027409 105 -----EEVMGEL--KGVDFLVVDCTSKDFARVLR-FARFSNKGAVLAFKN 146 (223)
Q Consensus 105 -----~evL~~L--~~fDfVFIDa~K~~Y~~~f~-~~~~l~~GgvIV~DN 146 (223)
.+.+.++ ..+|+|| |+.-. ..++ .+..+++||.||.=.
T Consensus 291 ~~~~~~~~v~~~~g~g~Dvvi-d~~G~---~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 291 TGRKLAKLVVEKAGREPDIVF-EHTGR---VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHHHSSCCSEEE-ECSCH---HHHHHHHHHSCTTCEEEESC
T ss_pred hhhHHHHHHHHHhCCCceEEE-ECCCc---hHHHHHHHHHhcCCEEEEEe
Confidence 2223322 3699886 55433 3454 456678888887643
No 437
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=86.96 E-value=3 Score=34.44 Aligned_cols=78 Identities=10% Similarity=0.098 Sum_probs=54.9
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCc-eEEEEecch----H----HHhc--
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGW-VSEVIVRQA----E----EVMG-- 109 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~-~I~li~GdA----~----evL~-- 109 (223)
+-|.+|=.|.+.| ++.+++...+. .+.+|+.++++++..+.+.+.+... +- .+.++..|. . +.+.
T Consensus 11 ~~k~vlVTGas~g-IG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (252)
T 3f1l_A 11 NDRIILVTGASDG-IGREAAMTYAR--YGATVILLGRNEEKLRQVASHINEE-TGRQPQWFILDLLTCTSENCQQLAQRI 86 (252)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHH-HSCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCh-HHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhh-cCCCceEEEEecccCCHHHHHHHHHHH
Confidence 4578999998876 45666555443 4789999999999988888888766 44 367777776 1 1222
Q ss_pred --CCCCccEEEEeCC
Q 027409 110 --ELKGVDFLVVDCT 122 (223)
Q Consensus 110 --~L~~fDfVFIDa~ 122 (223)
.+++.|.++.-|.
T Consensus 87 ~~~~g~id~lv~nAg 101 (252)
T 3f1l_A 87 AVNYPRLDGVLHNAG 101 (252)
T ss_dssp HHHCSCCSEEEECCC
T ss_pred HHhCCCCCEEEECCc
Confidence 2347999998775
No 438
>3n0r_A Response regulator; sigma factor, receiver, two-component SI transduction, signaling protein; HET: MSE GOL; 1.25A {Caulobacter vibrioides} PDB: 3t0y_A
Probab=86.95 E-value=2 Score=36.79 Aligned_cols=56 Identities=9% Similarity=0.073 Sum_probs=45.9
Q ss_pred CCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCccEEEEeCCCc
Q 027409 68 TCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVDFLVVDCTSK 124 (223)
Q Consensus 68 ~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fDfVFIDa~K~ 124 (223)
...+|.-+|.|+......+..+++. |+.|.-...|+.+.|..+ .+||+|++|..-.
T Consensus 159 l~~rILvVdD~~~~~~~l~~~L~~~-g~~v~~~a~~g~eAl~~~~~~~~dlvl~D~~MP 216 (286)
T 3n0r_A 159 LATEVLIIEDEPVIAADIEALVREL-GHDVTDIAATRGEALEAVTRRTPGLVLADIQLA 216 (286)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHCCCSEEEEESCCT
T ss_pred CCCcEEEEcCCHHHHHHHHHHhhcc-CceEEEEeCCHHHHHHHHHhCCCCEEEEcCCCC
Confidence 3568999999999999999999999 998654567777777665 3799999998643
No 439
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=86.90 E-value=3.1 Score=34.70 Aligned_cols=79 Identities=13% Similarity=0.074 Sum_probs=56.2
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHH------Hhc----
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEE------VMG---- 109 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~e------vL~---- 109 (223)
..-|+||=.|.+.| .+..++...+. .+.+|+.++++++..+...+.++.. |-.++++.+|..+ .+.
T Consensus 29 l~~k~vlITGasgg-IG~~la~~L~~--~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~ 104 (272)
T 1yb1_A 29 VTGEIVLITGAGHG-IGRLTAYEFAK--LKSKLVLWDINKHGLEETAAKCKGL-GAKVHTFVVDCSNREDIYSSAKKVKA 104 (272)
T ss_dssp CTTCEEEEETTTSH-HHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCch-HHHHHHHHHHH--CCCEEEEEEcCHHHHHHHHHHHHhc-CCeEEEEEeeCCCHHHHHHHHHHHHH
Confidence 34588999998866 45665554443 4678999999998888877778776 6668888888542 122
Q ss_pred CCCCccEEEEeCC
Q 027409 110 ELKGVDFLVVDCT 122 (223)
Q Consensus 110 ~L~~fDfVFIDa~ 122 (223)
.++++|.|+.-|.
T Consensus 105 ~~g~iD~li~~Ag 117 (272)
T 1yb1_A 105 EIGDVSILVNNAG 117 (272)
T ss_dssp HTCCCSEEEECCC
T ss_pred HCCCCcEEEECCC
Confidence 2347999998775
No 440
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=86.90 E-value=2.2 Score=31.04 Aligned_cols=63 Identities=13% Similarity=0.043 Sum_probs=44.8
Q ss_pred cEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC----CCccEEEEeCCCcc--cHHHHHHhc
Q 027409 70 ARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL----KGVDFLVVDCTSKD--FARVLRFAR 134 (223)
Q Consensus 70 g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L----~~fDfVFIDa~K~~--Y~~~f~~~~ 134 (223)
-+|.-+|.|+...+.-+..+++. |+.+. ...++.+.+..+ ..+|+||+|..-.. -.++++.++
T Consensus 4 ~~ilivdd~~~~~~~l~~~l~~~-g~~v~-~~~~~~~a~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~ 72 (143)
T 3jte_A 4 AKILVIDDESTILQNIKFLLEID-GNEVL-TASSSTEGLRIFTENCNSIDVVITDMKMPKLSGMDILREIK 72 (143)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHT-TCEEE-EESSHHHHHHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHH
T ss_pred CEEEEEcCCHHHHHHHHHHHHhC-CceEE-EeCCHHHHHHHHHhCCCCCCEEEEeCCCCCCcHHHHHHHHH
Confidence 47899999999999999999998 98743 444554444332 37999999986433 345555554
No 441
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=86.83 E-value=3.2 Score=30.61 Aligned_cols=66 Identities=18% Similarity=0.138 Sum_probs=45.7
Q ss_pred cEEEEEeCCchHHHHHHHHHHhhcCce-EEEEecchHHHhcCC--CCccEEEEeCCCc--ccHHHHHHhccC
Q 027409 70 ARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVRQAEEVMGEL--KGVDFLVVDCTSK--DFARVLRFARFS 136 (223)
Q Consensus 70 g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~GdA~evL~~L--~~fDfVFIDa~K~--~Y~~~f~~~~~l 136 (223)
-+|.-+|.|+...+.-+..+++. |.. .-....++.+.+..+ ..+|+||+|..-. .-.++++.++..
T Consensus 21 ~~iLivdd~~~~~~~l~~~L~~~-~~~~~v~~~~~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~ 91 (150)
T 4e7p_A 21 MKVLVAEDQSMLRDAMCQLLTLQ-PDVESVLQAKNGQEAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSE 91 (150)
T ss_dssp EEEEEECSCHHHHHHHHHHHHTS-TTEEEEEEESSHHHHHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHT
T ss_pred cEEEEEcCCHHHHHHHHHHHHhC-CCcEEEEEECCHHHHHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHh
Confidence 37999999999999999999987 633 233456666665544 3799999998643 334555555433
No 442
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=86.82 E-value=2.8 Score=35.38 Aligned_cols=79 Identities=18% Similarity=0.180 Sum_probs=57.8
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHH--H----hcC---
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEE--V----MGE--- 110 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~e--v----L~~--- 110 (223)
..-|.+|=.|.+.| ++.+++...+. .+.+|+.++++++..+...+.++.. |..+.++.+|..+ . +.+
T Consensus 30 l~gk~~lVTGas~G-IG~aia~~la~--~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~ 105 (276)
T 3r1i_A 30 LSGKRALITGASTG-IGKKVALAYAE--AGAQVAVAARHSDALQVVADEIAGV-GGKALPIRCDVTQPDQVRGMLDQMTG 105 (276)
T ss_dssp CTTCEEEEESTTSH-HHHHHHHHHHH--TTCEEEEEESSGGGGHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCH-HHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 35589999998877 45666555443 4789999999999999888888887 7667777777632 2 222
Q ss_pred -CCCccEEEEeCC
Q 027409 111 -LKGVDFLVVDCT 122 (223)
Q Consensus 111 -L~~fDfVFIDa~ 122 (223)
++++|.++.-|.
T Consensus 106 ~~g~iD~lvnnAg 118 (276)
T 3r1i_A 106 ELGGIDIAVCNAG 118 (276)
T ss_dssp HHSCCSEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 247999998775
No 443
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=86.76 E-value=3.7 Score=34.13 Aligned_cols=80 Identities=16% Similarity=0.121 Sum_probs=56.2
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCC------------chHHHHHHHHHHhhcCceEEEEecchHH-
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPD------------ERSRLAYVKAMYDVVGWVSEVIVRQAEE- 106 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d------------~e~~~~Ar~~~~~a~G~~I~li~GdA~e- 106 (223)
..-|.+|=.|.+.| ++.+++...+ ..+.+|+.++++ ++..+...+.++.. |..+.++.+|..+
T Consensus 11 l~gk~vlVTGas~g-IG~~ia~~l~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~ 86 (278)
T 3sx2_A 11 LTGKVAFITGAARG-QGRAHAVRLA--ADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI-GSRIVARQADVRDR 86 (278)
T ss_dssp TTTCEEEEESTTSH-HHHHHHHHHH--HTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH-TCCEEEEECCTTCH
T ss_pred CCCCEEEEECCCCh-HHHHHHHHHH--HCCCeEEEEecccccccccccccchHHHHHHHHHHHhc-CCeEEEEeCCCCCH
Confidence 34588999998877 4566655544 347899999987 67777777777777 7668888888532
Q ss_pred -----Hhc----CCCCccEEEEeCCC
Q 027409 107 -----VMG----ELKGVDFLVVDCTS 123 (223)
Q Consensus 107 -----vL~----~L~~fDfVFIDa~K 123 (223)
.+. +++..|.++.-|.-
T Consensus 87 ~~v~~~~~~~~~~~g~id~lv~nAg~ 112 (278)
T 3sx2_A 87 ESLSAALQAGLDELGRLDIVVANAGI 112 (278)
T ss_dssp HHHHHHHHHHHHHHCCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 222 22479999988753
No 444
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=86.72 E-value=7 Score=34.67 Aligned_cols=77 Identities=9% Similarity=0.120 Sum_probs=51.9
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCc-e-EEEEecchHHHhcCCCCccEEE
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGW-V-SEVIVRQAEEVMGELKGVDFLV 118 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~-~-I~li~GdA~evL~~L~~fDfVF 118 (223)
+.++|.=||+ |..+++++.+.+..+--+.|+-+|+++++.+--..-+.+...+ . +++..+|.. .+..-|+|+
T Consensus 8 ~~~kV~ViGa--G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~----a~~~aDiVv 81 (326)
T 3vku_A 8 DHQKVILVGD--GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYS----DAKDADLVV 81 (326)
T ss_dssp CCCEEEEECC--SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGG----GGTTCSEEE
T ss_pred CCCEEEEECC--CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHH----HhcCCCEEE
Confidence 5578999995 6677888777665444458999999988776555556654122 2 666666532 245789999
Q ss_pred EeCCC
Q 027409 119 VDCTS 123 (223)
Q Consensus 119 IDa~K 123 (223)
+=|..
T Consensus 82 i~ag~ 86 (326)
T 3vku_A 82 ITAGA 86 (326)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 97653
No 445
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=86.70 E-value=3.4 Score=32.27 Aligned_cols=65 Identities=12% Similarity=0.033 Sum_probs=48.9
Q ss_pred CcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCccEEEEeCCCc--ccHHHHHHhcc
Q 027409 69 CARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVDFLVVDCTSK--DFARVLRFARF 135 (223)
Q Consensus 69 ~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fDfVFIDa~K~--~Y~~~f~~~~~ 135 (223)
..+|.-+|.|+...+.-+..++.. |+.+. ...++.+.+..+ ..+|+|++|..-. +-.++++.++.
T Consensus 4 ~~~ilivdd~~~~~~~l~~~L~~~-g~~v~-~~~~~~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~ 72 (208)
T 1yio_A 4 KPTVFVVDDDMSVREGLRNLLRSA-GFEVE-TFDCASTFLEHRRPEQHGCLVLDMRMPGMSGIELQEQLTA 72 (208)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHTT-TCEEE-EESSHHHHHHHCCTTSCEEEEEESCCSSSCHHHHHHHHHH
T ss_pred CCEEEEEcCCHHHHHHHHHHHHhC-CceEE-EcCCHHHHHHhhhccCCCEEEEeCCCCCCCHHHHHHHHHh
Confidence 458999999999999999999998 98855 457777777655 3799999998643 33455555543
No 446
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=86.66 E-value=3.6 Score=33.86 Aligned_cols=78 Identities=19% Similarity=0.181 Sum_probs=54.9
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHH------Hhc----C
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEE------VMG----E 110 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~e------vL~----~ 110 (223)
.-|.||=.|.+.| ++.+++...+. .+.+|+.++++++..+...+.++.. |..+.++.+|..+ .+. .
T Consensus 13 ~~k~vlVTGas~g-IG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 88 (260)
T 2zat_A 13 ENKVALVTASTDG-IGLAIARRLAQ--DGAHVVVSSRKQENVDRTVATLQGE-GLSVTGTVCHVGKAEDRERLVAMAVNL 88 (260)
T ss_dssp TTCEEEESSCSSH-HHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 4578998888766 46666655443 4679999999998888777778776 7667777777431 122 2
Q ss_pred CCCccEEEEeCC
Q 027409 111 LKGVDFLVVDCT 122 (223)
Q Consensus 111 L~~fDfVFIDa~ 122 (223)
++++|.++.-|.
T Consensus 89 ~g~iD~lv~~Ag 100 (260)
T 2zat_A 89 HGGVDILVSNAA 100 (260)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 247999998775
No 447
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=86.65 E-value=0.29 Score=42.72 Aligned_cols=94 Identities=12% Similarity=0.009 Sum_probs=58.1
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCc-EEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCccEE
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCA-RHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVDFL 117 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g-~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fDfV 117 (223)
.-++||-+|. .|.+..++.+|++. +. +|+.++.++++.+.+++. + ..-+.....+..+.+.++ ..+|+|
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~q~a~~~---Ga~~Vi~~~~~~~~~~~~~~l---a-~~v~~~~~~~~~~~~~~~~~~g~D~v 235 (343)
T 2dq4_A 164 SGKSVLITGA-GPIGLMAAMVVRAS---GAGPILVSDPNPYRLAFARPY---A-DRLVNPLEEDLLEVVRRVTGSGVEVL 235 (343)
T ss_dssp TTSCEEEECC-SHHHHHHHHHHHHT---TCCSEEEECSCHHHHGGGTTT---C-SEEECTTTSCHHHHHHHHHSSCEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHc---CCCEEEEECCCHHHHHHHHHh---H-HhccCcCccCHHHHHHHhcCCCCCEE
Confidence 4578999998 56655666666542 55 899999999998888775 3 111222223434444432 369988
Q ss_pred EEeCCCcccHHHHH-HhccCCCceEEEEe
Q 027409 118 VVDCTSKDFARVLR-FARFSNKGAVLAFK 145 (223)
Q Consensus 118 FIDa~K~~Y~~~f~-~~~~l~~GgvIV~D 145 (223)
| |+.- ....++ .++.+++||.+|.=
T Consensus 236 i-d~~g--~~~~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 236 L-EFSG--NEAAIHQGLMALIPGGEARIL 261 (343)
T ss_dssp E-ECSC--CHHHHHHHHHHEEEEEEEEEC
T ss_pred E-ECCC--CHHHHHHHHHHHhcCCEEEEE
Confidence 6 5542 233454 44566788877753
No 448
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=86.60 E-value=0.75 Score=39.83 Aligned_cols=41 Identities=20% Similarity=0.058 Sum_probs=24.6
Q ss_pred CCCeEEEEccCcchHHHH--HHHHHhcCCCCcEEEEEeCCchH
Q 027409 41 NAKLIVEAWTHGGPITTS--IGLAIAARHTCARHVCIVPDERS 81 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~St--l~la~A~~~~~g~i~TIE~d~e~ 81 (223)
+++.|+=.++..|.+-|+ ..||.+....+-++.-||.|+..
T Consensus 91 ~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~~~ 133 (286)
T 3la6_A 91 QNNVLMMTGVSPSIGMTFVCANLAAVISQTNKRVLLIDCDMRK 133 (286)
T ss_dssp TCCEEEEEESSSSSSHHHHHHHHHHHHHTTTCCEEEEECCTTT
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeccCCC
Confidence 456666666544433344 34444444456689999999874
No 449
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=86.51 E-value=1.1 Score=33.02 Aligned_cols=55 Identities=13% Similarity=0.134 Sum_probs=42.1
Q ss_pred CcEEEEEeCCchHHHHHHHHHHhhcC-ceEEEEecchHHHhcCC----CCccEEEEeCCCcc
Q 027409 69 CARHVCIVPDERSRLAYVKAMYDVVG-WVSEVIVRQAEEVMGEL----KGVDFLVVDCTSKD 125 (223)
Q Consensus 69 ~g~i~TIE~d~e~~~~Ar~~~~~a~G-~~I~li~GdA~evL~~L----~~fDfVFIDa~K~~ 125 (223)
..+|.-+|.|+...+.-+..+++. | +.+.. ..++.+.+..+ ..+|+||+|..-..
T Consensus 20 ~~~ilivdd~~~~~~~l~~~L~~~-g~~~v~~-~~~~~~~~~~~~~~~~~~dlvi~D~~l~~ 79 (146)
T 4dad_A 20 MINILVASEDASRLAHLARLVGDA-GRYRVTR-TVGRAAQIVQRTDGLDAFDILMIDGAALD 79 (146)
T ss_dssp GCEEEEECSCHHHHHHHHHHHHHH-CSCEEEE-ECCCHHHHTTCHHHHTTCSEEEEECTTCC
T ss_pred CCeEEEEeCCHHHHHHHHHHHhhC-CCeEEEE-eCCHHHHHHHHHhcCCCCCEEEEeCCCCC
Confidence 468999999999999999999998 8 87443 44555555444 47999999986443
No 450
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=86.45 E-value=8.2 Score=33.63 Aligned_cols=75 Identities=13% Similarity=0.052 Sum_probs=49.2
Q ss_pred eEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhh--cCceEEEEecchHHHhcCCCCccEEEEeC
Q 027409 44 LIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDV--VGWVSEVIVRQAEEVMGELKGVDFLVVDC 121 (223)
Q Consensus 44 ~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a--~G~~I~li~GdA~evL~~L~~fDfVFIDa 121 (223)
+|.=||+ |+.++++++..+..+.-+.|+-+|+++++++.-..-+.+. +...+++..++ .+. +..-|+|++=+
T Consensus 2 KI~IiGa--G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~~~-~~a---~~~aD~Vii~a 75 (310)
T 2xxj_A 2 KVGIVGS--GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAGS-YGD---LEGARAVVLAA 75 (310)
T ss_dssp EEEEECC--SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEECC-GGG---GTTEEEEEECC
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEECC-HHH---hCCCCEEEECC
Confidence 5677886 6677887777666554579999999998877533334443 12225666555 333 45799999977
Q ss_pred CCc
Q 027409 122 TSK 124 (223)
Q Consensus 122 ~K~ 124 (223)
...
T Consensus 76 g~~ 78 (310)
T 2xxj_A 76 GVA 78 (310)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 451
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=86.39 E-value=6.7 Score=32.75 Aligned_cols=93 Identities=12% Similarity=0.112 Sum_probs=55.3
Q ss_pred CeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEE---------EecchHHHhcCCCC
Q 027409 43 KLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEV---------IVRQAEEVMGELKG 113 (223)
Q Consensus 43 k~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~l---------i~GdA~evL~~L~~ 113 (223)
.+|.=||+ |..+++++...+. .+-.|+-++++++..+..+ +. |+.+.- ..-+..+....+..
T Consensus 4 m~i~iiG~--G~~G~~~a~~l~~--~g~~V~~~~r~~~~~~~~~----~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (316)
T 2ew2_A 4 MKIAIAGA--GAMGSRLGIMLHQ--GGNDVTLIDQWPAHIEAIR----KN-GLIADFNGEEVVANLPIFSPEEIDHQNEQ 74 (316)
T ss_dssp CEEEEECC--SHHHHHHHHHHHH--TTCEEEEECSCHHHHHHHH----HH-CEEEEETTEEEEECCCEECGGGCCTTSCC
T ss_pred CeEEEECc--CHHHHHHHHHHHh--CCCcEEEEECCHHHHHHHH----hC-CEEEEeCCCeeEecceeecchhhcccCCC
Confidence 47888998 4555666554433 2447999999988766543 33 443211 00022222222347
Q ss_pred ccEEEEeCCCcccHHHHHHhcc-CCCceEEEE
Q 027409 114 VDFLVVDCTSKDFARVLRFARF-SNKGAVLAF 144 (223)
Q Consensus 114 fDfVFIDa~K~~Y~~~f~~~~~-l~~GgvIV~ 144 (223)
.|+||+=....+..+.++.+.+ ++++.+||.
T Consensus 75 ~d~vi~~v~~~~~~~v~~~l~~~l~~~~~iv~ 106 (316)
T 2ew2_A 75 VDLIIALTKAQQLDAMFKAIQPMITEKTYVLC 106 (316)
T ss_dssp CSEEEECSCHHHHHHHHHHHGGGCCTTCEEEE
T ss_pred CCEEEEEeccccHHHHHHHHHHhcCCCCEEEE
Confidence 9999997765556667766654 477877665
No 452
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=86.36 E-value=2 Score=35.09 Aligned_cols=79 Identities=19% Similarity=0.207 Sum_probs=57.7
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHH--HhcC--------
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEE--VMGE-------- 110 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~e--vL~~-------- 110 (223)
.-|.+|=.|.+.| .+.+++...+ ..+.+|+.++++++..+...+.++.. +-.+.++.+|..+ .+.+
T Consensus 8 ~~k~vlITGas~g-iG~~~a~~l~--~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (253)
T 3qiv_A 8 ENKVGIVTGSGGG-IGQAYAEALA--REGAAVVVADINAEAAEAVAKQIVAD-GGTAISVAVDVSDPESAKAMADRTLAE 83 (253)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHH--HTTCEEEEEESCHHHHHHHHHHHHHT-TCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCh-HHHHHHHHHH--HCCCEEEEEcCCHHHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4578999998877 3566555444 34679999999999999888888887 7668888888643 2222
Q ss_pred CCCccEEEEeCCC
Q 027409 111 LKGVDFLVVDCTS 123 (223)
Q Consensus 111 L~~fDfVFIDa~K 123 (223)
++++|.++.-|.-
T Consensus 84 ~g~id~li~~Ag~ 96 (253)
T 3qiv_A 84 FGGIDYLVNNAAI 96 (253)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 2479999988753
No 453
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=86.29 E-value=2.9 Score=34.06 Aligned_cols=91 Identities=11% Similarity=0.034 Sum_probs=56.5
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchH--HHhcC--CCCccE
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAE--EVMGE--LKGVDF 116 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~--evL~~--L~~fDf 116 (223)
..++|+=+|+ |..+. .+|......+- ++-+|.|++..+.++ . | ++++.||+. +.|.+ +...|.
T Consensus 8 ~~~~viI~G~--G~~G~--~la~~L~~~g~-v~vid~~~~~~~~~~-----~-~--~~~i~gd~~~~~~l~~a~i~~ad~ 74 (234)
T 2aef_A 8 KSRHVVICGW--SESTL--ECLRELRGSEV-FVLAEDENVRKKVLR-----S-G--ANFVHGDPTRVSDLEKANVRGARA 74 (234)
T ss_dssp --CEEEEESC--CHHHH--HHHHHSTTSEE-EEEESCGGGHHHHHH-----T-T--CEEEESCTTCHHHHHHTTCTTCSE
T ss_pred CCCEEEEECC--ChHHH--HHHHHHHhCCe-EEEEECCHHHHHHHh-----c-C--CeEEEcCCCCHHHHHhcCcchhcE
Confidence 3468998987 55344 45555544444 888999998766554 3 4 478899996 56653 568999
Q ss_pred EEEeCCCcccHHHH-HHhccCCCceEEEE
Q 027409 117 LVVDCTSKDFARVL-RFARFSNKGAVLAF 144 (223)
Q Consensus 117 VFIDa~K~~Y~~~f-~~~~~l~~GgvIV~ 144 (223)
|++=......-... ..++.+.+..-||+
T Consensus 75 vi~~~~~d~~n~~~~~~a~~~~~~~~iia 103 (234)
T 2aef_A 75 VIVDLESDSETIHCILGIRKIDESVRIIA 103 (234)
T ss_dssp EEECCSCHHHHHHHHHHHHHHCSSSEEEE
T ss_pred EEEcCCCcHHHHHHHHHHHHHCCCCeEEE
Confidence 99866543222222 34455566645554
No 454
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=86.22 E-value=1.5 Score=32.07 Aligned_cols=63 Identities=13% Similarity=0.076 Sum_probs=46.5
Q ss_pred cEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCccEEEEeCCCcc--cHHHHHHhc
Q 027409 70 ARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVDFLVVDCTSKD--FARVLRFAR 134 (223)
Q Consensus 70 g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fDfVFIDa~K~~--Y~~~f~~~~ 134 (223)
-+|.-+|.|+...+.-+..++.. |+.+. ...++.+.+..+ ..+|+|++|..-.. -.++++.++
T Consensus 4 ~~ILivdd~~~~~~~l~~~L~~~-g~~v~-~~~~~~~al~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~ 70 (138)
T 3c3m_A 4 YTILVVDDSPMIVDVFVTMLERG-GYRPI-TAFSGEECLEALNATPPDLVLLDIMMEPMDGWETLERIK 70 (138)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHT-TCEEE-EESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHH
T ss_pred ceEEEEeCCHHHHHHHHHHHHHc-CceEE-EeCCHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHH
Confidence 37889999999999999999998 98844 456666666544 36999999986543 244555553
No 455
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=86.20 E-value=4.7 Score=33.47 Aligned_cols=78 Identities=12% Similarity=0.067 Sum_probs=55.3
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCC------------chHHHHHHHHHHhhcCceEEEEecchHH--
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPD------------ERSRLAYVKAMYDVVGWVSEVIVRQAEE-- 106 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d------------~e~~~~Ar~~~~~a~G~~I~li~GdA~e-- 106 (223)
.-|.+|=.|.+.| ++.+++...+. .+.+|+.++++ .+..+.+...++.. |..+.++..|..+
T Consensus 9 ~gk~vlVTGas~g-IG~~ia~~l~~--~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~ 84 (287)
T 3pxx_A 9 QDKVVLVTGGARG-QGRSHAVKLAE--EGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT-GRKAYTAEVDVRDRA 84 (287)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHH--TTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT-TSCEEEEECCTTCHH
T ss_pred CCCEEEEeCCCCh-HHHHHHHHHHH--CCCeEEEEcccccccccccchhhhHHHHHHHHHHHhc-CCceEEEEccCCCHH
Confidence 4588999999877 45666655543 47799999987 67777777778777 7668888887542
Q ss_pred H----hcC----CCCccEEEEeCC
Q 027409 107 V----MGE----LKGVDFLVVDCT 122 (223)
Q Consensus 107 v----L~~----L~~fDfVFIDa~ 122 (223)
. +.+ ++++|.++.-|.
T Consensus 85 ~v~~~~~~~~~~~g~id~lv~nAg 108 (287)
T 3pxx_A 85 AVSRELANAVAEFGKLDVVVANAG 108 (287)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCC
Confidence 1 222 247999998775
No 456
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=86.15 E-value=5.2 Score=33.50 Aligned_cols=79 Identities=20% Similarity=0.262 Sum_probs=55.1
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHH--Hhc--------C
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEE--VMG--------E 110 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~e--vL~--------~ 110 (223)
.-|.||=.|.+.| .+..++.. ....+.+|+.+.++++..+...+.++.. |..+.++.+|..+ .+. .
T Consensus 43 ~~k~vlITGasgg-IG~~la~~--L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 118 (285)
T 2c07_A 43 ENKVALVTGAGRG-IGREIAKM--LAKSVSHVICISRTQKSCDSVVDEIKSF-GYESSGYAGDVSKKEEISEVINKILTE 118 (285)
T ss_dssp SSCEEEEESTTSH-HHHHHHHH--HTTTSSEEEEEESSHHHHHHHHHHHHTT-TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcH-HHHHHHHH--HHHcCCEEEEEcCCHHHHHHHHHHHHhc-CCceeEEECCCCCHHHHHHHHHHHHHh
Confidence 3478999998866 45655544 4445778988999988888777778776 6667888887532 121 2
Q ss_pred CCCccEEEEeCCC
Q 027409 111 LKGVDFLVVDCTS 123 (223)
Q Consensus 111 L~~fDfVFIDa~K 123 (223)
++++|.|+.-|.-
T Consensus 119 ~~~id~li~~Ag~ 131 (285)
T 2c07_A 119 HKNVDILVNNAGI 131 (285)
T ss_dssp CSCCCEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 2478999987753
No 457
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=85.90 E-value=3.9 Score=34.58 Aligned_cols=78 Identities=12% Similarity=0.129 Sum_probs=57.3
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHH------HhcC----
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEE------VMGE---- 110 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~e------vL~~---- 110 (223)
.-|.+|=.|.+.| ++.+++...+. .+.+|+-++++++..+...+.+... |-.+.++.+|..+ .+.+
T Consensus 27 ~~k~~lVTGas~G-IG~aia~~la~--~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 102 (283)
T 3v8b_A 27 PSPVALITGAGSG-IGRATALALAA--DGVTVGALGRTRTEVEEVADEIVGA-GGQAIALEADVSDELQMRNAVRDLVLK 102 (283)
T ss_dssp CCCEEEEESCSSH-HHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHHHTTT-TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4588999998877 45666655443 4789999999999988888888877 7667888887642 1222
Q ss_pred CCCccEEEEeCC
Q 027409 111 LKGVDFLVVDCT 122 (223)
Q Consensus 111 L~~fDfVFIDa~ 122 (223)
++++|.++.-|.
T Consensus 103 ~g~iD~lVnnAg 114 (283)
T 3v8b_A 103 FGHLDIVVANAG 114 (283)
T ss_dssp HSCCCEEEECCC
T ss_pred hCCCCEEEECCC
Confidence 247999998775
No 458
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=85.90 E-value=4.1 Score=33.68 Aligned_cols=41 Identities=22% Similarity=0.131 Sum_probs=25.2
Q ss_pred cCCCeEEEEccCcchHHHHH--HHHHhcCCCCcEEEEEeCCchH
Q 027409 40 WNAKLIVEAWTHGGPITTSI--GLAIAARHTCARHVCIVPDERS 81 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl--~la~A~~~~~g~i~TIE~d~e~ 81 (223)
.+++.|.=.++-.|.+-||+ .||.+.. .+-++.-||.|+..
T Consensus 25 ~~~~vI~v~s~kGGvGKTT~a~~LA~~la-~g~~VlliD~D~~~ 67 (267)
T 3k9g_A 25 KKPKIITIASIKGGVGKSTSAIILATLLS-KNNKVLLIDMDTQA 67 (267)
T ss_dssp -CCEEEEECCSSSSSCHHHHHHHHHHHHT-TTSCEEEEEECTTC
T ss_pred CCCeEEEEEeCCCCchHHHHHHHHHHHHH-CCCCEEEEECCCCC
Confidence 34555555565555443444 4554445 56789999999875
No 459
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=85.89 E-value=2.5 Score=36.13 Aligned_cols=78 Identities=15% Similarity=0.095 Sum_probs=57.3
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchH----------HHhcC
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAE----------EVMGE 110 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~----------evL~~ 110 (223)
+=|.+|=-|.+.| ++.+++.+.+. .|++|+-.+++++..+.+.+.+.+. |.++..+..|.. ++..+
T Consensus 8 ~gKvalVTGas~G-IG~aia~~la~--~Ga~Vvi~~~~~~~~~~~~~~l~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (255)
T 4g81_D 8 TGKTALVTGSARG-LGFAYAEGLAA--AGARVILNDIRATLLAESVDTLTRK-GYDAHGVAFDVTDELAIEAAFSKLDAE 83 (255)
T ss_dssp TTCEEEETTCSSH-HHHHHHHHHHH--TTCEEEECCSCHHHHHHHHHHHHHT-TCCEEECCCCTTCHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHH--CCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 3467777788877 35666665553 4789999999999999999999988 877777777742 23334
Q ss_pred CCCccEEEEeCC
Q 027409 111 LKGVDFLVVDCT 122 (223)
Q Consensus 111 L~~fDfVFIDa~ 122 (223)
+++.|.++.-|.
T Consensus 84 ~G~iDiLVNNAG 95 (255)
T 4g81_D 84 GIHVDILINNAG 95 (255)
T ss_dssp TCCCCEEEECCC
T ss_pred CCCCcEEEECCC
Confidence 467999987664
No 460
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=85.84 E-value=3.2 Score=34.90 Aligned_cols=79 Identities=16% Similarity=0.193 Sum_probs=57.5
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHH------Hhc----
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEE------VMG---- 109 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~e------vL~---- 109 (223)
.+-|.+|=.|.+.| ++.+++...+. .+.+|+.++++++..+...+.++.. |..+.++..|..+ .+.
T Consensus 26 l~~k~~lVTGas~G-IG~aia~~la~--~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~ 101 (270)
T 3ftp_A 26 LDKQVAIVTGASRG-IGRAIALELAR--RGAMVIGTATTEAGAEGIGAAFKQA-GLEGRGAVLNVNDATAVDALVESTLK 101 (270)
T ss_dssp TTTCEEEETTCSSH-HHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHHHHHH-TCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCH-HHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence 45688998898877 45666655543 4779999999999999888889888 7777777777532 122
Q ss_pred CCCCccEEEEeCC
Q 027409 110 ELKGVDFLVVDCT 122 (223)
Q Consensus 110 ~L~~fDfVFIDa~ 122 (223)
++++.|.++.-|.
T Consensus 102 ~~g~iD~lvnnAg 114 (270)
T 3ftp_A 102 EFGALNVLVNNAG 114 (270)
T ss_dssp HHSCCCEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 2247999998775
No 461
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=85.81 E-value=1.6 Score=31.98 Aligned_cols=63 Identities=13% Similarity=0.098 Sum_probs=47.1
Q ss_pred cEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCccEEEEeCCCcc--cHHHHHHhc
Q 027409 70 ARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVDFLVVDCTSKD--FARVLRFAR 134 (223)
Q Consensus 70 g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fDfVFIDa~K~~--Y~~~f~~~~ 134 (223)
.+|.-+|.|+...+.-+..+++. |+.+. ...++.+.+..+ ..+|+||+|..-.. -.++++.++
T Consensus 5 ~~iLivdd~~~~~~~l~~~L~~~-g~~v~-~~~~~~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~lr 71 (136)
T 3t6k_A 5 HTLLIVDDDDTVAEMLELVLRGA-GYEVR-RAASGEEALQQIYKNLPDALICDVLLPGIDGYTLCKRVR 71 (136)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHT-TCEEE-EESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHHHHHC-CCEEE-EeCCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHH
Confidence 57999999999999999999998 99854 456777766655 47999999986432 344555553
No 462
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=85.80 E-value=1.8 Score=31.65 Aligned_cols=65 Identities=11% Similarity=0.115 Sum_probs=47.4
Q ss_pred cEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCccEEEEeCCCc--ccHHHHHHhccC
Q 027409 70 ARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVDFLVVDCTSK--DFARVLRFARFS 136 (223)
Q Consensus 70 g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fDfVFIDa~K~--~Y~~~f~~~~~l 136 (223)
.+|.-+|.|+...+.-+..++.. |+.|. ...++.+.+..+ ..+|+||+|..-. .-.++++.++..
T Consensus 5 ~~ILivdd~~~~~~~l~~~L~~~-g~~v~-~~~~~~~a~~~l~~~~~dlvllD~~l~~~~g~~l~~~l~~~ 73 (137)
T 3cfy_A 5 PRVLLVEDSTSLAILYKQYVKDE-PYDIF-HVETGRDAIQFIERSKPQLIILDLKLPDMSGEDVLDWINQN 73 (137)
T ss_dssp CEEEEECSCTTHHHHHHHHTTTS-SSEEE-EESSHHHHHHHHHHHCCSEEEECSBCSSSBHHHHHHHHHHT
T ss_pred ceEEEEeCCHHHHHHHHHHHHhc-CceEE-EeCCHHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhc
Confidence 47999999999999999999888 88754 556776666655 3799999998643 234555555433
No 463
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=85.75 E-value=4.3 Score=33.91 Aligned_cols=79 Identities=9% Similarity=0.029 Sum_probs=57.7
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCc---eEEEEecchHH------HhcC-
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGW---VSEVIVRQAEE------VMGE- 110 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~---~I~li~GdA~e------vL~~- 110 (223)
.-|.+|=.|.+.| ++++++...+. .+.+|+-++++++..+.+.+.+++. |- .+.++.+|..+ .+.+
T Consensus 10 ~~k~vlVTGas~g-IG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 85 (281)
T 3svt_A 10 QDRTYLVTGGGSG-IGKGVAAGLVA--AGASVMIVGRNPDKLAGAVQELEAL-GANGGAIRYEPTDITNEDETARAVDAV 85 (281)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHTT-CCSSCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHHh-CCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence 4578999998877 46666655543 4779999999999999988888887 65 48888888642 1222
Q ss_pred ---CCCccEEEEeCCC
Q 027409 111 ---LKGVDFLVVDCTS 123 (223)
Q Consensus 111 ---L~~fDfVFIDa~K 123 (223)
+++.|.++.-|.-
T Consensus 86 ~~~~g~id~lv~nAg~ 101 (281)
T 3svt_A 86 TAWHGRLHGVVHCAGG 101 (281)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCc
Confidence 2478999987763
No 464
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=85.53 E-value=2.1 Score=37.46 Aligned_cols=96 Identities=13% Similarity=0.028 Sum_probs=57.4
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce--EEEEecchHHHhcCC--C-Cc
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV--SEVIVRQAEEVMGEL--K-GV 114 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~--I~li~GdA~evL~~L--~-~f 114 (223)
..-++||=+|.+ |.+..++.+|++. .+.+|+.++.++++.+.|++ . |.. ++.... ..+.+.++ + .+
T Consensus 185 ~~g~~VlV~GaG-~vG~~avqlak~~--~Ga~Vi~~~~~~~~~~~~~~----l-Ga~~vi~~~~~-~~~~v~~~~~g~g~ 255 (359)
T 1h2b_A 185 YPGAYVAIVGVG-GLGHIAVQLLKVM--TPATVIALDVKEEKLKLAER----L-GADHVVDARRD-PVKQVMELTRGRGV 255 (359)
T ss_dssp CTTCEEEEECCS-HHHHHHHHHHHHH--CCCEEEEEESSHHHHHHHHH----T-TCSEEEETTSC-HHHHHHHHTTTCCE
T ss_pred CCCCEEEEECCC-HHHHHHHHHHHHc--CCCeEEEEeCCHHHHHHHHH----h-CCCEEEeccch-HHHHHHHHhCCCCC
Confidence 345789999984 7655666776543 15689999999998887764 4 654 332222 22334333 2 69
Q ss_pred cEEEEeCCCcccHHHHHHhccCCCceEEEEeC
Q 027409 115 DFLVVDCTSKDFARVLRFARFSNKGAVLAFKN 146 (223)
Q Consensus 115 DfVFIDa~K~~Y~~~f~~~~~l~~GgvIV~DN 146 (223)
|+|| |+.-......++....+ +||.++.=.
T Consensus 256 Dvvi-d~~G~~~~~~~~~~~~~-~~G~~v~~g 285 (359)
T 1h2b_A 256 NVAM-DFVGSQATVDYTPYLLG-RMGRLIIVG 285 (359)
T ss_dssp EEEE-ESSCCHHHHHHGGGGEE-EEEEEEECC
T ss_pred cEEE-ECCCCchHHHHHHHhhc-CCCEEEEEe
Confidence 9886 66432211155543223 788877643
No 465
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=85.51 E-value=8 Score=33.89 Aligned_cols=79 Identities=14% Similarity=0.128 Sum_probs=50.4
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhh--cCceEEEEecchHHHhcCCCCccEEE
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDV--VGWVSEVIVRQAEEVMGELKGVDFLV 118 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a--~G~~I~li~GdA~evL~~L~~fDfVF 118 (223)
+..+|.=||+ |+.++++++..+..+--..|+-+|+++++++.-..-+.+. +...+++..++ .+. +..-|+|+
T Consensus 4 ~~~KI~IiGa--G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~-~~a---~~~aDvVi 77 (318)
T 1ez4_A 4 NHQKVVLVGD--GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGE-YSD---CKDADLVV 77 (318)
T ss_dssp TBCEEEEECC--SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECC-GGG---GTTCSEEE
T ss_pred CCCEEEEECC--CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEECC-HHH---hCCCCEEE
Confidence 3468999997 6667777776655433458999999998877534444443 13226666544 232 45789999
Q ss_pred EeCCCcc
Q 027409 119 VDCTSKD 125 (223)
Q Consensus 119 IDa~K~~ 125 (223)
+=+...+
T Consensus 78 i~ag~~~ 84 (318)
T 1ez4_A 78 ITAGAPQ 84 (318)
T ss_dssp ECCCC--
T ss_pred ECCCCCC
Confidence 9886443
No 466
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=85.49 E-value=7.6 Score=33.74 Aligned_cols=76 Identities=16% Similarity=0.111 Sum_probs=46.1
Q ss_pred eEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhh--cCceEEEEecchHHHhcCCCCccEEEEeC
Q 027409 44 LIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDV--VGWVSEVIVRQAEEVMGELKGVDFLVVDC 121 (223)
Q Consensus 44 ~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a--~G~~I~li~GdA~evL~~L~~fDfVFIDa 121 (223)
+|.=||+ |..+++++...+.......|+-+|+++++.+.....+.+. +....++...| .+. +...|+||+=+
T Consensus 2 kI~VIGa--G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d-~~~---~~~aDvViiav 75 (319)
T 1a5z_A 2 KIGIVGL--GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD-YAD---LKGSDVVIVAA 75 (319)
T ss_dssp EEEEECC--SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC-GGG---GTTCSEEEECC
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeCC-HHH---hCCCCEEEEcc
Confidence 5777887 5566777665544322348999999998877655544432 01113444445 233 35799999977
Q ss_pred CCcc
Q 027409 122 TSKD 125 (223)
Q Consensus 122 ~K~~ 125 (223)
...+
T Consensus 76 ~~~~ 79 (319)
T 1a5z_A 76 GVPQ 79 (319)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 5433
No 467
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=85.45 E-value=6.1 Score=27.58 Aligned_cols=73 Identities=11% Similarity=0.140 Sum_probs=48.9
Q ss_pred cEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCccEEEEeCCCcc--cHHHHHHhccCCCceEEEE
Q 027409 70 ARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVDFLVVDCTSKD--FARVLRFARFSNKGAVLAF 144 (223)
Q Consensus 70 g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fDfVFIDa~K~~--Y~~~f~~~~~l~~GgvIV~ 144 (223)
.+|.-+|.++...+.-+..++.. |+.+. ...++.+.+..+ ..+|+|++|..-.. -.++.+.++..++-.+|+.
T Consensus 3 ~~ilivdd~~~~~~~l~~~L~~~-~~~v~-~~~~~~~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ii~~ 79 (122)
T 1zgz_A 3 HHIVIVEDEPVTQARLQSYFTQE-GYTVS-VTASGAGLREIMQNQSVDLILLDINLPDENGLMLTRALRERSTVGIILV 79 (122)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHT-TCEEE-EESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEEE
T ss_pred cEEEEEECCHHHHHHHHHHHHHC-CCeEE-EecCHHHHHHHHhcCCCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEE
Confidence 37888999999999999999988 98754 445665655443 36999999986433 2344554543333344443
No 468
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=85.44 E-value=3 Score=29.02 Aligned_cols=72 Identities=11% Similarity=0.116 Sum_probs=48.5
Q ss_pred EEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCccEEEEeCCCcc--cHHHHHHhccCCCceEEEE
Q 027409 71 RHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVDFLVVDCTSKD--FARVLRFARFSNKGAVLAF 144 (223)
Q Consensus 71 ~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fDfVFIDa~K~~--Y~~~f~~~~~l~~GgvIV~ 144 (223)
+|.-+|.++...+.-+..++.. |+.+. ...++.+.+..+ ..+|+||+|..-.. -.++++.++..++--+|+.
T Consensus 3 ~ilivdd~~~~~~~l~~~l~~~-~~~v~-~~~~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~ii~~ 78 (120)
T 2a9o_A 3 KILIVDDEKPISDIIKFNMTKE-GYEVV-TAFNGREALEQFEAEQPDIIILDLMLPEIDGLEVAKTIRKTSSVPILML 78 (120)
T ss_dssp EEEEECSCHHHHHHHHHHHHHT-TCEEE-EESSHHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHHCCCCEEEE
T ss_pred eEEEEcCCHHHHHHHHHHHHhc-CcEEE-EecCHHHHHHHHHhCCCCEEEEeccCCCCCHHHHHHHHHhCCCCCEEEE
Confidence 6788999999888889999998 98854 456666666554 37999999986433 2344554432233334443
No 469
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=85.43 E-value=2.9 Score=35.65 Aligned_cols=79 Identities=19% Similarity=0.098 Sum_probs=55.5
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHH------Hh----c
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEE------VM----G 109 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~e------vL----~ 109 (223)
..-|.||=.|.+.| ++.+++...+. .+.+|+.++++++..+...+.++.. |..+.++.+|..+ .+ .
T Consensus 32 l~~k~vlVTGas~g-IG~aia~~L~~--~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~ 107 (291)
T 3cxt_A 32 LKGKIALVTGASYG-IGFAIASAYAK--AGATIVFNDINQELVDRGMAAYKAA-GINAHGYVCDVTDEDGIQAMVAQIES 107 (291)
T ss_dssp CTTCEEEEETCSSH-HHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcH-HHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHH
Confidence 34588999998866 45666555443 4679999999998888777778776 6557777777532 12 2
Q ss_pred CCCCccEEEEeCC
Q 027409 110 ELKGVDFLVVDCT 122 (223)
Q Consensus 110 ~L~~fDfVFIDa~ 122 (223)
.++.+|.++.-|.
T Consensus 108 ~~g~iD~lvnnAg 120 (291)
T 3cxt_A 108 EVGIIDILVNNAG 120 (291)
T ss_dssp HTCCCCEEEECCC
T ss_pred HcCCCcEEEECCC
Confidence 2346999998775
No 470
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=85.42 E-value=5.2 Score=33.42 Aligned_cols=91 Identities=13% Similarity=0.121 Sum_probs=54.5
Q ss_pred CeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCCCCccEEEEeCC
Q 027409 43 KLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGELKGVDFLVVDCT 122 (223)
Q Consensus 43 k~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L~~fDfVFIDa~ 122 (223)
++|.=||+ |..+++++...+......+|+.+|++++..+.++ +. |.... ...|..+.+.. ..|+||+=.-
T Consensus 2 ~~I~iIG~--G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~----~~-g~~~~-~~~~~~~~~~~--~aDvVilavp 71 (281)
T 2g5c_A 2 QNVLIVGV--GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV----DL-GIIDE-GTTSIAKVEDF--SPDFVMLSSP 71 (281)
T ss_dssp CEEEEESC--SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH----HT-TSCSE-EESCGGGGGGT--CCSEEEECSC
T ss_pred cEEEEEec--CHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH----HC-CCccc-ccCCHHHHhcC--CCCEEEEcCC
Confidence 46788886 4556666555443221237999999998776554 45 65311 12343343331 6899998775
Q ss_pred CcccHHHHHHhc-cCCCceEEE
Q 027409 123 SKDFARVLRFAR-FSNKGAVLA 143 (223)
Q Consensus 123 K~~Y~~~f~~~~-~l~~GgvIV 143 (223)
.....+.++.+. .+++|.+|+
T Consensus 72 ~~~~~~v~~~l~~~l~~~~iv~ 93 (281)
T 2g5c_A 72 VRTFREIAKKLSYILSEDATVT 93 (281)
T ss_dssp HHHHHHHHHHHHHHSCTTCEEE
T ss_pred HHHHHHHHHHHHhhCCCCcEEE
Confidence 555566666554 357777554
No 471
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=85.24 E-value=3.7 Score=30.26 Aligned_cols=64 Identities=13% Similarity=0.123 Sum_probs=43.7
Q ss_pred CcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC---CCccEEEEeCCCcc--cHHHHHHhcc
Q 027409 69 CARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL---KGVDFLVVDCTSKD--FARVLRFARF 135 (223)
Q Consensus 69 ~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L---~~fDfVFIDa~K~~--Y~~~f~~~~~ 135 (223)
.-+|.-+|.|+...+.-+..++ . |+.+. ...++.+.+..+ .+||+||+|..-.. -.++++.++.
T Consensus 4 ~~~ILivdd~~~~~~~l~~~L~-~-~~~v~-~~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~g~~~~~~l~~ 72 (151)
T 3kcn_A 4 NERILLVDDDYSLLNTLKRNLS-F-DFEVT-TCESGPEALACIKKSDPFSVIMVDMRMPGMEGTEVIQKARL 72 (151)
T ss_dssp CCEEEEECSCHHHHHHHHHHHT-T-TSEEE-EESSHHHHHHHHHHSCCCSEEEEESCCSSSCHHHHHHHHHH
T ss_pred CCeEEEEeCCHHHHHHHHHHhc-c-CceEE-EeCCHHHHHHHHHcCCCCCEEEEeCCCCCCcHHHHHHHHHh
Confidence 3589999999998888888885 4 77644 445665555544 46999999986433 3455555543
No 472
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=85.24 E-value=6.5 Score=32.33 Aligned_cols=78 Identities=14% Similarity=0.100 Sum_probs=55.6
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHH------Hh----cC
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEE------VM----GE 110 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~e------vL----~~ 110 (223)
.-|+||=.|.+.| ++.+++...+. .+.+|+.++++++..+...+.++.. |..+.++.+|..+ .+ ..
T Consensus 8 ~~k~vlVTGas~g-iG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (260)
T 2ae2_A 8 EGCTALVTGGSRG-IGYGIVEELAS--LGASVYTCSRNQKELNDCLTQWRSK-GFKVEASVCDLSSRSERQELMNTVANH 83 (260)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHT-TCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4578998998766 46666555443 4679999999999888777778776 7667888887532 11 22
Q ss_pred C-CCccEEEEeCC
Q 027409 111 L-KGVDFLVVDCT 122 (223)
Q Consensus 111 L-~~fDfVFIDa~ 122 (223)
+ +++|.++.-|.
T Consensus 84 ~~g~id~lv~~Ag 96 (260)
T 2ae2_A 84 FHGKLNILVNNAG 96 (260)
T ss_dssp TTTCCCEEEECCC
T ss_pred cCCCCCEEEECCC
Confidence 3 47899998775
No 473
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=85.23 E-value=3.1 Score=29.79 Aligned_cols=63 Identities=14% Similarity=0.133 Sum_probs=46.7
Q ss_pred cEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCccEEEEeCCCcc--cHHHHHHhc
Q 027409 70 ARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVDFLVVDCTSKD--FARVLRFAR 134 (223)
Q Consensus 70 g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fDfVFIDa~K~~--Y~~~f~~~~ 134 (223)
.+|.-+|.|+...+.-+..++.. |+.+. ...++.+.+..+ ..+|+|++|..-.. -.+++..++
T Consensus 4 ~~ilivdd~~~~~~~l~~~L~~~-g~~v~-~~~~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~ 70 (136)
T 1mvo_A 4 KKILVVDDEESIVTLLQYNLERS-GYDVI-TASDGEEALKKAETEKPDLIVLDVMLPKLDGIEVCKQLR 70 (136)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHT-TCEEE-EESSHHHHHHHHHHHCCSEEEEESSCSSSCHHHHHHHHH
T ss_pred CEEEEEECCHHHHHHHHHHHHHC-CcEEE-EecCHHHHHHHHhhcCCCEEEEecCCCCCCHHHHHHHHH
Confidence 57889999999999999999998 98854 466777766655 37999999986543 244555554
No 474
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=85.20 E-value=1.4 Score=34.32 Aligned_cols=64 Identities=9% Similarity=0.053 Sum_probs=47.8
Q ss_pred CcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCccEEEEeCCCc--ccHHHHHHhc
Q 027409 69 CARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVDFLVVDCTSK--DFARVLRFAR 134 (223)
Q Consensus 69 ~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fDfVFIDa~K~--~Y~~~f~~~~ 134 (223)
.-+|.-+|.|+...+.-+..+++. |+.| ....++.+.+..+ ..+|+|++|..-. +=.++++.++
T Consensus 7 ~~~iLivdd~~~~~~~l~~~L~~~-g~~v-~~~~~~~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~ 74 (184)
T 3rqi_A 7 DKNFLVIDDNEVFAGTLARGLERR-GYAV-RQAHNKDEALKLAGAEKFEFITVXLHLGNDSGLSLIAPLC 74 (184)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHT-TCEE-EEECSHHHHHHHHTTSCCSEEEECSEETTEESHHHHHHHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHHC-CCEE-EEeCCHHHHHHHHhhCCCCEEEEeccCCCccHHHHHHHHH
Confidence 358999999999999999999998 9985 4566776666554 3799999997532 2345555554
No 475
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=85.20 E-value=0.33 Score=37.16 Aligned_cols=53 Identities=9% Similarity=0.182 Sum_probs=41.4
Q ss_pred CcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCccEEEEeCC
Q 027409 69 CARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVDFLVVDCT 122 (223)
Q Consensus 69 ~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fDfVFIDa~ 122 (223)
.-||.-+|-|+...+.-+..+++. |+++.-...++.|.|..+ .+||+|++|-.
T Consensus 8 ~~rILiVdD~~~~~~~l~~~L~~~-G~~v~~~a~~g~eAl~~~~~~~~DlvllDi~ 62 (123)
T 2lpm_A 8 RLRVLVVEDESMIAMLIEDTLCEL-GHEVAATASRMQEALDIARKGQFDIAIIDVN 62 (123)
T ss_dssp CCCEEEESSSTTTSHHHHHHHHHH-CCCCCBCSCCHHHHHHHHHHCCSSEEEECSS
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHhCCCCEEEEecC
Confidence 357999999999999999999999 998433345555555444 47999999986
No 476
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=85.20 E-value=3 Score=34.52 Aligned_cols=78 Identities=14% Similarity=0.155 Sum_probs=55.4
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHH--H----h----cC
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEE--V----M----GE 110 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~e--v----L----~~ 110 (223)
.-|.+|=.|.+.| ++.+++...+. .+.+|+.++++++..+...+.++.. |..+.++.+|..+ . + ..
T Consensus 6 ~~k~vlVTGas~g-IG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (262)
T 1zem_A 6 NGKVCLVTGAGGN-IGLATALRLAE--EGTAIALLDMNREALEKAEASVREK-GVEARSYVCDVTSEEAVIGTVDSVVRD 81 (262)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHTT-TSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 4578999998866 45665555443 4678999999998888877778776 7667788887532 1 1 12
Q ss_pred CCCccEEEEeCC
Q 027409 111 LKGVDFLVVDCT 122 (223)
Q Consensus 111 L~~fDfVFIDa~ 122 (223)
++++|.++.-|.
T Consensus 82 ~g~id~lv~nAg 93 (262)
T 1zem_A 82 FGKIDFLFNNAG 93 (262)
T ss_dssp HSCCCEEEECCC
T ss_pred hCCCCEEEECCC
Confidence 247899998764
No 477
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=85.18 E-value=6.9 Score=33.13 Aligned_cols=97 Identities=8% Similarity=-0.024 Sum_probs=60.0
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhh------cC--c---------e-EEEEec
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDV------VG--W---------V-SEVIVR 102 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a------~G--~---------~-I~li~G 102 (223)
..++|.=||+| ..+++|+...+.. +-.|+-.|++++..+.+++.+++. .| + . ++. ..
T Consensus 3 ~~~kV~VIGaG--~mG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~ 77 (283)
T 4e12_A 3 GITNVTVLGTG--VLGSQIAFQTAFH--GFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SD 77 (283)
T ss_dssp SCCEEEEECCS--HHHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ES
T ss_pred CCCEEEEECCC--HHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eC
Confidence 45789999885 4667776655433 568999999999999888875432 01 0 0 222 23
Q ss_pred chHHHhcCCCCccEEEEeCCCcc---cHHHHHHhc-cCCCceEEEEeCC
Q 027409 103 QAEEVMGELKGVDFLVVDCTSKD---FARVLRFAR-FSNKGAVLAFKNA 147 (223)
Q Consensus 103 dA~evL~~L~~fDfVFIDa~K~~---Y~~~f~~~~-~l~~GgvIV~DNv 147 (223)
|..+.+ ...|+|++=. +++ -..+|+.+. .++++.+| ++|.
T Consensus 78 ~~~~~~---~~aDlVi~av-~~~~~~~~~v~~~l~~~~~~~~il-~s~t 121 (283)
T 4e12_A 78 DLAQAV---KDADLVIEAV-PESLDLKRDIYTKLGELAPAKTIF-ATNS 121 (283)
T ss_dssp CHHHHT---TTCSEEEECC-CSCHHHHHHHHHHHHHHSCTTCEE-EECC
T ss_pred CHHHHh---ccCCEEEEec-cCcHHHHHHHHHHHHhhCCCCcEE-EECC
Confidence 333333 3689988744 553 456666554 45777765 5554
No 478
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=85.17 E-value=5.1 Score=33.25 Aligned_cols=78 Identities=17% Similarity=0.146 Sum_probs=56.1
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCc--eEEEEecchH------HHhcCCC
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGW--VSEVIVRQAE------EVMGELK 112 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~--~I~li~GdA~------evL~~L~ 112 (223)
+-|.+|=.|.+.| ++.+++...+. .+.+|+-++++++..+...+.+... +. .+..+.+|.. +++.+++
T Consensus 9 ~~k~~lVTGas~g-IG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~g 84 (267)
T 3t4x_A 9 KGKTALVTGSTAG-IGKAIATSLVA--EGANVLINGRREENVNETIKEIRAQ-YPDAILQPVVADLGTEQGCQDVIEKYP 84 (267)
T ss_dssp TTCEEEETTCSSH-HHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHHHHHH-CTTCEEEEEECCTTSHHHHHHHHHHCC
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhh-CCCceEEEEecCCCCHHHHHHHHHhcC
Confidence 4578998888866 45666555443 4789999999999988888888766 42 2777777753 2344456
Q ss_pred CccEEEEeCC
Q 027409 113 GVDFLVVDCT 122 (223)
Q Consensus 113 ~fDfVFIDa~ 122 (223)
+.|.++.-|.
T Consensus 85 ~id~lv~nAg 94 (267)
T 3t4x_A 85 KVDILINNLG 94 (267)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 8999998775
No 479
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=85.12 E-value=1.4 Score=32.68 Aligned_cols=64 Identities=20% Similarity=0.241 Sum_probs=44.9
Q ss_pred CcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCccEEEEeCCCcc--cHHHHHHhc
Q 027409 69 CARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVDFLVVDCTSKD--FARVLRFAR 134 (223)
Q Consensus 69 ~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fDfVFIDa~K~~--Y~~~f~~~~ 134 (223)
.-+|.-+|.|+...+.-+..+++. |+.+. ...++.+.+..+ ..||+||+|..-.. -.++++.++
T Consensus 14 ~~~iLivdd~~~~~~~l~~~L~~~-g~~v~-~~~~~~~al~~~~~~~~dlvl~D~~mp~~~g~~~~~~lr 81 (143)
T 3m6m_D 14 SMRMLVADDHEANRMVLQRLLEKA-GHKVL-CVNGAEQVLDAMAEEDYDAVIVDLHMPGMNGLDMLKQLR 81 (143)
T ss_dssp -CEEEEECSSHHHHHHHHHHHHC---CEEE-EESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHH
T ss_pred cceEEEEeCCHHHHHHHHHHHHHc-CCeEE-EeCCHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHH
Confidence 358999999999999999999998 98854 356666666554 47999999986433 345555553
No 480
>1s8n_A Putative antiterminator; RV1626, structural genomics, transcriptional antiterminator, component system, PSI; 1.48A {Mycobacterium tuberculosis} SCOP: c.23.1.1 PDB: 1sd5_A
Probab=85.01 E-value=3.2 Score=32.47 Aligned_cols=74 Identities=9% Similarity=0.085 Sum_probs=52.5
Q ss_pred cEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCccEEEEeCCCc--ccHHHHHHhccCCCceEEEE
Q 027409 70 ARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVDFLVVDCTSK--DFARVLRFARFSNKGAVLAF 144 (223)
Q Consensus 70 g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fDfVFIDa~K~--~Y~~~f~~~~~l~~GgvIV~ 144 (223)
.+|.-+|.|+...+.-+..++.. |+.+.....++.+.+..+ ..+|+||+|..-. +-.+++..++...+.-+|+.
T Consensus 14 ~~iLivdd~~~~~~~l~~~L~~~-g~~v~~~~~~~~~al~~~~~~~~dlvi~D~~~p~~~g~~~~~~l~~~~~~pii~l 91 (205)
T 1s8n_A 14 RRVLIAEDEALIRMDLAEMLREE-GYEIVGEAGDGQEAVELAELHKPDLVIMDVKMPRRDGIDAASEIASKRIAPIVVL 91 (205)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHCCSEEEEESSCSSSCHHHHHHHHHHTTCSCEEEE
T ss_pred ccEEEEECCHHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhhcCCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEE
Confidence 58999999999999999999998 998554667777766655 3799999998643 33455555543323344443
No 481
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=84.98 E-value=4.2 Score=33.88 Aligned_cols=78 Identities=24% Similarity=0.193 Sum_probs=56.4
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHh-hcCceEEEEecchHH------Hhc----
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYD-VVGWVSEVIVRQAEE------VMG---- 109 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~-a~G~~I~li~GdA~e------vL~---- 109 (223)
.-|.+|=.|.+.| ++.+++...+. .+.+|+-++++++..+.+.+.+.+ . |..+.++..|..+ .+.
T Consensus 19 ~~k~vlVTGas~g-IG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~ 94 (266)
T 4egf_A 19 DGKRALITGATKG-IGADIARAFAA--AGARLVLSGRDVSELDAARRALGEQF-GTDVHTVAIDLAEPDAPAELARRAAE 94 (266)
T ss_dssp TTCEEEETTTTSH-HHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 4588999998877 45666555443 478999999999998888888876 5 6668888887642 122
Q ss_pred CCCCccEEEEeCC
Q 027409 110 ELKGVDFLVVDCT 122 (223)
Q Consensus 110 ~L~~fDfVFIDa~ 122 (223)
++++.|.++.-|.
T Consensus 95 ~~g~id~lv~nAg 107 (266)
T 4egf_A 95 AFGGLDVLVNNAG 107 (266)
T ss_dssp HHTSCSEEEEECC
T ss_pred HcCCCCEEEECCC
Confidence 2247999998775
No 482
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=84.94 E-value=4.6 Score=35.24 Aligned_cols=92 Identities=17% Similarity=0.167 Sum_probs=55.8
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC-CCccEEEE
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL-KGVDFLVV 119 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L-~~fDfVFI 119 (223)
.-.+||-+|+ .|.+..++.+|++. +.+|+.++.++++.+.+++ +. |...-+-..+ .+.+.++ +.+|+||
T Consensus 180 ~g~~VlV~Ga-G~vG~~a~qlak~~---Ga~Vi~~~~~~~~~~~~~~---~l-Ga~~vi~~~~-~~~~~~~~~g~D~vi- 249 (357)
T 2cf5_A 180 PGLRGGILGL-GGVGHMGVKIAKAM---GHHVTVISSSNKKREEALQ---DL-GADDYVIGSD-QAKMSELADSLDYVI- 249 (357)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHH---TCEEEEEESSTTHHHHHHT---TS-CCSCEEETTC-HHHHHHSTTTEEEEE-
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHC---CCeEEEEeCChHHHHHHHH---Hc-CCceeecccc-HHHHHHhcCCCCEEE-
Confidence 4468999996 46655666776653 5799999999988776652 34 6541111223 2333333 4799886
Q ss_pred eCCCc--ccHHHHHHhccCCCceEEEEe
Q 027409 120 DCTSK--DFARVLRFARFSNKGAVLAFK 145 (223)
Q Consensus 120 Da~K~--~Y~~~f~~~~~l~~GgvIV~D 145 (223)
|+.-. .... .++.+++||.++.=
T Consensus 250 d~~g~~~~~~~---~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 250 DTVPVHHALEP---YLSLLKLDGKLILM 274 (357)
T ss_dssp ECCCSCCCSHH---HHTTEEEEEEEEEC
T ss_pred ECCCChHHHHH---HHHHhccCCEEEEe
Confidence 65432 2233 34556788888753
No 483
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=84.77 E-value=8 Score=33.89 Aligned_cols=91 Identities=19% Similarity=0.156 Sum_probs=53.6
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC-CCccEEEE
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL-KGVDFLVV 119 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L-~~fDfVFI 119 (223)
.-++||-+|+ .|.+..++.+|.+ .+.+|+.++.++++.+.+++ +. |....+-..+ .+.+.++ +.+|+||
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~~---~Ga~Vi~~~~~~~~~~~~~~---~l-Ga~~v~~~~~-~~~~~~~~~~~D~vi- 256 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAKA---FGSKVTVISTSPSKKEEALK---NF-GADSFLVSRD-QEQMQAAAGTLDGII- 256 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHH---TTCEEEEEESCGGGHHHHHH---TS-CCSEEEETTC-HHHHHHTTTCEEEEE-
T ss_pred CCCEEEEECC-CHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHH---hc-CCceEEeccC-HHHHHHhhCCCCEEE-
Confidence 3468999996 4654455566654 36799999999988776652 34 6541121222 2334333 4799886
Q ss_pred eCCC-c-ccHHHHHHhccCCCceEEEE
Q 027409 120 DCTS-K-DFARVLRFARFSNKGAVLAF 144 (223)
Q Consensus 120 Da~K-~-~Y~~~f~~~~~l~~GgvIV~ 144 (223)
|+.- . .....+ ..+++||.+|.
T Consensus 257 d~~g~~~~~~~~~---~~l~~~G~iv~ 280 (366)
T 1yqd_A 257 DTVSAVHPLLPLF---GLLKSHGKLIL 280 (366)
T ss_dssp ECCSSCCCSHHHH---HHEEEEEEEEE
T ss_pred ECCCcHHHHHHHH---HHHhcCCEEEE
Confidence 5533 2 344444 34466777765
No 484
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=84.57 E-value=2.3 Score=36.44 Aligned_cols=79 Identities=11% Similarity=0.103 Sum_probs=57.2
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCc-eEEEEecchHH--H----h----
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGW-VSEVIVRQAEE--V----M---- 108 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~-~I~li~GdA~e--v----L---- 108 (223)
..-|.||=.|.+.| ++.+++...+. .+.+|+.++++++..+.+.+.++.. |- .+.++.+|..+ . +
T Consensus 39 l~~k~vlVTGas~G-IG~aia~~la~--~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~ 114 (293)
T 3rih_A 39 LSARSVLVTGGTKG-IGRGIATVFAR--AGANVAVAARSPRELSSVTAELGEL-GAGNVIGVRLDVSDPGSCADAARTVV 114 (293)
T ss_dssp CTTCEEEETTTTSH-HHHHHHHHHHH--TTCEEEEEESSGGGGHHHHHHHTTS-SSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcH-HHHHHHHHHHH--CCCEEEEEECCHHHHHHHHHHHHhh-CCCcEEEEEEeCCCHHHHHHHHHHHH
Confidence 35688999898866 45666555443 4679999999999998888888877 63 38888888643 1 1
Q ss_pred cCCCCccEEEEeCC
Q 027409 109 GELKGVDFLVVDCT 122 (223)
Q Consensus 109 ~~L~~fDfVFIDa~ 122 (223)
.+++++|.++.-|.
T Consensus 115 ~~~g~iD~lvnnAg 128 (293)
T 3rih_A 115 DAFGALDVVCANAG 128 (293)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 22347899998775
No 485
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=84.48 E-value=3.8 Score=33.36 Aligned_cols=78 Identities=18% Similarity=0.103 Sum_probs=55.2
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHH--HhcC--------
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEE--VMGE-------- 110 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~e--vL~~-------- 110 (223)
.-|.||=.|.+.| .++.++...+. .+.+|+.++++++..+...+.++.. |..++++.+|..+ .+.+
T Consensus 12 ~~k~vlItGasgg-iG~~la~~l~~--~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (260)
T 3awd_A 12 DNRVAIVTGGAQN-IGLACVTALAE--AGARVIIADLDEAMATKAVEDLRME-GHDVSSVVMDVTNTESVQNAVRSVHEQ 87 (260)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCch-HHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 4588999998866 45665554443 4679999999998887777778776 6668888888642 2222
Q ss_pred CCCccEEEEeCC
Q 027409 111 LKGVDFLVVDCT 122 (223)
Q Consensus 111 L~~fDfVFIDa~ 122 (223)
++++|.|+.-|.
T Consensus 88 ~~~id~vi~~Ag 99 (260)
T 3awd_A 88 EGRVDILVACAG 99 (260)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 136899998775
No 486
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=84.45 E-value=2.7 Score=35.39 Aligned_cols=79 Identities=16% Similarity=0.175 Sum_probs=58.0
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHH--Hh----c----
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEE--VM----G---- 109 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~e--vL----~---- 109 (223)
..-|.+|=.|.+.| ++.+++...+. .+.+|+-++++++..+...+.++.. |..+.++.+|..+ .+ .
T Consensus 24 l~gk~~lVTGas~g-IG~aia~~la~--~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~ 99 (271)
T 4ibo_A 24 LGGRTALVTGSSRG-LGRAMAEGLAV--AGARILINGTDPSRVAQTVQEFRNV-GHDAEAVAFDVTSESEIIEAFARLDE 99 (271)
T ss_dssp CTTCEEEETTCSSH-HHHHHHHHHHH--TTCEEEECCSCHHHHHHHHHHHHHT-TCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcH-HHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 35688999998877 45666655543 4679999999999999988888887 7778888887642 12 2
Q ss_pred CCCCccEEEEeCC
Q 027409 110 ELKGVDFLVVDCT 122 (223)
Q Consensus 110 ~L~~fDfVFIDa~ 122 (223)
+.++.|.++.-|.
T Consensus 100 ~~g~iD~lv~nAg 112 (271)
T 4ibo_A 100 QGIDVDILVNNAG 112 (271)
T ss_dssp HTCCCCEEEECCC
T ss_pred HCCCCCEEEECCC
Confidence 2247999998775
No 487
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=84.42 E-value=11 Score=32.40 Aligned_cols=77 Identities=12% Similarity=0.104 Sum_probs=46.7
Q ss_pred CeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhh---cCceEEEEecchHHHhcCCCCccEEEE
Q 027409 43 KLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDV---VGWVSEVIVRQAEEVMGELKGVDFLVV 119 (223)
Q Consensus 43 k~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a---~G~~I~li~GdA~evL~~L~~fDfVFI 119 (223)
.+|.=||+ |..+++++...+...-...|+-+|+++++.+.....+.+. .+..+++..+|. +.+ ...|+||+
T Consensus 2 ~kI~VIGa--G~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~---~~aDvVii 75 (309)
T 1hyh_A 2 RKIGIIGL--GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-AAL---ADADVVIS 75 (309)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGG---TTCSEEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHh---CCCCEEEE
Confidence 36888885 5556776655443211147999999998877665544432 011245545664 433 57999999
Q ss_pred eCCCcc
Q 027409 120 DCTSKD 125 (223)
Q Consensus 120 Da~K~~ 125 (223)
=....+
T Consensus 76 av~~~~ 81 (309)
T 1hyh_A 76 TLGNIK 81 (309)
T ss_dssp CCSCGG
T ss_pred ecCCcc
Confidence 775433
No 488
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=84.39 E-value=8.4 Score=33.76 Aligned_cols=74 Identities=15% Similarity=0.031 Sum_probs=48.3
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhh---cCceEEEEe-cchHHHhcCCCCccE
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDV---VGWVSEVIV-RQAEEVMGELKGVDF 116 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a---~G~~I~li~-GdA~evL~~L~~fDf 116 (223)
...+|.=||+ |+.+++++...+...- ..|+-+|+|+++++.....+++. .+...++.. +|- +. +..-|+
T Consensus 3 ~~~kI~VIGa--G~vG~~ia~~la~~g~-~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~a---l~~aD~ 75 (322)
T 1t2d_A 3 PKAKIVLVGS--GMIGGVMATLIVQKNL-GDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DD---LAGADV 75 (322)
T ss_dssp CCCEEEEECC--SHHHHHHHHHHHHTTC-CEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GG---GTTCSE
T ss_pred CCCEEEEECC--CHHHHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HH---hCCCCE
Confidence 3458999997 6777888777665432 24999999999887655555542 022234443 453 43 457899
Q ss_pred EEEeC
Q 027409 117 LVVDC 121 (223)
Q Consensus 117 VFIDa 121 (223)
|++=+
T Consensus 76 Vi~a~ 80 (322)
T 1t2d_A 76 VIVTA 80 (322)
T ss_dssp EEECC
T ss_pred EEEeC
Confidence 99986
No 489
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=84.38 E-value=4.4 Score=34.95 Aligned_cols=79 Identities=6% Similarity=-0.037 Sum_probs=57.7
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCc--eEEEEecchHH------Hhc---
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGW--VSEVIVRQAEE------VMG--- 109 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~--~I~li~GdA~e------vL~--- 109 (223)
.-|.||=.|.+.| ++.+++...+ ..+.+|+.++++++..+.+.+.++.. |. .+.++..|..+ .+.
T Consensus 7 ~~k~vlVTGas~g-IG~~la~~l~--~~G~~Vv~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 82 (319)
T 3ioy_A 7 AGRTAFVTGGANG-VGIGLVRQLL--NQGCKVAIADIRQDSIDKALATLEAE-GSGPEVMGVQLDVASREGFKMAADEVE 82 (319)
T ss_dssp TTCEEEEETTTST-HHHHHHHHHH--HTTCEEEEEESCHHHHHHHHHHHHHH-TCGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEcCCchH-HHHHHHHHHH--HCCCEEEEEECCHHHHHHHHHHHHhc-CCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 4578999998877 4566555444 34779999999999999999888877 65 38888888532 122
Q ss_pred -CCCCccEEEEeCCC
Q 027409 110 -ELKGVDFLVVDCTS 123 (223)
Q Consensus 110 -~L~~fDfVFIDa~K 123 (223)
..+++|.++.-|.-
T Consensus 83 ~~~g~id~lv~nAg~ 97 (319)
T 3ioy_A 83 ARFGPVSILCNNAGV 97 (319)
T ss_dssp HHTCCEEEEEECCCC
T ss_pred HhCCCCCEEEECCCc
Confidence 23478999998863
No 490
>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*
Probab=84.28 E-value=6.1 Score=36.28 Aligned_cols=82 Identities=12% Similarity=0.161 Sum_probs=54.9
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchH------------HHHHHHHHHhhcCceEEEEecchHH-
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERS------------RLAYVKAMYDVVGWVSEVIVRQAEE- 106 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~------------~~~Ar~~~~~a~G~~I~li~GdA~e- 106 (223)
.+.|.+|=.|.+.|+ +.++++|.+....|.+|+.+.++.+. .+..++..++. |..+..+.+|..+
T Consensus 58 ~~gK~aLVTGassGI-G~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~Dvtd~ 135 (418)
T 4eue_A 58 RGPKKVLIVGASSGF-GLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKK-GLVAKNFIEDAFSN 135 (418)
T ss_dssp CCCSEEEEESCSSHH-HHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHT-TCCEEEEESCTTCH
T ss_pred CCCCEEEEECCCcHH-HHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHc-CCcEEEEEeeCCCH
Confidence 568999999999885 45533544545557899888886543 34455556666 7777788888642
Q ss_pred ---------HhcCCCCccEEEEeCCC
Q 027409 107 ---------VMGELKGVDFLVVDCTS 123 (223)
Q Consensus 107 ---------vL~~L~~fDfVFIDa~K 123 (223)
+..+++..|+++.-|.-
T Consensus 136 ~~v~~~v~~i~~~~G~IDiLVnNAG~ 161 (418)
T 4eue_A 136 ETKDKVIKYIKDEFGKIDLFVYSLAA 161 (418)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCcc
Confidence 22234579999887653
No 491
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=84.18 E-value=0.49 Score=41.64 Aligned_cols=63 Identities=13% Similarity=0.077 Sum_probs=49.5
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcC
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGE 110 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~ 110 (223)
.-..||+-=||.| +|+.-|+ ..+-+-+.+|++++..+.|++.++++ +.+.+.+.+||.+++..
T Consensus 252 ~~~~VlDpF~GsG---tt~~aa~---~~gr~~ig~e~~~~~~~~~~~r~~~~-~~~~~~~~~~~~~i~~~ 314 (323)
T 1boo_A 252 PDDLVVDIFGGSN---TTGLVAE---RESRKWISFEMKPEYVAASAFRFLDN-NISEEKITDIYNRILNG 314 (323)
T ss_dssp TTCEEEETTCTTC---HHHHHHH---HTTCEEEEEESCHHHHHHHHGGGSCS-CSCHHHHHHHHHHHHTT
T ss_pred CCCEEEECCCCCC---HHHHHHH---HcCCCEEEEeCCHHHHHHHHHHHHhc-ccchHHHHHHHHHHHcC
Confidence 4457899888877 4533222 23568999999999999999999999 88778889999998764
No 492
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=84.15 E-value=4.6 Score=28.14 Aligned_cols=62 Identities=21% Similarity=0.121 Sum_probs=44.3
Q ss_pred EEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCccEEEEeCCCcc--cHHHHHHhc
Q 027409 71 RHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVDFLVVDCTSKD--FARVLRFAR 134 (223)
Q Consensus 71 ~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fDfVFIDa~K~~--Y~~~f~~~~ 134 (223)
+|.-+|.|+...+.-+..++.. |+.+. ...++.+.+..+ ..+|+|++|..-.. -.++++.++
T Consensus 2 ~ilivdd~~~~~~~l~~~l~~~-g~~v~-~~~~~~~a~~~~~~~~~dlil~D~~l~~~~g~~~~~~l~ 67 (121)
T 2pl1_A 2 RVLVVEDNALLRHHLKVQIQDA-GHQVD-DAEDAKEADYYLNEHIPDIAIVDLGLPDEDGLSLIRRWR 67 (121)
T ss_dssp EEEEECSCHHHHHHHHHHHHHT-TCEEE-EESSHHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHH
T ss_pred eEEEEeCcHHHHHHHHHHHhhc-CCEEE-EeCCHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHH
Confidence 5778899999999999999988 98754 456665655544 36999999986443 234555554
No 493
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=84.14 E-value=4.1 Score=33.99 Aligned_cols=78 Identities=17% Similarity=0.084 Sum_probs=55.8
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHH------Hh----cC
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEE------VM----GE 110 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~e------vL----~~ 110 (223)
.-|.+|=.|.+.| ++.+++...+. .+.+|+.++++++..+...+.++.. |..+.++.+|..+ .+ ..
T Consensus 20 ~~k~vlVTGas~g-IG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 95 (273)
T 1ae1_A 20 KGTTALVTGGSKG-IGYAIVEELAG--LGARVYTCSRNEKELDECLEIWREK-GLNVEGSVCDLLSRTERDKLMQTVAHV 95 (273)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCcch-HHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 4588999998866 45666555443 4679999999999888877778776 7667888887531 11 22
Q ss_pred C-CCccEEEEeCC
Q 027409 111 L-KGVDFLVVDCT 122 (223)
Q Consensus 111 L-~~fDfVFIDa~ 122 (223)
+ +.+|.++.-|.
T Consensus 96 ~~g~id~lv~nAg 108 (273)
T 1ae1_A 96 FDGKLNILVNNAG 108 (273)
T ss_dssp TTSCCCEEEECCC
T ss_pred cCCCCcEEEECCC
Confidence 3 57899988775
No 494
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=84.13 E-value=5.2 Score=32.74 Aligned_cols=78 Identities=19% Similarity=0.162 Sum_probs=53.3
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeC-CchHHHHHHHHHHhhcCceEEEEecchHH------Hhc----
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVP-DERSRLAYVKAMYDVVGWVSEVIVRQAEE------VMG---- 109 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~-d~e~~~~Ar~~~~~a~G~~I~li~GdA~e------vL~---- 109 (223)
.-|++|=.|.+.| ++.+++...+. .+.+|+.++. +++..+...+.++.. |..+.++.+|..+ .+.
T Consensus 3 ~~k~~lVTGas~g-IG~~ia~~l~~--~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~ 78 (246)
T 3osu_A 3 MTKSALVTGASRG-IGRSIALQLAE--EGYNVAVNYAGSKEKAEAVVEEIKAK-GVDSFAIQANVADADEVKAMIKEVVS 78 (246)
T ss_dssp CSCEEEETTCSSH-HHHHHHHHHHH--TTCEEEEEESSCHHHHHHHHHHHHHT-TSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHH--CCCEEEEEeCCCHHHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 4578888888866 45666555443 4678877776 567777777788887 7777888887532 122
Q ss_pred CCCCccEEEEeCC
Q 027409 110 ELKGVDFLVVDCT 122 (223)
Q Consensus 110 ~L~~fDfVFIDa~ 122 (223)
++++.|.++.-|.
T Consensus 79 ~~g~id~lv~nAg 91 (246)
T 3osu_A 79 QFGSLDVLVNNAG 91 (246)
T ss_dssp HHSCCCEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 2247999988775
No 495
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=84.06 E-value=3.5 Score=33.86 Aligned_cols=78 Identities=19% Similarity=0.167 Sum_probs=55.3
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHH--Hh----c----C
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEE--VM----G----E 110 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~e--vL----~----~ 110 (223)
.-|.+|=.|.+.| ++.+++...+. .+.+|+.++++++..+...+.++.. |..+.++.+|..+ .+ . .
T Consensus 6 ~~k~~lVTGas~g-IG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 81 (247)
T 2jah_A 6 QGKVALITGASSG-IGEATARALAA--EGAAVAIAARRVEKLRALGDELTAA-GAKVHVLELDVADRQGVDAAVASTVEA 81 (247)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHH--CCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4578999998866 45666555443 4678999999999888888888776 7667788887532 12 2 1
Q ss_pred CCCccEEEEeCC
Q 027409 111 LKGVDFLVVDCT 122 (223)
Q Consensus 111 L~~fDfVFIDa~ 122 (223)
++++|.++.-|.
T Consensus 82 ~g~id~lv~nAg 93 (247)
T 2jah_A 82 LGGLDILVNNAG 93 (247)
T ss_dssp HSCCSEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 247999988764
No 496
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=84.05 E-value=1.5 Score=30.90 Aligned_cols=62 Identities=10% Similarity=0.162 Sum_probs=45.4
Q ss_pred EEEEEeCCchHHHHHHHHHHhhcCceEEEEecchHHHhcCC--CCccEEEEeCCCcc--cHHHHHHhc
Q 027409 71 RHVCIVPDERSRLAYVKAMYDVVGWVSEVIVRQAEEVMGEL--KGVDFLVVDCTSKD--FARVLRFAR 134 (223)
Q Consensus 71 ~i~TIE~d~e~~~~Ar~~~~~a~G~~I~li~GdA~evL~~L--~~fDfVFIDa~K~~--Y~~~f~~~~ 134 (223)
+|.-+|.++...+.-+..++.. |+.+. ...++.+.+..+ ..+|+|++|..-.. -.++++.++
T Consensus 3 ~ilivdd~~~~~~~l~~~L~~~-~~~v~-~~~~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~ 68 (124)
T 1mb3_A 3 KVLIVEDNELNMKLFHDLLEAQ-GYETL-QTREGLSALSIARENKPDLILMDIQLPEISGLEVTKWLK 68 (124)
T ss_dssp EEEEECSCHHHHHHHHHHHHHT-TCEEE-EESCHHHHHHHHHHHCCSEEEEESBCSSSBHHHHHHHHH
T ss_pred EEEEEcCCHHHHHHHHHHHHHc-CcEEE-EeCCHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHH
Confidence 6888999999999999999998 98844 456776766554 37999999986433 234555543
No 497
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=83.95 E-value=6.1 Score=33.24 Aligned_cols=79 Identities=14% Similarity=0.106 Sum_probs=55.6
Q ss_pred CCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeC-CchHHHHHHHHHHhhcCceEEEEecchHH------HhcC---
Q 027409 41 NAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVP-DERSRLAYVKAMYDVVGWVSEVIVRQAEE------VMGE--- 110 (223)
Q Consensus 41 ~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~-d~e~~~~Ar~~~~~a~G~~I~li~GdA~e------vL~~--- 110 (223)
.-|.+|=.|.+.| ++.+++...+. .+.+|+.+++ +++..+...+.+... |..+.++.+|..+ .+.+
T Consensus 28 ~~k~~lVTGas~G-IG~aia~~la~--~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~ 103 (280)
T 4da9_A 28 ARPVAIVTGGRRG-IGLGIARALAA--SGFDIAITGIGDAEGVAPVIAELSGL-GARVIFLRADLADLSSHQATVDAVVA 103 (280)
T ss_dssp CCCEEEEETTTSH-HHHHHHHHHHH--TTCEEEEEESCCHHHHHHHHHHHHHT-TCCEEEEECCTTSGGGHHHHHHHHHH
T ss_pred CCCEEEEecCCCH-HHHHHHHHHHH--CCCeEEEEeCCCHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 4578999998877 45666655543 4678988885 778777777788877 7668888888643 1222
Q ss_pred -CCCccEEEEeCCC
Q 027409 111 -LKGVDFLVVDCTS 123 (223)
Q Consensus 111 -L~~fDfVFIDa~K 123 (223)
+++.|.++.-|.-
T Consensus 104 ~~g~iD~lvnnAg~ 117 (280)
T 4da9_A 104 EFGRIDCLVNNAGI 117 (280)
T ss_dssp HHSCCCEEEEECC-
T ss_pred HcCCCCEEEECCCc
Confidence 2479999988754
No 498
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=83.95 E-value=4.9 Score=33.32 Aligned_cols=79 Identities=16% Similarity=0.162 Sum_probs=57.0
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCc-eEEEEecchHH--Hh----c---
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGW-VSEVIVRQAEE--VM----G--- 109 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~-~I~li~GdA~e--vL----~--- 109 (223)
..-|++|=.|.+.| ++.+++...+. .+.+|+-++++++..+.+.+.+++. |- .+.++..|..+ .+ .
T Consensus 8 l~~k~vlVTGas~g-IG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~ 83 (262)
T 3pk0_A 8 LQGRSVVVTGGTKG-IGRGIATVFAR--AGANVAVAGRSTADIDACVADLDQL-GSGKVIGVQTDVSDRAQCDALAGRAV 83 (262)
T ss_dssp CTTCEEEETTCSSH-HHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHTT-SSSCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcH-HHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhh-CCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 34588998888866 45666555443 4679999999999999888888887 63 38888888642 12 2
Q ss_pred -CCCCccEEEEeCC
Q 027409 110 -ELKGVDFLVVDCT 122 (223)
Q Consensus 110 -~L~~fDfVFIDa~ 122 (223)
++++.|.++.-|.
T Consensus 84 ~~~g~id~lvnnAg 97 (262)
T 3pk0_A 84 EEFGGIDVVCANAG 97 (262)
T ss_dssp HHHSCCSEEEECCC
T ss_pred HHhCCCCEEEECCC
Confidence 2247999998775
No 499
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=83.90 E-value=6.5 Score=33.33 Aligned_cols=79 Identities=13% Similarity=0.107 Sum_probs=55.5
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCC------------chHHHHHHHHHHhhcCceEEEEecchHH-
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPD------------ERSRLAYVKAMYDVVGWVSEVIVRQAEE- 106 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d------------~e~~~~Ar~~~~~a~G~~I~li~GdA~e- 106 (223)
..-|.+|=.|.+.|. +.+++...+. .+.+|+.++++ ++..+.+.+.++.. |..+.++..|..+
T Consensus 26 l~gk~~lVTGas~GI-G~aia~~la~--~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~ 101 (299)
T 3t7c_A 26 VEGKVAFITGAARGQ-GRSHAITLAR--EGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL-GRRIIASQVDVRDF 101 (299)
T ss_dssp TTTCEEEEESTTSHH-HHHHHHHHHH--TTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT-TCCEEEEECCTTCH
T ss_pred cCCCEEEEECCCCHH-HHHHHHHHHH--CCCEEEEEecccccccccccccCHHHHHHHHHHHHhc-CCceEEEECCCCCH
Confidence 456889999998774 5666555543 47899999987 67777777777777 7668888887642
Q ss_pred -----Hhc----CCCCccEEEEeCC
Q 027409 107 -----VMG----ELKGVDFLVVDCT 122 (223)
Q Consensus 107 -----vL~----~L~~fDfVFIDa~ 122 (223)
.+. ++++.|.++.-|.
T Consensus 102 ~~v~~~~~~~~~~~g~iD~lv~nAg 126 (299)
T 3t7c_A 102 DAMQAAVDDGVTQLGRLDIVLANAA 126 (299)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCC
Confidence 122 2247999887764
No 500
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=83.90 E-value=2.7 Score=34.13 Aligned_cols=80 Identities=18% Similarity=0.141 Sum_probs=56.0
Q ss_pred cCCCeEEEEccCcchHHHHHHHHHhcCCCCcEEEEEeCCchHHHHHHHHHHhhcCce-EEEEecch--------HHHhcC
Q 027409 40 WNAKLIVEAWTHGGPITTSIGLAIAARHTCARHVCIVPDERSRLAYVKAMYDVVGWV-SEVIVRQA--------EEVMGE 110 (223)
Q Consensus 40 ~~ak~ILEIGT~~Gys~Stl~la~A~~~~~g~i~TIE~d~e~~~~Ar~~~~~a~G~~-I~li~GdA--------~evL~~ 110 (223)
.+-|.+|=.|.+.| .+.+++...+ ..+.+|+.++++++..+...+.++.. +.. +.++..|. .+.+..
T Consensus 12 l~~k~vlITGas~g-IG~~ia~~l~--~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~d~d~~~~~~~~~~~~~ 87 (247)
T 3i1j_A 12 LKGRVILVTGAARG-IGAAAARAYA--AHGASVVLLGRTEASLAEVSDQIKSA-GQPQPLIIALNLENATAQQYRELAAR 87 (247)
T ss_dssp TTTCEEEESSTTSH-HHHHHHHHHH--HTTCEEEEEESCHHHHHHHHHHHHHT-TSCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCh-HHHHHHHHHH--HCCCEEEEEecCHHHHHHHHHHHHhc-CCCCceEEEeccccCCHHHHHHHHHH
Confidence 34578999998877 4566555544 34679999999999999999989887 644 66666654 112222
Q ss_pred ----CCCccEEEEeCCC
Q 027409 111 ----LKGVDFLVVDCTS 123 (223)
Q Consensus 111 ----L~~fDfVFIDa~K 123 (223)
++++|.++.-|.-
T Consensus 88 ~~~~~g~id~lv~nAg~ 104 (247)
T 3i1j_A 88 VEHEFGRLDGLLHNASI 104 (247)
T ss_dssp HHHHHSCCSEEEECCCC
T ss_pred HHHhCCCCCEEEECCcc
Confidence 2479999988763
Done!