BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027411
(223 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SLQ8|PSBP_CUCSA Oxygen-evolving enhancer protein 2, chloroplastic OS=Cucumis
sativus GN=PSBP PE=2 SV=1
Length = 263
Score = 265 bits (676), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 131/162 (80%), Positives = 143/162 (88%), Gaps = 3/162 (1%)
Query: 1 MASTQCFLHHHALSTTPARTSSSQRHVSNIK-PTQIVCRAQKQA-VQEDDGSAVSRRLAL 58
MAST CFLHHHAL T AR+SSS R + K P +VCRAQKQ QE++G VSRRLAL
Sbjct: 1 MASTSCFLHHHAL-TAAARSSSSPRQAALPKSPQLLVCRAQKQQPAQEEEGGVVSRRLAL 59
Query: 59 TVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREF 118
TVLIGAAA+GSKVSPADAAYGE+ANVFGKPK+NTD+LPY+GDGFKLSIPSKWNPSKEREF
Sbjct: 60 TVLIGAAALGSKVSPADAAYGEAANVFGKPKSNTDYLPYSGDGFKLSIPSKWNPSKEREF 119
Query: 119 PGQVLRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKV 160
PGQVLRYEDNFDSNSN+SVII PTDKKSI D+GSPEEFLSKV
Sbjct: 120 PGQVLRYEDNFDSNSNLSVIINPTDKKSIKDFGSPEEFLSKV 161
>sp|Q7DM39|PSBP1_TOBAC Oxygen-evolving enhancer protein 2-1, chloroplastic OS=Nicotiana
tabacum GN=PSBP1 PE=3 SV=2
Length = 268
Score = 261 bits (667), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 131/166 (78%), Positives = 149/166 (89%), Gaps = 6/166 (3%)
Query: 1 MASTQCFLHHHALSTTPARTS---SSQRHVSNIKPTQIVCRAQKQAV-QEDDGSAV--SR 54
MASTQCFLH HALS++ ART+ SSQR+VS++KP Q+VCRAQKQ+ QEDDG++V SR
Sbjct: 1 MASTQCFLHQHALSSSAARTTSSVSSQRYVSSLKPNQLVCRAQKQSSPQEDDGNSVVVSR 60
Query: 55 RLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSK 114
RLALTVLIGAAA+GSKVSPADAAYGE+ANVFGKPK NTDFL YNGDGFKL +P+KWNPSK
Sbjct: 61 RLALTVLIGAAAIGSKVSPADAAYGEAANVFGKPKENTDFLAYNGDGFKLQVPAKWNPSK 120
Query: 115 EREFPGQVLRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKV 160
E EFPGQVLRYEDNFDS SN+ V +TPTDKKSITDYGSPEEFL++V
Sbjct: 121 EVEFPGQVLRYEDNFDSTSNLIVTVTPTDKKSITDYGSPEEFLTQV 166
>sp|P12302|PSBP_SPIOL Oxygen-evolving enhancer protein 2, chloroplastic OS=Spinacia
oleracea GN=PSBP PE=1 SV=1
Length = 267
Score = 255 bits (651), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 123/165 (74%), Positives = 144/165 (87%), Gaps = 5/165 (3%)
Query: 1 MASTQCFLHHHALSTTPA--RTSSSQRHVS-NIKPTQIVCRAQKQAVQEDD--GSAVSRR 55
MAST CFLHHHA ++PA R S++QR+ + +IKP QIVC+AQKQ E + S VSRR
Sbjct: 1 MASTACFLHHHAAISSPAAGRGSAAQRYQAVSIKPNQIVCKAQKQDDNEANVLNSGVSRR 60
Query: 56 LALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKE 115
LALTVLIGAAAVGSKVSPADAAYGE+ANVFGKPK NT+F+PYNGDGFKL +PSKWNPSKE
Sbjct: 61 LALTVLIGAAAVGSKVSPADAAYGEAANVFGKPKKNTEFMPYNGDGFKLLVPSKWNPSKE 120
Query: 116 REFPGQVLRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKV 160
+EFPGQVLRYEDNFD+ SN+SV++ PTDKKSITD+GSPE+FLS+V
Sbjct: 121 KEFPGQVLRYEDNFDATSNLSVLVQPTDKKSITDFGSPEDFLSQV 165
>sp|P93566|PSBP_SOLTU Oxygen-evolving enhancer protein 2, chloroplastic OS=Solanum
tuberosum GN=PSBP PE=2 SV=1
Length = 260
Score = 254 bits (650), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 124/160 (77%), Positives = 138/160 (86%), Gaps = 5/160 (3%)
Query: 2 ASTQCFLH-HHALSTTPARTSSSQRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLALTV 60
ASTQCFLH +HAL ++PARTSS V + KP Q++CRAQKQ + +AVSRRLALT+
Sbjct: 3 ASTQCFLHQYHALRSSPARTSS----VPSPKPNQLICRAQKQDDANNTSNAVSRRLALTL 58
Query: 61 LIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPG 120
LIG AA+GSKVSPADAAYGE+ANVFGKPK NTDFLPYNGDGFKL IP+KWNPSKE EFPG
Sbjct: 59 LIGTAAIGSKVSPADAAYGEAANVFGKPKENTDFLPYNGDGFKLQIPAKWNPSKEIEFPG 118
Query: 121 QVLRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKV 160
QVLRYEDNFDS SN+ V +TPTDKKSITDYGSPEEFLSKV
Sbjct: 119 QVLRYEDNFDSTSNLMVAVTPTDKKSITDYGSPEEFLSKV 158
>sp|P16059|PSBP_PEA Oxygen-evolving enhancer protein 2, chloroplastic OS=Pisum sativum
GN=PSBP PE=1 SV=1
Length = 259
Score = 254 bits (648), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 125/160 (78%), Positives = 135/160 (84%), Gaps = 3/160 (1%)
Query: 1 MASTQCFLHHHALSTTPARTSSSQRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLALTV 60
MASTQCFLHH TTP RT S QR V KP IVC+AQKQ D + VSRRLAL+V
Sbjct: 1 MASTQCFLHHQYAITTPTRTLS-QRQVVTTKPNHIVCKAQKQDDVVD--AVVSRRLALSV 57
Query: 61 LIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPG 120
LIGAAAVGSKVSPADAAYGE+ANVFGK KTNTD+LPYNGDGFKL +P+KWNPSKEREFPG
Sbjct: 58 LIGAAAVGSKVSPADAAYGEAANVFGKAKTNTDYLPYNGDGFKLLVPAKWNPSKEREFPG 117
Query: 121 QVLRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKV 160
QVLRYEDNFD+ SNVSV++ TDKKSITDYGSPEEFLSKV
Sbjct: 118 QVLRYEDNFDATSNVSVLVQTTDKKSITDYGSPEEFLSKV 157
>sp|P29795|PSBP_SOLLC Oxygen-evolving enhancer protein 2, chloroplastic OS=Solanum
lycopersicum GN=PSBP PE=2 SV=1
Length = 258
Score = 253 bits (646), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 126/162 (77%), Positives = 140/162 (86%), Gaps = 11/162 (6%)
Query: 2 ASTQCFLH-HHALSTTPARTSSSQRHVSNIKPTQIVCRAQKQAVQEDDGS--AVSRRLAL 58
ASTQCFLH +HAL ++PARTSS VS+ KP Q++CRAQKQ DD S AVSRRLAL
Sbjct: 3 ASTQCFLHQYHALRSSPARTSS----VSSPKPNQLICRAQKQ----DDASNAAVSRRLAL 54
Query: 59 TVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREF 118
T+LIG AA+GSKVSPADAAYGE+ANVFGKPK NTDFLPYNGDGFKL +P+KWNPSKE E+
Sbjct: 55 TLLIGTAAIGSKVSPADAAYGEAANVFGKPKENTDFLPYNGDGFKLQVPAKWNPSKEVEY 114
Query: 119 PGQVLRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKV 160
PGQVLRYEDNFDS SN+ V +TPTDKKSITDYGSPEEFLSKV
Sbjct: 115 PGQVLRYEDNFDSTSNLIVAVTPTDKKSITDYGSPEEFLSKV 156
>sp|P18212|PSBP2_TOBAC Oxygen-evolving enhancer protein 2-2, chloroplastic OS=Nicotiana
tabacum GN=PSBP2 PE=1 SV=2
Length = 265
Score = 248 bits (634), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 127/164 (77%), Positives = 142/164 (86%), Gaps = 5/164 (3%)
Query: 1 MASTQCFLHHHALSTTPARTSSSQRHVSNIKPTQI-VCRAQKQ-AVQEDD--GSAVSRRL 56
MASTQCFLHHHALST PART + V ++KP Q+ VCRAQKQ A QED+ +VSRRL
Sbjct: 1 MASTQCFLHHHALST-PARTPLVRSIVPSLKPNQLLVCRAQKQSAPQEDNVNSVSVSRRL 59
Query: 57 ALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKER 116
ALTVLIGAAAVGSKVSPADAAYGE+ANVFGKPKT+TDF YNGDGFKL IPSKWNP+KE
Sbjct: 60 ALTVLIGAAAVGSKVSPADAAYGEAANVFGKPKTDTDFQTYNGDGFKLQIPSKWNPNKEV 119
Query: 117 EFPGQVLRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKV 160
E+PGQVLR+EDNFD+ SNV V ITPTDKKSITD+GSPE+FLS+V
Sbjct: 120 EYPGQVLRFEDNFDATSNVIVAITPTDKKSITDFGSPEQFLSQV 163
>sp|Q42029|PSBP1_ARATH Oxygen-evolving enhancer protein 2-1, chloroplastic OS=Arabidopsis
thaliana GN=PSBP1 PE=1 SV=2
Length = 263
Score = 242 bits (618), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 122/163 (74%), Positives = 144/163 (88%), Gaps = 5/163 (3%)
Query: 1 MASTQCFLHHHALSTTPARTSSS---QRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLA 57
MA + CFLH AL+++ AR+SSS QRHVS KP QI+C+AQ+ EDD SAVSRRLA
Sbjct: 1 MAYSACFLHQSALASSAARSSSSSSSQRHVSLSKPVQIICKAQQS--HEDDNSAVSRRLA 58
Query: 58 LTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKERE 117
LT+L+GAAAVGSKVSPADAAYGE+ANVFGKPKTNTDFLPYNGDGFK+ +P+KWNPSKE E
Sbjct: 59 LTLLVGAAAVGSKVSPADAAYGEAANVFGKPKTNTDFLPYNGDGFKVQVPAKWNPSKEIE 118
Query: 118 FPGQVLRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKV 160
+PGQVLR+EDNFD+ SN++V++TPTDKKSITDYGSPEEFLS+V
Sbjct: 119 YPGQVLRFEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQV 161
>sp|Q04127|PSBP3_TOBAC Oxygen-evolving enhancer protein 2-3, chloroplastic OS=Nicotiana
tabacum GN=PSBP3 PE=2 SV=1
Length = 266
Score = 241 bits (614), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 123/165 (74%), Positives = 141/165 (85%), Gaps = 6/165 (3%)
Query: 1 MASTQCFLHHHALSTTPARTSSSQRHVSNIKPTQI-VCRAQKQ--AVQEDD--GSAVSRR 55
MASTQCFLHHHALST PARTS + V ++K Q+ VCRAQ + A Q+D+ +VSRR
Sbjct: 1 MASTQCFLHHHALST-PARTSLVRGIVPSLKSNQLLVCRAQNKQSAPQQDNVNSVSVSRR 59
Query: 56 LALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKE 115
LALT+LIGAAAVGSKVSPADAAYGE+ANVFGKPKT+TDF YNGDGFKL IPSKWNP+KE
Sbjct: 60 LALTLLIGAAAVGSKVSPADAAYGEAANVFGKPKTDTDFQTYNGDGFKLQIPSKWNPNKE 119
Query: 116 REFPGQVLRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKV 160
E+PGQVLR+EDNFD+ SNV V ITPTDKKSITD+GSPE+FLS+V
Sbjct: 120 VEYPGQVLRFEDNFDATSNVIVAITPTDKKSITDFGSPEQFLSQV 164
>sp|O49080|PSBP_FRIAG Oxygen-evolving enhancer protein 2, chloroplastic OS=Fritillaria
agrestis GN=PSBP PE=2 SV=1
Length = 264
Score = 238 bits (606), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 118/163 (72%), Positives = 135/163 (82%), Gaps = 4/163 (2%)
Query: 1 MASTQCFLHHHALSTTPARTSS--SQRHVSNIKPTQIVCRAQKQA-VQEDDGSAVSRRLA 57
MAS+ CFL HHA ST PA TS S R V IKP+Q++CRAQK + E+ +AVSRRLA
Sbjct: 1 MASSACFLLHHAPST-PATTSRTPSHRLVPTIKPSQLICRAQKSSDTDENSSTAVSRRLA 59
Query: 58 LTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKERE 117
LT+LIG+AAVG+K++PA+AAYGE+ANVFGK KTNTDFLPY GDGF L IP+KWNPSKE E
Sbjct: 60 LTILIGSAAVGTKIAPANAAYGEAANVFGKAKTNTDFLPYTGDGFNLLIPAKWNPSKEVE 119
Query: 118 FPGQVLRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKV 160
FPGQVLRYEDNFD SNVSV +TPT KKSITDYG+PEEFLS V
Sbjct: 120 FPGQVLRYEDNFDVTSNVSVTVTPTSKKSITDYGTPEEFLSTV 162
>sp|P11594|PSBP_SINAL Oxygen-evolving enhancer protein 2, chloroplastic OS=Sinapis alba
GN=PSBP PE=2 SV=2
Length = 260
Score = 221 bits (564), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 110/163 (67%), Positives = 138/163 (84%), Gaps = 8/163 (4%)
Query: 1 MASTQCFLHHHALSTTPARTSSS---QRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLA 57
MA + CFLH AL+++ AR+S S QR+VS +++VC+AQ+ E+D S VSRRLA
Sbjct: 1 MAYSACFLHQSALASSTARSSPSSSSQRYVS---ISKLVCKAQQ--THEEDNSTVSRRLA 55
Query: 58 LTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKERE 117
LT+L+GAAAVGSKVSPADAAYGE+ANVFGKPK NTDF Y+GDGF++ +P+KWNPS+E E
Sbjct: 56 LTLLVGAAAVGSKVSPADAAYGEAANVFGKPKKNTDFTAYSGDGFQVQVPAKWNPSREVE 115
Query: 118 FPGQVLRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKV 160
+PGQVLRYEDNFD+ SN++V++TPTDKKSITDYGSPEEFLS+V
Sbjct: 116 YPGQVLRYEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQV 158
>sp|P85189|PSBP_HELAN Oxygen-evolving enhancer protein 2, chloroplastic OS=Helianthus
annuus GN=PSBP PE=1 SV=1
Length = 263
Score = 210 bits (534), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 110/166 (66%), Positives = 134/166 (80%), Gaps = 11/166 (6%)
Query: 1 MASTQCFLHHHALSTTPARTSSSQ------RHVSNIKPTQIVCRAQKQAVQEDDGSAVSR 54
MA+ CF HALST PAR+SSS R + IKP Q++ R+QK+ + +A+SR
Sbjct: 1 MAAASCF---HALST-PARSSSSSLQSSSSRLPAPIKPNQLIIRSQKREETATNDAAISR 56
Query: 55 RLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSK 114
RLALTVLIGAAAVG+KVSPADAAYGE+ANVFGK K+ T+F Y G GFKLS+P+KWNPSK
Sbjct: 57 RLALTVLIGAAAVGTKVSPADAAYGEAANVFGKQKS-TEFSQYTGPGFKLSVPAKWNPSK 115
Query: 115 EREFPGQVLRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKV 160
E E+PGQVLRYEDNFD+ SN++V++TPTDKK+ITDYG+PEEFLSKV
Sbjct: 116 EVEYPGQVLRYEDNFDTTSNLAVMVTPTDKKAITDYGAPEEFLSKV 161
>sp|Q40407|PSBP_NARPS Oxygen-evolving enhancer protein 2, chloroplastic OS=Narcissus
pseudonarcissus GN=PSBP PE=2 SV=1
Length = 265
Score = 209 bits (532), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 106/170 (62%), Positives = 123/170 (72%), Gaps = 17/170 (10%)
Query: 1 MASTQCFLHHHA-------LSTTPA---RTSSSQRHVSNIKPTQIVCRAQKQAVQEDDGS 50
MAST CFLHHHA LS T + R Q H + ++ + C + A+
Sbjct: 1 MASTACFLHHHAPSPATSNLSRTRSATNRDEQQQEHSARLQSPEADCATENDAL------ 54
Query: 51 AVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKW 110
+SRRLALT+LIG AA+GS+VS ADAAYGESANVFGKPKTNTDF GDGFK+ IPSKW
Sbjct: 55 -LSRRLALTILIGGAALGSRVSAADAAYGESANVFGKPKTNTDFQTVTGDGFKILIPSKW 113
Query: 111 NPSKEREFPGQVLRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKV 160
NPSKE EFPGQVLRYEDNFD+ SNV V++ PTDKKSI DYGSPE+FLS+V
Sbjct: 114 NPSKEVEFPGQVLRYEDNFDTTSNVGVMVNPTDKKSIKDYGSPEQFLSQV 163
>sp|Q96334|PSBP_BRAJU Oxygen-evolving enhancer protein 2, chloroplastic (Fragment)
OS=Brassica juncea GN=PSBP PE=2 SV=1
Length = 217
Score = 202 bits (514), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 92/115 (80%), Positives = 107/115 (93%)
Query: 46 EDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLS 105
EDD S VSRRLALT+L+GAAAVGSKVSPADAAYGE+ANVFGKPKTNTDF NGDGF++
Sbjct: 1 EDDTSTVSRRLALTLLVGAAAVGSKVSPADAAYGEAANVFGKPKTNTDFTAINGDGFQVQ 60
Query: 106 IPSKWNPSKEREFPGQVLRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKV 160
+P+KWNPS+E E+PGQVLRYEDNFD+ SN++V++TPTDKKSITDYGSPEEFLS+V
Sbjct: 61 VPAKWNPSREVEYPGQVLRYEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQV 115
>sp|Q00434|PSBP_WHEAT Oxygen-evolving enhancer protein 2, chloroplastic OS=Triticum
aestivum GN=PSBP PE=2 SV=1
Length = 258
Score = 172 bits (437), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 105/162 (64%), Positives = 124/162 (76%), Gaps = 7/162 (4%)
Query: 1 MASTQCFLHHHALSTTPARTSSSQRHVSNIKPTQI-VCRAQKQAVQEDDGSAV-SRRLAL 58
MAST CFLH + AR ++S R + TQ+ VC+AQK D + V SRR AL
Sbjct: 1 MASTSCFLHQ-----STARLAASARPAPAVGRTQLFVCKAQKNDEAASDAAVVTSRRAAL 55
Query: 59 TVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREF 118
++L GAAA+ KVSPA AAYGE+ANVFGK K NTDF+ Y+G+GFKL IP+KWNPSKEREF
Sbjct: 56 SLLAGAAAIAVKVSPAAAAYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREF 115
Query: 119 PGQVLRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKV 160
PGQVLRYEDNFD+ SN+SVII PT KK+ITDYGSPEEFLS+V
Sbjct: 116 PGQVLRYEDNFDATSNLSVIINPTTKKTITDYGSPEEFLSQV 157
>sp|P11471|PSBP_CHLRE Oxygen-evolving enhancer protein 2, chloroplastic OS=Chlamydomonas
reinhardtii GN=PSBP PE=2 SV=1
Length = 245
Score = 128 bits (321), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/160 (48%), Positives = 101/160 (63%), Gaps = 19/160 (11%)
Query: 1 MASTQCFLHHHALSTTPARTSSSQRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLALTV 60
MA+ C + A + P +S+R + +V RA GS VSRR AL
Sbjct: 1 MATALC---NKAFAAAPVARPASRR-------SAVVVRAS--------GSDVSRRAALAG 42
Query: 61 LIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPG 120
GAAA+ S SPA+AAYG+SANVFGK + F+PY GDGF L +P+KWNPSKE +FPG
Sbjct: 43 FAGAAALVSS-SPANAAYGDSANVFGKVTNKSGFVPYAGDGFALLLPAKWNPSKENDFPG 101
Query: 121 QVLRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKV 160
+LRYEDNFD+ +N+ VI TDKK+I D+GS ++FL V
Sbjct: 102 VILRYEDNFDAVNNLVVIAQDTDKKAIADFGSQDKFLESV 141
>sp|O49344|PSBP2_ARATH Putative oxygen-evolving enhancer protein 2-2 OS=Arabidopsis
thaliana GN=PSBP2 PE=5 SV=3
Length = 125
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/23 (86%), Positives = 23/23 (100%)
Query: 138 IITPTDKKSITDYGSPEEFLSKV 160
+ITPTDKKSITDYGSPE+FLS+V
Sbjct: 1 MITPTDKKSITDYGSPEQFLSQV 23
>sp|P83687|PSBP_EUGGR Oxygen-evolving enhancer protein 2 (Fragment) OS=Euglena gracilis
GN=PSBP PE=1 SV=1
Length = 30
Score = 35.0 bits (79), Expect = 0.38, Method: Composition-based stats.
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 77 AYGESANVFGKPKTNTDFLPYNGDGF 102
AYGE ANVFGK K F +GDG+
Sbjct: 1 AYGEGANVFGKRKETDQFFEISGDGW 26
>sp|Q8VY52|PPD2_ARATH PsbP domain-containing protein 2, chloroplastic OS=Arabidopsis
thaliana GN=PPD2 PE=1 SV=1
Length = 232
Score = 33.9 bits (76), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 100 DGFKLSIPSKWNPSKEREFPGQVLRYEDNFDSNSNVSVIITPTDKKSITDYGSPE 154
+GF L IPS + + E G +E+ + ++N+ V+++P KS+ +GSP+
Sbjct: 83 NGFTLLIPSSYT---KVEKAGANALFEELNNGSNNIGVVVSPVRIKSLDQFGSPQ 134
>sp|P82538|PPL1_ARATH PsbP-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=PPL1
PE=1 SV=1
Length = 230
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 98 NGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDSNSNVSVIITPTDKKSITDYGSPEE 155
N D + P W +E GQ Y+D + +VSV + PT K++I ++G P++
Sbjct: 87 NKDAYAFLYPFGW---QEVVIEGQDKVYKDVIEPLESVSVNLVPTSKQTIKEFGPPKQ 141
>sp|P80660|PSBP1_PHYPA Oxygen-evolving enhancer protein 2 (Fragments) OS=Physcomitrella
patens subsp. patens PE=1 SV=1
Length = 43
Score = 33.5 bits (75), Expect = 1.2, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 12/52 (23%)
Query: 89 KTNTDFLPYNGDGFKLSIP---SKWNPSKEREFPGQVLRYEDNFDSNSNVSV 137
K T F P+ G+GF L +P +++ P + + EDNFD+ +N+ V
Sbjct: 1 KKQTGFTPFIGNGFSLDVPXSITEYGPXE---------KXEDNFDATNNLFV 43
>sp|Q8TYT7|PYRG_METKA CTP synthase OS=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM
9639 / NBRC 100938) GN=pyrG PE=3 SV=1
Length = 535
Score = 32.7 bits (73), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 9 HHHALSTTPARTSSSQRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLAL 58
H H L T P + S + I+P IVCR ++ DDG V R++AL
Sbjct: 182 HVHELKTKPTQHSVKELRSLGIQPDAIVCRCERPL---DDG--VKRKIAL 226
>sp|Q9VKB9|RBGPR_DROME Rab3 GTPase-activating protein regulatory subunit OS=Drosophila
melanogaster GN=rab3-GAP PE=1 SV=2
Length = 1341
Score = 31.6 bits (70), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 51/132 (38%), Gaps = 15/132 (11%)
Query: 98 NGDGFKLSIPSKWNPSKEREFPGQVLRY---EDNFDSNSNVSVIITPTDKKSITDYGSPE 154
+G G + +KW S + P +VL E+ D S V + PT + D S E
Sbjct: 870 SGKGIVTELTAKWLISAQLH-PSKVLEISPPENELDDESKVKIKDEPTKESVDEDAESEE 928
Query: 155 --EFLSKVYCGSFIAVTIIIHLWINFRWTTCWENKPIPAKLRLRVVSTLMLWQQLTSW-- 210
E +VY S A I+ R P L V+ +LM WQ + W
Sbjct: 929 DLEMAKEVYAASKEAHEPILERLALLR-------AHFPFSLESGVLLSLMSWQYMVQWSK 981
Query: 211 RLQSDHHTTSCL 222
+L S H + L
Sbjct: 982 QLSSLDHLKAAL 993
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.130 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,130,947
Number of Sequences: 539616
Number of extensions: 3388873
Number of successful extensions: 6825
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 6778
Number of HSP's gapped (non-prelim): 28
length of query: 223
length of database: 191,569,459
effective HSP length: 113
effective length of query: 110
effective length of database: 130,592,851
effective search space: 14365213610
effective search space used: 14365213610
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)